Full information on isolate PNeb_wgs (id:2711)
Provenance/primary metadata
- id
- 2711
- isolate
- PNeb_wgs
- country
- Germany
- continent
- Europe
- region
- Munich
- species
- Borrelia bavariensis
- year
- 1988
- source
- human
- detailed source
- Skin, ACA
- sender
- Volker Fingerle, Bavarian Health and Food Safety Authority, Germany
- curator
- Auto Tagger
- update history
- 14 updates show details
- date entered
- 2020-02-17
- datestamp
- 2023-01-27
Sequence bin
- contigs
- 15
- total length
- 1,285,902 bp
- max length
- 404,923 bp
- mean length
- 85,727 bp
- N50
- 271,714
- L50
- 2
- N90
- 27,234
- L90
- 9
- N95
- 25,025
- L95
- 11
- %GC
- 27.72
- Ns
- 0
- gaps
- 0
- loci tagged
- 818
Analysis
rMLST species identification
| Rank | Taxon | Taxonomy | Support | Matches |
|---|---|---|---|---|
| SPECIES | Borreliella garinii | Spirochaetes > Spirochaetia > Spirochaetales > Borreliaceae > Borreliella > Borreliella garinii | 100% |
Analysis performed: 2022-09-01
Schemes and loci
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