Search or browse database

Enter search criteria or leave blank to browse all records. Modify form parameters to filter or enter a list of values.

Isolate provenance/primary metadata fields

Filters

Publication:
cgMLST profiles:
MLST profiles:
Include old record versions

Add filter: Add

Display/sort options

Order by:
Display: records per page

Action Reset

Modify form parameters

Click to add or remove additional query terms:

Provenance fields
Allele designations/scheme field values
Allele designation counts
Allele designation status
Annotation status
Sequence bin
Tagged sequence counts
Tagged sequence status
Attribute values list
Filters

844 records returned (1 - 25 displayed). Click the hyperlinks for detailed information.

Isolate fields										MLST
id	isolate	aliases	country	travel history	travel region	year	species	source	disease	ace	gltB	gmhD	lepA	lipA	narK	ndh	ST
13	D4899/303	2002721171; VEN1976	Venezuela				Burkholderia pseudomallei	human		1	1	13	1	5	1	1	12
19	Ln34170	71	Malaysia				Burkholderia pseudomallei	human		1	2	3	1	1	1	1	17
20	AB2056		Kenya				Burkholderia pseudomallei	unknown		1	2	3	2	1	1	1	18
47	Ln29564	72	Malaysia				Burkholderia pseudomallei	human		1	4	12	1	1	4	1	34
48	Ln31348	73	Malaysia				Burkholderia pseudomallei	human		1	4	12	1	1	4	1	34
71	SID 3811	SID 3811/99	Bangladesh			1999	Burkholderia pseudomallei	human		1	12	10	2	1	2	1	43
73	NCTC 8016	5	Australia			1949	Burkholderia pseudomallei	animal		2	2	13	2	2	2	2	96
77	SID 3783	SID 3783/99	Malaysia			1999	Burkholderia pseudomallei	human		3	1	2	1	1	3	3	46
84	Hainan 106	Hainan106	China				Burkholderia pseudomallei	unknown		3	1	2	1	1	4	3	50
96	SID 2889	SID 2889/99	Bangladesh			1999	Burkholderia pseudomallei	human		3	1	4	1	1	4	1	56
98	MK1900	16	Philippines			1990	Burkholderia pseudomallei	animal		3	1	5	1	1	1	1	57
107	MK441	13	Philippines			1990	Burkholderia pseudomallei	animal		3	3	4	1	3	1	1	62
130	SID 4717	SID 4717	Unknown			1999	Burkholderia pseudomallei	human		4	1	3	2	1	4	1	71
133	521	9	Pakistan			1988	Burkholderia pseudomallei	human		4	1	4	1	1	2	1	72
211	MSHR0099	MSHR99	Australia			1991	Burkholderia pseudomallei	human		1	17	13	4	15	22	1	135
212	MSHR0114	MSHR114	Australia			1991	Burkholderia pseudomallei	human		1	4	23	2	1	8	1	121
213	MSHR0116	MSHR116	Australia			1992	Burkholderia pseudomallei	human		11	2	14	2	1	6	1	149
215	MSHR0130	MSHR130	Australia			1992	Burkholderia pseudomallei	human		1	16	14	4	1	19	1	134
217	MSHR0239	MSHR239	Australia			1993	Burkholderia pseudomallei	human		4	7	3	4	1	19	1	140
220	MSHR0282	MSHR282	Australia			1994	Burkholderia pseudomallei	human		1	2	3	2	1	22	1	105
221	MSHR0286	MSHR286	Australia			1994	Burkholderia pseudomallei	human		1	14	20	1	15	9	1	125
222	MSHR0287	MSHR287	Australia			1994	Burkholderia pseudomallei	human		1	14	20	1	15	9	1	125
225	MSHR0343	MSHR343	Australia			1994	Burkholderia pseudomallei	human		1	14	20	1	15	9	1	125
229	MSHR0449	MSHR449	Australia			1996	Burkholderia pseudomallei	human		1	14	20	1	15	9	15	126
232	MSHR0559	MSHR559	Australia			1998	Burkholderia pseudomallei	human		1	2	13	4	1	19	1	109

Analysis tools

Breakdown:

Analysis:

Export:

