Taxonomic coverage of the rMLST databases
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Please note that some taxa may appear more than once in the hierarchy. This is caused by a delay in propagating changes in taxonomic placement.
- Abditibacteriota (isolates:1; rSTs:1)
- Acidobacteriota (isolates:113; rSTs:96 tree)
- Blastocatellia (isolates:11; rSTs:7 tree)
- Holophagae (isolates:26; rSTs:22 tree)
- Acanthopleuribacterales (isolates:2)
- Holophagales (isolates:23; rSTs:22 tree)
- Holophagaceae (isolates:23; rSTs:22 tree)
- Geothrix (isolates:20; rSTs:19 tree)
- Candidatus Geothrix odensensis (isolates:1; rSTs:1)
- Candidatus Geothrix skivensis (isolates:1)
- Geothrix alkalitolerans (isolates:1; rSTs:1)
- Geothrix edaphica (isolates:1; rSTs:1)
- Geothrix fermentans (isolates:1; rSTs:1)
- Geothrix fuzhouensis (isolates:1; rSTs:1)
- Geothrix limicola (isolates:1; rSTs:1)
- Geothrix oryzae (isolates:1; rSTs:1)
- Geothrix oryzisoli (isolates:1; rSTs:1)
- Geothrix paludis (isolates:1; rSTs:1)
- Geothrix rubra (isolates:1; rSTs:1)
- Geothrix sp. (isolates:8; rSTs:8 tree)
- Geothrix terrae (isolates:1; rSTs:1)
- Holophaga (isolates:1; rSTs:1)
- Holophaga foetida (isolates:1; rSTs:1)
- Mesoterricola (isolates:2; rSTs:2)
- Geothrix (isolates:20; rSTs:19 tree)
- Holophagaceae (isolates:23; rSTs:22 tree)
- Thermotomaculales (isolates:1)
- Terriglobia (isolates:73; rSTs:64 tree)
- Bryobacterales (isolates:4; rSTs:3 tree)
- Candidatus Acidoferrales (isolates:1; rSTs:1)
- Terriglobales (isolates:67; rSTs:60 tree)
- Acidobacteriaceae (isolates:64; rSTs:60 tree)
- Acidicapsa (isolates:3; rSTs:3 tree)
- Acidipila (isolates:1; rSTs:1)
- Acidipila rosea (isolates:1; rSTs:1)
- Acidisarcina (isolates:1; rSTs:1)
- Acidisarcina polymorpha (isolates:1; rSTs:1)
- Acidobacterium (isolates:1; rSTs:1)
- Acidobacterium capsulatum (isolates:1; rSTs:1)
- Alloacidobacterium (isolates:1; rSTs:1)
- Alloacidobacterium dinghuense (isolates:1; rSTs:1)
- Bryocella (isolates:1; rSTs:1)
- Bryocella elongata (isolates:1; rSTs:1)
- Candidatus Sulfotelmatomonas (isolates:1)
- Candidatus Sulfotelmatomonas gaucii (isolates:1)
- Edaphobacter (isolates:19; rSTs:18 tree)
- Edaphobacter acidisoli (isolates:2; rSTs:1)
- Edaphobacter aggregans (isolates:1; rSTs:1)
- Edaphobacter bradus (isolates:1; rSTs:1)
- Edaphobacter dinghuensis (isolates:3; rSTs:2)
- Edaphobacter flagellatus (isolates:1; rSTs:1)
- Edaphobacter lichenicola (isolates:7; rSTs:7 tree)
- Edaphobacter modestus (isolates:1; rSTs:1)
- Edaphobacter sp. (isolates:3; rSTs:4 tree)
- Granulicella (isolates:17; rSTs:17 tree)
- Granulicella aggregans (isolates:2; rSTs:2)
- Granulicella arctica (isolates:2; rSTs:2)
- Granulicella cerasi (isolates:1; rSTs:1)
- Granulicella mallensis (isolates:2; rSTs:2)
- Granulicella paludicola (isolates:1; rSTs:1)
- Granulicella pectinivorans (isolates:1; rSTs:1)
- Granulicella rosea (isolates:1; rSTs:1)
- Granulicella sibirica (isolates:1; rSTs:1)
- Granulicella sp. (isolates:5; rSTs:5 tree)
- Granulicella tundricola (isolates:1; rSTs:1)
- Occallatibacter (isolates:2; rSTs:2)
- Paracidobacterium (isolates:1; rSTs:1)
- Paracidobacterium acidisoli (isolates:1; rSTs:1)
- Pseudacidobacterium (isolates:1; rSTs:1)
- Pseudacidobacterium ailaaui (isolates:1; rSTs:1)
- Silvibacterium (isolates:4; rSTs:2)
- Terracidiphilus (isolates:1; rSTs:1)
- Terracidiphilus gabretensis (isolates:1; rSTs:1)
- Terriglobus (isolates:10; rSTs:10 tree)
- Candidatus Korobacteraceae (isolates:3)
- Acidobacteriaceae (isolates:64; rSTs:60 tree)
- Thermoanaerobaculia (isolates:1; rSTs:1)
- Vicinamibacteria (isolates:2; rSTs:2)
- Actinomycetota (isolates:36018; rSTs:16547)
- Acidimicrobiia (isolates:21; rSTs:19 tree)
- Acidimicrobiales (isolates:21; rSTs:19 tree)
- Acidimicrobiaceae (isolates:8; rSTs:7 tree)
- Acidiferrimicrobium (isolates:1; rSTs:1)
- Acidiferrimicrobium sp. (isolates:1; rSTs:1)
- Acidimicrobium (isolates:2; rSTs:1)
- Acidimicrobium ferrooxidans (isolates:2; rSTs:1)
- Aciditerrimonas (isolates:1; rSTs:1)
- Aciditerrimonas ferrireducens (isolates:1; rSTs:1)
- Acidithrix (isolates:2; rSTs:2)
- Ferrimicrobium (isolates:1; rSTs:1)
- Ferrimicrobium acidiphilum (isolates:1; rSTs:1)
- Ferrithrix (isolates:1; rSTs:1)
- Ferrithrix thermotolerans (isolates:1; rSTs:1)
- Acidiferrimicrobium (isolates:1; rSTs:1)
- Iamiaceae (isolates:7; rSTs:6 tree)
- Ilumatobacteraceae (isolates:4; rSTs:4 tree)
- Microthrixaceae (isolates:2; rSTs:2)
- Acidimicrobiaceae (isolates:8; rSTs:7 tree)
- Acidimicrobiales (isolates:21; rSTs:19 tree)
- Actinomycetes (isolates:35338; rSTs:16073)
- Acidothermales (isolates:2; rSTs:1)
- Actinomycetales (isolates:495; rSTs:380 tree)
- Actinomycetaceae (isolates:495; rSTs:380 tree)
- Actinobaculum (isolates:10; rSTs:6 tree)
- Actinomyces (isolates:181; rSTs:135 tree)
- Actinomyces acetigenes (isolates:1)
- Actinomyces bouchesdurhonensis (isolates:1; rSTs:1)
- Actinomyces bowdenii (isolates:5; rSTs:4 tree)
- Actinomyces capricornis (isolates:1; rSTs:1)
- Actinomyces culturomici (isolates:1; rSTs:1)
- Actinomyces dentalis (isolates:1; rSTs:1)
- Actinomyces denticolens (isolates:4; rSTs:2)
- Actinomyces faecalis (isolates:2; rSTs:2)
- Actinomyces gaoshouyii (isolates:3; rSTs:2)
- Actinomyces gerencseriae (isolates:1; rSTs:1)
- Actinomyces glycerinitolerans (isolates:1; rSTs:1)
- Actinomyces graevenitzii (isolates:3; rSTs:3 tree)
- Actinomyces haliotis (isolates:1; rSTs:1)
- Actinomyces howellii (isolates:2; rSTs:1)
- Actinomyces ihuae (isolates:1; rSTs:1)
- Actinomyces israelii (isolates:1; rSTs:1)
- Actinomyces johnsonii (isolates:5; rSTs:2)
- Actinomyces lilanjuaniae (isolates:1; rSTs:1)
- Actinomyces marmotae (isolates:3; rSTs:1)
- Actinomyces marseillensis (isolates:1; rSTs:1)
- Actinomyces massiliensis (isolates:3; rSTs:2)
- Actinomyces mediterranea (isolates:1; rSTs:1)
- Actinomyces minihominis (isolates:1; rSTs:1)
- Actinomyces naeslundii (isolates:27; rSTs:20 tree)
- Actinomyces oricola (isolates:1; rSTs:1)
- Actinomyces oris (isolates:34; rSTs:26 tree)
- Actinomyces polynesiensis (isolates:2)
- Actinomyces procaprae (isolates:2; rSTs:2)
- Actinomyces provencensis (isolates:1; rSTs:1)
- Actinomyces qiguomingii (isolates:2; rSTs:1)
- Actinomyces radicidentis (isolates:1; rSTs:1)
- Actinomyces respiraculi (isolates:2; rSTs:2)
- Actinomyces ruminicola (isolates:2; rSTs:2)
- Actinomyces slackii (isolates:2; rSTs:1)
- Actinomyces sp. (isolates:39; rSTs:29 tree)
- Actinomyces stomatis (isolates:1)
- Actinomyces succiniciruminis (isolates:1; rSTs:1)
- Actinomyces timonensis (isolates:1; rSTs:1)
- Actinomyces trachealis (isolates:2; rSTs:2)
- Actinomyces urinae (isolates:1; rSTs:1)
- Actinomyces urogenitalis (isolates:9; rSTs:7 tree)
- Actinomyces viscosus (isolates:3; rSTs:1)
- Actinomyces vulturis (isolates:1; rSTs:1)
- Actinomyces weissii (isolates:1; rSTs:1)
- Actinomyces wuliandei (isolates:2; rSTs:2)
- Actinotignum (isolates:49; rSTs:35 tree)
- Ancrocorticia (isolates:1; rSTs:1)
- Ancrocorticia populi (isolates:1; rSTs:1)
- Arcanobacterium (isolates:55; rSTs:39 tree)
- Arcanobacterium bovis (isolates:1; rSTs:1)
- Arcanobacterium buesumense (isolates:1; rSTs:1)
- Arcanobacterium haemolyticum (isolates:5; rSTs:3 tree)
- Arcanobacterium hippocoleae (isolates:1; rSTs:1)
- Arcanobacterium ihumii (isolates:1; rSTs:1)
- Arcanobacterium phocae (isolates:42; rSTs:28 tree)
- Arcanobacterium phocisimile (isolates:1; rSTs:1)
- Arcanobacterium pinnipediorum (isolates:1; rSTs:1)
- Arcanobacterium pluranimalium (isolates:1; rSTs:1)
- Arcanobacterium urinimassiliense (isolates:1; rSTs:1)
- Boudabousia (isolates:4; rSTs:4 tree)
- Bowdeniella (isolates:3; rSTs:3 tree)
- Buchananella (isolates:3; rSTs:3 tree)
- Changpingibacter (isolates:2; rSTs:2)
- Changpingibacter yushuensis (isolates:2; rSTs:2)
- Flaviflexus (isolates:8; rSTs:6 tree)
- Gleimia (isolates:5; rSTs:5 tree)
- Mobiluncus (isolates:53; rSTs:43 tree)
- Nanchangia (isolates:2; rSTs:1)
- Nanchangia anserum (isolates:2; rSTs:1)
- Neoactinobaculum (isolates:1; rSTs:1)
- Neoactinobaculum massilliense (isolates:1; rSTs:1)
- Peptidiphaga (isolates:1; rSTs:1)
- Peptidiphaga gingivicola (isolates:1; rSTs:1)
- Schaalia (isolates:41; rSTs:30 tree)
- Schaalia canis (isolates:1; rSTs:1)
- Schaalia cardiffensis (isolates:3; rSTs:2)
- Schaalia georgiae (isolates:3; rSTs:3 tree)
- Schaalia hyovaginalis (isolates:3; rSTs:3 tree)
- Schaalia meyeri (isolates:3; rSTs:2)
- Schaalia odontolytica (isolates:15; rSTs:8 tree)
- Schaalia radingae (isolates:1; rSTs:1)
- Schaalia sp. (isolates:4; rSTs:3 tree)
- Schaalia suimastitidis (isolates:1; rSTs:1)
- Schaalia turicensis (isolates:6; rSTs:5 tree)
- Schaalia vaccimaxillae (isolates:1; rSTs:1)
- Scrofimicrobium (isolates:1; rSTs:1)
- Scrofimicrobium canadense (isolates:1; rSTs:1)
- Trueperella (isolates:45; rSTs:39 tree)
- Trueperella abortisuis (isolates:2; rSTs:2)
- Trueperella bernardiae (isolates:7; rSTs:6 tree)
- Trueperella bialowiezensis (isolates:1; rSTs:1)
- Trueperella bonasi (isolates:1; rSTs:1)
- Trueperella pecoris (isolates:4; rSTs:4 tree)
- Trueperella pyogenes (isolates:28; rSTs:23 tree)
- Trueperella sp. (isolates:2; rSTs:2)
- Varibaculum (isolates:11; rSTs:8 tree)
- Winkia (isolates:19; rSTs:17 tree)
- Actinomycetaceae (isolates:495; rSTs:380 tree)
- Actinopolysporales (isolates:16; rSTs:14 tree)
- Actinopolysporaceae (isolates:16; rSTs:14 tree)
- Actinopolyspora (isolates:15; rSTs:13 tree)
- Actinopolyspora alba (isolates:1; rSTs:1)
- Actinopolyspora biskrensis (isolates:1; rSTs:1)
- Actinopolyspora erythraea (isolates:2; rSTs:1)
- Actinopolyspora halophila (isolates:1; rSTs:1)
- Actinopolyspora mortivallis (isolates:2; rSTs:2)
- Actinopolyspora mzabensis (isolates:1; rSTs:1)
- Actinopolyspora righensis (isolates:2; rSTs:2)
- Actinopolyspora saharensis (isolates:1; rSTs:1)
- Actinopolyspora sp. (isolates:3; rSTs:2 tree)
- Actinopolyspora xinjiangensis (isolates:1; rSTs:1)
- Haloactinomyces (isolates:1; rSTs:1)
- Haloactinomyces albus (isolates:1; rSTs:1)
- Actinopolyspora (isolates:15; rSTs:13 tree)
- Actinopolysporaceae (isolates:16; rSTs:14 tree)
- Bifidobacteriales (isolates:3618; rSTs:1606)
- Bifidobacteriaceae (isolates:3617; rSTs:1606)
- Aeriscardovia (isolates:2; rSTs:1)
- Aeriscardovia aeriphila (isolates:2; rSTs:1)
- Alloscardovia (isolates:25; rSTs:24 tree)
- Bifidobacterium (isolates:3487; rSTs:1485)
- Bifidobacterium actinocoloniiforme (isolates:3; rSTs:1)
- Bifidobacterium adolescentis (isolates:563; rSTs:190 tree)
- Bifidobacterium aemilianum (isolates:1; rSTs:1)
- Bifidobacterium aerophilum (isolates:1; rSTs:1)
- Bifidobacterium aesculapii (isolates:1; rSTs:1)
- Bifidobacterium amazonense (isolates:1; rSTs:1)
- Bifidobacterium angulatum (isolates:10; rSTs:3 tree)
- Bifidobacterium animalis (isolates:167; rSTs:21 tree)
- Bifidobacterium anseris (isolates:1; rSTs:1)
- Bifidobacterium apousia (isolates:3; rSTs:3 tree)
- Bifidobacterium apri (isolates:1; rSTs:1)
- Bifidobacterium aquikefiri (isolates:1; rSTs:1)
- Bifidobacterium asteroides (isolates:7; rSTs:6 tree)
- Bifidobacterium avesanii (isolates:2; rSTs:1)
- Bifidobacterium biavatii (isolates:2; rSTs:2)
- Bifidobacterium bifidum (isolates:230; rSTs:83 tree)
- Bifidobacterium bohemicum (isolates:3; rSTs:1)
- Bifidobacterium bombi (isolates:2; rSTs:1)
- Bifidobacterium boum (isolates:5; rSTs:3 tree)
- Bifidobacterium breve (isolates:236; rSTs:115 tree)
- Bifidobacterium callimiconis (isolates:2; rSTs:2)
- Bifidobacterium callitrichidarum (isolates:1; rSTs:1)
- Bifidobacterium callitrichos (isolates:4; rSTs:4 tree)
- Bifidobacterium canis (isolates:1; rSTs:1)
- Bifidobacterium castoris (isolates:1; rSTs:1)
- Bifidobacterium catenulatum (isolates:37; rSTs:30 tree)
- Bifidobacterium catulorum (isolates:1; rSTs:1)
- Bifidobacterium cebidarum (isolates:1; rSTs:1)
- Bifidobacterium choerinum (isolates:4; rSTs:2)
- Bifidobacterium choladohabitans (isolates:5; rSTs:5 tree)
- Bifidobacterium choloepi (isolates:1; rSTs:1)
- Bifidobacterium colobi (isolates:1; rSTs:1)
- Bifidobacterium commune (isolates:2; rSTs:1)
- Bifidobacterium coryneforme (isolates:2; rSTs:1)
- Bifidobacterium criceti (isolates:1; rSTs:1)
- Bifidobacterium crudilactis (isolates:1; rSTs:1)
- Bifidobacterium cuniculi (isolates:2; rSTs:1)
- Bifidobacterium dentium (isolates:47; rSTs:36 tree)
- Bifidobacterium dolichotidis (isolates:1; rSTs:1)
- Bifidobacterium erythrocebi (isolates:1)
- Bifidobacterium eulemuris (isolates:2; rSTs:1)
- Bifidobacterium felsineum (isolates:2; rSTs:2)
- Bifidobacterium gallicum (isolates:4; rSTs:1)
- Bifidobacterium goeldii (isolates:1; rSTs:1)
- Bifidobacterium hapali (isolates:1; rSTs:1)
- Bifidobacterium imperatoris (isolates:2; rSTs:1)
- Bifidobacterium indicum (isolates:2; rSTs:1)
- Bifidobacterium italicum (isolates:1; rSTs:1)
- Bifidobacterium jacchi (isolates:1; rSTs:1)
- Bifidobacterium lemurum (isolates:3; rSTs:1)
- Bifidobacterium leontopitheci (isolates:1; rSTs:1)
- Bifidobacterium longum (isolates:1390; rSTs:555 tree)
- Bifidobacterium magnum (isolates:3; rSTs:2)
- Bifidobacterium margollesii (isolates:1; rSTs:1)
- Bifidobacterium mellis (isolates:1; rSTs:1)
- Bifidobacterium merycicum (isolates:4; rSTs:3 tree)
- Bifidobacterium miconis (isolates:1; rSTs:1)
- Bifidobacterium miconisargentati (isolates:1; rSTs:1)
- Bifidobacterium minimum (isolates:3; rSTs:1)
- Bifidobacterium mizhiense (isolates:1; rSTs:1)
- Bifidobacterium mongoliense (isolates:3; rSTs:2)
- Bifidobacterium moraviense (isolates:1)
- Bifidobacterium moukalabense (isolates:13; rSTs:6 tree)
- Bifidobacterium myosotis (isolates:2; rSTs:2)
- Bifidobacterium oedipodis (isolates:1)
- Bifidobacterium olomucense (isolates:1)
- Bifidobacterium panos (isolates:1)
- Bifidobacterium parmae (isolates:1; rSTs:1)
- Bifidobacterium phasiani (isolates:1; rSTs:1)
- Bifidobacterium platyrrhinorum (isolates:1; rSTs:1)
- Bifidobacterium pluvialisilvae (isolates:1; rSTs:1)
- Bifidobacterium polysaccharolyticum (isolates:5; rSTs:5 tree)
- Bifidobacterium pongonis (isolates:1; rSTs:1)
- Bifidobacterium porcinum (isolates:1; rSTs:1)
- Bifidobacterium primatium (isolates:1; rSTs:1)
- Bifidobacterium pseudocatenulatum (isolates:430; rSTs:173 tree)
- Bifidobacterium pseudolongum (isolates:97; rSTs:72 tree)
- Bifidobacterium psychraerophilum (isolates:3; rSTs:1)
- Bifidobacterium pullorum (isolates:14; rSTs:11 tree)
- Bifidobacterium ramosum (isolates:2; rSTs:1)
- Bifidobacterium reuteri (isolates:3; rSTs:2)
- Bifidobacterium rousetti (isolates:1; rSTs:1)
- Bifidobacterium ruminantium (isolates:5; rSTs:3 tree)
- Bifidobacterium saguini (isolates:3; rSTs:1)
- Bifidobacterium saguinibicoloris (isolates:1; rSTs:1)
- Bifidobacterium saimiriisciurei (isolates:1; rSTs:1)
- Bifidobacterium samirii (isolates:1; rSTs:1)
- Bifidobacterium santillanense (isolates:1; rSTs:1)
- Bifidobacterium scaligerum (isolates:1; rSTs:1)
- Bifidobacterium scardovii (isolates:6; rSTs:3 tree)
- Bifidobacterium simiarum (isolates:2; rSTs:2)
- Bifidobacterium simiiventris (isolates:1; rSTs:1)
- Bifidobacterium sp. (isolates:71; rSTs:63 tree)
- Bifidobacterium stellenboschense (isolates:1; rSTs:1)
- Bifidobacterium subtile (isolates:4; rSTs:1)
- Bifidobacterium thermacidophilum (isolates:3; rSTs:1)
- Bifidobacterium thermophilum (isolates:7; rSTs:5 tree)
- Bifidobacterium tibiigranuli (isolates:2; rSTs:1)
- Bifidobacterium tissieri (isolates:3; rSTs:2)
- Bifidobacterium tsurumiense (isolates:4; rSTs:2)
- Bifidobacterium vansinderenii (isolates:1; rSTs:1)
- Bifidobacterium vespertilionis (isolates:3; rSTs:2)
- Bifidobacterium xylocopae (isolates:1; rSTs:1)
- Bombiscardovia (isolates:1; rSTs:1)
- Bombiscardovia coagulans (isolates:1; rSTs:1)
- Galliscardovia (isolates:1; rSTs:1)
- Galliscardovia ingluviei (isolates:1; rSTs:1)
- Gardnerella (isolates:88; rSTs:88 tree)
- Gardnerella greenwoodii (isolates:4; rSTs:3 tree)
- Gardnerella leopoldii (isolates:1; rSTs:1)
- Gardnerella pickettii (isolates:6; rSTs:4 tree)
- Gardnerella piotii (isolates:4; rSTs:2)
- Gardnerella sp. (isolates:5; rSTs:31 tree)
- Gardnerella swidsinskii (isolates:4; rSTs:3 tree)
- Gardnerella vaginalis (isolates:64; rSTs:44 tree)
- Parascardovia (isolates:4; rSTs:2)
- Parascardovia denticolens (isolates:4; rSTs:2)
- Pseudoscardovia (isolates:3; rSTs:2)
- Scardovia (isolates:6; rSTs:2)
- Aeriscardovia (isolates:2; rSTs:1)
- Bifidobacteriaceae (isolates:3617; rSTs:1606)
- Candidatus Nanopelagicales (isolates:16; rSTs:16 tree)
- Candidatus Nanopelagicaceae (isolates:16; rSTs:16 tree)
- Candidatus Nanopelagicus (isolates:3; rSTs:3 tree)
- Candidatus Planktophila (isolates:13; rSTs:13 tree)
- Candidatus Planktophila dulcis (isolates:3; rSTs:3 tree)
- Candidatus Planktophila lacus (isolates:3; rSTs:3 tree)
- Candidatus Planktophila limnetica (isolates:1; rSTs:1)
- Candidatus Planktophila sulfonica (isolates:1; rSTs:1)
- Candidatus Planktophila vernalis (isolates:1; rSTs:1)
- Candidatus Planktophila versatilis (isolates:4; rSTs:4 tree)
- Candidatus Nanopelagicaceae (isolates:16; rSTs:16 tree)
- Catenulisporales (isolates:10; rSTs:10 tree)
- Cryptosporangiales (isolates:3; rSTs:3 tree)
- Frankiales (isolates:91; rSTs:43 tree)
- Frankiaceae (isolates:91; rSTs:43 tree)
- Frankia (isolates:65; rSTs:29 tree)
- Candidatus Frankia alpina (isolates:2; rSTs:2)
- Candidatus Frankia meridionalis (isolates:2)
- Candidatus Frankia nodulisporulans (isolates:3; rSTs:1)
- Frankia alni (isolates:1; rSTs:1)
- Frankia canadensis (isolates:2; rSTs:1)
- Frankia casuarinae (isolates:4; rSTs:1)
- Frankia gtarii (isolates:2; rSTs:2)
- Frankia nepalensis (isolates:4; rSTs:1)
- Frankia sp. (isolates:42; rSTs:17 tree)
- Frankia tisae (isolates:1; rSTs:1)
- Frankia torreyi (isolates:1; rSTs:1)
- Frankia umida (isolates:1; rSTs:1)
- Parafrankia (isolates:9; rSTs:6 tree)
- Protofrankia (isolates:10; rSTs:2)
- Pseudofrankia (isolates:7; rSTs:6 tree)
- Frankia (isolates:65; rSTs:29 tree)
- Frankiaceae (isolates:91; rSTs:43 tree)
- Geodermatophilales (isolates:117; rSTs:104 tree)
- Antricoccaceae (isolates:1; rSTs:1)
- Geodermatophilaceae (isolates:116; rSTs:103 tree)
- Blastococcus (isolates:42; rSTs:39 tree)
- Blastococcus aggregatus (isolates:1; rSTs:1)
- Blastococcus atacamensis (isolates:1; rSTs:1)
- Blastococcus aurantiacus (isolates:1; rSTs:1)
- Blastococcus capsensis (isolates:1; rSTs:1)
- Blastococcus carthaginiensis (isolates:1; rSTs:1)
- Blastococcus colisei (isolates:1; rSTs:1)
- Blastococcus fimeti (isolates:1; rSTs:1)
- Blastococcus haudaquaticus (isolates:1; rSTs:1)
- Blastococcus litoris (isolates:1; rSTs:1)
- Blastococcus mobilis (isolates:1; rSTs:1)
- Blastococcus saxobsidens (isolates:3; rSTs:1)
- Blastococcus sp. (isolates:25; rSTs:26 tree)
- Blastococcus tunisiensis (isolates:1)
- Blastococcus xanthinilyticus (isolates:1; rSTs:1)
- Candidatus Blastococcus massiliensis (isolates:2; rSTs:1)
- Cumulibacter (isolates:2; rSTs:2)
- Geodermatophilus (isolates:28; rSTs:27 tree)
- Geodermatophilus africanus (isolates:1; rSTs:1)
- Geodermatophilus amargosae (isolates:1; rSTs:1)
- Geodermatophilus aquaeductus (isolates:1; rSTs:1)
- Geodermatophilus bullaregiensis (isolates:1; rSTs:1)
- Geodermatophilus chilensis (isolates:1; rSTs:1)
- Geodermatophilus dictyosporus (isolates:1; rSTs:1)
- Geodermatophilus nigrescens (isolates:1; rSTs:1)
- Geodermatophilus normandii (isolates:1; rSTs:1)
- Geodermatophilus obscurus (isolates:2; rSTs:2)
- Geodermatophilus poikilotrophus (isolates:1; rSTs:1)
- Geodermatophilus pulveris (isolates:1; rSTs:1)
- Geodermatophilus ruber (isolates:1; rSTs:1)
- Geodermatophilus sabuli (isolates:2; rSTs:1)
- Geodermatophilus saharensis (isolates:1; rSTs:1)
- Geodermatophilus siccatus (isolates:1; rSTs:1)
- Geodermatophilus sp. (isolates:9; rSTs:9 tree)
- Geodermatophilus telluris (isolates:1; rSTs:1)
- Geodermatophilus tzadiensis (isolates:1; rSTs:1)
- Goekera (isolates:4; rSTs:2)
- Goekera deserti (isolates:4; rSTs:2)
- Klenkia (isolates:9; rSTs:8 tree)
- Modestobacter (isolates:28; rSTs:22 tree)
- Modestobacter altitudinis (isolates:1; rSTs:1)
- Modestobacter caceresii (isolates:1; rSTs:1)
- Modestobacter excelsi (isolates:1; rSTs:1)
- Modestobacter italicus (isolates:1; rSTs:1)
- Modestobacter marinus (isolates:3; rSTs:2)
- Modestobacter multiseptatus (isolates:1; rSTs:1)
- Modestobacter muralis (isolates:2; rSTs:1)
- Modestobacter roseus (isolates:2; rSTs:1)
- Modestobacter sp. (isolates:14; rSTs:12 tree)
- Modestobacter versicolor (isolates:2; rSTs:1)
- Petropleomorpha (isolates:1; rSTs:1)
- Petropleomorpha daqingensis (isolates:1; rSTs:1)
- Trujillonella (isolates:2; rSTs:2)
- Trujillella endophytica (isolates:2; rSTs:2)
- Blastococcus (isolates:42; rSTs:39 tree)
- Glycomycetales (isolates:34; rSTs:28 tree)
- Glycomycetaceae (isolates:34; rSTs:28 tree)
- Glycomyces (isolates:29; rSTs:23 tree)
- Glycomyces albidus (isolates:1; rSTs:1)
- Glycomyces algeriensis (isolates:3; rSTs:2)
- Glycomyces amatae (isolates:1; rSTs:1)
- Glycomyces arizonensis (isolates:1; rSTs:1)
- Glycomyces artemisiae (isolates:1; rSTs:1)
- Glycomyces buryatensis (isolates:1; rSTs:1)
- Glycomyces dulcitolivorans (isolates:1; rSTs:1)
- Glycomyces harbinensis (isolates:2; rSTs:1)
- Glycomyces lechevalierae (isolates:2; rSTs:1)
- Glycomyces luteolus (isolates:1; rSTs:1)
- Glycomyces niveus (isolates:1)
- Glycomyces paridis (isolates:1; rSTs:1)
- Glycomyces salinus (isolates:1; rSTs:1)
- Glycomyces sambucus (isolates:1; rSTs:1)
- Glycomyces sp. (isolates:6; rSTs:5 tree)
- Glycomyces tenuis (isolates:2; rSTs:1)
- Glycomyces terrestris (isolates:1; rSTs:1)
- Glycomyces tritici (isolates:1; rSTs:1)
- Glycomyces xiaoerkulensis (isolates:1; rSTs:1)
- Haloglycomyces (isolates:1; rSTs:1)
- Haloglycomyces albus (isolates:1; rSTs:1)
- Natronoglycomyces (isolates:1; rSTs:1)
- Natronoglycomyces albus (isolates:1; rSTs:1)
- Stackebrandtia (isolates:3; rSTs:3 tree)
- Glycomyces (isolates:29; rSTs:23 tree)
- Glycomycetaceae (isolates:34; rSTs:28 tree)
- Jatrophihabitantales (isolates:5; rSTs:5 tree)
- Jiangellales (isolates:22; rSTs:19 tree)
- Jiangellaceae (isolates:22; rSTs:19 tree)
- Haloactinopolyspora (isolates:2; rSTs:1)
- Haloactinopolyspora alba (isolates:2; rSTs:1)
- Jiangella (isolates:14; rSTs:13 tree)
- Jiangella alba (isolates:2; rSTs:1)
- Jiangella alkaliphila (isolates:2; rSTs:2)
- Jiangella anatolica (isolates:1; rSTs:1)
- Jiangella asiatica (isolates:1; rSTs:1)
- Jiangella aurantiaca (isolates:1; rSTs:1)
- Jiangella endophytica (isolates:1; rSTs:1)
- Jiangella gansuensis (isolates:1; rSTs:1)
- Jiangella mangrovi (isolates:1; rSTs:1)
- Jiangella muralis (isolates:1; rSTs:1)
- Jiangella rhizosphaerae (isolates:1; rSTs:1)
- Jiangella sp. (isolates:1; rSTs:1)
- Jiangella ureilytica (isolates:1; rSTs:1)
- Phytoactinopolyspora (isolates:6; rSTs:5 tree)
- Phytoactinopolyspora alkaliphila (isolates:1; rSTs:1)
- Phytoactinopolyspora endophytica (isolates:1)
- Phytoactinopolyspora halophila (isolates:1; rSTs:1)
- Phytoactinopolyspora halotolerans (isolates:1; rSTs:1)
- Phytoactinopolyspora limicola (isolates:1; rSTs:1)
- Phytoactinopolyspora mesophila (isolates:1; rSTs:1)
- Haloactinopolyspora (isolates:2; rSTs:1)
- Jiangellaceae (isolates:22; rSTs:19 tree)
- Kineosporiales (isolates:32; rSTs:25 tree)
- Kineosporiaceae (isolates:32; rSTs:25 tree)
- Angustibacter (isolates:2; rSTs:1)
- Kineococcus (isolates:12; rSTs:12 tree)
- Kineococcus aurantiacus (isolates:1; rSTs:1)
- Kineococcus indalonis (isolates:1; rSTs:1)
- Kineococcus radiotolerans (isolates:2; rSTs:2)
- Kineococcus rhizosphaerae (isolates:1; rSTs:1)
- Kineococcus rubinsiae (isolates:1; rSTs:1)
- Kineococcus siccus (isolates:1; rSTs:1)
- Kineococcus sp. (isolates:3; rSTs:3)
- Kineococcus vitellinus (isolates:1; rSTs:1)
- Kineococcus xinjiangensis (isolates:1; rSTs:1)
- Kineosporia (isolates:11; rSTs:7 tree)
- Kineosporia aurantiaca (isolates:1)
- Kineosporia babensis (isolates:1; rSTs:1)
- Kineosporia corallincola (isolates:1; rSTs:1)
- Kineosporia mesophila (isolates:1; rSTs:1)
- Kineosporia rhamnosa (isolates:1)
- Kineosporia rhizophila (isolates:2; rSTs:1)
- Kineosporia sp. (isolates:2; rSTs:2)
- Kineosporia succinea (isolates:2; rSTs:1)
- Pseudokineococcus (isolates:2; rSTs:2)
- Quadrisphaera (isolates:5; rSTs:3 tree)
- Kineosporiaceae (isolates:32; rSTs:25 tree)
- Kitasatosporales (isolates:3507; rSTs:2724)
- Carbonactinosporaceae (isolates:4; rSTs:3 tree)
- Streptomycetaceae (isolates:3503; rSTs:2721)
- Actinacidiphila (isolates:21; rSTs:17 tree)
- Actinacidiphila acididurans (isolates:1; rSTs:1)
- Actinacidiphila alni (isolates:1; rSTs:1)
- Actinacidiphila bryophytorum (isolates:4; rSTs:2)
- Actinacidiphila cocklensis (isolates:2; rSTs:1)
- Actinacidiphila epipremni (isolates:1; rSTs:1)
- Actinacidiphila glaucinigra (isolates:3; rSTs:3)
- Actinacidiphila guanduensis (isolates:1; rSTs:1)
- Actinacidiphila oryziradicis (isolates:1; rSTs:1)
- Actinacidiphila paucisporea (isolates:1; rSTs:1)
- Actinacidiphila rubida (isolates:2; rSTs:1)
- Actinacidiphila soli (isolates:1; rSTs:1)
- Actinacidiphila sp. (isolates:1; rSTs:1)
