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Full information on isolate M6489 (id:24)

Provenance/primary metadata

id: 24
isolate: M6489
country: Sweden
continent: Europe
year: 2007

AMR prediction

azithromycin mic: >16 μg/mL
moxifloxacin mic: >16 μg/mL
doxycycline mic: =16 μg/mL
ciprofloxacin mic: >16 μg/mL
erythromycin mic: >16 μg/mL

Tracking

ENA run accession: ERR486849 www.ebi.ac.uk
sender: Jolinda de Korne
curator: Jolinda de Korne, GGD Amsterdam (E-mail: jolindadekorne@gmail.com)
update history: 25 updates show details
date entered: 2022-03-31
datestamp: 2022-04-13

Publication (1)

Fookes MC, Hadfield J, Harris S, Parmar S, Unemo M, Jensen JS, Thomson NR (2017). Mycoplasma genitalium: whole genome sequence analysis, recombination and population structure. BMC Genomics 18:993

Sequence bin

contigs: 1
length: 582,045 bp
%GC: 31.71
Ns: 0
gaps: 0
loci tagged: 573

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Annotation quality metrics

Scheme completion

Scheme	Scheme loci	Designated loci	Annotation
Scheme	Scheme loci	Designated loci	Score	Status
Ribosomal MLST	53	53	100

Analysis

rMLST species identification

Rank	Taxon	Taxonomy	Support	Matches
SPECIES	Mycoplasmoides genitalium	Mycoplasmatota > [unclassified] > Mycoplasmoidales > Metamycoplasmataceae > Mycoplasmoides > Mycoplasmoides genitalium	76%

Analysis performed: 2023-04-05

Schemes and loci

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