Third party:

linked to any publication
not linked to any publication
Abbink et al. 2001 N Engl J Med 344:1171-2
Borgherini et al. 2006 J Travel Med 13:318-20
BRINDLE et al. 1951 J Pathol Bacteriol 63:571-5
Bugrysheva et al. 2017 Antimicrob Agents Chemother 61:
Chen et al. 2015 Genome Announc 3:
Cheng et al. 2015 Emerg Infect Dis 21:1884-5
Chewapreecha et al. 2017 Nat Microbiol 2:16263
Daligault et al. 2014 Genome Announc 2:
Daligault et al. 2016 Genome Announc 4:
DeShazer 2004 J Bacteriol 186:3938-50
Doker et al. 2014 Am J Trop Med Hyg 91:743-6
Doker et al. 2015 Clin Infect Dis 60:243-50
Elschner et al. 2014 BMC Vet Res 10:283
Engelthaler et al. 2011 PLoS Negl Trop Dis 5:e1347
Finkelstein et al. 2000 Am J Trop Med Hyg 62:232-9
Garin et al. 2014 Emerg Infect Dis 20:1739-41
Gee et al. 2008 BMC Microbiol 8:54
Gee et al. 2014 Emerg Infect Dis 20:682-4
Gee et al. 2017 Emerg Infect Dis 23:1133-1138
Gee et al. 2018 Emerg Infect Dis 24:2091-2094
Gee et al. 2022 N Engl J Med 386:861-868
Glass et al. 2006 Int J Syst Evol Microbiol 56:2171-6
Glass et al. 2006 J Clin Microbiol 44:4601-4
Godoy et al. 2003 J Clin Microbiol 41:2068-79
Gétaz et al. 2011 Euro Surveill 16:
Hayden et al. 2012 PLoS One 7:e36507
Holden et al. 2004 Proc Natl Acad Sci U S A 101:14240-5
Hsueh et al. 2015 Genome Announc 3:
Inglis et al. 2011 Am J Trop Med Hyg 84:851-7
Issack et al. 2005 Emerg Infect Dis 11:139-40
Johnson et al. 2015 Genome Announc 3:
Johnson et al. 2015 Genome Announc 3:
Levy et al. 2008 Am J Trop Med Hyg 78:599-604
Liechti et al. 2021 Microbiol Resour Announc 10:
Liguori et al. 2011 PLoS One 6:e29323
Limmathurotsakul et al. 2014 Emerg Infect Dis 20:265-8
Marshall et al. 2010 Southeast Asian J Trop Med Public Health 41:904-12
McCombie et al. 2006 J Clin Microbiol 44:2951-62
Meza-Radilla et al. 2019 Open Forum Infect Dis 6:ofz008
Mukhopadhyay et al. 2010 J Bacteriol 192:6313-4
Mukhopadhyay et al. 2015 Genome Announc 3:
Nandi et al. 2015 Genome Res 25:129-41
Ngauy et al. 2005 J Clin Microbiol 43:970-2
O'Sullivan et al. 2011 Chest 140:239-242
Pelerito et al. 2016 IDCases 3:10-1
Podin et al. 2014 Antimicrob Agents Chemother 58:162-6
Price et al. 2010 PLoS Pathog 6:e1000725
Price et al. 2017 PLoS Negl Trop Dis 11:e0005928
Sahl et al. 2013 Genome Announc 1:
Schutzer et al. 2008 PLoS One 3:e2058
Sidjabat et al. 2015 Genome Announc 3:
Song et al. 2015 Genome Announc 3:
Spring-Pearson et al. 2015 PLoS One 10:e0140274
U'Ren et al. 2007 BMC Microbiol 7:23
Viberg et al. 2017 MBio 8:
Vlieghe et al. 2011 Emerg Infect Dis 17:1289-92
WETMORE et al. 1956 J Bacteriol 72:79-89
Wiersinga et al. 2015 Emerg Infect Dis 21:40-7
Winstanley et al. 2000 J Clin Microbiol 38:883-5
Zehnder et al. 2014 Emerg Infect Dis 20:304-6
Zimmermann et al. 2018 Sci Rep 8:8674