Full information on isolate PBi (id:155)
Provenance/primary metadata
- id
- 155
- isolate
- PBi
- alias
- ospA serotype 4
- country
- Germany
- continent
- Europe
- region
- Ingolstadt
- species
- Borrelia bavariensis
- source
- human
- detailed source
- CSF, NB
- collector
- B. Wilske
- comments
- NB
- sender
- Volker Fingerle, Bavarian Health and Food Safety Authority, Germany
- curator
- Auto Tagger
- update history
- 15 updates show details
- date entered
- 2015-01-29
- datestamp
- 2023-01-27
Sequence bin
- contigs
- 15
- total length
- 2,266,773 bp
- max length
- 905,817 bp
- mean length
- 151,119 bp
- N50
- 904,246
- L50
- 2
- N90
- 31,009
- L90
- 7
- N95
- 27,108
- L95
- 11
- %GC
- 27.96
- Ns
- 0
- gaps
- 0
- loci tagged
- 1,002
Analysis
rMLST species identification
| Rank | Taxon | Taxonomy | Support | Matches |
|---|---|---|---|---|
| SPECIES | Borreliella garinii | Spirochaetes > Spirochaetia > Spirochaetales > Borreliaceae > Borreliella > Borreliella garinii | 100% |
Analysis performed: 2022-09-01
Schemes and loci
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