Orientia tsutsugamushi

Source of isolates submitted to the Orientia tsutsugamushi database

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This MLST scheme was developed by Piengchan Sonthayanon and colleagues at Mahidol University, Thailand. It is described in Sonthayanon et al. 2010 PLoS Negl Trop Dis 4:e752.

Database curated by piengchantropmedres.ac (Piengchan Sonthayanon) and elizabeth.btropmedres.ac (Elizabeth Batty).

Primers

The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Orientia tsutsugamushi

Typing

Isolate collection

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Orientia tsutsugamushi

Typing

Isolate collection

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Supported by