- Actinacidiphila yanglinensis (isolates:1; rSTs:1)
- Actinacidiphila yeochonensis (isolates:1; rSTs:1)
- Allostreptomyces (isolates:1; rSTs:1)
- Allostreptomyces psammosilenae (isolates:1; rSTs:1)
- Embleya (isolates:2; rSTs:2)
- Kitasatospora (isolates:68; rSTs:56 tree)
- Kitasatospora acidiphila (isolates:1; rSTs:1)
- Kitasatospora albolonga (isolates:1; rSTs:1)
- Kitasatospora atroaurantiaca (isolates:1; rSTs:1)
- Kitasatospora aureofaciens (isolates:6; rSTs:2)
- Kitasatospora azatica (isolates:1; rSTs:1)
- Kitasatospora cheerisanensis (isolates:1; rSTs:1)
- Kitasatospora cineracea (isolates:2; rSTs:2)
- Kitasatospora fiedleri (isolates:1; rSTs:1)
- Kitasatospora gansuensis (isolates:1; rSTs:1)
- Kitasatospora griseola (isolates:2; rSTs:2)
- Kitasatospora herbaricolor (isolates:4; rSTs:2)
- Kitasatospora humi (isolates:1; rSTs:1)
- Kitasatospora indigofera (isolates:1; rSTs:1)
- Kitasatospora kifunensis (isolates:1; rSTs:1)
- Kitasatospora mediocidica (isolates:1; rSTs:1)
- Kitasatospora misakiensis (isolates:1)
- Kitasatospora paracochleata (isolates:1; rSTs:1)
- Kitasatospora phosalacinea (isolates:2; rSTs:2)
- Kitasatospora purpeofusca (isolates:7; rSTs:5 tree)
- Kitasatospora setae (isolates:2; rSTs:1)
- Kitasatospora sp. (isolates:28; rSTs:26 tree)
- Kitasatospora viridis (isolates:1; rSTs:1)
- Kitasatospora xanthocidica (isolates:1; rSTs:1)
- Mangrovactinospora (isolates:1; rSTs:1)
- Mangrovactinospora gilvigrisea (isolates:1; rSTs:1)
- Peterkaempfera (isolates:2; rSTs:2)
- Phaeacidiphilus (isolates:1; rSTs:1)
- Phaeacidiphilus oryzae (isolates:1; rSTs:1)
- Streptacidiphilus (isolates:16; rSTs:13 tree)
- Streptacidiphilus albus (isolates:2; rSTs:1)
- Streptacidiphilus anmyonensis (isolates:1; rSTs:1)
- Streptacidiphilus carbonis (isolates:1; rSTs:1)
- Streptacidiphilus fuscans (isolates:1; rSTs:1)
- Streptacidiphilus jeojiense (isolates:1; rSTs:1)
- Streptacidiphilus jiangxiensis (isolates:2; rSTs:1)
- Streptacidiphilus melanogenes (isolates:1; rSTs:1)
- Streptacidiphilus neutrinimicus (isolates:1; rSTs:1)
- Streptacidiphilus pinicola (isolates:1; rSTs:1)
- Streptacidiphilus rugosus (isolates:1; rSTs:1)
- Streptacidiphilus sp. (isolates:4; rSTs:3 tree)
- Streptantibioticus (isolates:7; rSTs:7 tree)
- Streptomyces (isolates:3379; rSTs:2617)
- Candidatus Streptomyces massiliensis (isolates:1; rSTs:1)
- Streptomyces abikoensis (isolates:1; rSTs:1)
- Streptomyces abyssalis (isolates:2; rSTs:1)
- Streptomyces abyssomicinicus (isolates:1; rSTs:1)
- Streptomyces achromogenes (isolates:1; rSTs:1)
- Streptomyces acidicola (isolates:1; rSTs:1)
- Streptomyces acidipaludis (isolates:1; rSTs:1)
- Streptomyces acidiscabies (isolates:15; rSTs:5 tree)
- Streptomyces actinomycinicus (isolates:1; rSTs:1)
- Streptomyces actuosus (isolates:2; rSTs:1)
- Streptomyces aculeolatus (isolates:1; rSTs:1)
- Streptomyces adelaidensis (isolates:1; rSTs:1)
- Streptomyces adustus (isolates:1; rSTs:1)
- Streptomyces afghaniensis (isolates:1; rSTs:1)
- Streptomyces africanus (isolates:2; rSTs:2)
- Streptomyces agglomeratus (isolates:5; rSTs:4 tree)
- Streptomyces aidingensis (isolates:1; rSTs:1)
- Streptomyces akebiae (isolates:1; rSTs:1)
- Streptomyces alanosinicus (isolates:1; rSTs:1)
- Streptomyces albaduncus (isolates:2; rSTs:1)
- Streptomyces albicerus (isolates:1; rSTs:1)
- Streptomyces albidoflavus (isolates:49; rSTs:32 tree)
- Streptomyces albidus (ex Kaewkla and Franco 2022) (isolates:1; rSTs:1)
- Streptomyces albiflavescens (isolates:1; rSTs:1)
- Streptomyces albireticuli (isolates:5; rSTs:2)
- Streptomyces albofaciens (isolates:2; rSTs:1)
- Streptomyces alboflavus (isolates:3; rSTs:3 tree)
- Streptomyces albogriseolus (isolates:1; rSTs:1)
- Streptomyces alboniger (isolates:2; rSTs:1)
- Streptomyces albospinus (isolates:1; rSTs:1)
- Streptomyces alboverticillatus (isolates:1; rSTs:1)
- Streptomyces albovinaceus (isolates:1; rSTs:1)
- Streptomyces alboviridis (isolates:1; rSTs:1)
- Streptomyces albus (isolates:12; rSTs:7 tree)
- Streptomyces alfalfae (isolates:5; rSTs:3 tree)
- Streptomyces alkaliphilus (isolates:2; rSTs:1)
- Streptomyces alkaliterrae (isolates:3; rSTs:2)
- Streptomyces altiplanensis (isolates:1; rSTs:1)
- Streptomyces ambofaciens (isolates:2; rSTs:2)
- Streptomyces amritsarensis (isolates:1; rSTs:1)
- Streptomyces anandii (isolates:2; rSTs:1)
- Streptomyces anatolicus (isolates:1; rSTs:1)
- Streptomyces angustmyceticus (isolates:4; rSTs:2)
- Streptomyces anthocyanicus (isolates:4; rSTs:4 tree)
- Streptomyces antibioticus (isolates:1; rSTs:1)
- Streptomyces antimicrobicus (isolates:1; rSTs:1)
- Streptomyces antimycoticus (isolates:4; rSTs:4 tree)
- Streptomyces antioxidans (isolates:1; rSTs:1)
- Streptomyces anulatus (isolates:21; rSTs:18 tree)
- Streptomyces apocyni (isolates:1; rSTs:1)
- Streptomyces apricus (isolates:1; rSTs:1)
- Streptomyces aquilus (isolates:1; rSTs:1)
- Streptomyces arboris (isolates:1; rSTs:1)
- Streptomyces ardesiacus (isolates:2; rSTs:2)
- Streptomyces arenae (isolates:1; rSTs:1)
- Streptomyces argenteolus (isolates:1; rSTs:1)
- Streptomyces argyrophyllae (isolates:1; rSTs:1)
- Streptomyces armeniacus (isolates:1; rSTs:1)
- Streptomyces asiaticus (isolates:1; rSTs:1)
- Streptomyces asoensis (isolates:3; rSTs:2)
- Streptomyces atratus (isolates:4; rSTs:4 tree)
- Streptomyces atriruber (isolates:1; rSTs:1)
- Streptomyces atroolivaceus (isolates:2; rSTs:2)
- Streptomyces aurantiacus (isolates:1; rSTs:1)
- Streptomyces aurantiogriseus (isolates:1; rSTs:1)
- Streptomyces auratus (isolates:1; rSTs:1)
- Streptomyces aureocirculatus (isolates:2; rSTs:1)
- Streptomyces aureoverticillatus (isolates:1; rSTs:1)
- Streptomyces aureus (isolates:1; rSTs:1)
- Streptomyces autolyticus (isolates:1; rSTs:1)
- Streptomyces avermitilis (isolates:8; rSTs:1)
- Streptomyces avicenniae (isolates:1; rSTs:1)
- Streptomyces avidinii (isolates:1; rSTs:1)
- Streptomyces azureus (isolates:1; rSTs:1)
- Streptomyces baarnensis (isolates:2; rSTs:1)
- Streptomyces badius (isolates:2; rSTs:1)
- Streptomyces bambusae (isolates:1; rSTs:1)
- Streptomyces barkulensis (isolates:2; rSTs:1)
- Streptomyces barringtoniae (isolates:1; rSTs:1)
- Streptomyces bathyalis (isolates:1; rSTs:1)
- Streptomyces bauhiniae (isolates:2; rSTs:2)
- Streptomyces beihaiensis (isolates:1; rSTs:1)
- Streptomyces beijiangensis (isolates:1; rSTs:1)
- Streptomyces bellus (isolates:1; rSTs:1)
- Streptomyces benahoarensis (isolates:2; rSTs:1)
- Streptomyces bicolor (isolates:2; rSTs:1)
- Streptomyces bikiniensis (isolates:4; rSTs:1)
- Streptomyces bingchenggensis (isolates:1; rSTs:1)
- Streptomyces blattellae (isolates:1; rSTs:1)
- Streptomyces bluensis (isolates:1; rSTs:1)
- Streptomyces bobili (isolates:1)
- Streptomyces bohaiensis (isolates:1; rSTs:1)
- Streptomyces boluensis (isolates:1; rSTs:1)
- Streptomyces boncukensis (isolates:1; rSTs:1)
- Streptomyces botrytidirepellens (isolates:1; rSTs:1)
- Streptomyces bottropensis (isolates:3; rSTs:2)
- Streptomyces brasiliensis (isolates:1; rSTs:1)
- Streptomyces brasiliscabiei (isolates:1; rSTs:1)
- Streptomyces brevispora (isolates:3; rSTs:3)
- Streptomyces broussonetiae (isolates:1; rSTs:1)
- Streptomyces buecherae (isolates:8; rSTs:4 tree)
- Streptomyces bungoensis (isolates:1; rSTs:1)
- Streptomyces caatingaensis (isolates:1; rSTs:1)
- Streptomyces cacaoi (isolates:5; rSTs:3 tree)
- Streptomyces cadmiisoli (isolates:1; rSTs:1)
- Streptomyces caelestis (isolates:1; rSTs:1)
- Streptomyces caeruleatus (isolates:1; rSTs:1)
- Streptomyces cahuitamycinicus (isolates:1; rSTs:1)
- Streptomyces calidiresistens (isolates:1; rSTs:1)
- Streptomyces californicus (isolates:7; rSTs:5 tree)
- Streptomyces calvus (isolates:5; rSTs:3 tree)
- Streptomyces camponoticapitis (isolates:1; rSTs:1)
- Streptomyces canarius (isolates:1; rSTs:1)
- Streptomyces candidus (isolates:2; rSTs:1)
- Streptomyces cangkringensis (isolates:1; rSTs:1)
- Streptomyces caniferus (isolates:5; rSTs:5)
- Streptomyces caniscabiei (isolates:22; rSTs:5 tree)
- Streptomyces canus (isolates:15; rSTs:14 tree)
- Streptomyces capillispiralis (isolates:2; rSTs:1)
- Streptomyces capitiformicae (isolates:2; rSTs:1)
- Streptomyces capoamus (isolates:1)
- Streptomyces capuensis (isolates:2; rSTs:1)
- Streptomyces carminius (isolates:1; rSTs:1)
- Streptomyces carpinensis (isolates:1; rSTs:1)
- Streptomyces catenulae (isolates:1; rSTs:1)
- Streptomyces cathayae (isolates:1)
- Streptomyces cavernae (isolates:1; rSTs:1)
- Streptomyces cavourensis (isolates:5; rSTs:4 tree)
- Streptomyces cellostaticus (isolates:2; rSTs:1)
- Streptomyces cellulosae (isolates:1; rSTs:1)
- Streptomyces chartreusis (isolates:3; rSTs:1)
- Streptomyces chattanoogensis (isolates:1; rSTs:1)
- Streptomyces chengmaiensis (isolates:1; rSTs:1)
- Streptomyces chilikensis (isolates:1; rSTs:1)
- Streptomyces chitinivorans (isolates:1; rSTs:1)
- Streptomyces chrestomyceticus (isolates:3; rSTs:2)
- Streptomyces chromofuscus (isolates:2; rSTs:1)
- Streptomyces chryseus (isolates:4; rSTs:2)
- Streptomyces chumphonensis (isolates:1; rSTs:1)
- Streptomyces cinereoruber (isolates:5; rSTs:1)
- Streptomyces cinerochromogenes (isolates:1; rSTs:1)
- Streptomyces cinnabarinus (isolates:2; rSTs:1)
- Streptomyces cinnamoneus (isolates:4; rSTs:2)
- Streptomyces cirratus (isolates:1; rSTs:1)
- Streptomyces clavifer (isolates:3; rSTs:3)
- Streptomyces clavuligerus (isolates:31; rSTs:2)
- Streptomyces coacervatus (isolates:1; rSTs:1)
- Streptomyces coelicoflavus (isolates:8; rSTs:8 tree)
- Streptomyces coelicolor (isolates:13; rSTs:2)
- Streptomyces coeruleorubidus (isolates:2; rSTs:1)
- Streptomyces coffeae (isolates:1; rSTs:1)
- Streptomyces collinus (isolates:4; rSTs:2)
- Streptomyces colonosanans (isolates:1; rSTs:1)
- Streptomyces composti (isolates:1; rSTs:1)
- Streptomyces corallincola (isolates:1; rSTs:1)
- Streptomyces coralus (isolates:1; rSTs:1)
- Streptomyces corchorusii (isolates:1; rSTs:1)
- Streptomyces coriariae (isolates:1; rSTs:1)
- Streptomyces coryli (isolates:1; rSTs:1)
- Streptomyces corynorhini (isolates:1; rSTs:1)
- Streptomyces cupreus (isolates:1; rSTs:1)
- Streptomyces curacoi (isolates:1; rSTs:1)
- Streptomyces cyaneochromogenes (isolates:1; rSTs:1)
- Streptomyces cyaneofuscatus (isolates:7; rSTs:6 tree)
- Streptomyces cyaneogriseus (isolates:1; rSTs:1)
- Streptomyces cyaneus (isolates:1; rSTs:1)
- Streptomyces cyanogenus (isolates:1; rSTs:1)
- Streptomyces cylindrosporus (isolates:1; rSTs:1)
- Streptomyces cynarae (isolates:1; rSTs:1)
- Streptomyces daghestanicus (isolates:2; rSTs:1)
- Streptomyces dangxiongensis (isolates:1; rSTs:1)
- Streptomyces daqingensis (isolates:1; rSTs:1)
- Streptomyces davaonensis (isolates:1; rSTs:1)
- Streptomyces deccanensis (isolates:1; rSTs:1)
- Streptomyces decoyicus (isolates:6; rSTs:4)
- Streptomyces dengpaensis (isolates:1; rSTs:1)
- Streptomyces diacarni (isolates:1; rSTs:1)
- Streptomyces diastaticus (isolates:1; rSTs:1)
- Streptomyces dioscori (isolates:1; rSTs:1)
- Streptomyces djakartensis (isolates:1; rSTs:1)
- Streptomyces drozdowiczii (isolates:3; rSTs:1)
- Streptomyces durbertensis (isolates:1; rSTs:1)
- Streptomyces durhamensis (isolates:2; rSTs:2)
- Streptomyces durmitorensis (isolates:1; rSTs:1)
- Streptomyces durocortorensis (isolates:1; rSTs:1)
- Streptomyces dysideae (isolates:1; rSTs:1)
- Streptomyces echinatus (isolates:2; rSTs:1)
- Streptomyces echinoruber (isolates:1; rSTs:1)
- Streptomyces endocoffeicus (isolates:1; rSTs:1)
- Streptomyces erythrochromogenes (isolates:3; rSTs:3)
- Streptomyces eurocidicus (isolates:3; rSTs:1)
- Streptomyces europaeiscabiei (isolates:1; rSTs:1)
- Streptomyces eurythermus (isolates:1; rSTs:1)
- Streptomyces exfoliatus (isolates:2; rSTs:1)
- Streptomyces fagopyri (isolates:1; rSTs:1)
- Streptomyces ferrugineus (isolates:1; rSTs:1)
- Streptomyces ficellus (isolates:1; rSTs:1)
- Streptomyces filamentosus (isolates:3; rSTs:2)
- Streptomyces fildesensis (isolates:1; rSTs:1)
- Streptomyces filipinensis (isolates:1; rSTs:1)
- Streptomyces finlayi (isolates:1; rSTs:1)
- Streptomyces flaveolus (isolates:1; rSTs:1)
- Streptomyces flaveus (isolates:1)
- Streptomyces flavidovirens (isolates:1; rSTs:1)
- Streptomyces flavochromogenes (isolates:1; rSTs:1)
- Streptomyces flavofungini (isolates:2; rSTs:1)
- Streptomyces flavotricini (isolates:1; rSTs:1)
- Streptomyces flavovariabilis (isolates:1; rSTs:1)
- Streptomyces flavovirens (isolates:1; rSTs:1)
- Streptomyces fodineus (isolates:1; rSTs:1)
- Streptomyces formicae (isolates:1; rSTs:1)
- Streptomyces fradiae (isolates:2; rSTs:1)
- Streptomyces fragilis (isolates:2; rSTs:1)
- Streptomyces fructofermentans (isolates:1; rSTs:1)
- Streptomyces fulvorobeus (isolates:2; rSTs:1)
- Streptomyces fulvoviolaceus (isolates:2; rSTs:2)
- Streptomyces fulvoviridis (isolates:1; rSTs:1)
- Streptomyces fumanus (isolates:1; rSTs:1)
- Streptomyces fumigatiscleroticus (isolates:1; rSTs:1)
- Streptomyces fungicidicus (isolates:8; rSTs:1)
- Streptomyces fuscichromogenes (isolates:1; rSTs:1)
- Streptomyces fuscigenes (isolates:1; rSTs:1)
- Streptomyces galbus (isolates:1; rSTs:1)
- Streptomyces galilaeus (isolates:2; rSTs:1)
- Streptomyces gancidicus (isolates:1; rSTs:1)
- Streptomyces gardneri (isolates:3; rSTs:2)
- Streptomyces gelaticus (isolates:1; rSTs:1)
- Streptomyces genisteinicus (isolates:1; rSTs:1)
- Streptomyces geranii (isolates:1; rSTs:1)
- Streptomyces geysiriensis (isolates:2; rSTs:2)
- Streptomyces gilvifuscus (isolates:1; rSTs:1)
- Streptomyces gilvosporeus (isolates:1; rSTs:1)
- Streptomyces glaucescens (isolates:2; rSTs:2)
- Streptomyces glebosus (isolates:2; rSTs:1)
- Streptomyces globisporus (isolates:1; rSTs:1)
- Streptomyces globosus (isolates:1; rSTs:1)
- Streptomyces glomeratus (isolates:1; rSTs:1)
- Streptomyces gobiensis (isolates:1; rSTs:1)
- Streptomyces goshikiensis (isolates:5; rSTs:5 tree)
- Streptomyces gossypii (isolates:1; rSTs:1)
- Streptomyces gossypiisoli (isolates:1; rSTs:1)
- Streptomyces gougerotii (isolates:2; rSTs:1)
- Streptomyces graminilatus (isolates:1; rSTs:1)
- Streptomyces graminofaciens (isolates:1; rSTs:1)
- Streptomyces griseicoloratus (isolates:1; rSTs:1)
- Streptomyces griseiscabiei (isolates:3; rSTs:1)
- Streptomyces griseoaurantiacus (isolates:2; rSTs:2)
- Streptomyces griseocarneus (isolates:1; rSTs:1)
- Streptomyces griseochromogenes (isolates:2; rSTs:1)
- Streptomyces griseoflavus (isolates:1; rSTs:1)
- Streptomyces griseofuscus (isolates:4; rSTs:3 tree)
- Streptomyces griseoincarnatus (isolates:1; rSTs:1)
- Streptomyces griseolus (isolates:3; rSTs:3 tree)
- Streptomyces griseoluteus (isolates:1; rSTs:1)
- Streptomyces griseomycini (isolates:3; rSTs:2)
- Streptomyces griseorubens (isolates:1; rSTs:1)
- Streptomyces griseoruber (isolates:2; rSTs:1)
- Streptomyces griseorubiginosus (isolates:7; rSTs:6 tree)
- Streptomyces griseosporeus (isolates:1; rSTs:1)
- Streptomyces griseoviridis (isolates:2; rSTs:1)
- Streptomyces griseus (isolates:14; rSTs:5 tree)
- Streptomyces guryensis (isolates:1; rSTs:1)
- Streptomyces hainanensis (isolates:1; rSTs:1)
- Streptomyces haliclonae (isolates:1; rSTs:1)
- Streptomyces halobius (isolates:1; rSTs:1)
- Streptomyces halstedii (isolates:2; rSTs:2)
- Streptomyces harbinensis (isolates:2; rSTs:2)
- Streptomyces harenosi (isolates:1; rSTs:1)
- Streptomyces hawaiiensis (isolates:1; rSTs:1)
- Streptomyces heilongjiangensis (isolates:1; rSTs:1)
- Streptomyces herbicida (isolates:1)
- Streptomyces hilarionis (isolates:1; rSTs:1)
- Streptomyces himalayensis (isolates:2; rSTs:2)
- Streptomyces himastatinicus (isolates:1; rSTs:1)
- Streptomyces hiroshimensis (isolates:1; rSTs:1)
- Streptomyces hirsutus (isolates:3; rSTs:3)
- Streptomyces hokutonensis (isolates:1; rSTs:1)
- Streptomyces hoynatensis (isolates:1; rSTs:1)
- Streptomyces huasconensis (isolates:2; rSTs:1)
- Streptomyces huiliensis (isolates:1; rSTs:1)
- Streptomyces humi (isolates:1; rSTs:1)
- Streptomyces humicola (isolates:1; rSTs:1)
- Streptomyces humidus (isolates:1; rSTs:1)
- Streptomyces hundungensis (isolates:1; rSTs:1)
- Streptomyces hyaluromycini (isolates:1; rSTs:1)
- Streptomyces hyderabadensis (isolates:1; rSTs:1)
- Streptomyces hydrogenans (isolates:3; rSTs:1)
- Streptomyces hygroscopicus (isolates:9; rSTs:8 tree)
- Streptomyces iakyrus (isolates:2; rSTs:1)
- Streptomyces iconiensis (isolates:1; rSTs:1)
- Streptomyces incarnatus (isolates:2; rSTs:1)
- Streptomyces indiaensis (isolates:1; rSTs:1)
- Streptomyces indicus (isolates:1; rSTs:1)
- Streptomyces indonesiensis (isolates:1; rSTs:1)
- Streptomyces inhibens (isolates:2; rSTs:2)
- Streptomyces inusitatus (isolates:1; rSTs:1)
- Streptomyces ipomoeae (isolates:9; rSTs:5 tree)
- Streptomyces iranensis (isolates:2; rSTs:1)
- Streptomyces janthinus (isolates:2; rSTs:1)
- Streptomyces jeddahensis (isolates:1; rSTs:1)
- Streptomyces jietaisiensis (isolates:2; rSTs:2)
- Streptomyces jumonjinensis (isolates:1; rSTs:1)
- Streptomyces justiciae (isolates:3; rSTs:3 tree)
- Streptomyces kanamyceticus (isolates:2; rSTs:1)
- Streptomyces kanasensis (isolates:1; rSTs:1)
- Streptomyces kaniharaensis (isolates:1; rSTs:1)
- Streptomyces kasugaensis (isolates:2; rSTs:1)
- Streptomyces katrae (isolates:1; rSTs:1)
- Streptomyces katsurahamanus (isolates:1; rSTs:1)
- Streptomyces kebangsaanensis (isolates:1; rSTs:1)
- Streptomyces klenkii (isolates:1; rSTs:1)
- Streptomyces koelreuteriae (isolates:2; rSTs:1)
- Streptomyces koyangensis (isolates:2; rSTs:2)
- Streptomyces kronopolitis (isolates:1; rSTs:1)
- Streptomyces kurssanovii (isolates:1; rSTs:1)
- Streptomyces lacrimifluminis (isolates:1; rSTs:1)
- Streptomyces laculatispora (isolates:2; rSTs:1)
- Streptomyces lanatus (isolates:1; rSTs:1)
- Streptomyces lasalocidi (isolates:1; rSTs:1)
- Streptomyces lasiicapitis (isolates:1; rSTs:1)
- Streptomyces lateritius (isolates:1; rSTs:1)
- Streptomyces laurentii (isolates:1; rSTs:1)
- Streptomyces lavendofoliae (isolates:2; rSTs:2)
- Streptomyces lavendulae (isolates:6; rSTs:3 tree)
- Streptomyces lavenduligriseus (isolates:3; rSTs:3 tree)
- Streptomyces leeuwenhoekii (isolates:3; rSTs:2)
- Streptomyces liangshanensis (isolates:1; rSTs:1)
- Streptomyces libani (isolates:4; rSTs:2)
- Streptomyces lichenis (isolates:1; rSTs:1)
- Streptomyces lienomycini (isolates:1; rSTs:1)
- Streptomyces lilacinus (isolates:1; rSTs:1)
- Streptomyces liliifuscus (isolates:1; rSTs:1)
- Streptomyces liliiviolaceus (isolates:1; rSTs:1)
- Streptomyces lincolnensis (isolates:4; rSTs:2)
- Streptomyces litmocidini (isolates:1; rSTs:1)
- Streptomyces lividans (isolates:6; rSTs:3 tree)
- Streptomyces lomondensis (isolates:2; rSTs:1)
- Streptomyces lonarensis (isolates:1; rSTs:1)
- Streptomyces longhuiensis (isolates:1; rSTs:1)
- Streptomyces longisporoflavus (isolates:1; rSTs:1)
- Streptomyces longispororuber (isolates:1; rSTs:1)
- Streptomyces longwoodensis (isolates:1; rSTs:1)
- Streptomyces lucensis (isolates:2; rSTs:1)
- Streptomyces lunaelactis (isolates:18; rSTs:16 tree)
- Streptomyces luridiscabiei (isolates:1; rSTs:1)
- Streptomyces lushanensis (isolates:1; rSTs:1)
- Streptomyces luteocolor (isolates:1; rSTs:1)
- Streptomyces luteogriseus (isolates:4; rSTs:3)
- Streptomyces luteolifulvus (isolates:1; rSTs:1)
- Streptomyces luteoverticillatus (isolates:1; rSTs:1)
- Streptomyces lycii (isolates:1; rSTs:1)
- Streptomyces lydicamycinicus (isolates:2; rSTs:2)
- Streptomyces lydicus (isolates:7; rSTs:5 tree)
- Streptomyces lysosuperificus (isolates:1; rSTs:1)
- Streptomyces macrolidinus (isolates:1; rSTs:1)
- Streptomyces malachitofuscus (isolates:1; rSTs:1)
- Streptomyces malaysiense (isolates:1; rSTs:1)
- Streptomyces malaysiensis (isolates:2; rSTs:1)
- Streptomyces mangrovisoli (isolates:1; rSTs:1)
- Streptomyces marianii (isolates:1; rSTs:1)
- Streptomyces marincola (isolates:2; rSTs:2)
- Streptomyces marispadix (isolates:1; rSTs:1)
- Streptomyces marokkonensis (isolates:1; rSTs:1)
- Streptomyces mashuensis (isolates:1; rSTs:1)
- Streptomyces massasporeus (isolates:1; rSTs:1)
- Streptomyces mediolani (isolates:1; rSTs:1)
- Streptomyces megasporus (isolates:1; rSTs:1)
- Streptomyces melanogenes (isolates:3; rSTs:3)
- Streptomyces melanosporofaciens (isolates:1; rSTs:1)
- Streptomyces meridianus (isolates:1; rSTs:1)
- Streptomyces mesophilus (isolates:1; rSTs:1)
- Streptomyces mexicanus (isolates:3; rSTs:1)
- Streptomyces microflavus (isolates:2; rSTs:2)
- Streptomyces milbemycinicus (isolates:1; rSTs:1)
- Streptomyces mimosae (isolates:1; rSTs:1)
- Streptomyces minutiscleroticus (isolates:2; rSTs:2)
- Streptomyces mirabilis (isolates:1; rSTs:1)
- Streptomyces misionensis (isolates:2; rSTs:2)
- Streptomyces mobaraensis (isolates:5; rSTs:3 tree)
- Streptomyces monashensis (isolates:1; rSTs:1)
- Streptomyces monomycini (isolates:2; rSTs:1)
- Streptomyces montanisoli (isolates:1; rSTs:1)
- Streptomyces montanus (isolates:1; rSTs:1)
- Streptomyces morookaense (isolates:2; rSTs:1)
- Streptomyces muensis (isolates:1; rSTs:1)
- Streptomyces murinus (isolates:9; rSTs:7 tree)
- Streptomyces musisoli (isolates:1; rSTs:1)
- Streptomyces mutabilis (isolates:2; rSTs:2)
- Streptomyces mutomycini (isolates:1; rSTs:1)
- Streptomyces naganishii (isolates:2; rSTs:1)
- Streptomyces nanshensis (isolates:2; rSTs:1)
- Streptomyces narbonensis (isolates:1; rSTs:1)
- Streptomyces natalensis (isolates:2; rSTs:1)
- Streptomyces netropsis (isolates:2; rSTs:1)
- Streptomyces neyagawaensis (isolates:3; rSTs:1)
- Streptomyces niger (isolates:1; rSTs:1)
- Streptomyces nigra (isolates:1; rSTs:1)
- Streptomyces nigrescens (isolates:1; rSTs:1)
- Streptomyces niphimycinicus (isolates:1; rSTs:1)
- Streptomyces nitrosporeus (isolates:2; rSTs:1)
- Streptomyces niveiscabiei (isolates:2; rSTs:2)
- Streptomyces niveoruber (isolates:1; rSTs:1)
- Streptomyces niveus (isolates:6; rSTs:5 tree)
- Streptomyces nodosus (isolates:4; rSTs:2)
- Streptomyces nojiriensis (isolates:4; rSTs:2)
- Streptomyces noursei (isolates:14; rSTs:9 tree)
- Streptomyces novaecaesareae (isolates:1; rSTs:1)
- Streptomyces nymphaeiformis (isolates:1; rSTs:1)
- Streptomyces oceani (isolates:1; rSTs:1)
- Streptomyces ochraceiscleroticus (isolates:1; rSTs:1)
- Streptomyces odonnellii (isolates:1; rSTs:1)
- Streptomyces odorifer (isolates:1; rSTs:1)
- Streptomyces olindensis (isolates:1; rSTs:1)
- Streptomyces olivaceoviridis (isolates:1; rSTs:1)
- Streptomyces olivaceus (isolates:43; rSTs:23 tree)
- Streptomyces olivochromogenes (isolates:2; rSTs:1)
- Streptomyces olivoreticuli (isolates:2; rSTs:2)
- Streptomyces olivoverticillatus (isolates:1; rSTs:1)
- Streptomyces omiyaensis (isolates:1; rSTs:1)
- Streptomyces orinoci (isolates:1; rSTs:1)
- Streptomyces ortus (isolates:1; rSTs:1)
- Streptomyces oryzae (isolates:1; rSTs:1)
- Streptomyces ossamyceticus (isolates:2; rSTs:2)
- Streptomyces otsuchiensis (isolates:1; rSTs:1)
- Streptomyces pacificus (isolates:1; rSTs:1)
- Streptomyces pactum (isolates:2; rSTs:1)
- Streptomyces pakalii (isolates:1; rSTs:1)
- Streptomyces palmae (isolates:1; rSTs:1)
- Streptomyces paludis (isolates:1; rSTs:1)
- Streptomyces panaciradicis (isolates:1; rSTs:1)
- Streptomyces paradoxus (isolates:1; rSTs:1)
- Streptomyces paromomycinus (isolates:1; rSTs:1)
- Streptomyces parvulus (isolates:7; rSTs:5 tree)
- Streptomyces parvus (isolates:4; rSTs:3 tree)
- Streptomyces pathocidini (isolates:1; rSTs:1)
- Streptomyces peruviensis (isolates:1; rSTs:1)
- Streptomyces peucetius (isolates:1; rSTs:1)
- Streptomyces phaeochromogenes (isolates:6; rSTs:6)
- Streptomyces phaeofaciens (isolates:2; rSTs:1)
- Streptomyces phaeolivaceus (isolates:1; rSTs:1)
- Streptomyces phaeoluteigriseus (isolates:2; rSTs:3 tree)
- Streptomyces phyllanthi (isolates:1; rSTs:1)
- Streptomyces physcomitrii (isolates:1; rSTs:1)
- Streptomyces phytophilus (isolates:1)
- Streptomyces pilosus (isolates:2; rSTs:2)
- Streptomyces pini (isolates:1; rSTs:1)
- Streptomyces pinistramenti (isolates:1; rSTs:1)
- Streptomyces piniterrae (isolates:1; rSTs:1)
- Streptomyces platensis (isolates:3; rSTs:2)
- Streptomyces plicatus (isolates:1; rSTs:1)
- Streptomyces plumbidurans (isolates:1; rSTs:1)
- Streptomyces pluricolorescens (isolates:1; rSTs:1)
- Streptomyces pluripotens (isolates:2; rSTs:1)
- Streptomyces polyasparticus (isolates:1; rSTs:1)
- Streptomyces polychromogenes (isolates:1; rSTs:1)
- Streptomyces poonensis (isolates:2; rSTs:1)
- Streptomyces populi (isolates:1; rSTs:1)
- Streptomyces poriferorum (isolates:2; rSTs:1)
- Streptomyces prasinopilosus (isolates:3; rSTs:1)
- Streptomyces prasinus (isolates:4; rSTs:3)
- Streptomyces pratensis (isolates:1; rSTs:1)
- Streptomyces pristinaespiralis (isolates:3; rSTs:2)
- Streptomyces prunicolor (isolates:3; rSTs:2)
- Streptomyces pseudogriseolus (isolates:1; rSTs:1)
- Streptomyces pseudovenezuelae (isolates:6; rSTs:5)
- Streptomyces puniciscabiei (isolates:2; rSTs:1)
- Streptomyces purpurascens (isolates:2; rSTs:2)
- Streptomyces purpureus (isolates:2; rSTs:2)
- Streptomyces purpurogeneiscleroticus (isolates:1; rSTs:1)
- Streptomyces pyridomyceticus (isolates:1; rSTs:1)
