Full information on isolate T167 (id:733)
Provenance/primary metadata
- id
- 733
- isolate
- T167
- country
- Thailand
- continent
- Asia
- town or city
- Bangkok
- origin
- Siriraj Hospital
- year
- 2010
- species
- Acinetobacter pittii
- species id method
- unknown
- detailed source
- Urine
- Genbank accession
- JRQZ00000000 www.ncbi.nlm.nih.gov
Antimicrobial resistance
- OXA class
- Oxacillinases (Class D)
- OXA betalactamase
- blaOXA-23-like [OXA-23]
Tracking
- sender
- Witchuda Kamolvit, University of Queensland
- curator
- Auto Tagger
- update history
- 23 updates show details
- date entered
- 2015-03-26
- datestamp
- 2023-09-21
Sequence bin
- contigs
- 134
- total length
- 4,357,452 bp
- max length
- 234,592 bp
- mean length
- 32,519 bp
- N50
- 76,447
- L50
- 19
- N90
- 17,545
- L90
- 59
- N95
- 9,452
- L95
- 76
- %GC
- 38.66
- Ns
- 0
- gaps
- 0
- loci tagged
- 2,183
Annotation quality metrics
Scheme completion
| Scheme | Scheme loci | Designated loci | Annotation | |
|---|---|---|---|---|
| Score | Status | |||
| MLST (Oxford) | 7 | 6 | 85 | |
| MLST (Pasteur) | 7 | 7 | 100 | |
| Ribosomal MLST | 53 | 53 | 100 | |
Schemes and loci
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