Full information on isolate SL476 (id:9)

Provenance/primary metadata

id
9
isolate
SL476
aliases
CP001120; NC_011083; PRJNA20045; PRJNA58973
subspecies
enterica
serovar
Heidelberg

Tracking

rMLST database accession
78 pubmlst.org
sender
Maddi Pearce, University of Oxford, UK
curator
Auto Tagger
update history
11 updates show details
date entered
2014-11-11
datestamp
2021-07-07

Sequence bin

contigs
1
length
4,888,768 bp
%GC
52.09
Ns
0
gaps
0
loci tagged
6,599

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Salmonella enterica Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica 100%

Analysis performed: 2023-03-16

Similar isolates (determined by classification schemes)

Some groups only contain this isolate. Show single groups

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Salm_cgc_200SalmcgMLST v1.0Single-linkage200experimental8 (134 isolates)
Salm_cgc_100SalmcgMLST v1.0Single-linkage100experimental9 (130 isolates)
Salm_cgc_50SalmcgMLST v1.0Single-linkage50experimental9 (106 isolates)
Salm_cgc_200SalmcgMLST v1.0Single-linkage200experimental8 (134 isolates)
Salm_cgc_100SalmcgMLST v1.0Single-linkage100experimental9 (130 isolates)
Salm_cgc_50SalmcgMLST v1.0Single-linkage50experimental9 (106 isolates)
Salm_cgc_25SalmcgMLST v1.0Single-linkage25experimental9 (1 isolate)

Schemes and loci

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