- Streptomyces qaidamensis (isolates:1; rSTs:1)
- Streptomyces qinglanensis (isolates:2; rSTs:1)
- Streptomyces qinzhouensis (isolates:1; rSTs:1)
- Streptomyces radicis (isolates:2; rSTs:1)
- Streptomyces radiopugnans (isolates:1; rSTs:1)
- Streptomyces rapamycinicus (isolates:4; rSTs:1)
- Streptomyces recifensis (isolates:1; rSTs:1)
- Streptomyces rectiverticillatus (isolates:1; rSTs:1)
- Streptomyces regalis (isolates:1; rSTs:1)
- Streptomyces reniochalinae (isolates:1; rSTs:1)
- Streptomyces resistomycificus (isolates:3; rSTs:1)
- Streptomyces reticuli (isolates:1; rSTs:1)
- Streptomyces reticuliscabiei (isolates:1; rSTs:1)
- Streptomyces rhizoryzae (isolates:1; rSTs:1)
- Streptomyces rhizosphaericola (isolates:1; rSTs:1)
- Streptomyces rhizosphaericus (isolates:3; rSTs:1)
- Streptomyces rhizosphaerihabitans (isolates:1; rSTs:1)
- Streptomyces rishiriensis (isolates:1; rSTs:1)
- Streptomyces rochei (isolates:1; rSTs:1)
- Streptomyces roseicoloratus (isolates:2; rSTs:2)
- Streptomyces roseifaciens (isolates:1; rSTs:1)
- Streptomyces roseirectus (isolates:1; rSTs:1)
- Streptomyces roseochromogenus (isolates:1; rSTs:1)
- Streptomyces roseolilacinus (isolates:1; rSTs:1)
- Streptomyces roseolus (isolates:1; rSTs:1)
- Streptomyces roseoverticillatus (isolates:2; rSTs:2)
- Streptomyces roseoviolaceus (isolates:1; rSTs:1)
- Streptomyces roseus (isolates:1; rSTs:1)
- Streptomyces rubellomurinus (isolates:2; rSTs:2)
- Streptomyces rubiginosohelvolus (isolates:1; rSTs:1)
- Streptomyces rubiginosus (isolates:1; rSTs:1)
- Streptomyces rubradiris (isolates:2; rSTs:1)
- Streptomyces rubrogriseus (isolates:2; rSTs:1)
- Streptomyces rubrolavendulae (isolates:1; rSTs:1)
- Streptomyces rugosispiralis (isolates:1; rSTs:1)
- Streptomyces rutgersensis (isolates:1; rSTs:1)
- Streptomyces sabulosicollis (isolates:1; rSTs:1)
- Streptomyces salinarius (isolates:2; rSTs:2)
- Streptomyces sampsonii (isolates:1; rSTs:2)
- Streptomyces samsunensis (isolates:1; rSTs:1)
- Streptomyces sasae (isolates:1; rSTs:1)
- Streptomyces scabichelini (isolates:1; rSTs:1)
- Streptomyces scabiei (isolates:73; rSTs:15 tree)
- Streptomyces scopuliridis (isolates:5; rSTs:3)
- Streptomyces sedi (isolates:1; rSTs:1)
- Streptomyces sennicomposti (isolates:1; rSTs:1)
- Streptomyces seoulensis (isolates:2; rSTs:1)
- Streptomyces shenzhenensis (isolates:2; rSTs:2)
- Streptomyces showdoensis (isolates:1; rSTs:1)
- Streptomyces sichuanensis (isolates:1; rSTs:1)
- Streptomyces silaceus (isolates:1; rSTs:1)
- Streptomyces silvae (isolates:2; rSTs:2)
- Streptomyces silvensis (isolates:1; rSTs:1)
- Streptomyces silvisoli (isolates:1; rSTs:1)
- Streptomyces sindenensis (isolates:1; rSTs:1)
- Streptomyces sioyaensis (isolates:2; rSTs:2)
- Streptomyces smaragdinus (isolates:1; rSTs:1)
- Streptomyces smyrnaeus (isolates:1; rSTs:1)
- Streptomyces solaniscabiei (isolates:4; rSTs:1)
- Streptomyces solincola (isolates:1; rSTs:1)
- Streptomyces solisilvae (isolates:1; rSTs:1)
- Streptomyces somaliensis (isolates:2; rSTs:2)
- Streptomyces sp. (isolates:1954; rSTs:1622)
- Streptomyces sparsogenes (isolates:2; rSTs:1)
- Streptomyces specialis (isolates:1; rSTs:1)
- Streptomyces spectabilis (isolates:5; rSTs:2)
- Streptomyces speibonae (isolates:1; rSTs:1)
- Streptomyces spinosisporus (isolates:1; rSTs:1)
- Streptomyces spinosus (isolates:1; rSTs:1)
- Streptomyces spinoverrucosus (isolates:2; rSTs:1)
- Streptomyces spiralis (isolates:1; rSTs:1)
- Streptomyces spiramenti (isolates:1; rSTs:1)
- Streptomyces spiramyceticus (isolates:2; rSTs:1)
- Streptomyces spirodelae (isolates:1; rSTs:1)
- Streptomyces spongiae (isolates:1; rSTs:1)
- Streptomyces spongiicola (isolates:2; rSTs:2)
- Streptomyces sporangiiformans (isolates:2; rSTs:1)
- Streptomyces spororaveus (isolates:2; rSTs:2)
- Streptomyces stelliscabiei (isolates:17; rSTs:4)
- Streptomyces subrutilus (isolates:3; rSTs:2)
- Streptomyces sudanensis (isolates:4; rSTs:2)
- Streptomyces sulfonofaciens (isolates:1; rSTs:1)
- Streptomyces sulphureus (isolates:1; rSTs:1)
- Streptomyces sviceus (isolates:1; rSTs:1)
- Streptomyces swartbergensis (isolates:1; rSTs:1)
- Streptomyces syringium (isolates:1; rSTs:1)
- Streptomyces tagetis (isolates:1)
- Streptomyces tailanensis (isolates:1; rSTs:1)
- Streptomyces taklimakanensis (isolates:1; rSTs:1)
- Streptomyces tamarix (isolates:1; rSTs:1)
- Streptomyces tanashiensis (isolates:3; rSTs:3 tree)
- Streptomyces tardus (isolates:1; rSTs:1)
- Streptomyces tateyamensis (isolates:1; rSTs:1)
- Streptomyces tauricus (isolates:3; rSTs:3)
- Streptomyces telluris (isolates:2; rSTs:1)
- Streptomyces tendae (isolates:1; rSTs:1)
- Streptomyces termitum (isolates:1; rSTs:1)
- Streptomyces thermocarboxydus (isolates:2; rSTs:2)
- Streptomyces thermodiastaticus (isolates:2; rSTs:1)
- Streptomyces thermolilacinus (isolates:1; rSTs:1)
- Streptomyces thermotolerans (isolates:1)
- Streptomyces thermoviolaceus (isolates:4; rSTs:4 tree)
- Streptomyces thermovulgaris (isolates:1; rSTs:1)
- Streptomyces tibetensis (isolates:2; rSTs:1)
- Streptomyces tirandamycinicus (isolates:2; rSTs:2)
- Streptomyces torulosus (isolates:1; rSTs:1)
- Streptomyces toxytricini (isolates:1; rSTs:1)
- Streptomyces toyocaensis (isolates:1; rSTs:1)
- Streptomyces tricolor (isolates:2; rSTs:1)
- Streptomyces triculaminicus (isolates:1; rSTs:1)
- Streptomyces triticagri (isolates:1; rSTs:1)
- Streptomyces triticiradicis (isolates:1; rSTs:1)
- Streptomyces triticirhizae (isolates:1; rSTs:1)
- Streptomyces triticisoli (isolates:1; rSTs:1)
- Streptomyces tropicalis (isolates:1; rSTs:1)
- Streptomyces tsukubensis (isolates:2; rSTs:1)
- Streptomyces tubbatahanensis (isolates:1; rSTs:1)
- Streptomyces tubercidicus (isolates:4; rSTs:3)
- Streptomyces tuirus (isolates:1; rSTs:1)
- Streptomyces turgidiscabies (isolates:1; rSTs:1)
- Streptomyces typhae (isolates:1; rSTs:1)
- Streptomyces umbrinus (isolates:4; rSTs:3 tree)
- Streptomyces uncialis (isolates:3; rSTs:3)
- Streptomyces ureilyticus (isolates:1; rSTs:1)
- Streptomyces variabilis (isolates:1)
- Streptomyces varsoviensis (isolates:3; rSTs:1)
- Streptomyces venezuelae (isolates:11; rSTs:4 tree)
- Streptomyces verrucosisporus (isolates:1; rSTs:1)
- Streptomyces vietnamensis (isolates:1; rSTs:1)
- Streptomyces vilmorinianum (isolates:1; rSTs:1)
- Streptomyces vinaceus (isolates:2; rSTs:1)
- Streptomyces vinaceusdrappus (isolates:1; rSTs:1)
- Streptomyces violaceochromogenes (isolates:2; rSTs:1)
- Streptomyces violaceoruber (isolates:1; rSTs:1)
- Streptomyces violaceorubidus (isolates:1; rSTs:1)
- Streptomyces violaceus (isolates:1)
- Streptomyces violaceusniger (isolates:1; rSTs:1)
- Streptomyces violarus (isolates:2; rSTs:1)
- Streptomyces violascens (isolates:2; rSTs:1)
- Streptomyces violens (isolates:1; rSTs:1)
- Streptomyces virginiae (isolates:4; rSTs:2)
- Streptomyces viridifaciens (isolates:2; rSTs:1)
- Streptomyces viridiviolaceus (isolates:1; rSTs:1)
- Streptomyces viridochromogenes (isolates:1; rSTs:1)
- Streptomyces viridosporus (isolates:4; rSTs:3 tree)
- Streptomyces wadayamensis (isolates:1)
- Streptomyces wedmorensis (isolates:1; rSTs:1)
- Streptomyces werraensis (isolates:2; rSTs:2)
- Streptomyces wuyuanensis (isolates:1; rSTs:1)
- Streptomyces xanthii (isolates:1; rSTs:1)
- Streptomyces xanthochromogenes (isolates:3; rSTs:3)
- Streptomyces xantholiticus (isolates:1; rSTs:1)
- Streptomyces xanthophaeus (isolates:4; rSTs:3 tree)
- Streptomyces xiamenensis (isolates:1; rSTs:1)
- Streptomyces xiaopingdaonensis (isolates:1; rSTs:1)
- Streptomyces xinghaiensis (isolates:2; rSTs:3)
- Streptomyces xylophagus (isolates:1; rSTs:1)
- Streptomyces yangpuensis (isolates:2; rSTs:2)
- Streptomyces yatensis (isolates:1; rSTs:1)
- Streptomyces yerevanensis (isolates:1; rSTs:1)
- Streptomyces yokosukanensis (isolates:1; rSTs:1)
- Streptomyces yunnanensis (isolates:2; rSTs:2)
- Streptomyces zagrosensis (isolates:1; rSTs:1)
- Streptomyces zaomyceticus (isolates:3; rSTs:3)
- Streptomyces zhaozhouensis (isolates:1; rSTs:1)
- Streptomyces zhihengii (isolates:1; rSTs:1)
- Streptomyces zinciresistens (isolates:1; rSTs:1)
- Streptomyces zingiberis (isolates:1; rSTs:1)
- [Kitasatospora] papulosa (isolates:1; rSTs:1)
- Wenjunlia (isolates:3; rSTs:2)
- Yinghuangia (isolates:2; rSTs:2)
- Actinacidiphila (isolates:21; rSTs:17 tree)
- Micrococcales (isolates:4023; rSTs:3184)
- Beutenbergiaceae (isolates:8; rSTs:8 tree)
- Bogoriellaceae (isolates:26; rSTs:19 tree)
- Bogoriella (isolates:1; rSTs:1)
- Bogoriella caseilytica (isolates:1; rSTs:1)
- Georgenia (isolates:25; rSTs:18 tree)
- Georgenia faecalis (isolates:2; rSTs:2)
- Georgenia muralis (isolates:1; rSTs:1)
- Georgenia ruanii (isolates:1; rSTs:1)
- Georgenia satyanarayanai (isolates:2; rSTs:2)
- Georgenia soli (isolates:1; rSTs:1)
- Georgenia sp. (isolates:10; rSTs:5 tree)
- Georgenia subflava (isolates:2; rSTs:1)
- Georgenia thermotolerans (isolates:2; rSTs:1)
- Georgenia wutianyii (isolates:1; rSTs:1)
- Georgenia yuyongxinii (isolates:2; rSTs:2)
- Oceanitalea stevensii (isolates:1; rSTs:1)
- Bogoriella (isolates:1; rSTs:1)
- Brevibacteriaceae (isolates:154; rSTs:135 tree)
- Brevibacterium (isolates:149; rSTs:131 tree)
- Brevibacterium album (isolates:1; rSTs:1)
- Brevibacterium antiquum (isolates:2; rSTs:2)
- Brevibacterium atlanticum (isolates:1; rSTs:1)
- Brevibacterium aurantiacum (isolates:28; rSTs:25 tree)
- Brevibacterium casei (isolates:23; rSTs:13 tree)
- Brevibacterium celere (isolates:1; rSTs:1)
- Brevibacterium daeguense (isolates:1; rSTs:1)
- Brevibacterium epidermidis (isolates:2; rSTs:2)
- Brevibacterium gallinarum (isolates:1; rSTs:1)
- Brevibacterium ihuae (isolates:1; rSTs:1)
- Brevibacterium iodinum (isolates:2; rSTs:1)
- Brevibacterium jeotgali (isolates:2; rSTs:1)
- Brevibacterium limosum (isolates:1; rSTs:1)
- Brevibacterium linens (isolates:4; rSTs:3 tree)
- Brevibacterium luteolum (isolates:12; rSTs:8 tree)
- Brevibacterium marinum (isolates:1; rSTs:1)
- Brevibacterium mcbrellneri (isolates:1; rSTs:1)
- Brevibacterium oceani (isolates:2; rSTs:2)
- Brevibacterium paucivorans (isolates:2; rSTs:2)
- Brevibacterium permense (isolates:1; rSTs:1)
- Brevibacterium pigmentatum (isolates:1; rSTs:1)
- Brevibacterium ravenspurgense (isolates:6; rSTs:5 tree)
- Brevibacterium renqingii (isolates:2; rSTs:2)
- Brevibacterium rongguiense (isolates:1; rSTs:1)
- Brevibacterium sandarakinum (isolates:1; rSTs:1)
- Brevibacterium sediminis (isolates:4; rSTs:3 tree)
- Brevibacterium senegalense (isolates:2; rSTs:1)
- Brevibacterium siliguriense (isolates:1; rSTs:1)
- Brevibacterium sp. (isolates:38; rSTs:43 tree)
- Brevibacterium spongiae (isolates:1; rSTs:1)
- Brevibacterium yomogidense (isolates:1; rSTs:1)
- Brevibacterium zhoupengii (isolates:2; rSTs:2)
- Sediminivirga (isolates:3; rSTs:2)
- Sediminivirga luteola (isolates:3; rSTs:2)
- Spelaeicoccus (isolates:2; rSTs:2)
- Spelaeicoccus albus (isolates:2; rSTs:2)
- Brevibacterium (isolates:149; rSTs:131 tree)
- Cellulomonadaceae (isolates:159; rSTs:120 tree)
- Actinotalea (isolates:12; rSTs:8 tree)
- Cellulomonas (isolates:126; rSTs:94 tree)
- Cellulomonas aerilata (isolates:1; rSTs:1)
- Cellulomonas alba (isolates:1)
- Cellulomonas algicola (isolates:2; rSTs:2)
- Cellulomonas avistercoris (isolates:1; rSTs:1)
- Cellulomonas biazotea (isolates:1; rSTs:1)
- Cellulomonas bogoriensis (isolates:1; rSTs:1)
- Cellulomonas carbonis (isolates:2; rSTs:1)
- Cellulomonas cellasea (isolates:3; rSTs:2)
- Cellulomonas chengniuliangii (isolates:3; rSTs:2)
- Cellulomonas chitinilytica (isolates:2; rSTs:1)
- Cellulomonas citrea (isolates:1; rSTs:1)
- Cellulomonas composti (isolates:2; rSTs:1)
- Cellulomonas denverensis (isolates:3; rSTs:1)
- Cellulomonas dongxiuzhuiae (isolates:3; rSTs:2)
- Cellulomonas endometrii (isolates:1; rSTs:1)
- Cellulomonas endophytica (isolates:1; rSTs:1)
- Cellulomonas fengjieae (isolates:3; rSTs:2)
- Cellulomonas fimi (isolates:4; rSTs:2)
- Cellulomonas flavigena (isolates:2; rSTs:1)
- Cellulomonas fulva (isolates:1; rSTs:1)
- Cellulomonas gelida (isolates:2; rSTs:2)
- Cellulomonas gilvus (isolates:1; rSTs:1)
- Cellulomonas hominis (isolates:5; rSTs:3 tree)
- Cellulomonas humilata (isolates:1; rSTs:1)
- Cellulomonas iranensis (isolates:5; rSTs:3 tree)
- Cellulomonas marina (isolates:2; rSTs:1)
- Cellulomonas massiliensis (isolates:2; rSTs:1)
- Cellulomonas oligotrophica (isolates:2; rSTs:1)
- Cellulomonas pakistanensis (isolates:1; rSTs:1)
- Cellulomonas palmilytica (isolates:1; rSTs:1)
- Cellulomonas persica (isolates:2; rSTs:1)
- Cellulomonas phragmiteti (isolates:1; rSTs:1)
- Cellulomonas rhizosphaerae (isolates:1; rSTs:1)
- Cellulomonas septica (isolates:1; rSTs:1)
- Cellulomonas shaoxiangyii (isolates:2; rSTs:1)
- Cellulomonas soli (isolates:2; rSTs:1)
- Cellulomonas sp. (isolates:36; rSTs:35 tree)
- Cellulomonas taurus (isolates:1; rSTs:1)
- Cellulomonas telluris (isolates:1; rSTs:1)
- Cellulomonas terrae (isolates:2; rSTs:1)
- Cellulomonas timonensis (isolates:2; rSTs:1)
- Cellulomonas triticagri (isolates:1; rSTs:1)
- Cellulomonas uda (isolates:2; rSTs:1)
- Cellulomonas wangleii (isolates:3; rSTs:2)
- Cellulomonas wangsupingiae (isolates:3; rSTs:2)
- Cellulomonas xiejunii (isolates:3; rSTs:2)
- Cellulomonas xylanilytica (isolates:2; rSTs:1)
- Cellulomons edaphi (isolates:1)
- Oerskovia (isolates:15; rSTs:13 tree)
- Oerskovia douganii (isolates:1; rSTs:1)
- Oerskovia enterophila (isolates:2; rSTs:2)
- Oerskovia gallyi (isolates:1; rSTs:1)
- Oerskovia jenensis (isolates:1; rSTs:1)
- Oerskovia merdavium (isolates:1; rSTs:1)
- Oerskovia paurometabola (isolates:1; rSTs:1)
- Oerskovia rustica (isolates:1; rSTs:1)
- Oerskovia sp. (isolates:4; rSTs:4 tree)
- Oerskovia turbata (isolates:3; rSTs:1)
- Paraoerskovia (isolates:2; rSTs:2)
- Paraoerskovia marina (isolates:2; rSTs:2)
- Pseudactinotalea (isolates:2; rSTs:2)
- Sediminihabitans (isolates:2; rSTs:1)
- Sediminihabitans luteus (isolates:2; rSTs:1)
- Demequinaceae (isolates:46; rSTs:40 tree)
- Demequina (isolates:46; rSTs:40 tree)
- Demequina activiva (isolates:1; rSTs:1)
- Demequina aestuarii (isolates:1; rSTs:1)
- Demequina aurantiaca (isolates:1; rSTs:1)
- Demequina flava (isolates:1; rSTs:1)
- Demequina gelatinilytica (isolates:1; rSTs:1)
- Demequina globuliformis (isolates:1; rSTs:1)
- Demequina iriomotensis (isolates:1; rSTs:1)
- Demequina litorisediminis (isolates:1)
- Demequina lutea (isolates:2; rSTs:1)
- Demequina mangrovi (isolates:2; rSTs:1)
- Demequina maris (isolates:3; rSTs:3 tree)
- Demequina oxidasica (isolates:1; rSTs:1)
- Demequina pelophila (isolates:1; rSTs:1)
- Demequina phytophila (isolates:1; rSTs:1)
- Demequina rhizosphaerae (isolates:3; rSTs:3 tree)
- Demequina salsinemoris (isolates:1; rSTs:1)
- Demequina sediminicola (isolates:1; rSTs:1)
- Demequina sediminis (isolates:1; rSTs:1)
- Demequina silvatica (isolates:1; rSTs:1)
- Demequina soli (isolates:1; rSTs:1)
- Demequina sp. (isolates:19; rSTs:16 tree)
- Demequina subtropica (isolates:1; rSTs:1)
- Demequina (isolates:46; rSTs:40 tree)
- Dermabacteraceae (isolates:103; rSTs:88 tree)
- Brachybacterium (isolates:71; rSTs:64 tree)
- Brachybacterium alimentarium (isolates:8; rSTs:8 tree)
- Brachybacterium aquaticum (isolates:1; rSTs:1)
- Brachybacterium atlanticum (isolates:1; rSTs:1)
- Brachybacterium avium (isolates:1; rSTs:1)
- Brachybacterium endophyticum (isolates:1; rSTs:1)
- Brachybacterium epidermidis (isolates:1; rSTs:1)
- Brachybacterium equifaecis (isolates:1; rSTs:1)
- Brachybacterium faecium (isolates:1; rSTs:1)
- Brachybacterium fresconis (isolates:1; rSTs:1)
- Brachybacterium ginsengisoli (isolates:1; rSTs:1)
- Brachybacterium halotolerans (isolates:2; rSTs:2)
- Brachybacterium huguangmaarense (isolates:1; rSTs:1)
- Brachybacterium kimchii (isolates:1; rSTs:1)
- Brachybacterium massiliense (isolates:1; rSTs:1)
- Brachybacterium muris (isolates:9; rSTs:8 tree)
- Brachybacterium nesterenkovii (isolates:1; rSTs:1)
- Brachybacterium paraconglomeratum (isolates:9; rSTs:6 tree)
- Brachybacterium phenoliresistens (isolates:1; rSTs:1)
- Brachybacterium sacelli (isolates:1; rSTs:1)
- Brachybacterium saurashtrense (isolates:2; rSTs:1)
- Brachybacterium sillae (isolates:1; rSTs:1)
- Brachybacterium sp. (isolates:20; rSTs:18 tree)
- Brachybacterium squillarum (isolates:1; rSTs:1)
- Brachybacterium subflavum (isolates:1; rSTs:1)
- Brachybacterium timonense (isolates:1; rSTs:1)
- Brachybacterium tyrofermentans (isolates:1; rSTs:1)
- Brachybacterium vulturis (isolates:1; rSTs:1)
- Dermabacter (isolates:24; rSTs:18 tree)
- Devriesea (isolates:1; rSTs:1)
- Devriesea agamarum (isolates:1; rSTs:1)
- Helcobacillus (isolates:7; rSTs:5 tree)
- Brachybacterium (isolates:71; rSTs:64 tree)
- Dermacoccaceae (isolates:48; rSTs:43 tree)
- Allobranchiibius (isolates:4; rSTs:4 tree)
- Barrientosiimonas (isolates:2; rSTs:1)
- Barrientosiimonas humi (isolates:2; rSTs:1)
- Branchiibius (isolates:2; rSTs:2)
- Calidifontibacter (isolates:1; rSTs:1)
- Calidifontibacter indicus (isolates:1; rSTs:1)
- Demetria (isolates:1; rSTs:1)
- Demetria terragena (isolates:1; rSTs:1)
- Dermacoccus (isolates:22; rSTs:20 tree)
- Flexivirga (isolates:6; rSTs:5 tree)
- Leekyejoonella (isolates:1; rSTs:1)
- Leekyejoonella antrihumi (isolates:1; rSTs:1)
- Luteipulveratus (isolates:4; rSTs:3 tree)
- Metallococcus (isolates:1; rSTs:1)
- Metallococcus carri (isolates:1; rSTs:1)
- Rudaeicoccus (isolates:1; rSTs:1)
- Rudaeicoccus suwonensis (isolates:1; rSTs:1)
- Yimella (isolates:3; rSTs:3 tree)
- Dermatophilaceae (isolates:56; rSTs:17 tree)
- Agilicoccus (isolates:1; rSTs:1)
- Agilicoccus flavus (isolates:1; rSTs:1)
- Austwickia (isolates:4; rSTs:3 tree)
- Dermatophilus (isolates:44; rSTs:8 tree)
- Gephyromycinifex (isolates:1; rSTs:1)
- Gephyromycinifex aptenodytis (isolates:1; rSTs:1)
- Kineosphaera (isolates:2; rSTs:1)
- Kineosphaera limosa (isolates:2; rSTs:1)
- Mobilicoccus (isolates:3; rSTs:2)
- Piscicoccus (isolates:1; rSTs:1)
- Piscicoccus intestinalis (isolates:1; rSTs:1)
- Agilicoccus (isolates:1; rSTs:1)
- Intrasporangiaceae (isolates:115; rSTs:93 tree)
- Arsenicicoccus (isolates:7; rSTs:7 tree)
- Humibacillus (isolates:2; rSTs:2)
- Humibacillus xanthopallidus (isolates:2; rSTs:2)
- Intrasporangium (isolates:8; rSTs:6 tree)
- Janibacter (isolates:42; rSTs:28 tree)
- Janibacter alkaliphilus (isolates:1; rSTs:1)
- Janibacter anophelis (isolates:2; rSTs:2)
- Janibacter corallicola (isolates:1; rSTs:1)
- Janibacter cremeus (isolates:1; rSTs:1)
- Janibacter endophyticus (isolates:1; rSTs:1)
- Janibacter hoylei (isolates:6; rSTs:3 tree)
- Janibacter indicus (isolates:3; rSTs:3 tree)
- Janibacter limosus (isolates:3; rSTs:2)
- Janibacter massiliensis (isolates:1; rSTs:1)
- Janibacter melonis (isolates:17; rSTs:7 tree)
- Janibacter sp. (isolates:4; rSTs:4 tree)
- Janibacter terrae (isolates:2; rSTs:2)
- Knoellia (isolates:8; rSTs:7 tree)
- Kribbia (isolates:1; rSTs:1)
- Kribbia dieselivorans (isolates:1; rSTs:1)
- Lapillicoccus (isolates:1; rSTs:1)
- Lapillicoccus jejuensis (isolates:1; rSTs:1)
- Marihabitans (isolates:1; rSTs:1)
- Marihabitans asiaticum (isolates:1; rSTs:1)
- Ornithinibacter (isolates:1; rSTs:1)
- Ornithinibacter aureus (isolates:1; rSTs:1)
- Ornithinicoccus (isolates:3; rSTs:2)
- Oryzihumus (isolates:1; rSTs:1)
- Oryzihumus leptocrescens (isolates:1; rSTs:1)
- Pedococcus (isolates:5; rSTs:5 tree)
- Phycicoccus (isolates:14; rSTs:12 tree)
- Phycicoccus avicenniae (isolates:1; rSTs:1)
- Phycicoccus duodecadis (isolates:1; rSTs:1)
- Phycicoccus elongatus (isolates:1; rSTs:1)
- Phycicoccus endophyticus (isolates:3; rSTs:1)
- Phycicoccus flavus (isolates:1; rSTs:1)
- Phycicoccus jejuensis (isolates:1; rSTs:1)
- Phycicoccus mangrovi (isolates:2; rSTs:2)
- Phycicoccus sonneraticus (isolates:1)
- Phycicoccus sp. (isolates:3; rSTs:4 tree)
- Segeticoccus (isolates:1; rSTs:1)
- Segeticoccus rhizosphaerae (isolates:1; rSTs:1)
- Terrabacter (isolates:14; rSTs:14 tree)
- Terracoccus (isolates:3; rSTs:2)
- Terracoccus luteus (isolates:3; rSTs:2)
- Tetrasphaera (isolates:3; rSTs:2)
- Jonesiaceae (isolates:9; rSTs:5 tree)
- Kytococcaceae (isolates:9; rSTs:6 tree)
- Microbacteriaceae (isolates:1881; rSTs:1496)
- Agreia (isolates:11; rSTs:11 tree)
- Agrococcus (isolates:20; rSTs:21 tree)
- Agrococcus carbonis (isolates:1; rSTs:1)
- Agrococcus casei (isolates:1; rSTs:1)
- Agrococcus jejuensis (isolates:2; rSTs:2)
- Agrococcus jenensis (isolates:1; rSTs:1)
- Agrococcus lahaulensis (isolates:1; rSTs:1)
- Agrococcus pavilionensis (isolates:1; rSTs:1)
- Agrococcus sediminis (isolates:1; rSTs:1)
- Agrococcus sp. (isolates:11; rSTs:12 tree)
- Agrococcus terreus (isolates:1; rSTs:1)
- Agromyces (isolates:79; rSTs:68 tree)
- Agromyces agglutinans (isolates:1; rSTs:1)
- Agromyces albus (isolates:2; rSTs:2)
- Agromyces allii (isolates:1; rSTs:1)
- Agromyces archimandritae (isolates:1; rSTs:1)
- Agromyces atrinae (isolates:3; rSTs:2)
- Agromyces aurantiacus (isolates:1; rSTs:1)
- Agromyces aureus (isolates:2; rSTs:1)
- Agromyces badenianii (isolates:2; rSTs:2)
- Agromyces bauzanensis (isolates:1; rSTs:1)
- Agromyces binzhouensis (isolates:1; rSTs:1)
- Agromyces bracchium (isolates:1; rSTs:1)
- Agromyces cavernae (isolates:1; rSTs:1)
- Agromyces cerinus (isolates:1; rSTs:1)
- Agromyces chromiiresistens (isolates:1; rSTs:1)
- Agromyces flavus (isolates:3; rSTs:1)
- Agromyces fucosus (isolates:1; rSTs:1)
- Agromyces hippuratus (isolates:1; rSTs:1)
- Agromyces humatus (isolates:1; rSTs:1)
- Agromyces humi (isolates:1; rSTs:1)
- Agromyces indicus (isolates:1; rSTs:1)
- Agromyces intestinalis (isolates:1; rSTs:1)
- Agromyces italicus (isolates:2; rSTs:2)
- Agromyces kandeliae (isolates:1; rSTs:1)
- Agromyces laixinhei (isolates:3; rSTs:3 tree)
- Agromyces lapidis (isolates:1; rSTs:1)
- Agromyces larvae (isolates:1; rSTs:1)
- Agromyces luteolus (isolates:2; rSTs:1)
- Agromyces mangrovi (isolates:1; rSTs:1)
- Agromyces mariniharenae (isolates:1; rSTs:1)
- Agromyces marinus (isolates:2; rSTs:1)
- Agromyces mediolanus (isolates:5; rSTs:3 tree)
- Agromyces protaetiae (isolates:1; rSTs:1)
- Agromyces ramosus (isolates:1; rSTs:1)
- Agromyces rhizosphaerae (isolates:1; rSTs:1)
- Agromyces salentinus (isolates:1; rSTs:1)
- Agromyces seonyuensis (isolates:1; rSTs:1)
- Agromyces sp. (isolates:23; rSTs:21 tree)
- Agromyces subbeticus (isolates:1; rSTs:1)
- Agromyces tardus (isolates:1; rSTs:1)
- Agromyces terreus (isolates:2; rSTs:1)
- Alpinimonas (isolates:1; rSTs:1)
- Alpinimonas psychrophila (isolates:1; rSTs:1)
- Amnibacterium (isolates:4; rSTs:4 tree)
- Antiquaquibacter (isolates:1; rSTs:1)
- Antiquaquibacter oligotrophicus (isolates:1; rSTs:1)
- Aquiluna (isolates:3; rSTs:3 tree)
- Arenivirga (isolates:1)
- Arenivirga flava (isolates:1)
- Aurantimicrobium (isolates:5; rSTs:5 tree)
- Candidatus Lumbricidophila (isolates:1; rSTs:1)
- Candidatus Lumbricidophila eiseniae (isolates:1; rSTs:1)
- Canibacter (isolates:5; rSTs:5 tree)
- Clavibacter (isolates:183; rSTs:102 tree)
- Clavibacter californiensis (isolates:2; rSTs:1)
- Clavibacter capsici (isolates:5; rSTs:5 tree)
- Clavibacter lycopersici (isolates:2; rSTs:1)
- Clavibacter michiganensis (isolates:142; rSTs:70 tree)
- Clavibacter nebraskensis (isolates:12; rSTs:5 tree)
- Clavibacter phaseoli (isolates:6; rSTs:4 tree)
- Clavibacter sepedonicus (isolates:4; rSTs:1)
- Clavibacter sp. (isolates:8; rSTs:14 tree)
- Clavibacter zhangzhiyongii (isolates:2; rSTs:1)
- Cnuibacter (isolates:3; rSTs:2)
- Cnuibacter physcomitrellae (isolates:3; rSTs:2)
- Compostimonas (isolates:1; rSTs:1)
- Compostimonas suwonensis (isolates:1; rSTs:1)
- Conyzicola (isolates:2; rSTs:2)
- Cryobacterium (isolates:129; rSTs:109 tree)
- Cryobacterium adonitolivorans (isolates:1; rSTs:1)
- Cryobacterium algoricola (isolates:1; rSTs:1)
- Cryobacterium algoritolerans (isolates:1; rSTs:1)
- Cryobacterium arcticum (isolates:1; rSTs:1)
- Cryobacterium aureum (isolates:1; rSTs:1)
- Cryobacterium breve (isolates:1; rSTs:1)
- Cryobacterium cheniae (isolates:1; rSTs:1)
- Cryobacterium cryoconiti (isolates:1; rSTs:1)
- Cryobacterium flavum (isolates:2; rSTs:1)
- Cryobacterium frigoriphilum (isolates:1; rSTs:1)
- Cryobacterium fucosi (isolates:1; rSTs:1)
- Cryobacterium gelidum (isolates:1; rSTs:1)
- Cryobacterium glaciale (isolates:1; rSTs:1)
- Cryobacterium glucosi (isolates:1; rSTs:1)
- Cryobacterium lactosi (isolates:1; rSTs:1)
- Cryobacterium levicorallinum (isolates:3; rSTs:1)
- Cryobacterium luteum (isolates:2; rSTs:1)
- Cryobacterium lyxosi (isolates:1; rSTs:1)
- Cryobacterium mannosilyticum (isolates:1; rSTs:1)
- Cryobacterium melibiosiphilum (isolates:1; rSTs:1)
- Cryobacterium psychrophilum (isolates:2; rSTs:1)
- Cryobacterium psychrotolerans (isolates:2; rSTs:1)
- Cryobacterium roopkundense (isolates:2; rSTs:1)
- Cryobacterium ruanii (isolates:1; rSTs:1)
- Cryobacterium sandaracinum (isolates:1; rSTs:1)
- Cryobacterium serini (isolates:1; rSTs:1)
- Cryobacterium shii (isolates:1; rSTs:1)
- Cryobacterium sinapicolor (isolates:1; rSTs:1)
- Cryobacterium soli (isolates:1; rSTs:1)
- Cryobacterium sp. (isolates:86; rSTs:73 tree)
