Sequence bin for M6328

Contig summary statistics

Contigs
4
Total length
584,087
Minimum length
500
Maximum length
579,941
Mean length
146,022
N50
579,941
L50
1
N90
579,941
L90
1
N95
579,941
L95
1

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
34contig00001579941len=579941 cov=56.8 corr=0 origname=NODE_1_length_579941_cov_56.815549_pilon sw=shovill-spades/1.1.0 date=20220315MGEN287 12691787 EMBL GBK
MGEN151 12691787
MGEN074 12981787
MGEN211 19012302
MGEN149 23404049
MGEN148 (lepA) 41335929
MGEN147 (glf) 59297098
MGEN146 (lysS) 70858557
MGEN145 86069448
MGEN144 94209722
MGEN143 974210536
MGEN142 1051410939
MGEN141 1091611197
MGEN140 1127311498
MGEN139 1150112955
MGEN138 1294513298
MGEN137 (ppnK) 1329814077
MGEN136 1408514522
MGEN135 (trpS) 1455815601
MGEN134 1558216439
MGEN133 (trxA) 1644516753
MGEN132 1680018215
MGEN131 (topA) 1819320322
MGEN130 2036221282
MGEN129 2128522556
MGEN128 (mglA) 2285424548
MGEN127 (galE) 2456325584
MGEN126 2556526209
MGEN125 2620226957
MGEN124 2696627439
MGEN123 (pgsA) 2746428129
MGEN122 (asnC) 2811029480
MGEN121 2949430123
MGEN120 (pgi) 3011331408
MGEN119 3142932265
MGEN118 3225233415
MGEN117 3340034182
MGEN116 (gmk) 3418234751
MLST_gmk 3432034712
MGEN115 (def) 3479235373
MGEN114 3534835950
MGEN113 (vacB) 3595838135
MGEN112 (secG) 3813838371
MGEN111 3839339235
MGEN110 (trxB) 3922540172
MGEN109 4016540833
MGEN108 (gatB) 4080842241
MGEN107 (gatA) 4223443667
MGEN106 4367045103
MGEN105 (ung) 4520345934
MGEN104 4599747957
MGEN103 4814149334
MGEN102 (dnaB) 4933850744
BACT000038 (rplI) 5072851180
MGEN101 (rplI) 5072851168
BACT000018 (rpsR) 5118351497
MGEN100 (rpsR) 5118351497
MGEN099 (ssb) 5149051972
MGEN098 (rpsF) 5197352599
BACT000006 (rpsF) 5197352599
MGEN097 (fus) 5265154717
BACT000007 (rpsG) 5472755194
MGEN096 (rpS7) 5472755194
BACT000012 (rpsL) 5521155630
MGEN095 (rpsL) 5521155630
MGEN094 (lgt) 5565956807
MGEN093 (ser) 5680057735
MGEN092 5773658608
MGEN091 (pth) 5860159170
BACT000030 (rplA) 5917059850
MGEN090 (rplA) 5917059850
MGEN089 (rplK) 5985060263
BACT000040 (rplK) 5985060263
MGEN088 (oppF) 6031962865
MGEN087 (oppD) 6286564073
MGEN086 (oppC) 6407565205
MGEN085 (oppB) 6519866364
MGEN084 6665567071
MGEN083 6706870142
MGEN082 7020670580
MGEN081 (uvrB) 7062272592
MGEN080 (secA) 7257074990
MGEN079 7497777601
BACT000002 (rpsB) 7760678460
MGEN078 (rpsB) 7760678460
MGEN077 (ptsG) 7857181297
MGEN076 8140381702
MGEN075 8188082695
MGEN213 8188082629
MGEN202 8192582629
MGEN286 8351083911
MGEN072 8394584232
MGEN071 8448084968
MGEN070 8509285418
MGEN069 8545686880
MGEN068 8690488415
MGEN067 (tktA) 8846590411
MGEN066 9041591815
MGEN065 9181595810
MGEN064 9585296055
MGEN063 (fruK) 9606696968
MGEN062 (fruA) 9692898970
MGEN061 99353100978
MGEN060 100957101850
MGEN059 (smpB) 101857102294
MGEN058 (prs) 102275103273
MGEN057 103252103788
MGEN056 103770104603
MGEN055 104590104973
MGEN054 (secE) 105140105511
MGEN053 105515106465
MGEN052 (manB) 106442108094
MGEN051 (cdd) 108094108486
MGEN050 (deoA) 108495109760
