Full information on isolate PNi_wgs (id:2712)

Provenance/primary metadata

id
2712
isolate
PNi_wgs
country
Germany
continent
Europe
region
Halle
species
Borrelia bavariensis
year
2000
source
human
detailed source
skin
sender
Volker Fingerle, Bavarian Health and Food Safety Authority, Germany
curator
Auto Tagger
update history
14 updates show details
date entered
2020-02-17
datestamp
2023-01-27

Sequence bin

contigs
21
total length
1,236,164 bp
max length
407,886 bp
mean length
58,865 bp
N50
222,881
L50
2
N90
27,007
L90
10
N95
15,477
L95
13
%GC
27.78
Ns
0
gaps
0
loci tagged
991

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Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Borreliella garinii Spirochaetes > Spirochaetia > Spirochaetales > Borreliaceae > Borreliella > Borreliella garinii 100%

Analysis performed: 2022-09-01

Schemes and loci

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