Full information on isolate 287/91 (id:6)
Provenance/primary metadata
- id
- 6
- isolate
- 287/91
- aliases
- AM933173; NC_011274; PRJEA30689; PRJNA59249
- subspecies
- enterica
- serovar
- Gallinarum
- country
- Brazil
- continent
- South America
- source
- animal
- detailed source
- hens
Tracking
- rMLST database accession
- 75 pubmlst.org
- sender
- Maddi Pearce, University of Oxford, UK
- curator
- Auto Tagger
- update history
- 12 updates show details
- date entered
- 2014-11-11
- datestamp
- 2021-07-07
Publication (1)
- Thomson NR, Clayton DJ, Windhorst D, Vernikos G, Davidson S, Churcher C, Quail MA, Stevens M, Jones MA, Watson M, Barron A, Layton A, Pickard D, Kingsley RA, Bignell A, Clark L, Harris B, Ormond D, Abdellah Z, Brooks K, Cherevach I, Chillingworth T, Woodward J, Norberczak H, Lord A, Arrowsmith C, Jagels K, Moule S, Mungall K, Sanders M, Whitehead S, Chabalgoity JA, Maskell D, Humphrey T, Roberts M, Barrow PA, Dougan G, Parkhill J (2008). Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways. Genome Res 18:1624-37
Similar isolates (determined by classification schemes)
Some groups only contain this isolate. Show single groups
Experimental schemes are subject to change and are not a stable part of the nomenclature.
| Classification scheme | Underlying scheme | Clustering method | Mismatch threshold | Status | Group |
|---|---|---|---|---|---|
| Salm_cgc_200 | SalmcgMLST v1.0 | Single-linkage | 200 | experimental | 5 (41 isolates) |
| Salm_cgc_200 | SalmcgMLST v1.0 | Single-linkage | 200 | experimental | 5 (41 isolates) |
| Salm_cgc_100 | SalmcgMLST v1.0 | Single-linkage | 100 | experimental | 6 (1 isolate) |
| Salm_cgc_50 | SalmcgMLST v1.0 | Single-linkage | 50 | experimental | 6 (1 isolate) |
| Salm_cgc_25 | SalmcgMLST v1.0 | Single-linkage | 25 | experimental | 6 (1 isolate) |
Schemes and loci
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