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PubMLST
Public databases for molecular typing
and microbial genome diversity

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  3. Brachyspira spp.

Brachyspira spp.

Source of isolates submitted to the Brachyspira spp. database
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This site contains schemes that cover the entire Brachyspira genus as well as a number of species-specific schemes.

The whole genus MLST scheme is described in Råsbäck et al. (2007) Microbiology 153:4074-4087.

Database curated by trepon74atgmail.com (Tom La).

The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Allele sequences:
1,511
Last updated:
2022-12-10

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Isolates:
937
Last updated:
2022-12-11

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Get in touch with us if you have any comments or suggestions concerning the website and the databases.

Cite us

Please cite Jolley et al. 2018 Wellcome Open Res 3:124 if you use data or analysis from PubMLST in your publications.

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Wellcome Trust

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