Full information on isolate Hiratsuka_wgs (id:2704)

Provenance/primary metadata

id
2704
isolate
Hiratsuka_wgs
country
Japan
continent
Asia
region
Niijata
species
Borrelia bavariensis
year
2008
source
human
detailed source
EM
sender
Volker Fingerle, Bavarian Health and Food Safety Authority, Germany
curator
Auto Tagger
update history
15 updates show details
date entered
2020-02-17
datestamp
2023-01-27

Sequence bin

contigs
43
total length
1,361,041 bp
max length
464,141 bp
mean length
31,653 bp
N50
222,845
L50
2
N90
14,489
L90
17
N95
9,786
L95
22
%GC
28.02
Ns
0
gaps
0
loci tagged
807

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Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Borreliella garinii Spirochaetes > Spirochaetia > Spirochaetales > Borreliaceae > Borreliella > Borreliella garinii 100%

Analysis performed: 2022-09-01

Schemes and loci

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