MGEN049 109747110418
MGEN048 (deoD) 110422111087
MGEN047 (ffh) 111191112531
MGEN046 112528112785
MGEN045 (metX) 112761113912
MGEN044 113896114843
MGEN043 114845116296
MGEN042 (potC) 116281117135
MGEN041 (potB) 117119117904
MGEN040 (potA) 117981119660
MGEN039 (ptsH) 119858120124
MGEN038 120145121860
MGEN037 122079123233
MGEN036 (glpK) 123224124750
MGEN035 124747126096
MGEN034 (aspS) 126072127742
MGEN033 (hisS) 127714128958
MGEN032 (tdk) 128987129628
MGEN031 (glpF) 129597130373
MGEN030 130523132523
MGEN029 (polC) 132784137139
MGEN028 (upp) 137173137793
MGEN027 137795138355
MGEN026 138345138950
MGEN025 138950139405
MGEN024 (efp) 139374139937
MGEN023 139950140846
MGEN022 141049142152
MGEN021 (fba) 142153142998
MGEN020 (rpoE) 143025143462
MGEN019 (metS) 143492145030
MGEN018 (pip) 145030145956
MGEN017 (dnaJ) 145940147109
MGEN016 147151150246
MGEN015 150256152025
MGEN014 152072153943
MGEN013 (folD) 154282155103
MGEN012 155066155929
MGEN011 155934156797
MGEN010 156774157430
MGEN009 157459158247
MGEN008 (trmE) 158247159575
MGEN007 159578160342
MGEN006 (tmk) 160315160947
MGEN005 (serS) 160951162204
MGEN004 (gyrA) 162176164686
MGEN003 (gyrB) 164701166653
MLST_gyrB 165702166130
MGEN002 166738167670
MGEN001 (dnaN) 167670168812
MGEN514 (soj) 169541170350
MGEN513 170340170993
MGEN512 (dnaA) 170993172306
MGEN511 172369173223
MGEN510 173229178580
MGEN509 178584179519
BACT000063 (rpmH) 179545179691
MGEN508 (rpmH) 179545179691
MGEN507 (rnpA) 179681180046
MGEN506 180018181175
MGEN505 (ksgA) 181168181947
MGEN504 (gltX) 181934183388
MGEN503 183369184646
MGEN502 (ldh) 184643185581
MGEN501 185754186263
MGEN500 (hpt) 186265186792
MGEN499 (ftsH) 186970189078
MGEN498 189062189643
MGEN497 189631190635
MGEN496 (tyrS) 190625191815
MGEN495 191847192269
MGEN494 (gtaB) 192259193137
MGEN493 193122193907
MGEN492 (tuf) 193960195144
MGEN491 195144196016
MGEN490 196278196712
MGEN489 196676197128
MGEN488 197129198772
BACT000016 (rpsP) 199383199670
MGEN487 (rpsP) 199401199670
MGEN486 (trmD) 199733200365
BACT000048 (rplS) 200349200708
MGEN485 (rplS) 200349200708
MGEN484 200814201911
MGEN483 (rbgA) 201928202695
MGEN482 202866203276
MGEN481 203418204194
MGEN480 204194205012
MGEN479 205417206568
MGEN478 206588207781
MGEN477 (frr) 207782208333
MGEN476 (pyrH) 208333209064
MGEN475 (tsf) 209045209941
MGEN474 210027211223
MGEN473 (tpiA) 211283212017
MGEN472 (pgm) 212010213533
MLST_pgm 212465213533
MGEN471 (ptsI) 213537215255
MGEN470 215252215767
MGEN469 215878216303
BACT000057 (rpmB) 216339216533
MGEN468 (rpmB) 216339216533
MGEN467 (deaD) 216556217905
BACT000015 (rpsO) 218094218354
MGEN466 (rpsO) 218094218354
MGEN465 218357220042
MGEN464 220140222587
MGEN463 (uvrA) 222565225423
MGEN462 225429227222
MGEN461 (rplM) 227260227700
BACT000042 (rplM) 227260227700
BACT000009 (rpsI) 227706228104
MGEN460 (rpsI) 227706228104
MGEN459 228160230153
MGEN458 230218233328
MGEN457 233476234582
MGEN456 (pstA) 234582236546
MGEN455 (pstB) 236531237520
MGEN454 237523238200
