Recent database update activity
2026-03-11:- Staphylococcus aureus: 24 isolates; 89 alleles
- Cronobacter spp.: 3 isolates; 1 allele
- Enterococcus faecium: 5 alleles; 5 MLST (Bezdíček et al.) profiles
- Escherichia spp.: 12,736 alleles; 3 MLST (Achtman) profiles
- Neisseria spp.: 4 isolates; 3 genomes; 93 alleles; 2 MLST profiles; 16 N. meningitidis cgMLST v3 profiles
- Pseudomonas aeruginosa: 6 isolates; 6 MLST profiles
- Ribosomal MLST: 6 alleles
- Salmonella spp.: 1 MLST profile
- Serratia spp.: 1 isolate
- Staphylococcus aureus: 236 isolates; 417 genomes; 50,207 alleles; 115 cgMLST profiles; 3 MLST profiles
- Staphylococcus pseudintermedius: 8 alleles
- Stenotrophomonas maltophilia: 2 isolates; 2 MLST profiles
- Streptococcus pneumoniae: 650 isolates; 124 genomes; 8,406 alleles; 478 cgMLST profiles; 27 MLST profiles
- Streptococcus pyogenes: 1 cgMLST profile
- Vibrio cholerae: 32 isolates
- Vibrio parahaemolyticus: 23 isolates; 23 genomes; 8,346 alleles; 22 cgMLST profiles; 5 MLST profiles
- Yersinia pseudotuberculosis: 2 MLST profiles
- Aeromonas spp.: 4 isolates; 2 genomes; 12 alleles; 4 MLST profiles
- Bacillus cereus: 21 B. cereus cgMLST profiles
- Campylobacter jejuni/coli: 1 isolate; 1 MLST profile
- Candida albicans: 1 allele; 3 MLST profiles
- Chlamydiales spp.: 3 C. trachomatis cgMLST v1.0 profiles
- Clostridioides difficile: 1 isolate; 1 MLST profile
- Cronobacter spp.: 1 genome
- Escherichia spp.: 1 allele; 1 MLST (Achtman) profile
- Haemophilus influenzae: 19 isolates; 17 genomes; 182 alleles; 56 cgMLST v1 profiles; 4 MLST profiles
- Klebsiella oxytoca: 2 MLST profiles
- Neisseria spp.: 43 isolates; 17 genomes; 281 alleles; 23 NG MAST v2.0 profiles
- Salmonella spp.: 4 alleles; 6 MLST profiles
- Serratia spp.: 1 genome
- Staphylococcus aureus: 6,990 isolates; 171,971 alleles; 4,925 cgMLST profiles; 139 MLST profiles
- Streptococcus agalactiae: 240 isolates; 1 allele; 1 MLST profile
- Streptococcus pneumoniae: 66 isolates
- Streptococcus uberis: 199 alleles
- Vibrio parahaemolyticus: 2 alleles