- Cryobacterium suzukii (isolates:1; rSTs:1)
- Cryobacterium tagatosivorans (isolates:1; rSTs:1)
- Cryobacterium tepidiphilum (isolates:1; rSTs:1)
- Cryobacterium zhongshanensis (isolates:1; rSTs:1)
- Cryobacterium zongtaii (isolates:3; rSTs:3 tree)
- Curtobacterium (isolates:246; rSTs:224 tree)
- Curtobacterium albidum (isolates:1; rSTs:1)
- Curtobacterium allii (isolates:1; rSTs:1)
- Curtobacterium ammoniigenes (isolates:1; rSTs:1)
- Curtobacterium caseinilyticum (isolates:1; rSTs:1)
- Curtobacterium citreum (isolates:3; rSTs:2)
- Curtobacterium citri (isolates:1; rSTs:1)
- Curtobacterium flaccumfaciens (isolates:55; rSTs:46 tree)
- Curtobacterium herbarum (isolates:4; rSTs:3 tree)
- Curtobacterium luteum (isolates:4; rSTs:5 tree)
- Curtobacterium oceanosedimentum (isolates:2; rSTs:1)
- Curtobacterium pusillum (isolates:6; rSTs:5 tree)
- Curtobacterium sp. (isolates:166; rSTs:156 tree)
- Curtobacterium subtropicum (isolates:1; rSTs:1)
- Diaminobutyricibacter (isolates:1; rSTs:1)
- Diaminobutyricibacter tongyongensis (isolates:1; rSTs:1)
- Diaminobutyricimonas (isolates:1; rSTs:1)
- Diaminobutyricimonas aerilata (isolates:1; rSTs:1)
- Frigoribacterium (isolates:43; rSTs:34 tree)
- Frondihabitans (isolates:9; rSTs:6 tree)
- Galbitalea (isolates:2; rSTs:1)
- Galbitalea soli (isolates:2; rSTs:1)
- Glaciibacter (isolates:2; rSTs:2)
- Glaciihabitans (isolates:2; rSTs:2)
- Gryllotalpicola (isolates:2; rSTs:2)
- Gulosibacter (isolates:17; rSTs:14 tree)
- Gulosibacter bifidus (isolates:1; rSTs:1)
- Gulosibacter chungangensis (isolates:1; rSTs:1)
- Gulosibacter faecalis (isolates:1; rSTs:1)
- Gulosibacter hominis (isolates:3; rSTs:3 tree)
- Gulosibacter macacae (isolates:1; rSTs:1)
- Gulosibacter massiliensis (isolates:1; rSTs:1)
- Gulosibacter molinativorax (isolates:3; rSTs:1)
- Gulosibacter sediminis (isolates:4; rSTs:4 tree)
- Gulosibacter sp. (isolates:2; rSTs:1)
- Herbiconiux (isolates:14; rSTs:11 tree)
- Herbiconiux aconitum (isolates:1; rSTs:1)
- Herbiconiux daphne (isolates:1; rSTs:1)
- Herbiconiux flava (isolates:2; rSTs:1)
- Herbiconiux gentiana (isolates:2; rSTs:1)
- Herbiconiux ginsengi (isolates:1; rSTs:1)
- Herbiconiux moechotypicola (isolates:1; rSTs:1)
- Herbiconiux oxytropis (isolates:2; rSTs:1)
- Herbiconiux solani (isolates:1; rSTs:1)
- Herbiconiux sp. (isolates:3; rSTs:3 tree)
- Homoserinibacter (isolates:1; rSTs:1)
- Homoserinibacter sp. (isolates:1; rSTs:1)
- Homoserinimonas (isolates:1; rSTs:1)
- Homoserinimonas aerilata (isolates:1; rSTs:1)
- Humibacter (isolates:3; rSTs:3 tree)
- Klugiella (isolates:1; rSTs:1)
- Klugiella xanthotipulae (isolates:1; rSTs:1)
- Labedella (isolates:4; rSTs:4 tree)
- Lacisediminihabitans (isolates:2; rSTs:2)
- Leifsonia (isolates:42; rSTs:39 tree)
- Leifsonia aquatica (isolates:2; rSTs:1)
- Leifsonia flava (isolates:1; rSTs:1)
- Leifsonia naganoensis (isolates:1; rSTs:1)
- Leifsonia poae (isolates:1; rSTs:1)
- Leifsonia psychrotolerans (isolates:1; rSTs:1)
- Leifsonia shinshuensis (isolates:3; rSTs:3 tree)
- Leifsonia soli (isolates:1; rSTs:1)
- Leifsonia sp. (isolates:25; rSTs:25 tree)
- Leifsonia virtsii (isolates:1; rSTs:1)
- Leifsonia williamsii (isolates:2; rSTs:1)
- Leifsonia xyli (isolates:4; rSTs:3 tree)
- Leucobacter (isolates:83; rSTs:59 tree)
- Leucobacter allii (isolates:2; rSTs:2)
- Leucobacter aridicollis (isolates:4; rSTs:3 tree)
- Leucobacter celer (isolates:1; rSTs:1)
- Leucobacter chinensis (isolates:1; rSTs:1)
- Leucobacter chironomi (isolates:1; rSTs:1)
- Leucobacter chromiireducens (isolates:3; rSTs:3 tree)
- Leucobacter chromiiresistens (isolates:3; rSTs:1)
- Leucobacter chromiisoli (isolates:1; rSTs:1)
- Leucobacter coleopterorum (isolates:1; rSTs:1)
- Leucobacter denitrificans (isolates:1; rSTs:1)
- Leucobacter edaphi (isolates:1; rSTs:1)
- Leucobacter exalbidus (isolates:1; rSTs:1)
- Leucobacter insecticola (isolates:1; rSTs:1)
- Leucobacter japonicus (isolates:1; rSTs:1)
- Leucobacter komagatae (isolates:1; rSTs:1)
- Leucobacter luti (isolates:6; rSTs:4 tree)
- Leucobacter manosquensis (isolates:1; rSTs:1)
- Leucobacter massiliensis (isolates:1; rSTs:1)
- Leucobacter muris (isolates:1; rSTs:1)
- Leucobacter musarum (isolates:1; rSTs:1)
- Leucobacter rhizosphaerae (isolates:1; rSTs:1)
- Leucobacter ruminantium (isolates:1; rSTs:1)
- Leucobacter salsicius (isolates:1; rSTs:1)
- Leucobacter soli (isolates:1; rSTs:1)
- Leucobacter sp. (isolates:40; rSTs:21 tree)
- Leucobacter tardus (isolates:1; rSTs:1)
- Leucobacter tenebrionis (isolates:1; rSTs:1)
- Leucobacter triazinivorans (isolates:1; rSTs:1)
- Leucobacter viscericola (isolates:1; rSTs:1)
- Leucobacter weissii (isolates:1; rSTs:1)
- Leucobacter zeae (isolates:1; rSTs:1)
- Lysinibacter (isolates:1; rSTs:1)
- Lysinibacter cavernae (isolates:1; rSTs:1)
- Marisediminicola (isolates:2; rSTs:2)
- Microbacterium (isolates:603; rSTs:493 tree)
- Microbacterium aerolatum (isolates:3; rSTs:2)
- Microbacterium agarici (isolates:2; rSTs:2)
- Microbacterium album (isolates:1; rSTs:1)
- Microbacterium algeriense (isolates:17; rSTs:3 tree)
- Microbacterium allomyrinae (isolates:1; rSTs:1)
- Microbacterium amylolyticum (isolates:2; rSTs:1)
- Microbacterium aoyamense (isolates:1; rSTs:1)
- Microbacterium aquilitoris (isolates:2)
- Microbacterium aquimaris (isolates:2; rSTs:2)
- Microbacterium arabinogalactanolyticum (isolates:1; rSTs:1)
- Microbacterium arborescens (isolates:2; rSTs:2)
- Microbacterium arthrosphaerae (isolates:1; rSTs:1)
- Microbacterium atlanticum (isolates:1; rSTs:1)
- Microbacterium aurantiacum (isolates:2; rSTs:2)
- Microbacterium aurugineum (isolates:3; rSTs:3 tree)
- Microbacterium aurum (isolates:3; rSTs:2)
- Microbacterium azadirachtae (isolates:7; rSTs:5 tree)
- Microbacterium barkeri (isolates:1; rSTs:1)
- Microbacterium binotii (isolates:1; rSTs:1)
- Microbacterium bovistercoris (isolates:1; rSTs:1)
- Microbacterium caowuchunii (isolates:2; rSTs:1)
- Microbacterium chengjingii (isolates:2; rSTs:2)
- Microbacterium chocolatum (isolates:2; rSTs:2)
- Microbacterium commune (isolates:1; rSTs:1)
- Microbacterium cremeum (isolates:1; rSTs:1)
- Microbacterium croceum (isolates:1; rSTs:1)
- Microbacterium dauci (isolates:1)
- Microbacterium dextranolyticum (isolates:2; rSTs:1)
- Microbacterium elymi (isolates:1)
- Microbacterium enclense (isolates:3; rSTs:2)
- Microbacterium endophyticum (isolates:3; rSTs:1)
- Microbacterium esteraromaticum (isolates:2; rSTs:2)
- Microbacterium excoecariae (isolates:1; rSTs:1)
- Microbacterium faecale (isolates:1; rSTs:1)
- Microbacterium fandaimingii (isolates:2; rSTs:2)
- Microbacterium festucae (isolates:1; rSTs:1)
- Microbacterium flavescens (isolates:1; rSTs:1)
- Microbacterium flavum (isolates:2; rSTs:2)
- Microbacterium fluvii (isolates:1; rSTs:1)
- Microbacterium foliorum (isolates:5; rSTs:3 tree)
- Microbacterium galbinum (isolates:3; rSTs:3 tree)
- Microbacterium gallinarum (isolates:1; rSTs:1)
- Microbacterium ginsengisoli (isolates:1; rSTs:1)
- Microbacterium ginsengiterrae (isolates:2; rSTs:1)
- Microbacterium gorillae (isolates:1; rSTs:1)
- Microbacterium gubbeenense (isolates:1; rSTs:1)
- Microbacterium gwkjiense (isolates:1)
- Microbacterium halimionae (isolates:2; rSTs:1)
- Microbacterium halophytorum (isolates:2; rSTs:1)
- Microbacterium halotolerans (isolates:1; rSTs:1)
- Microbacterium hatanonis (isolates:1; rSTs:1)
- Microbacterium helvum (isolates:1; rSTs:1)
- Microbacterium hibisci (isolates:1; rSTs:1)
- Microbacterium hominis (isolates:6; rSTs:4 tree)
- Microbacterium humi (isolates:1; rSTs:1)
- Microbacterium hydrocarbonoxydans (isolates:2; rSTs:1)
- Microbacterium hydrothermale (isolates:2; rSTs:2)
- Microbacterium ihumii (isolates:1; rSTs:1)
- Microbacterium immunditiarum (isolates:1; rSTs:1)
- Microbacterium imperiale (isolates:3; rSTs:1)
- Microbacterium indicum (isolates:1; rSTs:1)
- Microbacterium insulae (isolates:1; rSTs:1)
- Microbacterium invictum (isolates:2; rSTs:1)
- Microbacterium jejuense (isolates:1; rSTs:1)
- Microbacterium keratanolyticum (isolates:2; rSTs:1)
- Microbacterium kunmingense (isolates:1; rSTs:1)
- Microbacterium kyungheense (isolates:1; rSTs:1)
- Microbacterium lacticum (isolates:5; rSTs:2)
- Microbacterium lacus (isolates:1; rSTs:1)
- Microbacterium laevaniformans (isolates:5; rSTs:4 tree)
- Microbacterium lemovicicum (isolates:1; rSTs:1)
- Microbacterium liquefaciens (isolates:9; rSTs:7 tree)
- Microbacterium lushaniae (isolates:2; rSTs:1)
- Microbacterium luteolum (isolates:1; rSTs:1)
- Microbacterium luteum (isolates:1; rSTs:1)
- Microbacterium luticocti (isolates:1; rSTs:1)
- Microbacterium mangrovi (isolates:1; rSTs:1)
- Microbacterium marinilacus (isolates:1; rSTs:1)
- Microbacterium marinum (isolates:1; rSTs:1)
- Microbacterium memoriense (isolates:1; rSTs:1)
- Microbacterium mitrae (isolates:1; rSTs:1)
- Microbacterium murale (isolates:1; rSTs:1)
- Microbacterium nanhaiense (isolates:1; rSTs:1)
- Microbacterium natoriense (isolates:1; rSTs:1)
- Microbacterium neungamense (isolates:1; rSTs:1)
- Microbacterium nymphoidis (isolates:1; rSTs:1)
- Microbacterium oleivorans (isolates:8; rSTs:8 tree)
- Microbacterium oryzae (isolates:2; rSTs:2)
- Microbacterium oxydans (isolates:8; rSTs:4 tree)
- Microbacterium paludicola (isolates:2; rSTs:2)
- Microbacterium paraoxydans (isolates:14; rSTs:11 tree)
- Microbacterium paulum (isolates:1; rSTs:1)
- Microbacterium phyllosphaerae (isolates:3; rSTs:2)
- Microbacterium plantarum (isolates:2; rSTs:2)
- Microbacterium profundi (isolates:2; rSTs:2)
- Microbacterium protaetiae (isolates:1; rSTs:1)
- Microbacterium proteolyticum (isolates:2; rSTs:2)
- Microbacterium pseudoresistens (isolates:1; rSTs:1)
- Microbacterium psychrotolerans (isolates:1)
- Microbacterium pullorum (isolates:1; rSTs:1)
- Microbacterium pumilum (isolates:1; rSTs:1)
- Microbacterium pygmaeum (isolates:1; rSTs:1)
- Microbacterium radiodurans (isolates:1; rSTs:1)
- Microbacterium resistens (isolates:3; rSTs:3 tree)
- Microbacterium rhizomatis (isolates:1; rSTs:1)
- Microbacterium rhizosphaerae (isolates:1; rSTs:1)
- Microbacterium saccharophilum (isolates:4; rSTs:2)
- Microbacterium saperdae (isolates:2; rSTs:1)
- Microbacterium schleiferi (isolates:3; rSTs:2)
- Microbacterium sediminis (isolates:3; rSTs:2)
- Microbacterium sorbitolivorans (isolates:2; rSTs:1)
- Microbacterium sp. (isolates:331; rSTs:290 tree)
- Microbacterium stercoris (isolates:1; rSTs:1)
- Microbacterium suaedae (isolates:2; rSTs:1)
- Microbacterium sufflavum (isolates:2; rSTs:2)
- Microbacterium sulfonylureivorans (isolates:1; rSTs:1)
- Microbacterium suwonense (isolates:1; rSTs:1)
- Microbacterium telephonicum (isolates:1; rSTs:1)
- Microbacterium tenebrionis (isolates:1; rSTs:1)
- Microbacterium terrae (isolates:2; rSTs:1)
- Microbacterium terricola (isolates:2; rSTs:1)
- Microbacterium testaceum (isolates:5; rSTs:5 tree)
- Microbacterium thalassium (isolates:2; rSTs:1)
- Microbacterium thalli (isolates:3; rSTs:3 tree)
- Microbacterium timonense (isolates:1; rSTs:1)
- Microbacterium trichothecenolyticum (isolates:3; rSTs:3 tree)
- Microbacterium ulmi (isolates:2; rSTs:1)
- Microbacterium ureisolvens (isolates:1; rSTs:1)
- Microbacterium wangchenii (isolates:2; rSTs:2)
- Microbacterium yannicii (isolates:2; rSTs:1)
- Microcella (isolates:18; rSTs:16 tree)
- Chryseoglobus sp. 28M-23 (isolates:1; rSTs:1)
- Microcella alkalica (isolates:2; rSTs:2)
- Microcella alkaliphila (isolates:2; rSTs:2)
- Microcella daejeonensis (isolates:2; rSTs:2)
- Microcella flavibacter (isolates:1; rSTs:1)
- Microcella frigidaquae (isolates:2; rSTs:1)
- Microcella humidisoli (isolates:1; rSTs:1)
- Microcella indica (isolates:1; rSTs:1)
- Microcella pacifica (isolates:1; rSTs:1)
- Microcella putealis (isolates:2; rSTs:1)
- Microcella sp. (isolates:1; rSTs:1)
- Yonghaparkia sp. Root332 (isolates:1; rSTs:1)
- Yonghaparkia sp. Soil809 (isolates:1; rSTs:1)
- Microterricola (isolates:4; rSTs:5 tree)
- Mycetocola (isolates:17; rSTs:13 tree)
- Mycetocola lacteus (isolates:1; rSTs:1)
- Mycetocola manganoxydans (isolates:2; rSTs:1)
- Mycetocola miduiensis (isolates:1; rSTs:1)
- Mycetocola reblochoni (isolates:2; rSTs:2)
- Mycetocola saprophilus (isolates:2; rSTs:1)
- Mycetocola sp. (isolates:3; rSTs:3 tree)
- Mycetocola spongiae (isolates:1; rSTs:1)
- Mycetocola tolaasinivorans (isolates:1)
- Mycetocola zhadangensis (isolates:2; rSTs:1)
- Mycetocola zhujimingii (isolates:2; rSTs:2)
- Naasia (isolates:4; rSTs:3 tree)
- Okibacterium (isolates:1; rSTs:1)
- Okibacterium fritillariae (isolates:1; rSTs:1)
- Planctomonas (isolates:1; rSTs:1)
- Planctomonas psychrotolerans (isolates:1; rSTs:1)
- Plantibacter (isolates:26; rSTs:22 tree)
- Pontimonas (isolates:1; rSTs:1)
- Pontimonas salivibrio (isolates:1; rSTs:1)
- Protaetiibacter (isolates:5; rSTs:5 tree)
- Pseudoclavibacter (isolates:37; rSTs:31 tree)
- Pseudoclavibacter alba (isolates:3; rSTs:3 tree)
- Pseudoclavibacter caeni (isolates:2; rSTs:1)
- Pseudoclavibacter chungangensis (isolates:2; rSTs:1)
- Pseudoclavibacter endophyticus (isolates:2; rSTs:2)
- Pseudoclavibacter helvolus (isolates:3; rSTs:2 tree)
- Pseudoclavibacter soli (isolates:1; rSTs:1)
- Pseudoclavibacter sp. (isolates:21; rSTs:18 tree)
- Pseudoclavibacter terrae (isolates:2; rSTs:2)
- Pseudoclavibacter triregionum (isolates:1; rSTs:1)
- Pseudolysinimonas (isolates:1; rSTs:1)
- Pseudolysinimonas yzui (isolates:1; rSTs:1)
- Rathayibacter (isolates:178; rSTs:113 tree)
- Rathayibacter agropyri (isolates:1; rSTs:1)
- Rathayibacter caricis (isolates:2; rSTs:2)
- Rathayibacter festucae (isolates:4; rSTs:4 tree)
- Rathayibacter iranicus (isolates:6; rSTs:2)
- Rathayibacter oskolensis (isolates:1; rSTs:1)
- Rathayibacter rathayi (isolates:27; rSTs:16 tree)
- Rathayibacter rubneri (isolates:1; rSTs:1)
- Rathayibacter sp. (isolates:87; rSTs:73 tree)
- Rathayibacter tanaceti (isolates:3; rSTs:2)
- Rathayibacter toxicus (isolates:40; rSTs:8 tree)
- Rathayibacter tritici (isolates:6; rSTs:3 tree)
- Rhodoglobus (isolates:1; rSTs:1)
- Rhodoglobus vestalii (isolates:1; rSTs:1)
- Rhodoluna (isolates:7; rSTs:7 tree)
- Salinibacterium (isolates:27; rSTs:20 tree)
- Schumannella (isolates:3; rSTs:3 tree)
- Subtercola (isolates:16; rSTs:12 tree)
- Terrimesophilobacter (isolates:3; rSTs:1)
- Terrimesophilobacter mesophilus (isolates:3; rSTs:1)
- Micrococcaceae (isolates:1232; rSTs:956 tree)
- Acaricomes (isolates:2; rSTs:1)
- Acaricomes phytoseiuli (isolates:2; rSTs:1)
- Arthrobacter (isolates:264; rSTs:228 tree)
- Arthrobacter agilis (isolates:5; rSTs:3 tree)
- Arthrobacter alkaliphilus (isolates:1; rSTs:1)
- Arthrobacter alpinus (isolates:4; rSTs:4 tree)
- Arthrobacter antioxidans (isolates:1; rSTs:1)
- Arthrobacter bambusae (isolates:3; rSTs:2)
- Arthrobacter burdickii (isolates:1; rSTs:1)
- Arthrobacter bussei (isolates:1; rSTs:1)
- Arthrobacter caoxuetaonis (isolates:3; rSTs:2)
- Arthrobacter castelli (isolates:1; rSTs:1)
- Arthrobacter cavernae (isolates:1; rSTs:1)
- Arthrobacter celericrescens (isolates:1; rSTs:1)
- Arthrobacter cheniae (isolates:1; rSTs:1)
- Arthrobacter citreus (isolates:2; rSTs:1)
- Arthrobacter crusticola (isolates:1; rSTs:1)
- Arthrobacter cryoconiti (isolates:1; rSTs:1)
- Arthrobacter crystallopoietes (isolates:5; rSTs:4 tree)
- Arthrobacter cupressi (isolates:2; rSTs:1)
- Arthrobacter dokdonellae (isolates:1; rSTs:1)
- Arthrobacter echini (isolates:1; rSTs:1)
- Arthrobacter gallicola (isolates:1; rSTs:1)
- Arthrobacter gandavensis (isolates:1; rSTs:1)
- Arthrobacter gengyunqii (isolates:3; rSTs:2)
- Arthrobacter glacialis (isolates:2; rSTs:2)
- Arthrobacter globiformis (isolates:3; rSTs:2)
- Arthrobacter hankyongi (isolates:1; rSTs:1)
- Arthrobacter humicola (isolates:1; rSTs:2)
- Arthrobacter ipis (isolates:1; rSTs:1)
- Arthrobacter jiangjiafuii (isolates:3; rSTs:2)
- Arthrobacter jinronghuae (isolates:3; rSTs:2)
- Arthrobacter koreensis (isolates:4; rSTs:4 tree)
- Arthrobacter liuii (isolates:1; rSTs:1)
- Arthrobacter livingstonensis (isolates:1; rSTs:1)
- Arthrobacter luteolus (isolates:2; rSTs:1)
- Arthrobacter mangrovi (isolates:1)
- Arthrobacter mobilis (isolates:1; rSTs:1)
- Arthrobacter nitrophenolicus (isolates:2; rSTs:1)
- Arthrobacter oryzae (isolates:1; rSTs:1)
- Arthrobacter pascens (isolates:2; rSTs:2)
- Arthrobacter pigmenti (isolates:1; rSTs:1)
- Arthrobacter pityocampae (isolates:1; rSTs:1)
- Arthrobacter psychrochitiniphilus (isolates:2; rSTs:1)
- Arthrobacter psychrolactophilus (isolates:1; rSTs:1)
- Arthrobacter pullicola (isolates:1; rSTs:1)
- Arthrobacter ramosus (isolates:1; rSTs:1)
- Arthrobacter rhizosphaerae (isolates:1; rSTs:1)
- Arthrobacter rhombi (isolates:1; rSTs:1)
- Arthrobacter roseus (isolates:1; rSTs:1)
- Arthrobacter ruber (isolates:1; rSTs:1)
- Arthrobacter silvisoli (isolates:1; rSTs:1)
- Arthrobacter silviterrae (isolates:2; rSTs:1)
- Arthrobacter sp. (isolates:153; rSTs:137 tree)
- Arthrobacter stackebrandtii (isolates:1; rSTs:1)
- Arthrobacter subterraneus (isolates:1; rSTs:1)
- Arthrobacter sulfonylureivorans (isolates:2; rSTs:2)
- Arthrobacter sunyaminii (isolates:3; rSTs:2)
- Arthrobacter terrae (isolates:1; rSTs:1)
- Arthrobacter terricola (isolates:1; rSTs:1)
- Arthrobacter tumbae (isolates:1; rSTs:1)
- Arthrobacter ulcerisalmonis (isolates:1; rSTs:1)
- Arthrobacter vasquezii (isolates:1)
- Arthrobacter wenxiniae (isolates:1; rSTs:1)
- Arthrobacter woluwensis (isolates:5; rSTs:4 tree)
- Arthrobacter yangruifuii (isolates:2; rSTs:2)
- Arthrobacter zhangbolii (isolates:3; rSTs:2)
- Arthrobacter zhaoguopingii (isolates:2; rSTs:2)
- Arthrobacter zhaoxinii (isolates:2; rSTs:1)
- Auritidibacter (isolates:16; rSTs:13 tree)
- Citricoccus (isolates:7; rSTs:6 tree)
- Enteractinococcus (isolates:3; rSTs:3 tree)
- Falsarthrobacter (isolates:1; rSTs:1)
- Falsarthrobacter nasiphocae (isolates:1; rSTs:1)
- Galactobacter (isolates:2; rSTs:2)
- Garicola (isolates:1)
- Garicola koreensis (isolates:1)
- Glutamicibacter (isolates:39; rSTs:35 tree)
- Glutamicibacter ardleyensis (isolates:1; rSTs:1)
- Glutamicibacter arilaitensis (isolates:4; rSTs:4 tree)
- Glutamicibacter creatinolyticus (isolates:1; rSTs:1)
- Glutamicibacter halophytocola (isolates:4; rSTs:4 tree)
- Glutamicibacter mishrai (isolates:2; rSTs:2)
- Glutamicibacter mysorens (isolates:2; rSTs:1)
- Glutamicibacter nicotianae (isolates:5; rSTs:4 tree)
- Glutamicibacter protophormiae (isolates:5; rSTs:3 tree)
- Glutamicibacter soli (isolates:2; rSTs:2)
- Glutamicibacter sp. (isolates:12; rSTs:12 tree)
- Glutamicibacter uratoxydans (isolates:1; rSTs:1)
- Haematomicrobium (isolates:1; rSTs:1)
- Haematomicrobium sanguinis (isolates:1; rSTs:1)
- Kocuria (isolates:144; rSTs:114 tree)
- Kocuria atrinae (isolates:1; rSTs:1)
- Kocuria carniphila (isolates:2; rSTs:1)
- Kocuria coralli (isolates:1; rSTs:1)
- Kocuria dechangensis (isolates:1; rSTs:1)
- Kocuria flava (isolates:5; rSTs:3)
- Kocuria indica (isolates:10; rSTs:6 tree)
- Kocuria marina (isolates:7; rSTs:7 tree)
- Kocuria massiliensis (isolates:1; rSTs:1)
- Kocuria oceani (isolates:1; rSTs:1)
- Kocuria palustris (isolates:18; rSTs:11 tree)
- Kocuria polaris (isolates:1; rSTs:1)
- Kocuria rhizophila (isolates:40; rSTs:30 tree)
- Kocuria rosea (isolates:16; rSTs:13 tree)
- Kocuria salina (isolates:1; rSTs:1)
- Kocuria salsicia (isolates:3; rSTs:3 tree)
- Kocuria sediminis (isolates:1; rSTs:1)
- Kocuria soli (isolates:1; rSTs:1)
- Kocuria sp. (isolates:26; rSTs:24 tree)
- Kocuria subflava (isolates:1; rSTs:1)
- Kocuria turfanensis (isolates:2; rSTs:1)
- Kocuria tytonicola (isolates:2; rSTs:2)
- Kocuria tytonis (isolates:1; rSTs:1)
- Kocuria varians (isolates:2; rSTs:2)
- Micrococcoides (isolates:1; rSTs:1)
- Micrococcoides hystricis (isolates:1; rSTs:1)
- Micrococcus (isolates:327; rSTs:213 tree)
- Micrococcus cohnii (isolates:1; rSTs:1)
- Micrococcus endophyticus (isolates:2; rSTs:2)
- Micrococcus flavus (isolates:4; rSTs:1)
- Micrococcus lacusdianchii (isolates:1)
- Micrococcus luteus (isolates:270; rSTs:170 tree)
- Micrococcus lylae (isolates:6; rSTs:4 tree)
- Micrococcus porci (isolates:1; rSTs:1)
- Micrococcus sp. (isolates:37; rSTs:31 tree)
- Micrococcus terreus (isolates:5; rSTs:3)
- Neomicrococcus (isolates:4; rSTs:4 tree)
- Nesterenkonia (isolates:41; rSTs:35 tree)
- Nesterenkonia aerolata (isolates:1)
- Nesterenkonia alba (isolates:1; rSTs:1)
- Nesterenkonia alkaliphila (isolates:2; rSTs:1)
- Nesterenkonia aurantiaca (isolates:1; rSTs:1)
- Nesterenkonia cremea (isolates:1; rSTs:1)
- Nesterenkonia ebinurensis (isolates:1; rSTs:1)
- Nesterenkonia flava (isolates:1; rSTs:1)
- Nesterenkonia haasae (isolates:1; rSTs:1)
- Nesterenkonia halophila (isolates:1)
- Nesterenkonia halotolerans (isolates:1; rSTs:1)
- Nesterenkonia jeotgali (isolates:2; rSTs:2)
- Nesterenkonia lacusekhoensis (isolates:1; rSTs:1)
- Nesterenkonia lutea (isolates:1; rSTs:1)
- Nesterenkonia marinintestina (isolates:1)
- Nesterenkonia massiliensis (isolates:3; rSTs:2)
- Nesterenkonia muleiensis (isolates:1; rSTs:1)
- Nesterenkonia natronophila (isolates:1; rSTs:1)
- Nesterenkonia populi (isolates:1; rSTs:1)
- Nesterenkonia salmonea (isolates:1; rSTs:1)
- Nesterenkonia sandarakina (isolates:1; rSTs:1)
- Nesterenkonia sedimenti (isolates:1; rSTs:1)
- Nesterenkonia sp. (isolates:14; rSTs:13 tree)
- Nesterenkonia sphaerica (isolates:1; rSTs:1)
- Nesterenkonia xinjiangensis (isolates:1; rSTs:1)
- Paenarthrobacter (isolates:62; rSTs:43 tree)
- Paenarthrobacter aurescens (isolates:5; rSTs:1)
- Paenarthrobacter histidinolovorans (isolates:1; rSTs:1)
- Paenarthrobacter ilicis (isolates:3; rSTs:3)
- Paenarthrobacter nicotinovorans (isolates:8; rSTs:4 tree)
- Paenarthrobacter nitroguajacolicus (isolates:3; rSTs:3 tree)
- Paenarthrobacter sp. (isolates:23; rSTs:22 tree)
- Paenarthrobacter ureafaciens (isolates:19; rSTs:9 tree)
- Paeniglutamicibacter (isolates:13; rSTs:13 tree)
- Paeniglutamicibacter antarcticus (isolates:1; rSTs:1)
- Paeniglutamicibacter cryotolerans (isolates:1; rSTs:1)
- Paeniglutamicibacter gangotriensis (isolates:2; rSTs:2)
- Paeniglutamicibacter kerguelensis (isolates:1; rSTs:1)
- Paeniglutamicibacter psychrophenolicus (isolates:2; rSTs:2)
- Paeniglutamicibacter quisquiliarum (isolates:1; rSTs:1)
- Paeniglutamicibacter sp. (isolates:2; rSTs:2)
- Paeniglutamicibacter sulfureus (isolates:2; rSTs:2)
- Paeniglutamicibacter terrestris (isolates:1; rSTs:1)
- Pseudarthrobacter (isolates:56; rSTs:49 tree)
- Pseudarthrobacter albicanus (isolates:1; rSTs:1)
- Pseudarthrobacter chlorophenolicus (isolates:3; rSTs:3 tree)
- Pseudarthrobacter enclensis (isolates:2; rSTs:1)
- Pseudarthrobacter equi (isolates:2; rSTs:2)
- Pseudarthrobacter humi (isolates:1; rSTs:1)
- Pseudarthrobacter oxydans (isolates:3; rSTs:2)
- Pseudarthrobacter phenanthrenivorans (isolates:3; rSTs:3 tree)
- Pseudarthrobacter polychromogenes (isolates:1; rSTs:1)
- Pseudarthrobacter psychrotolerans (isolates:1; rSTs:1)
- Pseudarthrobacter scleromae (isolates:1; rSTs:1)
- Pseudarthrobacter siccitolerans (isolates:1; rSTs:1)
- Pseudarthrobacter sp. (isolates:35; rSTs:30 tree)
- Pseudarthrobacter sulfonivorans (isolates:1; rSTs:1)
- [Micrococcus luteus] (isolates:1; rSTs:1)
- Pseudoglutamicibacter (isolates:9; rSTs:9 tree)
- Psychromicrobium (isolates:2; rSTs:2)
- Renibacterium (isolates:13; rSTs:6 tree)
- Rothia (isolates:196; rSTs:152 tree)
- Rothia aeria (isolates:13; rSTs:12 tree)
- Rothia aerolata (isolates:1; rSTs:1)
- Rothia amarae (isolates:1; rSTs:1)
- Rothia dentocariosa (isolates:22; rSTs:18 tree)
- Rothia endophytica (isolates:1; rSTs:1)
- Rothia halotolerans (isolates:1; rSTs:1)
- Rothia koreensis (isolates:2; rSTs:1)
- Rothia kristinae (isolates:28; rSTs:12 tree)
- Rothia mucilaginosa (isolates:28; rSTs:25 tree)
- Rothia nasimurium (isolates:39; rSTs:22 tree)
- Rothia nasisuis (isolates:6; rSTs:4 tree)
- Rothia santali (isolates:1; rSTs:1)
- Rothia sp. (isolates:50; rSTs:50 tree)
- Rothia terrae (isolates:3; rSTs:3 tree)
- Sinomonas (isolates:17; rSTs:14 tree)
- Sinomonas albida (isolates:2; rSTs:2)
- Sinomonas atrocyanea (isolates:3; rSTs:1)
- Sinomonas cellulolyticus (isolates:1; rSTs:1)
- Sinomonas gamaensis (isolates:1; rSTs:1)
- Sinomonas humi (isolates:1; rSTs:1)
- Sinomonas mesophila (isolates:1; rSTs:1)
- Sinomonas notoginsengisoli (isolates:1; rSTs:1)
- Sinomonas sp. (isolates:5; rSTs:4 tree)
- Sinomonas susongensis (isolates:1; rSTs:1)
- Sinomonas terrae (isolates:1; rSTs:1)
- Specibacter (isolates:1; rSTs:1)
- Specibacter cremeus (isolates:1; rSTs:1)
- Tersicoccus (isolates:4; rSTs:4 tree)
- Yaniella (isolates:1; rSTs:1)
- Yaniella halotolerans (isolates:1; rSTs:1)
- Zafaria (isolates:1; rSTs:1)
- Zafaria cholistanensis (isolates:1; rSTs:1)
- Zhihengliuella (isolates:4; rSTs:4 tree)
- Acaricomes (isolates:2; rSTs:1)
- Ornithinimicrobiaceae (isolates:39; rSTs:30 tree)
- Ornithinimicrobium (isolates:27; rSTs:19 tree)
- Ornithinimicrobium avium (isolates:1; rSTs:1)
- Ornithinimicrobium cerasi (isolates:2; rSTs:2)
- Ornithinimicrobium ciconiae (isolates:1; rSTs:1)
- Ornithinimicrobium cryptoxanthini (isolates:4; rSTs:2)
- Ornithinimicrobium flavum (isolates:1; rSTs:1)