MGEN453 (pmsR) 238197238670
MGEN452 (eno) 238737240113
MGEN451 240103240375
MGEN450 (atpB) 240561241439
MGEN449 (atpE) 241442241750
MGEN448 (atpF) 241945242379
MGEN447 (atpH) 242372242902
MGEN446 (atpA) 242918244474
MLST_atpA 243017243818
MGEN445 (atpG) 244474245313
MGEN444 (atpD) 245315246745
MGEN443 (atpC) 246750247151
MGEN442 247153248853
MGEN441 248854249312
MGEN440 249683251257
MGEN439 (glyA) 251267252487
MGEN438 (groES) 252655252945
MGEN437 (groEL) 252958254589
MGEN436 254606255949
MGEN435 256111258039
MGEN434 258043258426
MGEN433 258569258874
MGEN432 (era) 258961259734
MGEN431 260021264871
MGEN430 264874265584
MGEN429 265680266204
MGEN428 (obgE) 266204267505
MGEN427 267498268244
MGEN426 (udk) 268241268882
MGEN425 269347270003
MGEN424 (gidB) 269996270574
MGEN423 (gidA) 270567272405
MGEN422 (argS) 272434274047
MGEN421 274094274675
MGEN420 274699274995
MGEN419 (thrS) 274995276689
MGEN418 276682277506
MGEN417 277507278352
MGEN416 (guaA) 278339279496
MGEN415 279489280463
MGEN414 280450281421
MGEN413 281523283163
MGEN412 (plsX) 283163284149
MGEN411 (rnc) 284139284927
MGEN410 284951286954
MGEN409 (fmt) 286956287891
MGEN408 287884288558
BACT000020 (rpsT) 288622288888
MGEN407 (rpsT) 288622288888
BACT000061 (rpmF) 288903289076
MGEN406 (rpmF) 288903289076
MGEN405 (rplL) 289079289447
BACT000036 (rplL) 289079289447
BACT000039 (rplJ) 289470289958
MGEN404 (rplJ) 289470289958
MGEN403 290078291313
MGEN402 (ruvB) 291303292226
MGEN401 (ruvA) 292201292818
MGEN400 293309293518
MGEN399 (ackA) 293626294807
MGEN398 294820295662
MGEN397 (clpB) 295816297960
MGEN396 297963298376
MGEN395 298525298854
MGEN394 298851299330
MGEN393 (ppa) 299354299908
MLST_ppa 299469299723
MGEN392 299956300630
MGEN391 300847301782
MGEN390 301782302954
MGEN389 303407304375
MGEN388 304527305159
MGEN387 305150305650
MGEN386 (ileS) 305718308381
MGEN385 308392309213
MGEN384 309217310257
MGEN383 310365310841
MGEN382 (rpoB) 310931315103
MGEN381 (rpoC) 315113318991
MGEN380 318988319470
MGEN379 319846321162
MGEN152 319879321180
MGEN378 (recA) 321375322397
MGEN377 322575326390
MGEN376 326377326793
MGEN375 (nifS) 326797328023
MGEN374 328132329157
MGEN373 329216329437
MGEN372 (engB) 329445330020
MGEN371 (valS) 330010332523
MGEN370 332560333153
MGEN369 333160333879
MGEN368 333867334505
MGEN367 (cmk) 334514335167
MGEN366 (engA) 335171336517
MGEN365 336556338826
MGEN364 338813339619
MGEN363 339632340519
MGEN362 (rpmG) 340536340697
BACT000062 (rpmG) 340536340697
MGEN361 (pepP) 340697341761
MGEN360 341751342515
MGEN359 343351344034
MGEN358 344070345767
MGEN357 346723349371
MGEN356 349692350552
MGEN355 350704351192
MGEN354 351209352051
MGEN353 (hmw3) 352066353865
MGEN352 353906355015
MGEN351 355116355832
MGEN350 355856357187
MGEN349 357250358095
MGEN348 (hmw1) 358155361574
MGEN347 (rpsD) 361597362214
BACT000004 (rpsD) 361597362214
MGEN346 362221363027
MGEN345 363141366767
MG309 364992365054
MGEN344 366774368006
MGEN343 368042371521
MGEN342 371521372702
MGEN341 (dnaK) 372789374576
