Recent database update activity
2024-11-21:- Acinetobacter baumannii: 95 isolates; 91 genomes; 6 MLST (Oxford) profiles
- Campylobacter jejuni/coli: 5 isolates; 5 genomes; 18 alleles; 5 MLST profiles
- Enterobacter cloacae: 1 isolate; 1 MLST profile
- Escherichia spp.: 259 isolates; 259 genomes
- Neisseria spp.: 1 allele; 1 MLST profile; 1 N. meningitidis cgMLST v3 profile
- Streptococcus pneumoniae: 89 cgMLST profiles
- Bacillus cereus: 1,040 alleles
- Burkholderia cepacia complex: 1 isolate; 1 MLST profile
- Clostridium septicum: 20 isolates; 16 alleles; 8 MLST profiles
- Enterobacter cloacae: 1 allele
- Escherichia spp.: 1 allele; 2 MLST (Achtman) profiles
- Haemophilus influenzae: 1 MLST profile
- Klebsiella aerogenes: 17 alleles
- Neisseria spp.: 2 isolates; 1 genome; 685 alleles; 8 N. meningitidis cgMLST v3 profiles
- Ribosomal MLST: 49 alleles; 71 rMLST profiles
- Salmonella spp.: 20 isolates
- Streptococcus pneumoniae: 1,528 alleles; 616 cgMLST profiles
- Streptococcus pyogenes: 4 isolates; 1 genome; 115 alleles; 4 MLST profiles
- Streptococcus suis: 5 isolates; 7 MLST profiles
- Acinetobacter baumannii: 2 alleles; 3 MLST (Oxford) profiles; 1 MLST (Pasteur) profile
- Bacillus cereus: 27,649 alleles
- Borrelia spp.: 38 isolates; 12 MLST profiles
- Burkholderia cepacia complex: 1 allele
- Candida krusei: 101 isolates; 69 MLST profiles
- Carnobacterium maltaromaticum: 18 isolates
- Clostridium perfringens: 2 alleles
- Enterobacter cloacae: 1 isolate
- Enterococcus faecium: 1 isolate; 1 genome; 146 alleles; 2 MLST profiles; 2 MLST (Bezdíček et al.) profiles
- Escherichia spp.: 16,780 alleles; 9 MLST (Achtman) profiles
- Klebsiella oxytoca: 3 isolates; 2 genomes; 67 alleles; 3 MLST profiles
- Lactococcus garvieae: 3 alleles
- Mycoplasma hyosynoviae: 1 isolate; 1 MLST profile
- Neisseria spp.: 12 isolates; 12 genomes; 1,997 alleles; 1 NG MAST v2.0 profile; 2 N. meningitidis cgMLST v3 profiles
- Pseudomonas aeruginosa: 2 alleles
- Ribosomal MLST: 16 isolates; 42 alleles; 60 rMLST profiles
- Staphylococcus aureus: 36 isolates; 2 genomes; 79 alleles; 27 MLST profiles
- Streptococcus pneumoniae: 4,227 alleles; 264 cgMLST profiles
- Streptococcus pyogenes: 145 alleles
- Streptococcus suis: 11 isolates; 5 alleles; 6 MLST profiles
- Vibrio parahaemolyticus: 24 cgMLST profiles