Download allele sequences

Select loci by scheme | Alphabetical list | All loci by scheme

MLST (Oxford)

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Full name/product Curator(s) Last updated
OxfgltA DNA173Fixed: 484 bp 484484H. Wisplinghoff2021-11-04
OxfgyrB DNA260Fixed: 457 bp 457457H. Wisplinghoff2021-12-13
OxfgdhB DNA285Fixed: 344 bp 344345H. Wisplinghoff2021-12-10
OxfrecA DNA178Fixed: 371 bp 371371H. Wisplinghoff2021-12-13
Oxfcpn60 DNA191Fixed: 421 bp 421421H. Wisplinghoff2021-12-13
Oxfgpi DNA428Fixed: 305 bp 305305H. Wisplinghoff2021-12-16
OxfrpoD DNA219Fixed: 513 bp 510519H. Wisplinghoff2021-12-10

MLST (Pasteur)

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Full name/product Curator(s) Last updated
Pascpn60 DNA470Fixed: 405 bp 40540560 KDa chaperoneS. Brisse, V. Passet, P. Villalon, R. Zarrilli2022-01-07
PasfusA DNA405Fixed: 633 bp 633633Elongation factor EF-GS. Brisse, V. Passet, P. Villalon, R. Zarrilli2022-01-10
PasgltA DNA409Fixed: 483 bp 483483Citrate synthaseS. Brisse, V. Passet, P. Villalon, R. Zarrilli2022-01-18
PaspyrG DNA246Fixed: 297 bp 297297CTP synthaseS. Brisse, V. Passet, P. Villalon, R. Zarrilli2022-01-07
PasrecA DNA453Fixed: 372 bp 372372RecA ATPaseS. Brisse, V. Passet, P. Villalon, R. Zarrilli2022-01-07
PasrplB DNA253Fixed: 330 bp 33033050S ribosomal protein L2S. Brisse, V. Passet, P. Villalon, R. Zarrilli2022-01-07
PasrpoB DNA421Fixed: 456 bp 456456RNA polymerase beta subunitS. Brisse, V. Passet, P. Villalon, R. Zarrilli2022-01-07

Other loci

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Full name/product Curator(s) Last updated
ampC DNA81Variable: (1152 min; 1206 max) 11521167AmpC-type β-lactamaseN. Karah2021-08-24
AmpC_peptide peptide165Variable: (383 min; 401 max) 381401AmpC-type β-lactamaseN. Karah2019-02-19

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