- Ornithinimicrobium humiphilum (isolates:1; rSTs:1)
- Ornithinimicrobium kibberense (isolates:1; rSTs:1)
- Ornithinimicrobium laminariae (isolates:1; rSTs:1)
- Ornithinimicrobium murale (isolates:1)
- Ornithinimicrobium pekingense (isolates:2; rSTs:1)
- Ornithinimicrobium pratense (isolates:1; rSTs:1)
- Ornithinimicrobium sediminis (isolates:1; rSTs:1)
- Ornithinimicrobium sp. (isolates:9; rSTs:5 tree)
- Ornithinimicrobium tianjinense (isolates:1; rSTs:1)
- Serinicoccus (isolates:12; rSTs:11 tree)
- Serinicoccus chungangensis (isolates:2; rSTs:2)
- Serinicoccus hydrothermalis (isolates:1; rSTs:1)
- Serinicoccus kebangsaanensis (isolates:1; rSTs:1)
- Serinicoccus marinus (isolates:3; rSTs:3 tree)
- Serinicoccus profundi (isolates:2; rSTs:1)
- Serinicoccus sediminis (isolates:1; rSTs:1)
- Serinicoccus sp. (isolates:2; rSTs:2)
- Ornithinimicrobium (isolates:27; rSTs:19 tree)
- Promicromonosporaceae (isolates:88; rSTs:83 tree)
- Antribacter (isolates:1; rSTs:1)
- Antribacter soli (isolates:1; rSTs:1)
- Cellulosimicrobium (isolates:37; rSTs:36 tree)
- Cellulosimicrobium aquatile (isolates:2; rSTs:2)
- Cellulosimicrobium arenosum (isolates:1; rSTs:1)
- Cellulosimicrobium cellulans (isolates:15; rSTs:13 tree)
- Cellulosimicrobium composti (isolates:2; rSTs:2)
- Cellulosimicrobium funkei (isolates:2; rSTs:1)
- Cellulosimicrobium marinum (isolates:1; rSTs:1)
- Cellulosimicrobium protaetiae (isolates:1; rSTs:1)
- Cellulosimicrobium sp. (isolates:13; rSTs:15 tree)
- Isoptericola (isolates:20; rSTs:18 tree)
- Isoptericola chiayiensis (isolates:1; rSTs:1)
- Isoptericola croceus (isolates:1; rSTs:1)
- Isoptericola cucumis (isolates:1; rSTs:1)
- Isoptericola dokdonensis (isolates:1; rSTs:1)
- Isoptericola halalbus (isolates:1; rSTs:1)
- Isoptericola halotolerans (isolates:2; rSTs:2)
- Isoptericola jiangsuensis (isolates:1; rSTs:1)
- Isoptericola sediminis (isolates:1; rSTs:1)
- Isoptericola sp. (isolates:9; rSTs:8 tree)
- Isoptericola variabilis (isolates:2; rSTs:1)
- Krasilnikoviella (isolates:1; rSTs:1)
- Krasilnikoviella flava (isolates:1; rSTs:1)
- Myceligenerans (isolates:5; rSTs:3 tree)
- Promicromonospora (isolates:17; rSTs:17 tree)
- Promicromonospora citrea (isolates:2; rSTs:1)
- Promicromonospora iranensis (isolates:3; rSTs:2)
- Promicromonospora kroppenstedtii (isolates:1; rSTs:1)
- Promicromonospora panici (isolates:1; rSTs:1)
- Promicromonospora soli (isolates:1; rSTs:1)
- Promicromonospora sp. (isolates:5; rSTs:7 tree)
- Promicromonospora sukumoe (isolates:1; rSTs:1)
- Promicromonospora thailandica (isolates:2; rSTs:2)
- Promicromonospora umidemergens (isolates:1; rSTs:1)
- Puerhibacterium (isolates:1; rSTs:1)
- Puerhibacterium puerhi (isolates:1; rSTs:1)
- Xylanibacterium (isolates:1; rSTs:1)
- Xylanibacterium ulmi (isolates:1; rSTs:1)
- Xylanimicrobium (isolates:1; rSTs:1)
- Xylanimicrobium pachnodae (isolates:1; rSTs:1)
- Xylanimonas (isolates:4; rSTs:4 tree)
- Antribacter (isolates:1; rSTs:1)
- Rarobacteraceae (isolates:2; rSTs:2)
- Ruaniaceae (isolates:13; rSTs:12 tree)
- Sanguibacteraceae (isolates:11; rSTs:10 tree)
- Sanguibacter (isolates:11; rSTs:10 tree)
- Sanguibacter antarcticus (isolates:1; rSTs:1)
- Sanguibacter gelidistatuariae (isolates:1; rSTs:1)
- Sanguibacter hominis (isolates:1; rSTs:1)
- Sanguibacter inulinus (isolates:2; rSTs:1)
- Sanguibacter keddieii (isolates:1; rSTs:1)
- Sanguibacter massiliensis (isolates:1; rSTs:1)
- Sanguibacter sp. (isolates:2; rSTs:2)
- Sanguibacter suaedae (isolates:1; rSTs:1)
- Sanguibacter suarezii (isolates:1; rSTs:1)
- Sanguibacter (isolates:11; rSTs:10 tree)
- Tropherymataceae (isolates:19; rSTs:16 tree)
- Micromonosporales (isolates:634; rSTs:535 tree)
- Micromonosporaceae (isolates:634; rSTs:535 tree)
- Actinocatenispora (isolates:5; rSTs:4 tree)
- Actinoplanes (isolates:91; rSTs:66 tree)
- Actinoplanes abujensis (isolates:2; rSTs:1)
- Actinoplanes aksuensis (isolates:1; rSTs:1)
- Actinoplanes atraurantiacus (isolates:1; rSTs:1)
- Actinoplanes auranticolor (isolates:1; rSTs:1)
- Actinoplanes aureus (isolates:1; rSTs:1)
- Actinoplanes awajinensis (isolates:1; rSTs:1)
- Actinoplanes bogorensis (isolates:1; rSTs:1)
- Actinoplanes brasiliensis (isolates:2; rSTs:1)
- Actinoplanes campanulatus (isolates:3; rSTs:1)
- Actinoplanes capillaceus (isolates:1; rSTs:1)
- Actinoplanes consettensis (isolates:1; rSTs:1)
- Actinoplanes couchii (isolates:2; rSTs:1)
- Actinoplanes cyaneus (isolates:2; rSTs:1)
- Actinoplanes deccanensis (isolates:1; rSTs:1)
- Actinoplanes derwentensis (isolates:2; rSTs:1)
- Actinoplanes digitatis (isolates:2; rSTs:1)
- Actinoplanes durhamensis (isolates:1; rSTs:1)
- Actinoplanes ferrugineus (isolates:1; rSTs:1)
- Actinoplanes flavus (isolates:1; rSTs:1)
- Actinoplanes friuliensis (isolates:1; rSTs:1)
- Actinoplanes globisporus (isolates:1; rSTs:1)
- Actinoplanes hotanensis (isolates:1; rSTs:1)
- Actinoplanes hulinensis (isolates:1; rSTs:1)
- Actinoplanes humidus (isolates:1; rSTs:1)
- Actinoplanes ianthinogenes (isolates:2; rSTs:1)
- Actinoplanes italicus (isolates:2; rSTs:1)
- Actinoplanes lichenicola (isolates:1; rSTs:1)
- Actinoplanes liguriensis (isolates:1)
- Actinoplanes lobatus (isolates:3; rSTs:1)
- Actinoplanes lutulentus (isolates:2; rSTs:1)
- Actinoplanes maris (isolates:1; rSTs:1)
- Actinoplanes missouriensis (isolates:1; rSTs:1)
- Actinoplanes nipponensis (isolates:1; rSTs:1)
- Actinoplanes oblitus (isolates:1)
- Actinoplanes octamycinicus (isolates:2; rSTs:1)
- Actinoplanes ovalisporus (isolates:1; rSTs:1)
- Actinoplanes palleronii (isolates:1; rSTs:1)
- Actinoplanes philippinensis (isolates:2; rSTs:1)
- Actinoplanes polyasparticus (isolates:1; rSTs:1)
- Actinoplanes pyxinae (isolates:1)
- Actinoplanes rectilineatus (isolates:1; rSTs:1)
- Actinoplanes regularis (isolates:3; rSTs:2)
- Actinoplanes rishiriensis (isolates:1; rSTs:1)
- Actinoplanes sandaracinus (isolates:1)
- Actinoplanes siamensis (isolates:1; rSTs:1)
- Actinoplanes sichuanensis (isolates:1; rSTs:1)
- Actinoplanes solisilvae (isolates:1; rSTs:1)
- Actinoplanes sp. (isolates:15; rSTs:16 tree)
- Actinoplanes subtropicus (isolates:1; rSTs:1)
- Actinoplanes teichomyceticus (isolates:4; rSTs:1)
- Actinoplanes tereljensis (isolates:1; rSTs:1)
- Actinoplanes toevensis (isolates:1; rSTs:1)
- Actinoplanes utahensis (isolates:2; rSTs:1)
- Actinoplanes xinjiangensis (isolates:2; rSTs:1)
- Ampullariella violaceochromogenes (isolates:1)
- Actinorhabdospora (isolates:1; rSTs:1)
- Actinorhabdospora filicis (isolates:1; rSTs:1)
- Allocatelliglobosispora (isolates:1; rSTs:1)
- Allocatelliglobosispora scoriae (isolates:1; rSTs:1)
- Allorhizocola (isolates:1; rSTs:1)
- Allorhizocola rhizosphaerae (isolates:1; rSTs:1)
- Asanoa (isolates:8; rSTs:6 tree)
- Catellatospora (isolates:14; rSTs:12 tree)
- Catellatospora bangladeshensis (isolates:1; rSTs:1)
- Catellatospora chokoriensis (isolates:2; rSTs:1)
- Catellatospora citrea (isolates:1; rSTs:1)
- Catellatospora coxensis (isolates:1; rSTs:1)
- Catellatospora methionotrophica (isolates:2; rSTs:1)
- Catellatospora paridis (isolates:1; rSTs:1)
- Catellatospora sichuanensis (isolates:1; rSTs:1)
- Catellatospora sp. (isolates:3; rSTs:3 tree)
- Catellatospora tritici (isolates:1; rSTs:1)
- Catellatospora vulcania (isolates:1; rSTs:1)
- Catelliglobosispora (isolates:1; rSTs:1)
- Catelliglobosispora koreensis (isolates:1; rSTs:1)
- Catenuloplanes (isolates:12; rSTs:5 tree)
- Catenuloplanes atrovinosus (isolates:2; rSTs:1)
- Catenuloplanes castaneus (isolates:1)
- Catenuloplanes crispus (isolates:1)
- Catenuloplanes indicus (isolates:2; rSTs:1)
- Catenuloplanes japonicus (isolates:2; rSTs:1)
- Catenuloplanes nepalensis (isolates:2; rSTs:1)
- Catenuloplanes niger (isolates:2; rSTs:1)
- Couchioplanes (isolates:3; rSTs:2)
- Couchioplanes caeruleus (isolates:3; rSTs:2)
- Dactylosporangium (isolates:13; rSTs:9 tree)
- Dactylosporangium aurantiacum (isolates:4; rSTs:1)
- Dactylosporangium fulvum (isolates:1; rSTs:1)
- Dactylosporangium matsuzakiense (isolates:2; rSTs:1)
- Dactylosporangium roseum (isolates:1; rSTs:1)
- Dactylosporangium siamense (isolates:1; rSTs:1)
- Dactylosporangium sp. (isolates:2; rSTs:2)
- Dactylosporangium sucinum (isolates:1; rSTs:1)
- Dactylosporangium vinaceum (isolates:1; rSTs:1)
- Hamadaea (isolates:2; rSTs:2)
- Jidongwangia (isolates:1; rSTs:1)
- Jidongwangia harbinensis (isolates:1; rSTs:1)
- Krasilnikovia (isolates:1; rSTs:1)
- Krasilnikovia cinnamomea (isolates:1; rSTs:1)
- Longispora (isolates:3; rSTs:2)
- Mangrovihabitans (isolates:1; rSTs:1)
- Mangrovihabitans endophyticus (isolates:1; rSTs:1)
- Micromonospora (isolates:344; rSTs:309 tree)
- Micromonospora acroterricola (isolates:1; rSTs:1)
- Micromonospora alfalfae (isolates:1; rSTs:1)
- Micromonospora andamanensis (isolates:2; rSTs:2)
- Micromonospora antibiotica (isolates:1; rSTs:1)
- Micromonospora arborensis (isolates:1; rSTs:1)
- Micromonospora arida (isolates:1; rSTs:1)
- Micromonospora aurantiaca (isolates:4; rSTs:4 tree)
- Micromonospora auratinigra (isolates:1; rSTs:1)
- Micromonospora avicenniae (isolates:1; rSTs:1)
- Micromonospora cabrerizensis (isolates:1; rSTs:1)
- Micromonospora carbonacea (isolates:3; rSTs:2)
- Micromonospora chaiyaphumensis (isolates:1; rSTs:1)
- Micromonospora chalcea (isolates:6; rSTs:5 tree)
- Micromonospora chersina (isolates:1; rSTs:1)
- Micromonospora chokoriensis (isolates:1; rSTs:1)
- Micromonospora citrea (isolates:1; rSTs:1)
- Micromonospora coriariae (isolates:1; rSTs:1)
- Micromonospora costi (isolates:1; rSTs:1)
- Micromonospora coxensis (isolates:1; rSTs:1)
- Micromonospora craniellae (isolates:2; rSTs:1)
- Micromonospora craterilacus (isolates:1; rSTs:1)
- Micromonospora cremea (isolates:1; rSTs:1)
- Micromonospora deserti (isolates:1; rSTs:1)
- Micromonospora eburnea (isolates:1; rSTs:1)
- Micromonospora echinaurantiaca (isolates:1; rSTs:1)
- Micromonospora echinofusca (isolates:1; rSTs:1)
- Micromonospora echinospora (isolates:3; rSTs:2)
- Micromonospora endolithica (isolates:2; rSTs:1)
- Micromonospora endophytica (isolates:3; rSTs:1)
- Micromonospora ferruginea (isolates:1; rSTs:1)
- Micromonospora fiedleri (isolates:1; rSTs:1)
- Micromonospora foliorum (isolates:1; rSTs:1)
- Micromonospora fulviviridis (isolates:1; rSTs:1)
- Micromonospora gifhornensis (isolates:1; rSTs:1)
- Micromonospora globbae (isolates:2; rSTs:2)
- Micromonospora globispora (isolates:3; rSTs:3 tree)
- Micromonospora globosa (isolates:1; rSTs:1)
- Micromonospora haikouensis (isolates:2; rSTs:2)
- Micromonospora halophytica (isolates:1; rSTs:1)
- Micromonospora halotolerans (isolates:1; rSTs:1)
- Micromonospora hortensis (isolates:1; rSTs:1)
- Micromonospora humi (isolates:1; rSTs:1)
- Micromonospora humida (isolates:1; rSTs:1)
- Micromonospora humidisoli (isolates:1; rSTs:1)
- Micromonospora inaquosa (isolates:1; rSTs:1)
- Micromonospora inositola (isolates:1; rSTs:1)
- Micromonospora inyonensis (isolates:1; rSTs:1)
- Micromonospora jinlongensis (isolates:1; rSTs:1)
- Micromonospora kangleipakensis (isolates:1; rSTs:1)
- Micromonospora krabiensis (isolates:1; rSTs:1)
- Micromonospora lupini (isolates:2; rSTs:2)
- Micromonospora lutea (isolates:1; rSTs:1)
- Micromonospora luteifusca (isolates:1; rSTs:1)
- Micromonospora marina (isolates:1; rSTs:1)
- Micromonospora maris (isolates:2; rSTs:1)
- Micromonospora maritima (isolates:1; rSTs:1)
- Micromonospora matsumotoense (isolates:1; rSTs:1)
- Micromonospora mirobrigensis (isolates:1; rSTs:1)
- Micromonospora musae (isolates:2; rSTs:2)
- Micromonospora narathiwatensis (isolates:1; rSTs:1)
- Micromonospora nigra (isolates:1; rSTs:1)
- Micromonospora noduli (isolates:7; rSTs:7 tree)
- Micromonospora okii (isolates:1; rSTs:1)
- Micromonospora olivasterospora (isolates:1; rSTs:1)
- Micromonospora orduensis (isolates:1; rSTs:1)
- Micromonospora pallida (isolates:1; rSTs:1)
- Micromonospora palomenae (isolates:1; rSTs:1)
- Micromonospora parastrephiae (isolates:1)
- Micromonospora parathelypteridis (isolates:2; rSTs:1)
- Micromonospora parva (isolates:1; rSTs:1)
- Micromonospora pattaloongensis (isolates:1; rSTs:1)
- Micromonospora peucetia (isolates:3; rSTs:3)
- Micromonospora phaseoli (isolates:3; rSTs:1)
- Micromonospora phytophila (isolates:1; rSTs:1)
- Micromonospora pisi (isolates:1; rSTs:1)
- Micromonospora polyrhachis (isolates:1; rSTs:1)
- Micromonospora profundi (isolates:3; rSTs:3)
- Micromonospora provocatoris (isolates:1)
- Micromonospora purpureochromogenes (isolates:2; rSTs:2)
- Micromonospora qiuiae (isolates:1; rSTs:1)
- Micromonospora radicis (isolates:1; rSTs:1)
- Micromonospora rhizosphaerae (isolates:1; rSTs:1)
- Micromonospora rifamycinica (isolates:3; rSTs:3)
- Micromonospora rosaria (isolates:1; rSTs:1)
- Micromonospora rubida (isolates:1; rSTs:1)
- Micromonospora saelicesensis (isolates:6; rSTs:6 tree)
- Micromonospora sagamiensis (isolates:2; rSTs:1)
- Micromonospora salmantinae (isolates:1; rSTs:1)
- Micromonospora sediminicola (isolates:1; rSTs:1)
- Micromonospora sediminimaris (isolates:1; rSTs:1)
- Micromonospora siamensis (isolates:1; rSTs:1)
- Micromonospora solifontis (isolates:2; rSTs:1)
- Micromonospora sonchi (isolates:1; rSTs:1)
- Micromonospora sp. (isolates:166; rSTs:151 tree)
- Micromonospora tarapacensis (isolates:1; rSTs:1)
- Micromonospora taraxaci (isolates:1; rSTs:1)
- Micromonospora tarensis (isolates:1; rSTs:1)
- Micromonospora terminaliae (isolates:2; rSTs:1)
- Micromonospora thermarum (isolates:1; rSTs:1)
- Micromonospora trifolii (isolates:1; rSTs:1)
- Micromonospora tulbaghiae (isolates:4; rSTs:3 tree)
- Micromonospora ureilytica (isolates:4; rSTs:3)
- Micromonospora veneta (isolates:1; rSTs:1)
- Micromonospora vinacea (isolates:1; rSTs:1)
- Micromonospora violae (isolates:1; rSTs:1)
- Micromonospora viridifaciens (isolates:1; rSTs:1)
- Micromonospora wenchangensis (isolates:1; rSTs:1)
- Micromonospora yangpuensis (isolates:2; rSTs:1)
- Micromonospora yasonensis (isolates:1; rSTs:1)
- Micromonospora zamorensis (isolates:7; rSTs:7)
- Micromonospora zingiberis (isolates:1; rSTs:1)
- Verrucosispora sioxanthis (isolates:2; rSTs:1)
- Verrucosispora sp. (isolates:5; rSTs:5 tree)
- Natronosporangium (isolates:1)
- Natronosporangium hydrolyticum (isolates:1)
- Nucisporomicrobium (isolates:1)
- Nucisporomicrobium flavum (isolates:1)
- Phytohabitans (isolates:6; rSTs:6 tree)
- Phytomonospora (isolates:2; rSTs:1)
- Phytomonospora endophytica (isolates:2; rSTs:1)
- Pilimelia (isolates:2; rSTs:2)
- Planosporangium (isolates:5; rSTs:3 tree)
- Plantactinospora (isolates:9; rSTs:9 tree)
- Polymorphospora (isolates:1; rSTs:1)
- Polymorphospora rubra (isolates:1; rSTs:1)
- Pseudosporangium (isolates:1; rSTs:1)
- Pseudosporangium ferrugineum (isolates:1; rSTs:1)
- Rhizocola (isolates:1; rSTs:1)
- Rhizocola hellebori (isolates:1; rSTs:1)
- Rugosimonospora (isolates:1; rSTs:1)
- Rugosimonospora africana (isolates:1; rSTs:1)
- Salinispora (isolates:93; rSTs:78 tree)
- Salinispora arenicola (isolates:53; rSTs:43 tree)
- Salinispora cortesiana (isolates:1; rSTs:1)
- Salinispora fenicalii (isolates:2; rSTs:2)
- Salinispora mooreana (isolates:3; rSTs:2)
- Salinispora oceanensis (isolates:3; rSTs:2)
- Salinispora pacifica (isolates:17; rSTs:16 tree)
- Salinispora sp. (isolates:1; rSTs:1)
- Salinispora tropica (isolates:11; rSTs:10 tree)
- Salinispora vitiensis (isolates:2; rSTs:1)
- Solwaraspora (isolates:4; rSTs:4 tree)
- Spirilliplanes (isolates:2; rSTs:1)
- Spirilliplanes yamanashiensis (isolates:2; rSTs:1)
- Virgisporangium (isolates:3; rSTs:3 tree)
- Micromonosporaceae (isolates:634; rSTs:535 tree)
- Motilibacterales (isolates:5; rSTs:5 tree)
- Mycobacteriales (isolates:20541; rSTs:5711)
- Corynebacteriaceae (isolates:2410; rSTs:1367 tree)
- Corynebacterium (isolates:2410; rSTs:1367 tree)
- Corynebacterium accolens (isolates:41; rSTs:26 tree)
- Corynebacterium afermentans (isolates:2; rSTs:1)
- Corynebacterium alimapuense (isolates:1; rSTs:1)
- Corynebacterium ammoniagenes (isolates:6; rSTs:3 tree)
- Corynebacterium amycolatum (isolates:38; rSTs:28 tree)
- Corynebacterium anserum (isolates:2; rSTs:2)
- Corynebacterium antarcticum (isolates:6; rSTs:6 tree)
- Corynebacterium appendicis (isolates:3; rSTs:3 tree)
- Corynebacterium aquatimens (isolates:2; rSTs:1)
- Corynebacterium aquilae (isolates:1; rSTs:1)
- Corynebacterium argentoratense (isolates:8; rSTs:5 tree)
- Corynebacterium atrinae (isolates:1; rSTs:1)
- Corynebacterium atypicum (isolates:1; rSTs:1)
- Corynebacterium aurimucosum (isolates:24; rSTs:12 tree)
- Corynebacterium auris (isolates:1; rSTs:1)
- Corynebacterium auriscanis (isolates:3; rSTs:2)
- Corynebacterium belfantii (isolates:17; rSTs:14 tree)
- Corynebacterium bouchesdurhonense (isolates:2; rSTs:1)
- Corynebacterium bovis (isolates:30; rSTs:16 tree)
- Corynebacterium breve (isolates:1; rSTs:1)
- Corynebacterium callunae (isolates:3; rSTs:2)
- Corynebacterium camporealensis (isolates:2; rSTs:1)
- Corynebacterium canis (isolates:2; rSTs:1)
- Corynebacterium capitovis (isolates:2; rSTs:1)
- Corynebacterium casei (isolates:4; rSTs:4 tree)
- Corynebacterium caspium (isolates:2; rSTs:1)
- Corynebacterium choanae (isolates:1; rSTs:1)
- Corynebacterium ciconiae (isolates:2; rSTs:1)
- Corynebacterium comes (isolates:1; rSTs:1)
- Corynebacterium confusum (isolates:1; rSTs:1)
- Corynebacterium coyleae (isolates:15; rSTs:10 tree)
- Corynebacterium crudilactis (isolates:1; rSTs:1)
- Corynebacterium curieae (isolates:2; rSTs:2)
- Corynebacterium cystitidis (isolates:8; rSTs:6 tree)
- Corynebacterium dentalis (isolates:1; rSTs:1)
- Corynebacterium deserti (isolates:1; rSTs:1)
- Corynebacterium diphtheriae (isolates:661; rSTs:315 tree)
- Corynebacterium doosanense (isolates:2; rSTs:1)
- Corynebacterium durum (isolates:3; rSTs:2)
- Corynebacterium efficiens (isolates:2; rSTs:1)
- Corynebacterium endometrii (isolates:1; rSTs:1)
- Corynebacterium epidermidicanis (isolates:1; rSTs:1)
- Corynebacterium evansiae (isolates:1; rSTs:1)
- Corynebacterium faecale (isolates:1; rSTs:1)
- Corynebacterium faecium (isolates:1; rSTs:1)
- Corynebacterium falsenii (isolates:5; rSTs:4 tree)
- Corynebacterium felinum (isolates:3; rSTs:1)
- Corynebacterium flavescens (isolates:3; rSTs:1)
- Corynebacterium fournieri (isolates:2; rSTs:1)
- Corynebacterium frankenforstense (isolates:2; rSTs:2)
- Corynebacterium freiburgense (isolates:2; rSTs:1)
- Corynebacterium freneyi (isolates:7; rSTs:5 tree)
- Corynebacterium gallinarum (isolates:1; rSTs:1)
- Corynebacterium genitalium (isolates:2; rSTs:1)
- Corynebacterium gerontici (isolates:1; rSTs:1)
- Corynebacterium glaucum (isolates:2; rSTs:2)
- Corynebacterium glucuronolyticum (isolates:11; rSTs:6 tree)
- Corynebacterium glutamicum (isolates:79; rSTs:42 tree)
- Corynebacterium glyciniphilum (isolates:2; rSTs:2)
- Corynebacterium godavarianum (isolates:2; rSTs:1)
- Corynebacterium gottingense (isolates:3; rSTs:2)
- Corynebacterium guangdongense (isolates:2; rSTs:1)
- Corynebacterium guaraldiae (isolates:5; rSTs:4 tree)
- Corynebacterium hadale (isolates:2; rSTs:1)
- Corynebacterium haemomassiliense (isolates:1; rSTs:1)
- Corynebacterium halotolerans (isolates:2; rSTs:1)
- Corynebacterium hansenii (isolates:1; rSTs:1)
- Corynebacterium heidelbergense (isolates:3; rSTs:2)
- Corynebacterium hesseae (isolates:1; rSTs:1)
- Corynebacterium hindlerae (isolates:2; rSTs:2)
- Corynebacterium humireducens (isolates:2; rSTs:1)
- Corynebacterium hylobatis (isolates:1; rSTs:1)
- Corynebacterium ihumii (isolates:2; rSTs:1)
- Corynebacterium imitans (isolates:6; rSTs:3 tree)
- Corynebacterium incognita (isolates:1; rSTs:1)
- Corynebacterium intestinale (isolates:2; rSTs:1)
- Corynebacterium jeddahense (isolates:2; rSTs:1)
- Corynebacterium jeikeium (isolates:16; rSTs:13 tree)
- Corynebacterium kalidii (isolates:1; rSTs:1)
- Corynebacterium kalinowskii (isolates:1; rSTs:1)
- Corynebacterium kefirresidentii (isolates:16; rSTs:13 tree)
- Corynebacterium kroppenstedtii (isolates:2; rSTs:1)
- Corynebacterium kutscheri (isolates:4; rSTs:3 tree)
- Corynebacterium lactis (isolates:2; rSTs:2)
- Corynebacterium lehmanniae (isolates:2; rSTs:2)
- Corynebacterium lemuris (isolates:1; rSTs:1)
- Corynebacterium liangguodongii (isolates:2; rSTs:1)
- Corynebacterium lipophiloflavum (isolates:1; rSTs:1)
- Corynebacterium lipophilum (isolates:2; rSTs:1)
- Corynebacterium lizhenjunii (isolates:2; rSTs:2)
- Corynebacterium lowii (isolates:2; rSTs:1)
- Corynebacterium lubricantis (isolates:1; rSTs:1)
- Corynebacterium lujinxingii (isolates:3; rSTs:1)
- Corynebacterium macclintockiae (isolates:3; rSTs:3 tree)
- Corynebacterium macginleyi (isolates:26; rSTs:24 tree)
- Corynebacterium marambiense (isolates:3; rSTs:2)
- Corynebacterium marinum (isolates:2; rSTs:1)
- Corynebacterium maris (isolates:1; rSTs:1)
- Corynebacterium marquesiae (isolates:13; rSTs:8 tree)
- Corynebacterium massiliense (isolates:3; rSTs:1)
- Corynebacterium mastitidis (isolates:7; rSTs:4 tree)
- Corynebacterium matruchotii (isolates:6; rSTs:3 tree)
- Corynebacterium megadyptis (isolates:2; rSTs:2)
- Corynebacterium meitnerae (isolates:1; rSTs:1)
- Corynebacterium mendelii (isolates:1)
- Corynebacterium meridianum (isolates:2; rSTs:2)
- Corynebacterium minutissimum (isolates:10; rSTs:2)
- Corynebacterium mucifaciens (isolates:1; rSTs:1)
- Corynebacterium mustelae (isolates:1; rSTs:1)
- Corynebacterium mycetoides (isolates:1; rSTs:1)
- Corynebacterium neomassiliense (isolates:1; rSTs:1)
- Corynebacterium nuruki (isolates:2; rSTs:1)
- Corynebacterium occultum (isolates:1; rSTs:1)
- Corynebacterium oculi (isolates:1; rSTs:1)
- Corynebacterium otitidis (isolates:3; rSTs:2)
- Corynebacterium pacaense (isolates:1; rSTs:1)
- Corynebacterium parakroppenstedtii (isolates:22; rSTs:9 tree)
- Corynebacterium pelargi (isolates:2; rSTs:1)
- Corynebacterium phocae (isolates:2; rSTs:1)
- Corynebacterium phoceense (isolates:9; rSTs:9 tree)
- Corynebacterium pilbarense (isolates:1; rSTs:1)
- Corynebacterium pilosum (isolates:3; rSTs:1)
- Corynebacterium pollutisoli (isolates:1; rSTs:1)
- Corynebacterium poyangense (isolates:2; rSTs:2)
- Corynebacterium propinquum (isolates:40; rSTs:24 tree)
- Corynebacterium provencense (isolates:2; rSTs:1)
- Corynebacterium pseudodiphtheriticum (isolates:57; rSTs:36 tree)
- Corynebacterium pseudokroppenstedtii (isolates:7; rSTs:5 tree)
- Corynebacterium pseudopelargi (isolates:1; rSTs:1)
- Corynebacterium pseudotuberculosis (isolates:210; rSTs:44 tree)
- Corynebacterium pygosceleis (isolates:5; rSTs:4 tree)
- Corynebacterium pyruviciproducens (isolates:9; rSTs:5 tree)
- Corynebacterium qintianiae (isolates:2; rSTs:2)
- Corynebacterium ramonii (isolates:1; rSTs:1)
- Corynebacterium renale (isolates:5; rSTs:4 tree)
- Corynebacterium resistens (isolates:1; rSTs:1)
- Corynebacterium riegelii (isolates:4; rSTs:4 tree)
- Corynebacterium rouxii (isolates:3; rSTs:2)
- Corynebacterium sanguinis (isolates:34; rSTs:30 tree)
- Corynebacterium segmentosum (isolates:1; rSTs:1)
- Corynebacterium senegalense (isolates:1; rSTs:1)
- Corynebacterium silvaticum (isolates:15; rSTs:6 tree)
- Corynebacterium simulans (isolates:6; rSTs:6 tree)
- Corynebacterium singulare (isolates:3; rSTs:2)
- Corynebacterium sp. (isolates:267; rSTs:239 tree)
- Corynebacterium sphenisci (isolates:1; rSTs:1)
- Corynebacterium spheniscorum (isolates:2; rSTs:1)
- Corynebacterium sputi (isolates:1; rSTs:1)
- Corynebacterium stationis (isolates:8; rSTs:8 tree)
- Corynebacterium stercoris (isolates:1)
- Corynebacterium striatum (isolates:346; rSTs:128 tree)
- Corynebacterium suedekumii (isolates:1; rSTs:1)
- Corynebacterium suicordis (isolates:2; rSTs:1)
- Corynebacterium suranareeae (isolates:1; rSTs:1)
- Corynebacterium tapiri (isolates:1; rSTs:1)
- Corynebacterium terpenotabidum (isolates:1; rSTs:1)
- Corynebacterium testudinoris (isolates:2; rSTs:2)
- Corynebacterium timonense (isolates:2; rSTs:1)
- Corynebacterium tuberculostearicum (isolates:20; rSTs:18 tree)
- Corynebacterium tuscaniense (isolates:3; rSTs:2)
- Corynebacterium uberis (isolates:6; rSTs:3 tree)
- Corynebacterium ulcerans (isolates:36; rSTs:30 tree)
- Corynebacterium ulceribovis (isolates:1; rSTs:1)
- Corynebacterium urealyticum (isolates:11; rSTs:8 tree)
- Corynebacterium ureicelerivorans (isolates:3; rSTs:3 tree)
- Corynebacterium urinipleomorphum (isolates:1; rSTs:1)
- Corynebacterium urogenitale (isolates:1; rSTs:1)
- Corynebacterium uropygiale (isolates:1; rSTs:1)
- Corynebacterium uterequi (isolates:1; rSTs:1)
- Corynebacterium variabile (isolates:3; rSTs:3 tree)
- Corynebacterium vitaeruminis (isolates:2; rSTs:2)
- Corynebacterium wankanglinii (isolates:3; rSTs:3 tree)
- Corynebacterium xerosis (isolates:5; rSTs:5 tree)
- Corynebacterium yonathiae (isolates:1; rSTs:1)
- Corynebacterium yudongzhengii (isolates:2; rSTs:1)
- Corynebacterium zhongnanshanii (isolates:2; rSTs:2)
- Corynebacterium (isolates:2410; rSTs:1367 tree)
- Dietziaceae (isolates:60; rSTs:43 tree)
- Dietzia (isolates:60; rSTs:43 tree)
- Dietzia aerolata (isolates:1; rSTs:1)
- Dietzia alimentaria (isolates:1; rSTs:1)
