Download allele sequences

Select loci by scheme | Alphabetical list | All loci by scheme

C. concisus/curvus MLST

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Curator(s) Last updated
CcoaspA DNA110Fixed: 477 bp 477477W. Miller2015-10-15
CcoatpA DNA99Fixed: 489 bp 489489W. Miller2015-10-15
CcoglnA DNA109Fixed: 477 bp 477477W. Miller2015-10-15
CcogltA DNA104Fixed: 402 bp 402402W. Miller2015-10-15
CcoglyA DNA110Fixed: 507 bp 507507W. Miller2015-10-15
CcoilvD DNA113Fixed: 492 bp 492492W. Miller2015-10-15
Ccopgm DNA113Fixed: 501 bp 501501W. Miller2015-10-15

C. fetus MLST

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Full name/product Curator(s) Last updated
CfeaspA DNA17Fixed: 477 bp 477477W. Miller2017-02-17
CfeglnA DNA18Fixed: 477 bp 477477W. Miller2017-02-17
CfegltA DNA13Fixed: 402 bp 402402W. Miller2022-02-14
CfeglyA DNA14Fixed: 507 bp 507507W. Miller2017-02-17
Cfepgm DNA12Fixed: 501 bp 501501W. Miller2016-01-07
Cfetkt DNA14Fixed: 459 bp 459459W. Miller2020-10-23
CfeuncA DNA15Fixed: 489 bp 489489W. Miller2020-07-16

C. helveticus MLST

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Curator(s) Last updated
CheaspA DNA7Fixed: 477 bp 477477W. Miller2011-11-10
CheatpA DNA6Fixed: 489 bp 489489W. Miller2015-01-12
CheglnA DNA6Fixed: 477 bp 477477W. Miller2015-01-12
ChegltA DNA4Fixed: 402 bp 402402W. Miller2011-11-10
CheglyA DNA9Fixed: 507 bp 507507W. Miller2015-01-12
Chepgm DNA6Fixed: 498 bp 498498W. Miller2015-01-12
Chetkt DNA2Fixed: 459 bp 459459W. Miller2011-11-10

C. hyointestinalis MLST

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Curator(s) Last updated
ChyaspA DNA22Fixed: 477 bp 477477W. Miller2015-03-23
ChyatpA DNA22Fixed: 489 bp 489489W. Miller2021-02-10
ChyglnA DNA25Fixed: 477 bp 477477W. Miller2015-05-08
ChygltA DNA27Fixed: 402 bp 402402W. Miller2018-01-31
ChyglyA DNA28Fixed: 507 bp 507507W. Miller2015-05-08
Chypgm DNA29Fixed: 501 bp 501501W. Miller2021-02-10
Chytkt DNA34Fixed: 459 bp 459459W. Miller2016-08-11

C. insulaenigrae MLST

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Curator(s) Last updated
CinaspA DNA10Fixed: 477 bp 477477W. Miller2011-11-10
CinatpA DNA17Fixed: 489 bp 489489W. Miller2011-11-10
CinglnA DNA12Fixed: 477 bp 477477W. Miller2011-11-10
CinglyA DNA13Fixed: 507 bp 507507W. Miller2011-11-10
Cinpgi DNA15Fixed: 456 bp 456456W. Miller2011-11-10
Cinpgm DNA15Fixed: 498 bp 498498W. Miller2011-11-10
Cintkt DNA13Fixed: 459 bp 459459W. Miller2011-11-10

C. lanienae MLST

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Curator(s) Last updated
ClnaspA DNA82Fixed: 477 bp 477477W. Miller2016-07-28
ClnatpA DNA64Fixed: 489 bp 489489W. Miller2016-08-11
ClnglnA DNA80Fixed: 477 bp 477477W. Miller2016-08-11
ClngltA DNA69Fixed: 402 bp 401402W. Miller2017-08-29
ClnglyA DNA84Fixed: 507 bp 507507W. Miller2015-09-15
Clnpgm DNA81Fixed: 501 bp 501501W. Miller2016-08-11
Clntkt DNA97Fixed: 459 bp 459459W. Miller2016-08-11

C. lari MLST

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Curator(s) Last updated
Claadk DNA147Fixed: 378 bp 378378W. Miller2021-11-02
ClaatpA DNA154Fixed: 489 bp 489489W. Miller2022-02-03
ClaglnA DNA122Fixed: 477 bp 477477W. Miller2021-11-02
ClaglyA DNA114Fixed: 507 bp 507507W. Miller2021-01-14
Clapgi DNA189Fixed: 456 bp 456456W. Miller2021-12-02
Clapgm DNA174Fixed: 498 bp 498498W. Miller2022-05-23
Clatkt DNA164Fixed: 459 bp 459459W. Miller2021-11-12

C. sputorum MLST

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Curator(s) Last updated
CspaspA DNA6Fixed: 477 bp 477477W. Miller2011-11-18
CspatpA DNA6Fixed: 489 bp 489489W. Miller2011-11-18
CspglnA DNA3Fixed: 477 bp 477477W. Miller2011-11-18
CspgltA DNA6Fixed: 402 bp 402402W. Miller2011-11-18
CspglyA DNA9Fixed: 507 bp 507507W. Miller2011-11-18
Csppgm DNA6Fixed: 501 bp 501501W. Miller2011-11-18
Csptkt DNA7Fixed: 468 bp 468468W. Miller2011-11-18

C. upsaliensis MLST

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Curator(s) Last updated
Cupadk DNA45Fixed: 378 bp 378378W. Miller2020-10-15
CupaspA DNA84Fixed: 477 bp 477477W. Miller2015-10-15
CupatpA DNA40Fixed: 489 bp 489489W. Miller2015-01-28
CupglnA DNA54Fixed: 477 bp 477477W. Miller2020-10-15
CupglyA DNA56Fixed: 507 bp 507507W. Miller2015-10-15
Cuppgi DNA55Fixed: 456 bp 456456W. Miller2020-10-15
Cuptkt DNA66Fixed: 459 bp 459459W. Miller2020-10-15

Other loci

LocusDownloadTypeAllelesLength (setting)Min lengthMax length Full name/product Curator(s) Last updated
atpA_species DNA113Variable: No limits set 489489W. Miller2018-03-07

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