Full information on isolate Prm965-2013_wgs (id:2714)

Provenance/primary metadata

id
2714
isolate
Prm965-2013_wgs
country
Russia [Europe]
continent
Europe
region
Perm region, environs of Perm
species
Borrelia bavariensis
year
2013
source
tick
detailed source
Ixodes persulcatus
sender
Volker Fingerle, Bavarian Health and Food Safety Authority, Germany
curator
Auto Tagger
update history
15 updates show details
date entered
2020-02-17
datestamp
2023-01-27

Sequence bin

contigs
52
total length
1,307,240 bp
max length
464,409 bp
mean length
25,140 bp
N50
224,675
L50
2
N90
14,704
L90
11
N95
4,086
L95
22
%GC
27.83
Ns
0
gaps
0
loci tagged
784

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Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Borreliella garinii Spirochaetes > Spirochaetia > Spirochaetales > Borreliaceae > Borreliella > Borreliella garinii 100%

Analysis performed: 2022-09-01

Schemes and loci

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