Recent database update activity
2023-12-06:- Salmonella spp.: 7 isolates
- Acinetobacter baumannii: 1 isolate; 1 genome; 2 alleles; 1 MLST (Pasteur) profile
- Aeromonas spp.: 18 isolates; 17 genomes; 1 MLST profile
- Bacillus cereus: 9 isolates; 3 MLST profiles
- Borrelia spp.: 6 MLST profiles
- Burkholderia pseudomallei: 33 isolates; 23,070 alleles; 31 cgMLST profiles
- Campylobacter jejuni/coli: 65 isolates; 142 alleles; 72 C. jejuni / C. coli cgMLST v1 profiles; 70 C. jejuni / C. coli cgMLST v2 profiles
- Enterococcus faecium: 1 isolate
- Escherichia spp.: 10,735 alleles
- Mycoplasma genitalium: 1 allele
- Mycoplasma hyopneumoniae: 1 allele
- Neisseria spp.: 54 isolates; 49 genomes; 887 alleles; 10 MLST profiles; 2 NG MAST v2.0 profiles; 6 N. meningitidis cgMLST v2 profiles
- Ribosomal MLST: 57,760 isolates; 27 alleles
- Salmonella spp.: 56 isolates; 1 MLST profile
- Streptococcus pyogenes: 2 isolates; 10 alleles; 1 MLST profile
- Vibrio cholerae: 3 isolates; 2,179 alleles
- Anaplasma phagocytophilum: 24 isolates
- Bacillus cereus: 2 isolates; 18 B. cereus cgMLST profiles; 4 MLST profiles
- Burkholderia pseudomallei: 33 genomes
- Campylobacter jejuni/coli: 31 isolates; 94 genomes; 301 alleles
- Candida albicans: 4 MLST profiles
- Clostridium perfringens: 7 isolates
- Cronobacter spp.: 17 isolates
- Escherichia spp.: 1 isolate; 2 MLST (Achtman) profiles
- Haemophilus influenzae: 14 cgMLST v1 profiles
- Mycoplasma synoviae: 3 isolates; 3 alleles; 3 MLST profiles
- Neisseria spp.: 1 isolate; 2 alleles; 259 N. gonorrhoeae cgMLST v1.0 profiles
- Pasteurella multocida: 1 Multiple host MLST profile
- Ribosomal MLST: 45 isolates; 36 alleles; 12 rMLST profiles
- Salmonella spp.: 5 alleles; 4 MLST profiles
- Staphylococcus aureus: 23 alleles
- Streptococcus uberis: 94 cgMLST profiles
- Vibrio cholerae: 1 isolate; 3 genomes; 1 allele; 3 MLST profiles