MGEN340 374702375514
MGEN339 375496376569
MGEN338 376548377501
MGEN337 (gap) 377532378545
MGEN336 (pgk) 378547379782
MGEN335 (eutD) 379800380762
MGEN334 380965383913
MGEN333 (ftsY) 383920384960
MGEN332 385080385469
MGEN331 385472386575
MGEN330 386693388117
MGEN329 388110388844
MGEN328 (alaS) 388902391604
MGEN327 391604392020
MGEN326 392017393648
MGEN325 393638394375
MGEN324 394365395435
MGEN323 395813396196
MGEN322 396248396520
MGEN321 396460397704
MGEN320 397670398830
MGEN319 399144399662
MGEN317 400271400525
MGEN316 400557401147
MGEN315 401150402193
MGEN314 402156402554
MGEN313 (proS) 402775404226
MGEN312 (greA) 404558405043
MGEN311 405705407375
MGEN310 407487408233
MGEN309 408226408882
MGEN308 (relA) 408879411041
MGEN307 411159413996
MGEN306 414010414552
MGEN305 (nox) 414635416071
MGEN304 (pdhA) 416099417175
MGEN303 (pdhB) 417194418174
MGEN302 (pdhC) 418424419578
MGEN301 (pdhD) 419582420955
MGEN300 (lplA) 420966421976
MGEN299 421978422364
MGEN298 422357423379
MGEN297 423530424216
MGEN296 424250424597
MGEN295 (leuS) 424598426976
MGEN294 426995427831
MGEN293 428357429232
MGEN292 (mutM) 429348430202
MGEN291 430202431077
MGEN290 (polC-2) 431084433708
MGEN289 433712433942
MGEN288 434177434938
MGEN073 436114436521
MGEN150 436114436521
MGEN285 436559438856
MGEN284 438987440357
MGEN283 (prfA) 440358441437
BACT000060 (rpmE) 441437441730
MGEN282 (rpmE) 441437441730
MGEN281 441776442546
MGEN280 443268444365
MGEN279 444544446520
MGEN278 (cysS) 446525447811
MGEN277 447814448542
MGEN276 448562449902
MGEN275 (dnaE) 449892451715
MGEN274 (rpoD) 451760453253
MGEN273 453237453893
MGEN272 453880454599
MGEN271 454583455428
MGEN270 455421455918
MGEN269 455921458032
MGEN268 458038458718
MGEN267 458721460613
MGEN266 460619462481
MGEN265 (nadD) 462534463586
MGEN264 (lon) 463583465970
MGEN263 (tig) 466039467373
MGEN262 467403468287
MGEN261 468280468702
MGEN260 468692469567
MGEN259 (rpmA) 469560469874
BACT000056 (rpmA) 469560469874
MGEN258 469867470166
MGEN257 (rplU) 470159470461
BACT000050 (rplU) 470159470461
MGEN256 (nrdE) 470565472730
MGEN255 (nrdI) 472749473210
MGEN254 (nrdF) 473214474236
MGEN253 (dhfR) 474242474724
MGEN252 (thyA) 474724475587
MGEN251 475726476071
MGEN250 476051477529
MGEN249 477495478964
MGEN248 (ftsZ) 479010480119
MGEN247 480122481357
MGEN246 481359482288
MGEN245 482278482703
MGEN244 483013483294
MGEN243 483326483739
MGEN242 483732484772
MGEN241 (hmw2) 484775490192
MGEN240 490210491331
MGEN239 (pyk) 492251493777
MGEN238 (pfkA) 493780494751
MGEN237 (scpB) 494770495393
MGEN236 (scpA) 495377496792
MGEN235 (plsC) 496785497591
MGEN234 (acpS) 497584497928
MGEN233 497931498374
MGEN232 (rpsU) 498376498564
BACT000021 (rpsU) 498376498564
MGEN231 498564499223
MGEN230 (lspA) 499424499969
MGEN229 499969500895
MGEN228 500879501469
MGEN227 501462501941
MGEN226 (uvrC) 501946503739
MGEN225 (hrcA) 503775504806
MGEN224 (parC) 504803507148
MGEN223 (parE) 507148509049
MGEN222 509177509545
MGEN221 (grpE) 509555510208
MGEN220 510220512025