- Dietzia aurantiaca (isolates:1; rSTs:1)
- Dietzia cercidiphylli (isolates:2; rSTs:2)
- Dietzia cinnamea (isolates:3; rSTs:2)
- Dietzia kunjamensis (isolates:6; rSTs:4 tree)
- Dietzia lutea (isolates:2; rSTs:1)
- Dietzia maris (isolates:6; rSTs:4 tree)
- Dietzia natronolimnaea (isolates:1; rSTs:1)
- Dietzia papillomatosis (isolates:1; rSTs:1)
- Dietzia psychralcaliphila (isolates:4; rSTs:2)
- Dietzia sp. (isolates:30; rSTs:21 tree)
- Dietzia timorensis (isolates:2; rSTs:2)
- Dietzia (isolates:60; rSTs:43 tree)
- Gordoniaceae (isolates:200; rSTs:169 tree)
- Gordonia (isolates:196; rSTs:166 tree)
- Gordonia aichiensis (isolates:1; rSTs:1)
- Gordonia alkaliphila (isolates:1; rSTs:1)
- Gordonia alkanivorans (isolates:18; rSTs:15 tree)
- Gordonia amarae (isolates:5; rSTs:2)
- Gordonia amicalis (isolates:15; rSTs:13 tree)
- Gordonia araii (isolates:2; rSTs:1)
- Gordonia asplenii (isolates:1; rSTs:1)
- Gordonia bronchialis (isolates:6; rSTs:3 tree)
- Gordonia crocea (isolates:1; rSTs:1)
- Gordonia desulfuricans (isolates:2; rSTs:1)
- Gordonia effusa (isolates:1; rSTs:1)
- Gordonia hankookensis (isolates:1; rSTs:1)
- Gordonia hirsuta (isolates:3; rSTs:1)
- Gordonia hongkongensis (isolates:3; rSTs:3 tree)
- Gordonia humi (isolates:1; rSTs:1)
- Gordonia hydrophobica (isolates:2; rSTs:1)
- Gordonia insulae (isolates:1; rSTs:1)
- Gordonia iterans (isolates:1; rSTs:1)
- Gordonia jacobaea (isolates:2; rSTs:2)
- Gordonia jinghuaiqii (isolates:3; rSTs:2)
- Gordonia jinhuaensis (isolates:1; rSTs:1)
- Gordonia lacunae (isolates:1; rSTs:1)
- Gordonia liuliyuniae (isolates:2; rSTs:2)
- Gordonia malaquae (isolates:3; rSTs:2)
- Gordonia mangrovi (isolates:2; rSTs:1)
- Gordonia metallireducens (isolates:1; rSTs:1)
- Gordonia namibiensis (isolates:1; rSTs:1)
- Gordonia neofelifaecis (isolates:1; rSTs:1)
- Gordonia oryzae (isolates:1; rSTs:1)
- Gordonia otitidis (isolates:2; rSTs:2)
- Gordonia paraffinivorans (isolates:14; rSTs:13 tree)
- Gordonia phthalatica (isolates:1; rSTs:1)
- Gordonia polyisoprenivorans (isolates:8; rSTs:7 tree)
- Gordonia pseudamarae (isolates:2; rSTs:2)
- Gordonia rhizosphera (isolates:1; rSTs:1)
- Gordonia rubripertincta (isolates:7; rSTs:6 tree)
- Gordonia sedimidis (isolates:1; rSTs:1)
- Gordonia shandongensis (isolates:1; rSTs:1)
- Gordonia sihwensis (isolates:4; rSTs:3 tree)
- Gordonia soli (isolates:1; rSTs:1)
- Gordonia sp. (isolates:53; rSTs:50 tree)
- Gordonia spumicola (isolates:1; rSTs:1)
- Gordonia sputi (isolates:4; rSTs:3 tree)
- Gordonia tangerina (isolates:1; rSTs:1)
- Gordonia terrae (isolates:7; rSTs:4 tree)
- Gordonia westfalica (isolates:2; rSTs:2)
- Gordonia zhaorongruii (isolates:2; rSTs:2)
- Gordonia zhenghanii (isolates:1; rSTs:1)
- Jongsikchunia (isolates:1; rSTs:1)
- Jongsikchunia kroppenstedtii (isolates:1; rSTs:1)
- Millisia (isolates:1; rSTs:1)
- Millisia brevis (isolates:1; rSTs:1)
- Skermania (isolates:2; rSTs:1)
- Skermania piniformis (isolates:2; rSTs:1)
- Gordonia (isolates:196; rSTs:166 tree)
- Hoyosellaceae (isolates:9; rSTs:7 tree)
- Lawsonellaceae (isolates:3; rSTs:3 tree)
- Mycobacteriaceae (isolates:16301; rSTs:3192)
- Mycobacterium (isolates:13450; rSTs:2437)
- Candidatus Mycobacterium methanotrophicum (isolates:2; rSTs:1)
- Candidatus Mycobacterium wuenschmannii (isolates:1; rSTs:1)
- Mycobacterium adipatum (isolates:1; rSTs:1)
- Mycobacterium ahvazicum (isolates:1; rSTs:1)
- Mycobacterium alsense (isolates:4; rSTs:1)
- Mycobacterium angelicum (isolates:2; rSTs:1)
- Mycobacterium aquaticum (isolates:1; rSTs:1)
- Mycobacterium arosiense (isolates:1; rSTs:1)
- Mycobacterium asiaticum (isolates:9; rSTs:8 tree)
- Mycobacterium attenuatum (isolates:3; rSTs:3 tree)
- Mycobacterium avium (isolates:262; rSTs:92 tree)
- Mycobacterium basiliense (isolates:1; rSTs:1)
- Mycobacterium bohemicum (isolates:3; rSTs:1)
- Mycobacterium botniense (isolates:1; rSTs:1)
- Mycobacterium bouchedurhonense (isolates:2; rSTs:1)
- Mycobacterium bourgelatii (isolates:2; rSTs:1)
- Mycobacterium branderi (isolates:3; rSTs:1)
- Mycobacterium canetti (isolates:34)
- Mycobacterium canettii (isolates:1; rSTs:18 tree)
- Mycobacterium celatum (isolates:3; rSTs:1)
- Mycobacterium colombiense (isolates:5; rSTs:3 tree)
- Mycobacterium conspicuum (isolates:3; rSTs:2)
- Mycobacterium cookii (isolates:2; rSTs:1)
- Mycobacterium decipiens (isolates:1; rSTs:1)
- Mycobacterium dioxanotrophicus (isolates:1; rSTs:1)
- Mycobacterium europaeum (isolates:3; rSTs:3 tree)
- Mycobacterium florentinum (isolates:3; rSTs:1)
- Mycobacterium fragae (isolates:3; rSTs:1)
- Mycobacterium gastri (isolates:1; rSTs:1)
- Mycobacterium genavense (isolates:1; rSTs:1)
- Mycobacterium gordonae (isolates:6; rSTs:3 tree)
- Mycobacterium haemophilum (isolates:6; rSTs:2)
- Mycobacterium heckeshornense (isolates:5; rSTs:3 tree)
- Mycobacterium heidelbergense (isolates:3; rSTs:1)
- Mycobacterium helveticum (isolates:2; rSTs:1)
- Mycobacterium innocens (isolates:1; rSTs:1)
- Mycobacterium interjectum (isolates:2; rSTs:1)
- Mycobacterium intermedium (isolates:4; rSTs:1)
- Mycobacterium intracellulare (isolates:96; rSTs:44 tree)
- Mycobacterium kansasii (isolates:39; rSTs:19 tree)
- Mycobacterium kiyosense (isolates:15; rSTs:3 tree)
- Mycobacterium kubicae (isolates:8; rSTs:4 tree)
- Mycobacterium kyogaense (isolates:1; rSTs:1)
- Mycobacterium kyorinense (isolates:4; rSTs:2)
- Mycobacterium lacus (isolates:3; rSTs:1)
- Mycobacterium lehmannii (isolates:1; rSTs:1)
- Mycobacterium lentiflavum (isolates:2; rSTs:2)
- Mycobacterium leprae (isolates:13; rSTs:4 tree)
- Mycobacterium lepraemurium (isolates:1; rSTs:1)
- Mycobacterium lepromatosis (isolates:2; rSTs:2)
- Mycobacterium liflandii (isolates:2; rSTs:2)
- Mycobacterium malmoense (isolates:4; rSTs:2)
- Mycobacterium mantenii (isolates:7; rSTs:5 tree)
- Mycobacterium marinum (isolates:42; rSTs:11 tree)
- Mycobacterium marseillense (isolates:8; rSTs:6 tree)
- Mycobacterium montefiorense (isolates:10; rSTs:2)
- Mycobacterium mungi (isolates:1; rSTs:1)
- Mycobacterium nebraskense (isolates:4; rSTs:2)
- Mycobacterium neglectum (isolates:1; rSTs:1)
- Mycobacterium neumannii (isolates:1; rSTs:1)
- Mycobacterium noviomagense (isolates:3; rSTs:1)
- Mycobacterium novum (isolates:1; rSTs:1)
- Mycobacterium numidiamassiliense (isolates:1; rSTs:1)
- Mycobacterium orygis (isolates:4; rSTs:2)
- Mycobacterium ostraviense (isolates:3; rSTs:2)
- Mycobacterium palustre (isolates:2; rSTs:1)
- Mycobacterium paraense (isolates:5; rSTs:3 tree)
- Mycobacterium paraffinicum (isolates:1; rSTs:1)
- Mycobacterium paragordonae (isolates:7; rSTs:5 tree)
- Mycobacterium paraintracellulare (isolates:14; rSTs:11 tree)
- Mycobacterium parascrofulaceum (isolates:1; rSTs:1)
- Mycobacterium paraseoulense (isolates:3; rSTs:2)
- Mycobacterium paraterrae (isolates:1; rSTs:1)
- Mycobacterium parmense (isolates:3; rSTs:1)
- Mycobacterium persicum (isolates:9; rSTs:9 tree)
- Mycobacterium pseudokansasii (isolates:3; rSTs:2)
- Mycobacterium pseudoshottsii (isolates:6; rSTs:3 tree)
- Mycobacterium rhizamassiliense (isolates:1; rSTs:1)
- Mycobacterium riyadhense (isolates:11; rSTs:6 tree)
- Mycobacterium saskatchewanense (isolates:2; rSTs:1)
- Mycobacterium scrofulaceum (isolates:1; rSTs:1)
- Mycobacterium senriense (isolates:1; rSTs:1)
- Mycobacterium seoulense (isolates:2; rSTs:1)
- Mycobacterium sherrisii (isolates:4; rSTs:4 tree)
- Mycobacterium shigaense (isolates:4; rSTs:3 tree)
- Mycobacterium shimoidei (isolates:4; rSTs:2)
- Mycobacterium shinjukuense (isolates:3; rSTs:2)
- Mycobacterium shottsii (isolates:2; rSTs:1)
- Mycobacterium simiae (isolates:5; rSTs:4 tree)
- Mycobacterium simulans (isolates:2; rSTs:2)
- Mycobacterium sp. (isolates:97; rSTs:136 tree)
- Mycobacterium spongiae (isolates:1; rSTs:1)
- Mycobacterium stomatepiae (isolates:1; rSTs:1)
- Mycobacterium syngnathidarum (isolates:2; rSTs:2)
- Mycobacterium szulgai (isolates:2; rSTs:1)
- Mycobacterium talmoniae (isolates:2; rSTs:1)
- Mycobacterium terramassiliense (isolates:1; rSTs:1)
- Mycobacterium tilburgii (isolates:1; rSTs:1)
- Mycobacterium timonense (isolates:1; rSTs:1)
- Mycobacterium triplex (isolates:2; rSTs:1)
- Mycobacterium tuberculosis (isolates:12234; rSTs:1910)
- Mycobacterium uberis (isolates:1; rSTs:1)
- Mycobacterium ulcerans (isolates:333; rSTs:15 tree)
- Mycobacterium vicinigordonae (isolates:1; rSTs:1)
- Mycobacterium xenopi (isolates:7; rSTs:6 tree)
- Mycobacterium yunnanensis (isolates:1; rSTs:1)
- Mycobacteroides (isolates:2298; rSTs:457 tree)
- Mycobacteroides abscessus (isolates:2176; rSTs:406 tree)
- Mycobacteroides chelonae (isolates:60; rSTs:29 tree)
- Mycobacteroides franklinii (isolates:12; rSTs:5 tree)
- Mycobacteroides immunogenum (isolates:19; rSTs:4 tree)
- Mycobacteroides salmoniphilum (isolates:10; rSTs:7 tree)
- Mycobacteroides saopaulense (isolates:4; rSTs:3 tree)
- Mycobacteroides sp. (isolates:16; rSTs:2)
- [Mycobacterium] stephanolepidis (isolates:1; rSTs:1)
- Mycolicibacillus (isolates:8; rSTs:4 tree)
- Mycolicibacter (isolates:35; rSTs:32 tree)
- Mycolicibacter acidiphilus (isolates:1; rSTs:1)
- Mycolicibacter algericus (isolates:3; rSTs:1)
- Mycolicibacter arupensis (isolates:4; rSTs:3 tree)
- Mycolicibacter engbaekii (isolates:1; rSTs:1)
- Mycolicibacter heraklionensis (isolates:2; rSTs:2)
- Mycolicibacter hiberniae (isolates:3; rSTs:1)
- Mycolicibacter icosiumassiliensis (isolates:1; rSTs:1)
- Mycolicibacter kumamotonensis (isolates:3; rSTs:3 tree)
- Mycolicibacter longobardus (isolates:2; rSTs:2)
- Mycolicibacter minnesotensis (isolates:3; rSTs:1)
- Mycolicibacter nonchromogenicus (isolates:1; rSTs:1)
- Mycolicibacter senuensis (isolates:2; rSTs:1)
- Mycolicibacter sinensis (isolates:1; rSTs:1)
- Mycolicibacter sp. (isolates:2; rSTs:10 tree)
- Mycolicibacter terrae (isolates:4; rSTs:1)
- Mycolicibacter virginiensis (isolates:2; rSTs:2)
- Mycolicibacterium (isolates:510; rSTs:262 tree)
- Candidatus Mycolicibacterium alkanivorans (isolates:1; rSTs:1)
- Mycobacterium pinniadriaticum (isolates:2; rSTs:1)
- Mycolicibacterium acapulense (isolates:4; rSTs:4 tree)
- Mycolicibacterium agri (isolates:2; rSTs:2)
- Mycolicibacterium aichiense (isolates:3; rSTs:1)
- Mycolicibacterium alvei (isolates:2; rSTs:1)
- Mycolicibacterium anyangense (isolates:1; rSTs:1)
- Mycolicibacterium arabiense (isolates:2; rSTs:1)
- Mycolicibacterium aromaticivorans (isolates:1; rSTs:1)
- Mycolicibacterium arseniciresistens (isolates:1)
- Mycolicibacterium aubagnense (isolates:2; rSTs:1)
- Mycolicibacterium aurantiacum (isolates:1; rSTs:1)
- Mycolicibacterium aurum (isolates:3; rSTs:1)
- Mycolicibacterium austroafricanum (isolates:2; rSTs:1)
- Mycolicibacterium bacteremicum (isolates:2; rSTs:1)
- Mycolicibacterium baixiangningiae (isolates:3; rSTs:2)
- Mycolicibacterium boenickei (isolates:4; rSTs:1)
- Mycolicibacterium brisbanense (isolates:2; rSTs:1)
- Mycolicibacterium brumae (isolates:5; rSTs:1)
- Mycolicibacterium canariasense (isolates:3; rSTs:1)
- Mycolicibacterium celeriflavum (isolates:4; rSTs:2)
- Mycolicibacterium chitae (isolates:3; rSTs:1)
- Mycolicibacterium chlorophenolicum (isolates:2; rSTs:1)
- Mycolicibacterium chubuense (isolates:3; rSTs:1)
- Mycolicibacterium conceptionense (isolates:8; rSTs:5 tree)
- Mycolicibacterium confluentis (isolates:3; rSTs:1)
- Mycolicibacterium cosmeticum (isolates:2; rSTs:1)
- Mycolicibacterium crocinum (isolates:2; rSTs:1)
- Mycolicibacterium diernhoferi (isolates:5; rSTs:2)
- Mycolicibacterium doricum (isolates:3; rSTs:2)
- Mycolicibacterium duvalii (isolates:3; rSTs:1)
- Mycolicibacterium elephantis (isolates:7; rSTs:3 tree)
- Mycolicibacterium fallax (isolates:3; rSTs:1)
- Mycolicibacterium farcinogenes (isolates:1; rSTs:1)
- Mycolicibacterium flavescens (isolates:2; rSTs:1)
- Mycolicibacterium fluoranthenivorans (isolates:4; rSTs:3 tree)
- Mycolicibacterium fortuitum (isolates:55; rSTs:26 tree)
- Mycolicibacterium frederiksbergense (isolates:4; rSTs:4 tree)
- Mycolicibacterium gadium (isolates:2; rSTs:2)
- Mycolicibacterium gilvum (isolates:4; rSTs:3 tree)
- Mycolicibacterium goodii (isolates:8; rSTs:7 tree)
- Mycolicibacterium grossiae (isolates:2)
- Mycolicibacterium hassiacum (isolates:4; rSTs:1)
- Mycolicibacterium helvum (isolates:1; rSTs:1)
- Mycolicibacterium hippocampi (isolates:2; rSTs:1)
- Mycolicibacterium hodleri (isolates:3; rSTs:3 tree)
- Mycolicibacterium holsaticum (isolates:4; rSTs:2)
- Mycolicibacterium houstonense (isolates:2; rSTs:1)
- Mycolicibacterium insubricum (isolates:3; rSTs:1)
- Mycolicibacterium iranicum (isolates:4; rSTs:4 tree)
- Mycolicibacterium komanii (isolates:1; rSTs:1)
- Mycolicibacterium komossense (isolates:1; rSTs:1)
- Mycolicibacterium lacusdiani (isolates:1; rSTs:1)
- Mycolicibacterium litorale (isolates:4; rSTs:2)
- Mycolicibacterium llatzerense (isolates:4; rSTs:4 tree)
- Mycolicibacterium lutetiense (isolates:1; rSTs:1)
- Mycolicibacterium madagascariense (isolates:2; rSTs:1)
- Mycolicibacterium mageritense (isolates:4; rSTs:2)
- Mycolicibacterium malmesburyense (isolates:1; rSTs:1)
- Mycolicibacterium mengxianglii (isolates:2; rSTs:2)
- Mycolicibacterium monacense (isolates:6; rSTs:3 tree)
- Mycolicibacterium moriokaense (isolates:4; rSTs:2)
- Mycolicibacterium mucogenicum (isolates:4; rSTs:2)
- Mycolicibacterium murale (isolates:2; rSTs:1)
- Mycolicibacterium neoaurum (isolates:12; rSTs:5 tree)
- Mycolicibacterium neworleansense (isolates:2; rSTs:2)
- Mycolicibacterium nivoides (isolates:1; rSTs:1)
- Mycolicibacterium novocastrense (isolates:5; rSTs:2)
- Mycolicibacterium obuense (isolates:3; rSTs:3 tree)
- Mycolicibacterium palauense (isolates:1)
- Mycolicibacterium pallens (isolates:1; rSTs:1)
- Mycolicibacterium parafortuitum (isolates:3; rSTs:2)
- Mycolicibacterium peregrinum (isolates:9; rSTs:6 tree)
- Mycolicibacterium phlei (isolates:10; rSTs:4 tree)
- Mycolicibacterium phocaicum (isolates:3; rSTs:2)
- Mycolicibacterium porcinum (isolates:6; rSTs:4 tree)
- Mycolicibacterium poriferae (isolates:2; rSTs:1)
- Mycolicibacterium psychrotolerans (isolates:2; rSTs:1)
- Mycolicibacterium pulveris (isolates:2; rSTs:1)
- Mycolicibacterium pyrenivorans (isolates:1; rSTs:1)
- Mycolicibacterium rhodesiae (isolates:2; rSTs:1)
- Mycolicibacterium rufum (isolates:3; rSTs:1)
- Mycolicibacterium rutilum (isolates:1; rSTs:1)
- Mycolicibacterium sarraceniae (isolates:1; rSTs:1)
- Mycolicibacterium sediminis (isolates:2; rSTs:1)
- Mycolicibacterium senegalense (isolates:2; rSTs:1)
- Mycolicibacterium septicum (isolates:5; rSTs:5 tree)
- Mycolicibacterium setense (isolates:5; rSTs:2)
- Mycolicibacterium smegmatis (isolates:111; rSTs:19 tree)
- Mycolicibacterium sp. (isolates:54; rSTs:46 tree)
- Mycolicibacterium sphagni (isolates:1; rSTs:1)
- Mycolicibacterium stellerae (isolates:1; rSTs:1)
- Mycolicibacterium thermoresistibile (isolates:4; rSTs:1)
- Mycolicibacterium tokaiense (isolates:2; rSTs:1)
- Mycolicibacterium tusciae (isolates:1; rSTs:1)
- Mycolicibacterium vaccae (isolates:3; rSTs:1)
- Mycolicibacterium vanbaalenii (isolates:5; rSTs:4 tree)
- Mycolicibacterium vinylchloridicum (isolates:1; rSTs:1)
- Mycolicibacterium vulneris (isolates:1; rSTs:1)
- Mycolicibacterium wolinskyi (isolates:3; rSTs:2)
- Mycolicibacterium xanthum (isolates:1; rSTs:1)
- [Mycobacterium] fortunisiensis (isolates:1; rSTs:1)
- [Mycobacterium] manitobense (isolates:1; rSTs:1)
- Mycobacterium (isolates:13450; rSTs:2437)
- Nocardiaceae (isolates:1508; rSTs:895 tree)
- Aldersonia (isolates:2; rSTs:2)
- Antrihabitans (isolates:3; rSTs:3 tree)
- Nocardia (isolates:454; rSTs:318 tree)
- Nocardia abscessus (isolates:13; rSTs:6 tree)
- Nocardia acididurans (isolates:1; rSTs:1)
- Nocardia acidivorans (isolates:1; rSTs:1)
- Nocardia africana (isolates:3; rSTs:1)
- Nocardia alba (isolates:2; rSTs:1)
- Nocardia albiluteola (isolates:1; rSTs:1)
- Nocardia alni (isolates:1; rSTs:1)
- Nocardia altamirensis (isolates:1; rSTs:1)
- Nocardia amamiensis (isolates:2; rSTs:2)
- Nocardia amikacinitolerans (isolates:6; rSTs:5 tree)
- Nocardia anaemiae (isolates:1; rSTs:1)
- Nocardia aobensis (isolates:1; rSTs:1)
- Nocardia araoensis (isolates:1; rSTs:1)
- Nocardia arizonensis (isolates:2; rSTs:1)
- Nocardia arthritidis (isolates:1; rSTs:1)
- Nocardia asiatica (isolates:4; rSTs:3 tree)
- Nocardia asteroides (isolates:5; rSTs:1)
- Nocardia aurantia (isolates:1; rSTs:1)
- Nocardia aurantiaca (isolates:1; rSTs:1)
- Nocardia aurea (isolates:1; rSTs:1)
- Nocardia australiensis (isolates:1; rSTs:1)
- Nocardia barduliensis (isolates:1; rSTs:1)
- Nocardia beijingensis (isolates:2; rSTs:2)
- Nocardia bhagyanarayanae (isolates:1; rSTs:1)
- Nocardia blacklockiae (isolates:1; rSTs:1)
- Nocardia bovistercoris (isolates:1; rSTs:1)
- Nocardia brasiliensis (isolates:17; rSTs:10 tree)
- Nocardia brevicatena (isolates:1; rSTs:1)
- Nocardia caishijiensis (isolates:2; rSTs:1)
- Nocardia camponoti (isolates:1; rSTs:1)
- Nocardia canadensis (isolates:1; rSTs:1)
- Nocardia carnea (isolates:2; rSTs:1)
- Nocardia cerradoensis (isolates:3; rSTs:2)
- Nocardia coffeae (isolates:1; rSTs:1)
- Nocardia colli (isolates:1; rSTs:1)
- Nocardia concava (isolates:1; rSTs:1)
- Nocardia coubleae (isolates:2; rSTs:1)
- Nocardia crassostreae (isolates:1; rSTs:1)
- Nocardia cyriacigeorgica (isolates:81; rSTs:50 tree)
- Nocardia donostiensis (isolates:3; rSTs:2)
- Nocardia elegans (isolates:2; rSTs:2)
- Nocardia exalbida (isolates:1; rSTs:1)
- Nocardia farcinica (isolates:64; rSTs:46 tree)
- Nocardia flavorosea (isolates:3; rSTs:2)
- Nocardia fluminea (isolates:1; rSTs:1)
- Nocardia fusca (isolates:1; rSTs:1)
- Nocardia gamkensis (isolates:3; rSTs:1)
- Nocardia gipuzkoensis (isolates:4; rSTs:3 tree)
- Nocardia goodfellowii (isolates:1; rSTs:1)
- Nocardia grenadensis (isolates:1; rSTs:1)
- Nocardia harenae (isolates:1; rSTs:1)
- Nocardia higoensis (isolates:1; rSTs:1)
- Nocardia huaxiensis (isolates:2; rSTs:2)
- Nocardia ignorata (isolates:2; rSTs:1)
- Nocardia inohanensis (isolates:1; rSTs:1)
- Nocardia iowensis (isolates:1; rSTs:1)
- Nocardia jejuensis (isolates:1; rSTs:1)
- Nocardia jiangxiensis (isolates:1; rSTs:1)
- Nocardia jinanensis (isolates:3; rSTs:1)
- Nocardia kruczakiae (isolates:2; rSTs:2)
- Nocardia lijiangensis (isolates:1; rSTs:1)
- Nocardia macrotermitis (isolates:1; rSTs:1)
- Nocardia mangyaensis (isolates:2; rSTs:2)
- Nocardia mexicana (isolates:2; rSTs:1)
- Nocardia mikamii (isolates:1; rSTs:1)
- Nocardia miyunensis (isolates:1; rSTs:1)
- Nocardia neocaledoniensis (isolates:5; rSTs:3 tree)
- Nocardia niigatensis (isolates:1; rSTs:1)
- Nocardia ninae (isolates:1; rSTs:1)
- Nocardia niwae (isolates:1; rSTs:1)
- Nocardia noduli (isolates:1; rSTs:1)
- Nocardia nova (isolates:8; rSTs:8 tree)
- Nocardia otitidiscaviarum (isolates:10; rSTs:7 tree)
- Nocardia panacis (isolates:1; rSTs:1)
- Nocardia paucivorans (isolates:1; rSTs:1)
- Nocardia pneumoniae (isolates:1; rSTs:1)
- Nocardia pseudobrasiliensis (isolates:3; rSTs:1)
- Nocardia pseudovaccinii (isolates:1; rSTs:1)
- Nocardia pulmonis (isolates:1; rSTs:1)
- Nocardia puris (isolates:6; rSTs:3)
- Nocardia rhamnosiphila (isolates:3; rSTs:1)
- Nocardia rhizosphaerihabitans (isolates:1; rSTs:1)
- Nocardia rosealba (isolates:1; rSTs:1)
- Nocardia salmonicida (isolates:3; rSTs:3 tree)
- Nocardia seriolae (isolates:24; rSTs:10 tree)
- Nocardia shimofusensis (isolates:1; rSTs:1)
- Nocardia sienata (isolates:1; rSTs:1)
- Nocardia sp. (isolates:42; rSTs:40 tree)
- Nocardia speluncae (isolates:2; rSTs:1)
- Nocardia spumae (isolates:1; rSTs:1)
- Nocardia sputi (isolates:2; rSTs:2)
- Nocardia sputorum (isolates:2; rSTs:2)
- Nocardia stercoris (isolates:1; rSTs:1)
- Nocardia suismassiliense (isolates:1; rSTs:1)
- Nocardia takedensis (isolates:1; rSTs:1)
- Nocardia tenerifensis (isolates:2; rSTs:1)
- Nocardia tengchongensis (isolates:1; rSTs:1)
- Nocardia terpenica (isolates:11; rSTs:4 tree)
- Nocardia terrae (isolates:1; rSTs:1)
- Nocardia testacea (isolates:1; rSTs:1)
- Nocardia thailandica (isolates:1; rSTs:1)
- Nocardia transvalensis (isolates:2; rSTs:1)
- Nocardia uniformis (isolates:2; rSTs:1)
- Nocardia vaccinii (isolates:1; rSTs:1)
- Nocardia vermiculata (isolates:2; rSTs:1)
- Nocardia veterana (isolates:2; rSTs:1)
- Nocardia vinacea (isolates:3; rSTs:3)
- Nocardia violaceofusca (isolates:1; rSTs:1)
- Nocardia vulneris (isolates:2; rSTs:1)
- Nocardia wallacei (isolates:14; rSTs:6 tree)
- Nocardia xishanensis (isolates:1; rSTs:1)
- Nocardia yamanashiensis (isolates:2; rSTs:2)
- Nocardia yunnanensis (isolates:1; rSTs:1)
- Prescottella (isolates:217; rSTs:101 tree)
- Rhodococcus (isolates:810; rSTs:450 tree)
- Rhodococcus aetherivorans (isolates:12; rSTs:11 tree)
- Rhodococcus baikonurensis (isolates:1)
- Rhodococcus cerastii (isolates:1; rSTs:1)
- Rhodococcus cercidiphylli (isolates:1; rSTs:1)
- Rhodococcus coprophilus (isolates:3; rSTs:1)
- Rhodococcus corynebacterioides (isolates:7; rSTs:6 tree)
- Rhodococcus erythropolis (isolates:36; rSTs:25 tree)
- Rhodococcus fascians (isolates:189; rSTs:43 tree)
- Rhodococcus globerulus (isolates:7; rSTs:5 tree)
- Rhodococcus gordoniae (isolates:3; rSTs:2)
- Rhodococcus indonesiensis (isolates:1)
- Rhodococcus jostii (isolates:2; rSTs:1)
- Rhodococcus koreensis (isolates:4; rSTs:2)
- Rhodococcus kroppenstedtii (isolates:10; rSTs:7 tree)
- Rhodococcus kyotonensis (isolates:2; rSTs:2)
- Rhodococcus maanshanensis (isolates:2; rSTs:1)
- Rhodococcus marinonascens (isolates:1; rSTs:1)
- Rhodococcus opacus (isolates:30; rSTs:22 tree)
- Rhodococcus oryzae (isolates:1; rSTs:1)
- Rhodococcus oxybenzonivorans (isolates:7; rSTs:4 tree)
- Rhodococcus phenolicus (isolates:2; rSTs:1)
- Rhodococcus pseudokoreensis (isolates:1; rSTs:1)
- Rhodococcus pyridinivorans (isolates:29; rSTs:22 tree)
- Rhodococcus qingshengii (isolates:49; rSTs:40 tree)
- Rhodococcus rhodnii (isolates:3; rSTs:1)
- Rhodococcus rhodochrous (isolates:19; rSTs:11 tree)
- Rhodococcus ruber (isolates:29; rSTs:19 tree)
- Rhodococcus sp. (isolates:339; rSTs:207 tree)
- Rhodococcus spelaei (isolates:1; rSTs:1)
- Rhodococcus spongiicola (isolates:1; rSTs:1)
- Rhodococcus triatomae (isolates:4; rSTs:1)
- Rhodococcus trifolii (isolates:1; rSTs:1)
- Rhodococcus tukisamuensis (isolates:2; rSTs:1)
- Rhodococcus wratislaviensis (isolates:3; rSTs:2)
- Rhodococcus xishaensis (isolates:1; rSTs:1)
- Rhodococcus yananensis (isolates:1; rSTs:1)
- Rhodococcus yunnanensis (isolates:1; rSTs:1)
- Rhodococcus zopfii (isolates:4; rSTs:2)
- Smaragdicoccus (isolates:2; rSTs:1)
- Smaragdicoccus niigatensis (isolates:2; rSTs:1)
- Spelaeibacter (isolates:1; rSTs:1)
- Spelaeibacter cavernicola (isolates:1; rSTs:1)
- Williamsia (isolates:19; rSTs:19 tree)
- Williamsia deligens (isolates:1; rSTs:1)
- Williamsia faeni (isolates:1; rSTs:1)
- Williamsia herbipolensis (isolates:2; rSTs:2)
- Williamsia limnetica (isolates:1; rSTs:1)
- Williamsia marianensis (isolates:1; rSTs:1)
- Williamsia maris (isolates:1; rSTs:1)
- Williamsia muralis (isolates:2; rSTs:1)
- Williamsia phyllosphaerae (isolates:1; rSTs:1)
- Williamsia serinedens (isolates:1; rSTs:1)
- Williamsia soli (isolates:1; rSTs:1)
- Williamsia sp. (isolates:6; rSTs:7 tree)
- Williamsia sterculiae (isolates:1; rSTs:1)
- Segniliparaceae (isolates:4; rSTs:2)
- Tsukamurellaceae (isolates:35; rSTs:26 tree)
- Tsukamurella (isolates:35; rSTs:26 tree)
- Tsukamurella asaccharolytica (isolates:1; rSTs:1)
- Tsukamurella conjunctivitidis (isolates:1; rSTs:1)
- Tsukamurella ocularis (isolates:3; rSTs:2)
- Tsukamurella paurometabola (isolates:2; rSTs:2)
- Tsukamurella pseudospumae (isolates:2; rSTs:2)
- Tsukamurella pulmonis (isolates:6; rSTs:3 tree)
- Tsukamurella sp. (isolates:7; rSTs:6 tree)
- Tsukamurella spumae (isolates:1; rSTs:1)
- Tsukamurella strandjordii (isolates:1; rSTs:1)
- Tsukamurella tyrosinosolvens (isolates:11; rSTs:7 tree)
- Tsukamurella (isolates:35; rSTs:26 tree)
- Corynebacteriaceae (isolates:2410; rSTs:1367 tree)
- Nakamurellales (isolates:13; rSTs:13 tree)
- Nakamurellaceae (isolates:13; rSTs:13 tree)
- Nakamurella (isolates:13; rSTs:13 tree)
- Nakamurella aerolata (isolates:1; rSTs:1)
- Nakamurella alba (isolates:1; rSTs:1)
- Nakamurella antarctica (isolates:1; rSTs:1)
- Nakamurella deserti (isolates:1; rSTs:1)
- Nakamurella endophytica (isolates:1; rSTs:1)
- Nakamurella flava (isolates:1; rSTs:1)
- Nakamurella flavida (isolates:2; rSTs:1)
- Nakamurella lactea (isolates:1; rSTs:1)
- Nakamurella leprariae (isolates:1; rSTs:1)
- Nakamurella multipartita (isolates:1; rSTs:1)
- Nakamurella panacisegetis (isolates:1; rSTs:1)
- Nakamurella sp. (isolates:1; rSTs:2 tree)
- Nakamurella (isolates:13; rSTs:13 tree)
- Nakamurellaceae (isolates:13; rSTs:13 tree)
- Propionibacteriales (isolates:1210; rSTs:835 tree)
- Actinopolymorphaceae (isolates:6; rSTs:5 tree)
- Kribbellaceae (isolates:46; rSTs:42 tree)
- Kribbella (isolates:46; rSTs:42 tree)
- Kribbella albertanoniae (isolates:1; rSTs:1)
- Kribbella aluminosa (isolates:1; rSTs:1)
- Kribbella amoyensis (isolates:1; rSTs:1)
- Kribbella antibiotica (isolates:1; rSTs:1)
- Kribbella antiqua (isolates:1; rSTs:1)
