Full information on isolate konnai 17 clone1_wgs (id:2708)

Provenance/primary metadata

id
2708
isolate
konnai 17 clone1_wgs
country
Japan
continent
Asia
region
Hokkaido
species
Borrelia bavariensis
year
2011
source
tick
detailed source
Ixodes persulcatus
sender
Volker Fingerle, Bavarian Health and Food Safety Authority, Germany
curator
Auto Tagger
update history
13 updates show details
date entered
2020-02-17
datestamp
2023-01-27

Sequence bin

contigs
43
total length
1,300,543 bp
max length
405,549 bp
mean length
30,246 bp
N50
213,343
L50
3
N90
14,172
L90
13
N95
7,336
L95
20
%GC
27.90
Ns
0
gaps
0
loci tagged
804

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Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Borreliella garinii Spirochaetes > Spirochaetia > Spirochaetales > Borreliaceae > Borreliella > Borreliella garinii 100%

Analysis performed: 2022-09-01

Schemes and loci

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