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Full information on isolate WC-141 (id:1978)

Provenance/primary metadata

id
1978
isolate
WC-141
country
Iraq
continent
Asia
year
2008
species
Acinetobacter oleivorans
species id method
unknown
source
environment (medical)
detailed source
health care equipment surface
Genbank accession
AMSS00000000.1 www.ncbi.nlm.nih.gov
comments
Acinetobacter oleivorans species identification was based on complete rpoB gene sequences(98% identical to A. oleivorans)

Tracking

sender
NCBI NCBI, National Center for Biotechnology Information
curator
Auto Tagger
update history
13 updates show details
date entered
2013-12-15
datestamp
2023-09-21

Sequence bin

contigs
91
total length
3,932,253 bp
max length
263,389 bp
mean length
43,212 bp
N50
124,158
L50
12
N90
26,054
L90
37
N95
12,795
L95
47
%GC
38.85
Ns
0
gaps
0
loci tagged
264

Show sequence bin

Annotation quality metrics

Scheme completion

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST (Oxford)7114
MLST (Pasteur)77100
Ribosomal MLST5353100

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Acinetobacter calcoaceticus Pseudomonadota > Gammaproteobacteria > Moraxellales > Moraxellaceae > Acinetobacter > Acinetobacter calcoaceticus 72%
SPECIES Acinetobacter oleivorans Pseudomonadota > Gammaproteobacteria > Moraxellales > Moraxellaceae > Acinetobacter > Acinetobacter oleivorans 27%

Analysis performed: 2023-02-15

Schemes and loci

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