- Kribbella capetownensis (isolates:1; rSTs:1)
- Kribbella catacumbae (isolates:1; rSTs:1)
- Kribbella flavida (isolates:1; rSTs:1)
- Kribbella italica (isolates:1; rSTs:1)
- Kribbella jejuensis (isolates:1; rSTs:1)
- Kribbella jiaozuonensis (isolates:1; rSTs:1)
- Kribbella kalugense (isolates:1; rSTs:1)
- Kribbella monticola (isolates:1; rSTs:1)
- Kribbella orskensis (isolates:1; rSTs:1)
- Kribbella pittospori (isolates:1; rSTs:1)
- Kribbella pratensis (isolates:2; rSTs:2)
- Kribbella qitaiheensis (isolates:1; rSTs:1)
- Kribbella rubisoli (isolates:1; rSTs:1)
- Kribbella sandramycini (isolates:2; rSTs:1)
- Kribbella shirazensis (isolates:1; rSTs:1)
- Kribbella sindirgiensis (isolates:1; rSTs:1)
- Kribbella solani (isolates:2; rSTs:1)
- Kribbella soli (isolates:1; rSTs:1)
- Kribbella sp. (isolates:15; rSTs:13 tree)
- Kribbella speibonae (isolates:2; rSTs:2)
- Kribbella steppae (isolates:1; rSTs:1)
- Kribbella turkmenica (isolates:1; rSTs:1)
- Kribbella voronezhensis (isolates:1; rSTs:1)
- Kribbella (isolates:46; rSTs:42 tree)
- Nocardioidaceae (isolates:349; rSTs:294 tree)
- Aeromicrobium (isolates:57; rSTs:44 tree)
- Aeromicrobium camelliae (isolates:1; rSTs:1)
- Aeromicrobium chenweiae (isolates:2; rSTs:1)
- Aeromicrobium choanae (isolates:1; rSTs:1)
- Aeromicrobium duanguangcaii (isolates:2; rSTs:2)
- Aeromicrobium endophyticum (isolates:1; rSTs:1)
- Aeromicrobium erythreum (isolates:1; rSTs:1)
- Aeromicrobium fastidiosum (isolates:2; rSTs:1)
- Aeromicrobium flavum (isolates:1; rSTs:1)
- Aeromicrobium ginsengisoli (isolates:1; rSTs:1)
- Aeromicrobium marinum (isolates:1; rSTs:1)
- Aeromicrobium massiliense (isolates:2; rSTs:1)
- Aeromicrobium panaciterrae (isolates:1; rSTs:1)
- Aeromicrobium phoceense (isolates:1; rSTs:1)
- Aeromicrobium phragmitis (isolates:1; rSTs:1)
- Aeromicrobium piscarium (isolates:1; rSTs:1)
- Aeromicrobium senzhongii (isolates:3; rSTs:2)
- Aeromicrobium sp. (isolates:26; rSTs:19 tree)
- Aeromicrobium stalagmiti (isolates:1; rSTs:1)
- Aeromicrobium tamlense (isolates:2; rSTs:1)
- Aeromicrobium terrae (isolates:1; rSTs:1)
- Aeromicrobium wangtongii (isolates:3; rSTs:2)
- Aeromicrobium yanjiei (isolates:2; rSTs:2)
- Friedmanniella (isolates:1; rSTs:1)
- Friedmanniella luteola (isolates:1; rSTs:1)
- Marmoricola (isolates:4; rSTs:4 tree)
- Micropruina (isolates:2; rSTs:2)
- Mumia (isolates:10; rSTs:9 tree)
- Nocardioides (isolates:262; rSTs:226 tree)
- Nocardioides acrostichi (isolates:1; rSTs:1)
- Nocardioides aequoreus (isolates:1; rSTs:1)
- Nocardioides agariphilus (isolates:1; rSTs:1)
- Nocardioides albertanoniae (isolates:1; rSTs:1)
- Nocardioides albidus (isolates:1; rSTs:1)
- Nocardioides albus (isolates:2; rSTs:1)
- Nocardioides alcanivorans (isolates:1; rSTs:1)
- Nocardioides alkalitolerans (isolates:1; rSTs:1)
- Nocardioides alpinus (isolates:3; rSTs:1)
- Nocardioides anomalus (isolates:1; rSTs:1)
- Nocardioides antri (isolates:1; rSTs:1)
- Nocardioides aquaticus (isolates:1; rSTs:1)
- Nocardioides aromaticivorans (isolates:3; rSTs:2)
- Nocardioides astragali (isolates:1; rSTs:1)
- Nocardioides aurantiacus (isolates:1; rSTs:1)
- Nocardioides baculatus (isolates:1; rSTs:1)
- Nocardioides baekrokdamisoli (isolates:1; rSTs:1)
- Nocardioides bruguierae (isolates:2; rSTs:2)
- Nocardioides caeni (isolates:1; rSTs:1)
- Nocardioides caldifontis (isolates:1; rSTs:1)
- Nocardioides campestrisoli (isolates:2; rSTs:2)
- Nocardioides carbamazepini (isolates:1; rSTs:1)
- Nocardioides cavernae (isolates:1; rSTs:1)
- Nocardioides cavernaquae (isolates:1; rSTs:1)
- Nocardioides coralli (isolates:1; rSTs:1)
- Nocardioides cremeus (isolates:1; rSTs:1)
- Nocardioides currus (isolates:1; rSTs:1)
- Nocardioides cynanchi (isolates:1; rSTs:1)
- Nocardioides daedukensis (isolates:1; rSTs:1)
- Nocardioides daeguensis (isolates:2; rSTs:1)
- Nocardioides daejeonensis (isolates:1; rSTs:1)
- Nocardioides daphniae (isolates:2; rSTs:2)
- Nocardioides deserti (isolates:2; rSTs:1)
- Nocardioides dokdonensis (isolates:1; rSTs:1)
- Nocardioides donggukensis (isolates:1; rSTs:1)
- Nocardioides dongkuii (isolates:2; rSTs:2)
- Nocardioides dongxiaopingii (isolates:1; rSTs:1)
- Nocardioides eburneiflavus (isolates:1; rSTs:1)
- Nocardioides euryhalodurans (isolates:1; rSTs:1)
- Nocardioides exalbidus (isolates:1; rSTs:1)
- Nocardioides faecalis (isolates:3; rSTs:2)
- Nocardioides ferulae (isolates:1; rSTs:1)
- Nocardioides flavescens (isolates:1; rSTs:1)
- Nocardioides flavus (ex Wang et al. 2016) (isolates:1)
- Nocardioides furvisabuli (isolates:1; rSTs:1)
- Nocardioides ganghwensis (isolates:1; rSTs:1)
- Nocardioides gansuensis (isolates:1; rSTs:1)
- Nocardioides gilvus (isolates:1; rSTs:1)
- Nocardioides ginsengisegetis (isolates:1; rSTs:1)
- Nocardioides glacieisoli (isolates:1; rSTs:1)
- Nocardioides guangzhouensis (isolates:1; rSTs:1)
- Nocardioides halotolerans (isolates:1; rSTs:1)
- Nocardioides houyundeii (isolates:2; rSTs:2)
- Nocardioides humi (isolates:1; rSTs:1)
- Nocardioides humilatus (isolates:1; rSTs:1)
- Nocardioides hwasunensis (isolates:1; rSTs:1)
- Nocardioides immobilis (isolates:1; rSTs:1)
- Nocardioides insulae (isolates:1; rSTs:1)
- Nocardioides iriomotensis (isolates:1; rSTs:1)
- Nocardioides islandensis (isolates:1; rSTs:1)
- Nocardioides jejuensis (isolates:1; rSTs:1)
- Nocardioides jensenii (isolates:2; rSTs:1)
- Nocardioides jiangsuensis (isolates:1; rSTs:1)
- Nocardioides jiangxiensis (isolates:1)
- Nocardioides jishulii (isolates:2; rSTs:1)
- Nocardioides kongjuensis (isolates:1; rSTs:1)
- Nocardioides kribbensis (isolates:1; rSTs:1)
- Nocardioides lacusdianchii (isolates:1; rSTs:1)
- Nocardioides lianchengensis (isolates:2; rSTs:1)
- Nocardioides lijunqiniae (isolates:2; rSTs:2)
- Nocardioides limicola (isolates:1)
- Nocardioides litoris (isolates:1; rSTs:1)
- Nocardioides luteus (isolates:3; rSTs:1)
- Nocardioides luti (isolates:1; rSTs:1)
- Nocardioides malaquae (isolates:1; rSTs:1)
- Nocardioides mangrovi (isolates:1; rSTs:1)
- Nocardioides mangrovicus (isolates:1; rSTs:1)
- Nocardioides marinisabuli (isolates:2; rSTs:1)
- Nocardioides marinus (isolates:1; rSTs:1)
- Nocardioides marmoribigeumensis (isolates:1; rSTs:1)
- Nocardioides marmoriginsengisoli (isolates:1; rSTs:1)
- Nocardioides marmorisolisilvae (isolates:1; rSTs:1)
- Nocardioides marmotae (isolates:4; rSTs:3 tree)
- Nocardioides massiliensis (isolates:2; rSTs:1)
- Nocardioides mesophilus (isolates:1; rSTs:1)
- Nocardioides nematodiphilus (isolates:1; rSTs:1)
- Nocardioides nitrophenolicus (isolates:2; rSTs:1)
- Nocardioides oceani (isolates:1; rSTs:1)
- Nocardioides ochotonae (isolates:2; rSTs:2)
- Nocardioides okcheonensis (isolates:1; rSTs:1)
- Nocardioides oleivorans (isolates:1; rSTs:1)
- Nocardioides palaemonis (isolates:1; rSTs:1)
- Nocardioides panacis (isolates:1; rSTs:1)
- Nocardioides panacisoli (isolates:1; rSTs:1)
- Nocardioides panaciterrulae (isolates:1; rSTs:1)
- Nocardioides pantholopis (isolates:2; rSTs:2)
- Nocardioides panzhihuensis (isolates:1; rSTs:1)
- Nocardioides pelophilus (isolates:1; rSTs:1)
- Nocardioides perillae (isolates:1; rSTs:1)
- Nocardioides phosphati (isolates:1; rSTs:1)
- Nocardioides pini (isolates:1; rSTs:1)
- Nocardioides pinisoli (isolates:1; rSTs:1)
- Nocardioides piscis (isolates:1; rSTs:1)
- Nocardioides plantarum (isolates:1; rSTs:1)
- Nocardioides pocheonensis (isolates:1; rSTs:1)
- Nocardioides potassii (isolates:1; rSTs:1)
- Nocardioides psychrotolerans (isolates:2; rSTs:1)
- Nocardioides pyridinolyticus (isolates:1)
- Nocardioides rotundus (isolates:1; rSTs:1)
- Nocardioides rubriscoriae (isolates:1; rSTs:1)
- Nocardioides salarius (isolates:3; rSTs:1)
- Nocardioides sambongensis (isolates:1; rSTs:1)
- Nocardioides scoriae (isolates:1; rSTs:1)
- Nocardioides seonyuensis (isolates:1; rSTs:1)
- Nocardioides silvaticus (isolates:1; rSTs:1)
- Nocardioides soli (isolates:1; rSTs:1)
- Nocardioides solisilvae (isolates:1; rSTs:1)
- Nocardioides sp. (isolates:102; rSTs:92 tree)
- Nocardioides speluncae (isolates:1; rSTs:1)
- Nocardioides stalactiti (isolates:1; rSTs:1)
- Nocardioides szechwanensis (isolates:2; rSTs:1)
- Nocardioides terrae (isolates:1; rSTs:1)
- Nocardioides thalensis (isolates:1; rSTs:1)
- Nocardioides turkmenicus (isolates:1)
- Nocardioides ungokensis (isolates:1; rSTs:1)
- Nocardioides yefusunii (isolates:2; rSTs:1)
- Nocardioides zeae (isolates:1; rSTs:1)
- Nocardioides zhouii (isolates:1; rSTs:1)
- Pimelobacter (isolates:8; rSTs:4 tree)
- Propionicicella (isolates:1; rSTs:1)
- Propionicicella superfundia (isolates:1; rSTs:1)
- Propionicimonas (isolates:1; rSTs:1)
- Propionicimonas paludicola (isolates:1; rSTs:1)
- Solicola (isolates:1)
- Solicola gregarius (isolates:1)
- Tenggerimyces (isolates:1; rSTs:1)
- Tenggerimyces flavus (isolates:1; rSTs:1)
- Thermasporomyces (isolates:1; rSTs:1)
- Thermasporomyces composti (isolates:1; rSTs:1)
- Aeromicrobium (isolates:57; rSTs:44 tree)
- Propionibacteriaceae (isolates:809; rSTs:494 tree)
- Acidipropionibacterium (isolates:16; rSTs:11 tree)
- Aestuariimicrobium (isolates:4; rSTs:4 tree)
- Arachnia (isolates:12; rSTs:7 tree)
- Auraticoccus (isolates:2; rSTs:2)
- Brooklawnia (isolates:2; rSTs:2)
- Cutibacterium (isolates:576; rSTs:330 tree)
- Cutibacterium acnes (isolates:462; rSTs:249 tree)
- Cutibacterium avidum (isolates:85; rSTs:59 tree)
- Cutibacterium equinum (isolates:1; rSTs:1)
- Cutibacterium granulosum (isolates:5; rSTs:2)
- Cutibacterium modestum (isolates:12; rSTs:9 tree)
- Cutibacterium namnetense (isolates:8; rSTs:7 tree)
- Cutibacterium porci (isolates:1; rSTs:1)
- Cutibacterium sp. (isolates:2; rSTs:2 tree)
- Desertihabitans (isolates:2; rSTs:2)
- Enemella (isolates:8; rSTs:8 tree)
- Granulicoccus (isolates:2; rSTs:1)
- Granulicoccus phenolivorans (isolates:2; rSTs:1)
- Luteococcus (isolates:2; rSTs:2)
- Luteococcus japonicus (isolates:2; rSTs:2)
- Microlunatus (isolates:15; rSTs:14 tree)
- Microlunatus antarcticus (isolates:1)
- Microlunatus capsulatus (isolates:1; rSTs:1)
- Microlunatus elymi (isolates:1; rSTs:1)
- Microlunatus endophyticus (isolates:1; rSTs:1)
- Microlunatus flavus (isolates:1; rSTs:1)
- Microlunatus kandeliicorticis (isolates:1; rSTs:1)
- Microlunatus panaciterrae (isolates:1; rSTs:1)
- Microlunatus parietis (isolates:1; rSTs:1)
- Microlunatus phosphovorus (isolates:1; rSTs:1)
- Microlunatus sagamiharensis (isolates:1; rSTs:1)
- Microlunatus soli (isolates:1; rSTs:1)
- Microlunatus sp. (isolates:1; rSTs:1)
- Microlunatus speluncae (isolates:1; rSTs:1)
- Microlunatus spumicola (isolates:1; rSTs:1)
- Microlunatus terrae (isolates:1; rSTs:1)
- Naumannella (isolates:2; rSTs:2)
- Nigerium (isolates:2; rSTs:1)
- Nigerium massiliense (isolates:2; rSTs:1)
- Parenemella (isolates:2; rSTs:2)
- Parenemella sanctibonifatiensis (isolates:2; rSTs:2)
- Propionibacterium (isolates:113; rSTs:66 tree)
- Propioniciclava (isolates:10; rSTs:8 tree)
- Propioniferax (isolates:1; rSTs:1)
- Propioniferax innocua (isolates:1; rSTs:1)
- Propionimicrobium (isolates:5; rSTs:4 tree)
- Raineyella (isolates:4; rSTs:4 tree)
- Tessaracoccus (isolates:28; rSTs:22 tree)
- Tessaracoccus antarcticus (isolates:1; rSTs:1)
- Tessaracoccus aquimaris (isolates:1; rSTs:1)
- Tessaracoccus bendigoensis (isolates:1; rSTs:1)
- Tessaracoccus caeni (isolates:1; rSTs:1)
- Tessaracoccus coleopterorum (isolates:1)
- Tessaracoccus defluvii (isolates:1; rSTs:1)
- Tessaracoccus flavescens (isolates:1; rSTs:1)
- Tessaracoccus flavus (isolates:2; rSTs:1)
- Tessaracoccus lapidicaptus (isolates:2; rSTs:2)
- Tessaracoccus massiliensis (isolates:2; rSTs:1)
- Tessaracoccus oleiagri (isolates:1; rSTs:1)
- Tessaracoccus palaemonis (isolates:1; rSTs:1)
- Tessaracoccus rhinocerotis (isolates:1; rSTs:1)
- Tessaracoccus sp. (isolates:11; rSTs:8 tree)
- Tessaracoccus timonensis (isolates:1; rSTs:1)
- Vaginimicrobium (isolates:1; rSTs:1)
- Vaginimicrobium propionicum (isolates:1; rSTs:1)
- Pseudonocardiales (isolates:518; rSTs:434 tree)
- Pseudonocardiaceae (isolates:518; rSTs:434 tree)
- Actinoalloteichus (isolates:11; rSTs:8 tree)
- Actinocrispum (isolates:1; rSTs:1)
- Actinocrispum wychmicini (isolates:1; rSTs:1)
- Actinokineospora (isolates:24; rSTs:20 tree)
- Actinokineospora alba (isolates:3; rSTs:1)
- Actinokineospora auranticolor (isolates:1; rSTs:1)
- Actinokineospora baliensis (isolates:1; rSTs:1)
- Actinokineospora bangkokensis (isolates:1; rSTs:1)
- Actinokineospora cianjurensis (isolates:1; rSTs:1)
- Actinokineospora diospyrosa (isolates:1; rSTs:1)
- Actinokineospora enzanensis (isolates:1; rSTs:1)
- Actinokineospora fastidiosa (isolates:1; rSTs:1)
- Actinokineospora globicatena (isolates:4; rSTs:2)
- Actinokineospora inagensis (isolates:1; rSTs:1)
- Actinokineospora iranica (isolates:1; rSTs:1)
- Actinokineospora pegani (isolates:1; rSTs:1)
- Actinokineospora sp. (isolates:3; rSTs:3 tree)
- Actinokineospora spheciospongiae (isolates:2; rSTs:2)
- Actinokineospora terrae (isolates:1; rSTs:1)
- Actinokineospora xionganensis (isolates:1; rSTs:1)
- Actinomycetospora (isolates:19; rSTs:19 tree)
- Actinomycetospora callitridis (isolates:1; rSTs:1)
- Actinomycetospora chiangmaiensis (isolates:1; rSTs:1)
- Actinomycetospora chibensis (isolates:1; rSTs:1)
- Actinomycetospora cinnamomea (isolates:1; rSTs:1)
- Actinomycetospora corticicola (isolates:1; rSTs:1)
- Actinomycetospora endophytica (isolates:1; rSTs:1)
- Actinomycetospora lemnae (isolates:1)
- Actinomycetospora lutea (isolates:1; rSTs:1)
- Actinomycetospora soli (isolates:1; rSTs:1)
- Actinomycetospora sp. (isolates:8; rSTs:9 tree)
- Actinomycetospora straminea (isolates:1; rSTs:1)
- Actinomycetospora succinea (isolates:1; rSTs:1)
- Actinophytocola (isolates:6; rSTs:5 tree)
- Actinosynnema (isolates:4; rSTs:2)
- Alloactinosynnema (isolates:1; rSTs:1)
- Alloactinosynnema sp. (isolates:1; rSTs:1)
- Allokutzneria (isolates:4; rSTs:3 tree)
- Allosaccharopolyspora (isolates:1; rSTs:1)
- Allosaccharopolyspora coralli (isolates:1; rSTs:1)
- Amycolatopsis (isolates:166; rSTs:135 tree)
- Amycolatopsis acidicola (isolates:1; rSTs:1)
- Amycolatopsis acididurans (isolates:1; rSTs:1)
- Amycolatopsis acidiphila (isolates:3; rSTs:1)
- Amycolatopsis aidingensis (isolates:1; rSTs:1)
- Amycolatopsis alba (isolates:2; rSTs:1)
- Amycolatopsis albispora (isolates:1; rSTs:1)
- Amycolatopsis alkalitolerans (isolates:1; rSTs:1)
- Amycolatopsis anabasis (isolates:1; rSTs:1)
- Amycolatopsis antarctica (isolates:1; rSTs:1)
- Amycolatopsis arida (isolates:2; rSTs:1)
- Amycolatopsis australiensis (isolates:1; rSTs:1)
- Amycolatopsis azurea (isolates:2; rSTs:1)
- Amycolatopsis balhimycina (isolates:2; rSTs:1)
- Amycolatopsis bartoniae (isolates:3; rSTs:1)
- Amycolatopsis benzoatilytica (isolates:1; rSTs:1)
- Amycolatopsis bullii (isolates:1; rSTs:1)
- Amycolatopsis camponoti (isolates:1; rSTs:1)
- Amycolatopsis cihanbeyliensis (isolates:1; rSTs:1)
- Amycolatopsis circi (isolates:1; rSTs:1)
- Amycolatopsis coloradensis (isolates:1; rSTs:1)
- Amycolatopsis decaplanina (isolates:1; rSTs:1)
- Amycolatopsis dendrobii (isolates:1; rSTs:1)
- Amycolatopsis deserti (isolates:1; rSTs:1)
- Amycolatopsis eburnea (isolates:1; rSTs:1)
- Amycolatopsis echigonensis (isolates:1; rSTs:1)
- Amycolatopsis endophytica (isolates:1; rSTs:1)
- Amycolatopsis granulosa (isolates:1; rSTs:1)
- Amycolatopsis iheyensis (isolates:1; rSTs:1)
- Amycolatopsis japonica (isolates:1; rSTs:1)
- Amycolatopsis jejuensis (isolates:1; rSTs:1)
- Amycolatopsis jiangsuensis (isolates:1; rSTs:1)
- Amycolatopsis kentuckyensis (isolates:1; rSTs:1)
- Amycolatopsis keratiniphila (isolates:4; rSTs:3 tree)
- Amycolatopsis lexingtonensis (isolates:2; rSTs:1)
- Amycolatopsis lurida (isolates:2; rSTs:1)
- Amycolatopsis magusensis (isolates:2; rSTs:1)
- Amycolatopsis marina (isolates:1; rSTs:1)
- Amycolatopsis mediterranei (isolates:8; rSTs:2)
- Amycolatopsis methanolica (isolates:2; rSTs:1)
- Amycolatopsis mongoliensis (isolates:1)
- Amycolatopsis nigrescens (isolates:1; rSTs:1)
- Amycolatopsis niigatensis (isolates:1; rSTs:1)
- Amycolatopsis nivea (isolates:1; rSTs:1)
- Amycolatopsis oliviviridis (isolates:1; rSTs:1)
- Amycolatopsis orientalis (isolates:2; rSTs:2)
- Amycolatopsis palatopharyngis (isolates:1; rSTs:1)
- Amycolatopsis panacis (isolates:1; rSTs:1)
- Amycolatopsis pithecellobii (isolates:1; rSTs:1)
- Amycolatopsis pittospori (isolates:1; rSTs:1)
- Amycolatopsis pretoriensis (isolates:2; rSTs:1)
- Amycolatopsis regifaucium (isolates:3; rSTs:1)
- Amycolatopsis rhizosphaerae (isolates:1; rSTs:1)
- Amycolatopsis rifamycinica (isolates:1; rSTs:1)
- Amycolatopsis roodepoortensis (isolates:2; rSTs:2)
- Amycolatopsis ruanii (isolates:1; rSTs:1)
- Amycolatopsis rubida (isolates:3; rSTs:1)
- Amycolatopsis saalfeldensis (isolates:1; rSTs:1)
- Amycolatopsis sacchari (isolates:1; rSTs:1)
- Amycolatopsis sp. (isolates:61; rSTs:56 tree)
- Amycolatopsis suaedae (isolates:1; rSTs:1)
- Amycolatopsis sulphurea (isolates:1; rSTs:1)
- Amycolatopsis taiwanensis (isolates:2; rSTs:2)
- Amycolatopsis thailandensis (isolates:1; rSTs:1)
- Amycolatopsis thermalba (isolates:2; rSTs:2)
- Amycolatopsis thermoflava (isolates:2; rSTs:2)
- Amycolatopsis thermophila (isolates:1; rSTs:1)
- Amycolatopsis tolypomycina (isolates:1; rSTs:1)
- Amycolatopsis tucumanensis (isolates:1; rSTs:1)
- Amycolatopsis umgeniensis (isolates:1; rSTs:1)
- Amycolatopsis vancoresmycina (isolates:2; rSTs:1)
- Amycolatopsis vastitatis (isolates:1; rSTs:1)
- Amycolatopsis viridis (isolates:1; rSTs:1)
- Amycolatopsis xylanica (isolates:1; rSTs:1)
- Crossiella (isolates:7; rSTs:5 tree)
- Gandjariella (isolates:1; rSTs:1)
- Gandjariella thermophila (isolates:1; rSTs:1)
- Goodfellowiella (isolates:1; rSTs:1)
- Goodfellowiella coeruleoviolacea (isolates:1; rSTs:1)
- Haloechinothrix (isolates:4; rSTs:4 tree)
- Halosaccharopolyspora (isolates:1; rSTs:1)
- Halosaccharopolyspora lacisalsi (isolates:1; rSTs:1)
- Herbihabitans (isolates:1; rSTs:1)
- Herbihabitans rhizosphaerae (isolates:1; rSTs:1)
- Kibdelosporangium (isolates:9; rSTs:8 tree)
- Kutzneria (isolates:7; rSTs:5 tree)
- Labedaea (isolates:1; rSTs:1)
- Labedaea rhizosphaerae (isolates:1; rSTs:1)
- Lentzea (isolates:35; rSTs:31 tree)
- Lentzea aerocolonigenes (isolates:3; rSTs:1)
- Lentzea alba (isolates:1; rSTs:1)
- Lentzea albida (isolates:1; rSTs:1)
- Lentzea albidocapillata (isolates:3; rSTs:2)
- Lentzea atacamensis (isolates:2; rSTs:2)
- Lentzea californiensis (isolates:1; rSTs:1)
- Lentzea cavernae (isolates:1; rSTs:1)
- Lentzea flava (isolates:2; rSTs:1)
- Lentzea flaviverrucosa (isolates:2; rSTs:1)
- Lentzea fradiae (isolates:1; rSTs:1)
- Lentzea guizhouensis (isolates:1; rSTs:1)
- Lentzea indica (isolates:1; rSTs:1)
- Lentzea jiangxiensis (isolates:1; rSTs:1)
- Lentzea kentuckyensis (isolates:1; rSTs:1)
- Lentzea nigeriaca (isolates:1; rSTs:1)
- Lentzea pudingi (isolates:1; rSTs:1)
- Lentzea sp. (isolates:8; rSTs:9 tree)
- Lentzea terrae (isolates:1; rSTs:1)
- Lentzea tibetensis (isolates:1; rSTs:1)
- Lentzea waywayandensis (isolates:1; rSTs:1)
- Lentzea xinjiangensis (isolates:1; rSTs:1)
- Longimycelium (isolates:1; rSTs:1)
- Longimycelium tulufanense (isolates:1; rSTs:1)
- Prauserella (isolates:19; rSTs:14 tree)
- Prauserella aidingensis (isolates:1; rSTs:1)
- Prauserella alba (isolates:1; rSTs:1)
- Prauserella cavernicola (isolates:1; rSTs:1)
- Prauserella coralliicola (isolates:1; rSTs:1)
- Prauserella endophytica (isolates:1; rSTs:1)
- Prauserella flavalba (isolates:1; rSTs:1)
- Prauserella halophila (isolates:1; rSTs:1)
- Prauserella isguenensis (isolates:1; rSTs:1)
- Prauserella marina (isolates:3; rSTs:1)
- Prauserella muralis (isolates:2; rSTs:1)
- Prauserella rugosa (isolates:2; rSTs:1)
- Prauserella sediminis (isolates:1; rSTs:1)
- Prauserella shujinwangii (isolates:1; rSTs:1)
- Prauserella sp. (isolates:2; rSTs:1)
- Pseudonocardia (isolates:84; rSTs:69 tree)
- Pseudonocardia abyssalis (isolates:2; rSTs:1)
- Pseudonocardia acaciae (isolates:1; rSTs:1)
- Pseudonocardia acidicola (isolates:1; rSTs:1)
- Pseudonocardia alaniniphila (isolates:1; rSTs:1)
- Pseudonocardia alni (isolates:2; rSTs:2)
- Pseudonocardia ammonioxydans (isolates:1; rSTs:1)
- Pseudonocardia antarctica (isolates:1; rSTs:1)
- Pseudonocardia asaccharolytica (isolates:2; rSTs:1)
- Pseudonocardia autotrophica (isolates:2; rSTs:1)
- Pseudonocardia bannensis (isolates:1; rSTs:1)
- Pseudonocardia broussonetiae (isolates:1; rSTs:1)
- Pseudonocardia chloroethenivorans (isolates:1)
- Pseudonocardia cypriaca (isolates:1; rSTs:1)
- Pseudonocardia dioxanivorans (isolates:3; rSTs:2)
- Pseudonocardia endophytica (isolates:1; rSTs:1)
- Pseudonocardia eucalypti (isolates:1; rSTs:1)
- Pseudonocardia halophobica (isolates:1; rSTs:1)
- Pseudonocardia hierapolitana (isolates:1; rSTs:1)
- Pseudonocardia humida (isolates:1; rSTs:1)
- Pseudonocardia hydrocarbonoxydans (isolates:1; rSTs:1)
- Pseudonocardia kujensis (isolates:1; rSTs:1)
- Pseudonocardia kunmingensis (isolates:1; rSTs:1)
- Pseudonocardia lacus (isolates:1)
- Pseudonocardia nigra (isolates:1; rSTs:1)
- Pseudonocardia oceani (isolates:5; rSTs:1)
- Pseudonocardia oroxyli (isolates:1; rSTs:1)
- Pseudonocardia parietis (isolates:1; rSTs:1)
- Pseudonocardia petroleophila (isolates:1; rSTs:1)
- Pseudonocardia pini (isolates:1; rSTs:1)
- Pseudonocardia sediminis (isolates:1; rSTs:1)
- Pseudonocardia sp. (isolates:38; rSTs:34 tree)
- Pseudonocardia spinosispora (isolates:1; rSTs:1)
- Pseudonocardia sulfidoxydans (isolates:1; rSTs:1)
- Pseudonocardia terrae (isolates:1; rSTs:1)
- Pseudonocardia tetrahydrofuranoxydans (isolates:1)
- Pseudonocardia thermophila (isolates:1; rSTs:1)
- Pseudonocardia xinjiangensis (isolates:1; rSTs:1)
- Qaidamihabitans (isolates:1; rSTs:1)
- Qaidamihabitans albus (isolates:1; rSTs:1)
- Saccharomonospora (isolates:19; rSTs:18 tree)
- Saccharomonospora amisosensis (isolates:1; rSTs:1)
- Saccharomonospora azurea (isolates:2; rSTs:2)
- Saccharomonospora cyanea (isolates:1; rSTs:1)
- Saccharomonospora glauca (isolates:1; rSTs:1)
- Saccharomonospora halophila (isolates:1; rSTs:1)
- Saccharomonospora iraqiensis (isolates:2; rSTs:2)
- Saccharomonospora marina (isolates:1; rSTs:1)
- Saccharomonospora piscinae (isolates:3; rSTs:3 tree)
- Saccharomonospora saliphila (isolates:1; rSTs:1)
- Saccharomonospora sp. (isolates:1; rSTs:1)
- Saccharomonospora viridis (isolates:3; rSTs:2)
- Saccharomonospora xinjiangensis (isolates:2; rSTs:2)
- Saccharopolyspora (isolates:49; rSTs:39 tree)
- Saccharopolyspora antimicrobica (isolates:2; rSTs:2)
- Saccharopolyspora aridisoli (isolates:1; rSTs:1)
- Saccharopolyspora dendranthemae (isolates:1; rSTs:1)
- Saccharopolyspora elongata (isolates:1; rSTs:1)
- Saccharopolyspora endophytica (isolates:1; rSTs:1)
- Saccharopolyspora erythraea (isolates:7; rSTs:2)
- Saccharopolyspora flava (isolates:1; rSTs:1)
- Saccharopolyspora gloriosae (isolates:2; rSTs:2)
- Saccharopolyspora gregorii (isolates:1; rSTs:1)
- Saccharopolyspora hirsuta (isolates:1; rSTs:1)
- Saccharopolyspora hordei (isolates:1; rSTs:1)
- Saccharopolyspora indica (isolates:2; rSTs:1)
- Saccharopolyspora karakumensis (isolates:1; rSTs:1)
- Saccharopolyspora kobensis (isolates:2; rSTs:1)
- Saccharopolyspora oryzae (isolates:1; rSTs:1)
- Saccharopolyspora phatthalungensis (isolates:2; rSTs:1)
- Saccharopolyspora pogona (isolates:1; rSTs:1)
- Saccharopolyspora rectivirgula (isolates:2; rSTs:1)
- Saccharopolyspora rhizosphaerae (isolates:1; rSTs:1)
- Saccharopolyspora rosea (isolates:1; rSTs:1)
- Saccharopolyspora shandongensis (isolates:1; rSTs:1)
- Saccharopolyspora soli (isolates:1; rSTs:1)
- Saccharopolyspora sp. (isolates:10; rSTs:9 tree)
- Saccharopolyspora spinosa (isolates:3; rSTs:3 tree)
- Saccharopolyspora subtropica (isolates:1; rSTs:1)
- Saccharopolyspora terrae (isolates:1; rSTs:1)
- Saccharothrix (isolates:28; rSTs:27 tree)
- Saccharothrix algeriensis (isolates:1; rSTs:1)
- Saccharothrix australiensis (isolates:1; rSTs:1)
- Saccharothrix carnea (isolates:1; rSTs:1)
- Saccharothrix coeruleofusca (isolates:2; rSTs:2)
- Saccharothrix deserti (isolates:1; rSTs:1)
- Saccharothrix ecbatanensis (isolates:1; rSTs:1)
- Saccharothrix espanaensis (isolates:1; rSTs:1)
- Saccharothrix longispora (isolates:2; rSTs:2)
- Saccharothrix luteola (isolates:1; rSTs:1)
- Saccharothrix obliqua (isolates:1; rSTs:1)
- Saccharothrix saharensis (isolates:1; rSTs:1)
- Saccharothrix sp. (isolates:8; rSTs:7 tree)
- Saccharothrix syringae (isolates:2; rSTs:2)
- Saccharothrix tamanrassetensis (isolates:1; rSTs:1)
- Saccharothrix texasensis (isolates:1; rSTs:1)
- Saccharothrix variisporea (isolates:1; rSTs:1)
- Saccharothrix violaceirubra (isolates:1; rSTs:1)
- Saccharothrix yanglingensis (isolates:1; rSTs:1)
- Sciscionella (isolates:2; rSTs:2)
- Solihabitans (isolates:1; rSTs:1)
- Solihabitans fulvus (isolates:1; rSTs:1)
- Streptoalloteichus (isolates:2; rSTs:2)
- Tamaricihabitans (isolates:1; rSTs:1)
- Tamaricihabitans halophyticus (isolates:1; rSTs:1)
- Thermocrispum (isolates:2; rSTs:2)
- Umezawaea (isolates:5; rSTs:4 tree)
- Pseudonocardiaceae (isolates:518; rSTs:434 tree)
