Recent database update activity
2026-03-31:- Acinetobacter baumannii: 5 isolates; 2 MLST (Pasteur) profiles
- Enterococcus faecalis: 1 allele
- Escherichia spp.: 9,996 alleles
- Haemophilus influenzae: 474 isolates; 1 genome; 1 allele; 2 MLST profiles
- Mammaliicoccus sciuri: 18 MLST profiles
- Mycoplasma hyopneumoniae: 3 alleles
- Neisseria spp.: 305 isolates; 7 alleles; 26 N. meningitidis cgMLST v3 profiles
- Orientia tsutsugamushi: 2 MLST profiles
- Streptococcus pneumoniae: 3,224 isolates; 7 genomes; 282 alleles; 139 cgMLST profiles; 10 MLST profiles
- Streptococcus pyogenes: 32 isolates
- Ureaplasma spp.: 122 isolates
- Acinetobacter baumannii: 2 isolates; 20 MLST (Oxford) profiles; 5 MLST (Pasteur) profiles
- Campylobacter jejuni/coli: 1 C. jejuni / C. coli cgMLST v1 profile; 1 C. jejuni / C. coli cgMLST v2 profile
- Candida albicans: 1 allele
- Candida tropicalis: 6 alleles; 17 MLST profiles
- Clostridioides difficile: 3 alleles
- Enterococcus faecium: 1 isolate; 1 genome; 32 alleles; 1 MLST profile
- Escherichia spp.: 2 alleles; 2 MLST (Achtman) profiles
- Haemophilus influenzae: 9 isolates; 9 genomes; 117 alleles; 9 cgMLST v1 profiles
- Mammaliicoccus sciuri: 23 isolates; 16 alleles; 17 MLST profiles
- Mycoplasma genitalium: 8 isolates; 8 genomes; 8 alleles
- Neisseria spp.: 18 isolates; 6 genomes; 216 alleles; 11 NG MAST v2.0 profiles; 1 N. gonorrhoeae cgMLST v1.0 profile; 1 N. gonorrhoeae cgMLST v2 profile
- Ribosomal MLST: 1 allele
- Salmonella spp.: 9 alleles; 7 MLST profiles
- Staphylococcus epidermidis: 3 isolates; 3 MLST profiles
- Streptococcus pneumoniae: 1 MLST profile
- Taylorella spp.: 132 isolates; 132 genomes
- Vibrio cholerae: 1 isolate; 1 MLST profile
- Yersinia pseudotuberculosis: 2 alleles; 3 MLST profiles
- Pasteurella multocida: 27 RIRDC MLST profiles
- Salmonella spp.: 8,273 alleles
- Vibrio cholerae: 3 alleles