MGEN219 512072512779
MGEN218 (rplT) 512751513125
BACT000049 (rplT) 512751513125
BACT000064 (rpmI) 513128513307
MGEN217 (rpmI) 513128513307
MGEN216 (infC) 513310513855
MGEN215 (pheT) 513914516334
MGEN214 (pheS) 516338517363
MGEN212 518899519387
MGEN318 519504519911
MGEN210 (mgpC) 520305523451
MGEN209 (mgpB) 523453527778
MGEN286 526762527172
MGEN150 526762527172
mgpB (mgpB) 527353527574
MGEN208 (mgpA) 527785528741
MGEN207 528910529866
MGEN206 529838530704
MGEN205 530830532587
MGEN204 532580533332
MGEN203 533467533748
MGEN151 534739535268
MGEN201 534768535763
MGEN200 535799537904
MGEN199 538004538957
MGEN198 (pepF) 538958540781
MGEN197 (truA) 540771541505
MGEN196 541498542760
MGEN195 (cbiO) 542753543667
MGEN194 (cbiO) 543652544476
BACT000046 (rplQ) 544463544834
MGEN193 (rplQ) 544463544834
MGEN192 (rpoA) 544847545833
BACT000011 (rpsK) 545849546214
MGEN191 (rpS11) 545849546214
MGEN190 (rpsM) 546214546588
BACT000013 (rpsM) 546214546588
BACT000065 (rpmJ) 546588546701
MGEN189 (rpmJ) 546588546701
MGEN188 (infA) 546712546924
MGEN187 (map) 546924547670
MGEN186 (adk) 547673548317
MLST_adk 547779548240
MGEN185 (secY) 548311549738
MGEN184 (rplO) 549738550190
BACT000044 (rplO) 549738550190
MGEN183 (rpsE) 550196550831
BACT000005 (rpsE) 550196550831
BACT000047 (rplR) 550836551183
MGEN182 (rplR) 550836551183
BACT000035 (rplF) 551185551739
MGEN181 (rplF) 551185551739
MGEN180 (rpsH) 551746552171
BACT000008 (rpsH) 551746552171
BACT000014 (rpsN) 552165552350
MGEN179 (rpsN) 552165552350
BACT000034 (rplE) 552353552895
MGEN178 (rplE) 552353552895
BACT000053 (rplX) 552901553227
MGEN177 (rplX) 552901553227
BACT000043 (rplN) 553227553595
MGEN176 (rplN) 553227553583
MGEN175 (rpsQ) 553599553856
BACT000017 (rpsQ) 553599553856
MGEN174 (rpmC) 553856554458
BACT000058 (rpmC) 553856554458
BACT000045 (rplP) 554458554874
MGEN173 (rplP) 554458554874
BACT000003 (rpsC) 554880555686
MGEN172 (rpsC) 554880555686
BACT000051 (rplV) 555689556123
MGEN171 (rplV) 555689556123
MGEN170 (rpsS) 556126556389
BACT000019 (rpsS) 556126556389
BACT000031 (rplB) 556389557246
MGEN169 (rplB) 556389557246
BACT000052 (rplW) 557246557566
MGEN168 (rplW) 557246557566
MGEN167 (rplD) 557570558205
BACT000033 (rplD) 557570558205
MGEN166 (rplC) 558205558978
BACT000032 (rplC) 558205558978
MGEN165 (rpsJ) 558982559302
BACT000010 (rpsJ) 558982559302
MGEN164 559392559856
MGEN163 559896560741
MGEN162 560817562046
MGEN161 562085563182
MGEN160 563199564473
MGEN159 564486565295
MGEN158 565295566134
MGEN157 566159566497
MGEN156 (infB) 566484568343
MGEN155 568330568602
MGEN154 (nusA) 568602570197
MGEN153 570202573543
37 contig00002 2595 len=2595 cov=2.3 corr=0 origname=NODE_2_length_2595_cov_2.304348_pilon sw=shovill-spades/1.1.0 date=20220315
35 contig00003 1051 len=1051 cov=8.8 corr=0 origname=NODE_3_length_1051_cov_8.772340_pilon sw=shovill-spades/1.1.0 date=20220315
36 contig00004 500 len=500 cov=29.2 corr=0 origname=NODE_4_length_500_cov_29.185090_pilon sw=shovill-spades/1.1.0 date=20220315