Full information on isolate X16/0126 (id:729)

Provenance/primary metadata

id
729
isolate
X16/0126
country
Poland
continent
Europe
region
Pulawy
year
2016
month
6
other animal strains
Trachemys scripta troostii
species
Aeromonas veronii

Tracking

sender
Olga Golawska, National Veterinary Research Institute, Pulawy, Poland
curator
Keith Jolley, University of Oxford, UK (E-mail: keith.jolley@biology.ox.ac.uk)
update history
3 updates show details
date entered
2019-07-26
datestamp
2020-04-06

Sequence bin

contigs
148
total length
4,807,571 bp
max length
661,738 bp
mean length
32,484 bp
N50
222,869
L50
7
N90
64,149
L90
22
N95
32,726
L95
28
%GC
58.35
Ns
0
gaps
0
loci tagged
6

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Aeromonas veronii Pseudomonadota > Gammaproteobacteria > Aeromonadales > Aeromonadaceae > Aeromonas > Aeromonas veronii 92%
SPECIES Aeromonas fluvialis Pseudomonadota > Gammaproteobacteria > Aeromonadales > Aeromonadaceae > Aeromonas > Aeromonas fluvialis 3%
GENUS Pseudomonas Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas 3%

Analysis performed: 2023-03-08

Schemes and loci

Tools

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