- Sporichthyales (isolates:2; rSTs:2)
- Streptosporangiales (isolates:422; rSTs:375 tree)
- Nocardiopsaceae (isolates:110; rSTs:96 tree)
- Actinorugispora (isolates:1; rSTs:1)
- Actinorugispora endophytica (isolates:1; rSTs:1)
- Allosalinactinospora (isolates:1; rSTs:1)
- Allosalinactinospora lopnorensis (isolates:1; rSTs:1)
- Haloactinospora (isolates:1; rSTs:1)
- Haloactinospora alba (isolates:1; rSTs:1)
- Lipingzhangella (isolates:1; rSTs:1)
- Lipingzhangella halophila (isolates:1; rSTs:1)
- Marinactinospora (isolates:1; rSTs:1)
- Marinactinospora thermotolerans (isolates:1; rSTs:1)
- Marinitenerispora (isolates:3; rSTs:1)
- Marinitenerispora sediminis (isolates:3; rSTs:1)
- Murinocardiopsis (isolates:1; rSTs:1)
- Murinocardiopsis flavida (isolates:1; rSTs:1)
- Nocardiopsis (isolates:80; rSTs:70 tree)
- Nocardiopsis aegyptia (isolates:1; rSTs:1)
- Nocardiopsis akebiae (isolates:1; rSTs:1)
- Nocardiopsis alba (isolates:4; rSTs:4 tree)
- Nocardiopsis alborubida (isolates:2; rSTs:1)
- Nocardiopsis algeriensis (isolates:1; rSTs:1)
- Nocardiopsis alkaliphila (isolates:1; rSTs:1)
- Nocardiopsis baichengensis (isolates:1; rSTs:1)
- Nocardiopsis changdeensis (isolates:1; rSTs:1)
- Nocardiopsis chromatogenes (isolates:1; rSTs:1)
- Nocardiopsis composta (isolates:1; rSTs:1)
- Nocardiopsis coralli (isolates:1; rSTs:1)
- Nocardiopsis dassonvillei (isolates:8; rSTs:5 tree)
- Nocardiopsis deserti (isolates:1; rSTs:1)
- Nocardiopsis endophytica (isolates:1; rSTs:1)
- Nocardiopsis exhalans (isolates:1; rSTs:1)
- Nocardiopsis flavescens (isolates:1; rSTs:1)
- Nocardiopsis ganjiahuensis (isolates:1; rSTs:1)
- Nocardiopsis gilva (isolates:2; rSTs:2)
- Nocardiopsis halophila (isolates:1; rSTs:1)
- Nocardiopsis halotolerans (isolates:1; rSTs:1)
- Nocardiopsis kunsanensis (isolates:2; rSTs:2)
- Nocardiopsis listeri (isolates:1; rSTs:1)
- Nocardiopsis lucentensis (isolates:1; rSTs:1)
- Nocardiopsis metallicus (isolates:1; rSTs:1)
- Nocardiopsis mwathae (isolates:1; rSTs:1)
- Nocardiopsis potens (isolates:1; rSTs:1)
- Nocardiopsis prasina (isolates:1; rSTs:1)
- Nocardiopsis quinghaiensis (isolates:1; rSTs:1)
- Nocardiopsis salina (isolates:1; rSTs:1)
- Nocardiopsis sinuspersici (isolates:2; rSTs:2)
- Nocardiopsis sp. (isolates:29; rSTs:24 tree)
- Nocardiopsis suaedae (isolates:1; rSTs:1)
- Nocardiopsis synnemataformans (isolates:1; rSTs:1)
- Nocardiopsis terrae (isolates:2; rSTs:1)
- Nocardiopsis trehalosi (isolates:1; rSTs:1)
- Nocardiopsis valliformis (isolates:1; rSTs:1)
- Nocardiopsis xinjiangensis (isolates:1; rSTs:1)
- Spinactinospora (isolates:1; rSTs:1)
- Spinactinospora alkalitolerans (isolates:1; rSTs:1)
- Spiractinospora (isolates:1; rSTs:1)
- Spiractinospora alimapuensis (isolates:1; rSTs:1)
- Streptomonospora (isolates:9; rSTs:9 tree)
- Thermobifida (isolates:10; rSTs:8 tree)
- Actinorugispora (isolates:1; rSTs:1)
- Streptosporangiaceae (isolates:197; rSTs:178 tree)
- Acrocarpospora (isolates:5; rSTs:5 tree)
- Bailinhaonella (isolates:1; rSTs:1)
- Bailinhaonella thermotolerans (isolates:1; rSTs:1)
- Herbidospora (isolates:8; rSTs:9 tree)
- Herbidospora cretacea (isolates:1; rSTs:1)
- Herbidospora daliensis (isolates:1; rSTs:1)
- Herbidospora galbida (isolates:1; rSTs:1)
- Herbidospora mongoliensis (isolates:1; rSTs:1)
- Herbidospora sakaeratensis (isolates:1; rSTs:1)
- Herbidospora solisilvae (isolates:1; rSTs:1)
- Herbidospora sp. (isolates:1; rSTs:2)
- Herbidospora yilanensis (isolates:1; rSTs:1)
- Microbispora (isolates:38; rSTs:31 tree)
- Microbispora amethystogenes (isolates:1; rSTs:1)
- Microbispora bryophytorum (isolates:3; rSTs:1)
- Microbispora camponoti (isolates:1; rSTs:1)
- Microbispora catharanthi (isolates:1; rSTs:1)
- Microbispora cellulosiformans (isolates:1; rSTs:1)
- Microbispora corallina (isolates:1; rSTs:1)
- Microbispora fusca (isolates:1; rSTs:1)
- Microbispora hainanensis (isolates:3; rSTs:3)
- Microbispora oryzae (isolates:1; rSTs:1)
- Microbispora rosea (isolates:6; rSTs:3 tree)
- Microbispora siamensis (isolates:1; rSTs:1)
- Microbispora sitophila (isolates:1; rSTs:1)
- Microbispora sp. (isolates:15; rSTs:13 tree)
- Microbispora tritici (isolates:1; rSTs:1)
- Microbispora triticiradicis (isolates:1; rSTs:1)
- Microtetraspora (isolates:5; rSTs:5 tree)
- Nonomuraea (isolates:72; rSTs:67 tree)
- Nonomuraea africana (isolates:1; rSTs:1)
- Nonomuraea angiospora (isolates:2; rSTs:2)
- Nonomuraea antri (isolates:1; rSTs:1)
- Nonomuraea aridisoli (isolates:1; rSTs:1)
- Nonomuraea aurantiaca (isolates:1; rSTs:1)
- Nonomuraea basaltis (isolates:1; rSTs:1)
- Nonomuraea candida (isolates:1; rSTs:1)
- Nonomuraea cavernae (isolates:2; rSTs:1)
- Nonomuraea ceibae (isolates:1; rSTs:1)
- Nonomuraea corallina (isolates:1)
- Nonomuraea coxensis (isolates:2; rSTs:1)
- Nonomuraea cypriaca (isolates:1; rSTs:1)
- Nonomuraea deserti (isolates:1; rSTs:1)
- Nonomuraea diastatica (isolates:1; rSTs:1)
- Nonomuraea dietziae (isolates:1; rSTs:1)
- Nonomuraea endophytica (isolates:1; rSTs:1)
- Nonomuraea fuscirosea (isolates:2; rSTs:2)
- Nonomuraea gerenzanensis (isolates:1; rSTs:1)
- Nonomuraea glycinis (isolates:3; rSTs:2)
- Nonomuraea guangzhouensis (isolates:1; rSTs:1)
- Nonomuraea harbinensis (isolates:1; rSTs:1)
- Nonomuraea indica (isolates:1; rSTs:1)
- Nonomuraea jabiensis (isolates:1; rSTs:1)
- Nonomuraea jiangxiensis (isolates:1; rSTs:1)
- Nonomuraea kuesteri (isolates:1; rSTs:1)
- Nonomuraea lactucae (isolates:1; rSTs:1)
- Nonomuraea longispora (isolates:1; rSTs:1)
- Nonomuraea maritima (isolates:1; rSTs:1)
- Nonomuraea mesophila (isolates:1; rSTs:1)
- Nonomuraea montanisoli (isolates:1; rSTs:1)
- Nonomuraea muscovyensis (isolates:1; rSTs:1)
- Nonomuraea phyllanthi (isolates:2; rSTs:2)
- Nonomuraea polychroma (isolates:1; rSTs:1)
- Nonomuraea pusilla (isolates:2; rSTs:1)
- Nonomuraea rhizosphaerae (isolates:1; rSTs:1)
- Nonomuraea rhodomycinica (isolates:1; rSTs:1)
- Nonomuraea roseoviolacea (isolates:1; rSTs:1)
- Nonomuraea rubra (isolates:1; rSTs:1)
- Nonomuraea sediminis (isolates:1; rSTs:1)
- Nonomuraea solani (isolates:1; rSTs:1)
- Nonomuraea soli (isolates:1; rSTs:1)
- Nonomuraea sp. (isolates:16; rSTs:16 tree)
- Nonomuraea spiralis (isolates:1; rSTs:1)
- Nonomuraea terrae (isolates:1; rSTs:1)
- Nonomuraea thailandensis (isolates:1; rSTs:1)
- Nonomuraea turkmeniaca (isolates:1; rSTs:1)
- Nonomuraea typhae (isolates:1; rSTs:1)
- Nonomuraea wenchangensis (isolates:1; rSTs:1)
- Nonomuraea zeae (isolates:1; rSTs:1)
- Planobispora (isolates:6; rSTs:5 tree)
- Planomonospora (isolates:6; rSTs:6 tree)
- Planotetraspora (isolates:6; rSTs:6 tree)
- Rhizohabitans (isolates:1; rSTs:1)
- Rhizohabitans arisaemae (isolates:1; rSTs:1)
- Sinosporangium (isolates:2; rSTs:2)
- Sphaerimonospora (isolates:3; rSTs:2)
- Sphaerisporangium (isolates:14; rSTs:10 tree)
- Sphaerisporangium album (isolates:1; rSTs:1)
- Sphaerisporangium corydalis (isolates:1; rSTs:1)
- Sphaerisporangium fuscum (isolates:1; rSTs:1)
- Sphaerisporangium krabiense (isolates:2; rSTs:1)
- Sphaerisporangium melleum (isolates:2; rSTs:1)
- Sphaerisporangium perillae (isolates:1; rSTs:1)
- Sphaerisporangium rubeum (isolates:1; rSTs:1)
- Sphaerisporangium rufum (isolates:1; rSTs:1)
- Sphaerisporangium siamense (isolates:2; rSTs:1)
- Sphaerisporangium sp. (isolates:1; rSTs:1)
- Sphaerisporangium viridialbum (isolates:1)
- Spongiactinospora (isolates:3; rSTs:3 tree)
- Streptosporangium (isolates:21; rSTs:20 tree)
- Streptosporangium album (isolates:1; rSTs:1)
- Streptosporangium amethystogenes (isolates:1; rSTs:1)
- Streptosporangium becharense (isolates:2; rSTs:1)
- Streptosporangium brasiliense (isolates:1; rSTs:1)
- Streptosporangium canum (isolates:1; rSTs:1)
- Streptosporangium carneum (isolates:1; rSTs:1)
- Streptosporangium lutulentum (isolates:1; rSTs:1)
- Streptosporangium minutum (isolates:1; rSTs:1)
- Streptosporangium pseudovulgare (isolates:1; rSTs:1)
- Streptosporangium roseum (isolates:1; rSTs:1)
- Streptosporangium saharense (isolates:1; rSTs:1)
- Streptosporangium sandarakinum (isolates:1; rSTs:1)
- Streptosporangium sp. (isolates:6; rSTs:6)
- Streptosporangium subroseum (isolates:1; rSTs:1)
- Streptosporangium violaceochromogenes (isolates:1; rSTs:1)
- Thermoactinospora (isolates:1; rSTs:1)
- Thermoactinospora rubra (isolates:1; rSTs:1)
- Thermobispora (isolates:2; rSTs:2)
- Thermobispora bispora (isolates:2; rSTs:2)
- Thermocatellispora (isolates:1; rSTs:1)
- Thermocatellispora tengchongensis (isolates:1; rSTs:1)
- Thermopolyspora (isolates:2; rSTs:1)
- Thermopolyspora flexuosa (isolates:2; rSTs:1)
- Thermomonosporaceae (isolates:113; rSTs:99 tree)
- Actinoallomurus (isolates:8; rSTs:8 tree)
- Actinoallomurus bryophytorum (isolates:1; rSTs:1)
- Actinoallomurus iriomotensis (isolates:2; rSTs:2)
- Actinoallomurus purpureus (isolates:1; rSTs:1)
- Actinoallomurus rhizosphaericola (isolates:1; rSTs:1)
- Actinoallomurus soli (isolates:1; rSTs:1)
- Actinoallomurus sp. (isolates:1; rSTs:1)
- Actinoallomurus spadix (isolates:1; rSTs:1)
- Actinocorallia (isolates:4; rSTs:4 tree)
- Actinomadura (isolates:94; rSTs:80 tree)
- Actinomadura alba (isolates:1; rSTs:1)
- Actinomadura algeriensis (isolates:1; rSTs:1)
- Actinomadura atramentaria (isolates:1; rSTs:1)
- Actinomadura bangladeshensis (isolates:2; rSTs:1)
- Actinomadura barringtoniae (isolates:1; rSTs:1)
- Actinomadura catellatispora (isolates:1; rSTs:1)
- Actinomadura chibensis (isolates:2; rSTs:1)
- Actinomadura citrea (isolates:3; rSTs:2)
- Actinomadura coerulea (isolates:2; rSTs:1)
- Actinomadura craniellae (isolates:1; rSTs:1)
- Actinomadura cremea (isolates:1; rSTs:1)
- Actinomadura darangshiensis (isolates:1; rSTs:1)
- Actinomadura decatromicini (isolates:1; rSTs:1)
- Actinomadura fibrosa (isolates:1; rSTs:1)
- Actinomadura flavalba (isolates:1; rSTs:1)
- Actinomadura formosensis (isolates:2; rSTs:1)
- Actinomadura geliboluensis (isolates:2; rSTs:1)
- Actinomadura graeca (isolates:1; rSTs:1)
- Actinomadura hallensis (isolates:1; rSTs:1)
- Actinomadura harenae (isolates:1; rSTs:1)
- Actinomadura hibisca (isolates:1; rSTs:1)
- Actinomadura kijaniata (isolates:1; rSTs:1)
- Actinomadura latina (isolates:2; rSTs:1)
- Actinomadura litoris (isolates:2; rSTs:1)
- Actinomadura logoneensis (isolates:1; rSTs:1)
- Actinomadura luteofluorescens (isolates:1; rSTs:1)
- Actinomadura macra (isolates:1; rSTs:1)
- Actinomadura macrotermitis (isolates:1; rSTs:1)
- Actinomadura madurae (isolates:10; rSTs:8 tree)
- Actinomadura mexicana (isolates:1; rSTs:1)
- Actinomadura meyerae (isolates:1; rSTs:1)
- Actinomadura montaniterrae (isolates:1; rSTs:1)
- Actinomadura namibiensis (isolates:1; rSTs:1)
- Actinomadura nitritigenes (isolates:1; rSTs:1)
- Actinomadura oligospora (isolates:1; rSTs:1)
- Actinomadura parmotrematis (isolates:1; rSTs:1)
- Actinomadura pelletieri (isolates:1; rSTs:1)
- Actinomadura physcomitrii (isolates:1; rSTs:1)
- Actinomadura rayongensis (isolates:1; rSTs:1)
- Actinomadura rifamycini (isolates:1; rSTs:1)
- Actinomadura roseirufa (isolates:1; rSTs:1)
- Actinomadura rubrisoli (isolates:1; rSTs:1)
- Actinomadura rubrobrunea (isolates:2; rSTs:1)
- Actinomadura rubteroloni (isolates:1; rSTs:1)
- Actinomadura rudentiformis (isolates:1; rSTs:1)
- Actinomadura rupiterrae (isolates:1; rSTs:1)
- Actinomadura soli (isolates:1; rSTs:1)
- Actinomadura sp. (isolates:21; rSTs:18 tree)
- Actinomadura spongiicola (isolates:1; rSTs:1)
- Actinomadura syzygii (isolates:1; rSTs:1)
- Actinomadura terrae (isolates:1; rSTs:1)
- Actinomadura verrucosospora (isolates:1; rSTs:1)
- Actinomadura violacea (isolates:1; rSTs:1)
- Actinomadura viridis (isolates:1; rSTs:1)
- Actinomadura xylanilytica (isolates:1; rSTs:1)
- Thermomonospora (isolates:6; rSTs:6 tree)
- Thermostaphylospora (isolates:1; rSTs:1)
- Thermostaphylospora chromogena (isolates:1; rSTs:1)
- Actinoallomurus (isolates:8; rSTs:8 tree)
- Treboniaceae (isolates:1; rSTs:1)
- Nocardiopsaceae (isolates:110; rSTs:96 tree)
- Candidatus Humimicrobiia (isolates:2)
- Candidatus Humimicrobiales (isolates:2)
- Coriobacteriia (isolates:597; rSTs:420 tree)
- Anaerosomatales (isolates:2; rSTs:2)
- Coriobacteriales (isolates:354; rSTs:248 tree)
- Atopobiaceae (isolates:53; rSTs:45 tree)
- Atopobium (isolates:6; rSTs:5 tree)
- Fannyhessea (isolates:6; rSTs:3 tree)
- Granulimonas (isolates:1; rSTs:1)
- Granulimonas faecalis (isolates:1; rSTs:1)
- Lancefieldella (isolates:6; rSTs:4 tree)
- Leptogranulimonas (isolates:1; rSTs:1)
- Leptogranulimonas caecicola (isolates:1; rSTs:1)
- Olsenella (isolates:15; rSTs:13 tree)
- Olsenella massiliensis (isolates:1; rSTs:1)
- Olsenella phocaeensis (isolates:1; rSTs:1)
- Olsenella porci (isolates:1; rSTs:1)
- Olsenella profusa (isolates:2; rSTs:2)
- Olsenella sp. (isolates:4; rSTs:4 tree)
- Olsenella timonensis (isolates:1; rSTs:1)
- Olsenella uli (isolates:4; rSTs:2)
- Olsenella urininfantis (isolates:1; rSTs:1)
- Parafannyhessea (isolates:6; rSTs:6 tree)
- Paratractidigestivibacter (isolates:1; rSTs:1)
- Paratractidigestivibacter faecalis (isolates:1; rSTs:1)
- Parolsenella (isolates:4; rSTs:4 tree)
- Thermophilibacter (isolates:5; rSTs:5 tree)
- Tractidigestivibacter (isolates:2; rSTs:2)
- Coriobacteriaceae (isolates:301; rSTs:203 tree)
- Collinsella (isolates:280; rSTs:187 tree)
- Candidatus Collinsella stercoripullorum (isolates:3; rSTs:3 tree)
- Collinsella acetigenes (isolates:1; rSTs:1)
- Collinsella aerofaciens (isolates:153; rSTs:91 tree)
- Collinsella bouchesdurhonensis (isolates:4; rSTs:3 tree)
- Collinsella ihumii (isolates:5; rSTs:3 tree)
- Collinsella intestinalis (isolates:8; rSTs:6 tree)
- Collinsella phocaeensis (isolates:1; rSTs:1)
- Collinsella provencensis (isolates:1; rSTs:1)
- Collinsella sp. (isolates:93; rSTs:72 tree)
- Collinsella stercoris (isolates:4; rSTs:1)
- Collinsella tanakaei (isolates:6; rSTs:4 tree)
- Collinsella vaginalis (isolates:1; rSTs:1)
- Coriobacterium (isolates:1; rSTs:1)
- Coriobacterium glomerans (isolates:1; rSTs:1)
- Enorma (isolates:10; rSTs:9 tree)
- Olegusella (isolates:2; rSTs:1)
- Olegusella massiliensis (isolates:2; rSTs:1)
- Parvibacter (isolates:4; rSTs:2)
- Parvibacter caecicola (isolates:4; rSTs:2)
- Senegalimassilia (isolates:4; rSTs:3 tree)
- Collinsella (isolates:280; rSTs:187 tree)
- Atopobiaceae (isolates:53; rSTs:45 tree)
- Eggerthellales (isolates:241; rSTs:170 tree)
- Eggerthellaceae (isolates:241; rSTs:170 tree)
- Adlercreutzia (isolates:34; rSTs:31 tree)
- Adlercreutzia agrestimuris (isolates:1; rSTs:1)
- Adlercreutzia aquisgranensis (isolates:1; rSTs:1)
- Adlercreutzia caecimuris (isolates:6; rSTs:6 tree)
- Adlercreutzia equolifaciens (isolates:10; rSTs:8 tree)
- Adlercreutzia hattorii (isolates:1; rSTs:1)
- Adlercreutzia mucosicola (isolates:4; rSTs:3 tree)
- Adlercreutzia muris (isolates:5; rSTs:4 tree)
- Adlercreutzia rubneri (isolates:2; rSTs:2)
- Adlercreutzia sp. (isolates:4; rSTs:5 tree)
- Anaerotardibacter (isolates:1)
- Anaerotardibacter muris (isolates:1)
- Arabiibacter (isolates:2; rSTs:1)
- Arabiibacter massiliensis (isolates:2; rSTs:1)
- Berryella (isolates:3; rSTs:3 tree)
- Cryptobacterium (isolates:1; rSTs:1)
- Cryptobacterium curtum (isolates:1; rSTs:1)
- Curtanaerobium (isolates:2; rSTs:1)
- Curtanaerobium respiraculi (isolates:2; rSTs:1)
- Denitrobacterium (isolates:2; rSTs:1)
- Denitrobacterium detoxificans (isolates:2; rSTs:1)
- Eggerthella (isolates:128; rSTs:86 tree)
- Ellagibacter (isolates:1; rSTs:1)
- Ellagibacter isourolithinifaciens (isolates:1; rSTs:1)
- Enterorhabdus (isolates:1; rSTs:1)
- Enterorhabdus sp. (isolates:1; rSTs:1)
- Enteroscipio (isolates:2; rSTs:1)
- Enteroscipio rubneri (isolates:2; rSTs:1)
- Gordonibacter (isolates:26; rSTs:17 tree)
- Hugonella (isolates:1; rSTs:1)
- Hugonella massiliensis (isolates:1; rSTs:1)
- Paraeggerthella (isolates:4; rSTs:4 tree)
- Phoenicibacter (isolates:2; rSTs:1)
- Phoenicibacter congonensis (isolates:2; rSTs:1)
- Raoultibacter (isolates:5; rSTs:4 tree)
- Rubneribacter (isolates:1; rSTs:1)
- Rubneribacter badeniensis (isolates:1; rSTs:1)
- Slackia (isolates:22; rSTs:13 tree)
- Xiamenia (isolates:3; rSTs:2)
- Xiamenia xianingshaonis (isolates:3; rSTs:2)
- Adlercreutzia (isolates:34; rSTs:31 tree)
- Eggerthellaceae (isolates:241; rSTs:170 tree)
- Nitriliruptoria (isolates:9; rSTs:7 tree)
- Rubrobacteria (isolates:13; rSTs:10 tree)
- Rubrobacterales (isolates:13; rSTs:10 tree)
- Rubrobacteraceae (isolates:13; rSTs:10 tree)
- Rubrobacter (isolates:13; rSTs:10 tree)
- Rubrobacter aplysinae (isolates:1; rSTs:1)
- Rubrobacter calidifluminis (isolates:1; rSTs:1)
- Rubrobacter indicoceani (isolates:1; rSTs:1)
- Rubrobacter marinus (isolates:1)
- Rubrobacter naiadicus (isolates:1; rSTs:1)
- Rubrobacter radiotolerans (isolates:3; rSTs:1)
- Rubrobacter taiwanensis (isolates:1; rSTs:1)
- Rubrobacter tropicus (isolates:1; rSTs:1)
- Rubrobacter xylanophilus (isolates:3; rSTs:3 tree)
- Rubrobacter (isolates:13; rSTs:10 tree)
- Rubrobacteraceae (isolates:13; rSTs:10 tree)
- Rubrobacterales (isolates:13; rSTs:10 tree)
- Thermoleophilia (isolates:31; rSTs:17 tree)
- Gaiellales (isolates:1; rSTs:1)
- Miltoncostaeales (isolates:2; rSTs:2)
- Solirubrobacterales (isolates:27; rSTs:13 tree)
- Thermoleophilales (isolates:1; rSTs:1)
- Acidimicrobiia (isolates:21; rSTs:19 tree)
- Aquificota (isolates:39; rSTs:29 tree)
- Aquificae (isolates:39; rSTs:29 tree)
- Aquificales (isolates:29; rSTs:19 tree)
- Aquificaceae (isolates:17; rSTs:10 tree)
- Hydrogenothermaceae (isolates:12; rSTs:9 tree)
- Desulfurobacteriales (isolates:10; rSTs:10 tree)
- Aquificales (isolates:29; rSTs:19 tree)
- Aquificae (isolates:39; rSTs:29 tree)
- Armatimonadota (isolates:7; rSTs:6 tree)
- Atribacterota (isolates:3; rSTs:3 tree)
- Bacillota (isolates:318021; rSTs:85704)
- Bacilli (isolates:289418; rSTs:79529)
- Bacillales (isolates:169673; rSTs:41331)
- Abyssicoccaceae (isolates:1; rSTs:1)
- Alicyclobacillaceae (isolates:68; rSTs:58 tree)
- Alicyclobacillus (isolates:44; rSTs:40 tree)
- Alicyclobacillus acidiphilus (isolates:2; rSTs:1)
- Alicyclobacillus acidocaldarius (isolates:1; rSTs:1)
- Alicyclobacillus acidoterrestris (isolates:2; rSTs:1)
- Alicyclobacillus cellulosilyticus (isolates:2; rSTs:1)
- Alicyclobacillus contaminans (isolates:1; rSTs:1)
- Alicyclobacillus curvatus (isolates:1; rSTs:1)
- Alicyclobacillus cycloheptanicus (isolates:2; rSTs:1)
- Alicyclobacillus dauci (isolates:1; rSTs:1)
- Alicyclobacillus fastidiosus (isolates:3; rSTs:2)
- Alicyclobacillus ferrooxydans (isolates:1; rSTs:1)
- Alicyclobacillus fructus (isolates:2; rSTs:1)
- Alicyclobacillus herbarius (isolates:1; rSTs:1)
- Alicyclobacillus hesperidum (isolates:3; rSTs:3 tree)
- Alicyclobacillus kakegawensis (isolates:1; rSTs:1)
- Alicyclobacillus macrosporangiidus (isolates:2; rSTs:2)
- Alicyclobacillus mali (isolates:4; rSTs:4 tree)
- Alicyclobacillus mengziensis (isolates:1; rSTs:1)
- Alicyclobacillus montanus (isolates:1; rSTs:1)
- Alicyclobacillus pomorum (isolates:1; rSTs:1)
- Alicyclobacillus sacchari (isolates:2; rSTs:2)
- Alicyclobacillus sendaiensis (isolates:3; rSTs:3 tree)
- Alicyclobacillus shizuokensis (isolates:1; rSTs:1)
- Alicyclobacillus sp. (isolates:1; rSTs:3 tree)
- Alicyclobacillus suci (isolates:2; rSTs:2)
- Alicyclobacillus tengchongensis (isolates:1; rSTs:1)
- Alicyclobacillus tolerans (isolates:1; rSTs:1)
- Alicyclobacillus vulcanalis (isolates:1; rSTs:1)
- Collibacillus (isolates:1; rSTs:1)
- Collibacillus ludicampi (isolates:1; rSTs:1)
- Effusibacillus (isolates:4; rSTs:3 tree)
- Ferroacidibacillus (isolates:4; rSTs:2)
- Ferroacidibacillus organovorans (isolates:4; rSTs:2)
- Kyrpidia (isolates:6; rSTs:4 tree)
- Sulfoacidibacillus (isolates:2; rSTs:2)
- Tumebacillus (isolates:7; rSTs:6 tree)
- Tumebacillus algifaecis (isolates:1; rSTs:1)
- Tumebacillus amylolyticus (isolates:1; rSTs:1)
- Tumebacillus avium (isolates:1; rSTs:1)
- Tumebacillus flagellatus (isolates:1; rSTs:1)
- Tumebacillus lacus (isolates:1)
- Tumebacillus permanentifrigoris (isolates:1; rSTs:1)
- Tumebacillus sp. (isolates:1; rSTs:1)
- Alicyclobacillus (isolates:44; rSTs:40 tree)
- Bacillaceae (isolates:10309; rSTs:5743)
- Aeribacillus (isolates:7; rSTs:6 tree)
- Aliibacillus (isolates:1; rSTs:1)
- Aliibacillus thermotolerans (isolates:1; rSTs:1)
- Alkalibacillus (isolates:7; rSTs:7 tree)
- Alkalicoccobacillus (isolates:5; rSTs:4 tree)
- Alkalicoccus (isolates:6; rSTs:6 tree)
- Alkalihalobacillus (isolates:16; rSTs:11 tree)
- Alkalihalobacillus alcalophilus (isolates:3; rSTs:1)
- Alkalihalobacillus algicola (isolates:1; rSTs:1)
- Alkalihalobacillus deserti (isolates:1; rSTs:1)
- Alkalihalobacillus hemicentroti (isolates:2; rSTs:1)
- Alkalihalobacillus macyae (isolates:2; rSTs:2)
- Alkalihalobacillus pseudalcaliphilus (isolates:2; rSTs:1)
- Alkalihalobacillus sp. (isolates:3; rSTs:3 tree)
- Alkalihalobacillus trypoxylicola (isolates:2; rSTs:1)
- Alkalihalobacterium (isolates:4; rSTs:4 tree)
- Alkalihalophilus (isolates:8; rSTs:7 tree)
- Allobacillus (isolates:5; rSTs:4 tree)
- Alteribacillus (isolates:5; rSTs:4 tree)
- Alteribacter (isolates:6; rSTs:6 tree)
- Amphibacillus (isolates:6; rSTs:6 tree)
- Anaerobacillus (isolates:6; rSTs:6 tree)
- Anoxybacillus (isolates:55; rSTs:50 tree)
- Anoxybacillus amylolyticus (isolates:1; rSTs:1)
- Anoxybacillus ayderensis (isolates:6; rSTs:6 tree)
- Anoxybacillus caldiproteolyticus (isolates:3; rSTs:3 tree)
- Anoxybacillus calidus (isolates:1; rSTs:1)
- Anoxybacillus flavithermus (isolates:2; rSTs:2)
- Anoxybacillus gonensis (isolates:5; rSTs:3 tree)
- Anoxybacillus kestanbolensis (isolates:2; rSTs:2)
- Anoxybacillus mongoliensis (isolates:1; rSTs:1)
- Anoxybacillus pushchinoensis (isolates:1; rSTs:1)
- Anoxybacillus rupiensis (isolates:5; rSTs:5 tree)
- Anoxybacillus sp. (isolates:20; rSTs:19 tree)
- Anoxybacillus suryakundensis (isolates:2; rSTs:1)
- Anoxybacillus tengchongensis (isolates:1; rSTs:1)
- Anoxybacillus tepidamans (isolates:1; rSTs:1)
- Anoxybacillus thermarum (isolates:1; rSTs:1)
- Anoxybacillus vitaminiphilus (isolates:1; rSTs:1)
- Anoxybacillus voinovskiensis (isolates:2; rSTs:1)
- Aquibacillus (isolates:9; rSTs:7 tree)
- Aquibacillus albus (isolates:1; rSTs:1)
- Aquibacillus halophilus (isolates:1; rSTs:1)
- Aquibacillus kalidii (isolates:1; rSTs:1)
- Aquibacillus koreensis (isolates:2; rSTs:1)
- Aquibacillus rhizosphaerae (isolates:1)
- Aquibacillus saliphilus (isolates:1; rSTs:1)
- Aquibacillus salsiterrae (isolates:1; rSTs:1)
- Aquibacillus sediminis (isolates:1; rSTs:1)
- Aquisalibacillus (isolates:1; rSTs:1)
- Aquisalibacillus elongatus (isolates:1; rSTs:1)
- Aureibacillus (isolates:1; rSTs:1)
- Aureibacillus halotolerans (isolates:1; rSTs:1)
- Bacillus (isolates:8102; rSTs:3992)
- Bacillus aerolatus (isolates:1; rSTs:1)
- Bacillus albus (isolates:28; rSTs:12 tree)
- Bacillus alkalicellulosilyticus (isolates:1; rSTs:1)
- Bacillus alkalicola (isolates:1; rSTs:1)
- Bacillus alkalisoli (isolates:1)
- Bacillus altitudinis (isolates:196; rSTs:137 tree)
- Bacillus alveayuensis (isolates:1; rSTs:1)
- Bacillus amyloliquefaciens (isolates:104; rSTs:22 tree)
- Bacillus andreraoultii (isolates:3; rSTs:1)
- Bacillus anthracis (isolates:792; rSTs:80 tree)
- Bacillus aquiflavi (isolates:3; rSTs:2)
- Bacillus arachidis (isolates:2; rSTs:2)
- Bacillus atrophaeus (isolates:165; rSTs:71 tree)
- Bacillus australimaris (isolates:2; rSTs:1)
- Bacillus badius (isolates:12; rSTs:7 tree)
- Bacillus benzoevorans (isolates:1; rSTs:1)
- Bacillus bingmayongensis (isolates:2; rSTs:2)
- Bacillus cabrialesii (isolates:5; rSTs:4 tree)
- Bacillus canaveralius (isolates:3; rSTs:2)
- Bacillus capparidis (isolates:2; rSTs:1)
- Bacillus cereus (isolates:1067; rSTs:453 tree)
- Bacillus changyiensis (isolates:2; rSTs:2)
- Bacillus cihuensis (isolates:1; rSTs:1)
- Bacillus clarus (isolates:2; rSTs:1)
- Bacillus coahuilensis (isolates:3; rSTs:2)
- Bacillus cytotoxicus (isolates:41; rSTs:12 tree)
- Bacillus dakarensis (isolates:1; rSTs:1)
- Bacillus dicomae (isolates:1; rSTs:1)
- Bacillus ectoiniformans (isolates:1; rSTs:1)
- Bacillus fonticola (isolates:1; rSTs:1)
- Bacillus freudenreichii (isolates:1; rSTs:1)
- Bacillus fungorum (isolates:1; rSTs:1)
- Bacillus gaemokensis (isolates:2; rSTs:1)
- Bacillus glycinifermentans (isolates:15; rSTs:9 tree)
- Bacillus gobiensis (isolates:1; rSTs:1)
- Bacillus haikouensis (isolates:1)
- Bacillus halotolerans (isolates:68; rSTs:61 tree)
- Bacillus haynesii (isolates:117; rSTs:75 tree)
- Bacillus hominis (isolates:4; rSTs:4 tree)
- Bacillus horti (isolates:1; rSTs:1)
- Bacillus inaquosorum (isolates:120; rSTs:67 tree)
- Bacillus infantis (isolates:13; rSTs:12 tree)
- Bacillus kexueae (isolates:1; rSTs:1)
- Bacillus kwashiorkori (isolates:1)
- Bacillus licheniformis (isolates:343; rSTs:119 tree)
- Bacillus litorisediminis (isolates:2; rSTs:2)
- Bacillus luti (isolates:7; rSTs:4 tree)
- Bacillus manliponensis (isolates:1; rSTs:1)
- Bacillus marasmi (isolates:1; rSTs:1)
- Bacillus marinisedimentorum (isolates:1; rSTs:1)
- Bacillus massiliglaciei (isolates:1; rSTs:1)
- Bacillus massiliigorillae (isolates:1; rSTs:1)
- Bacillus massilioanorexius (isolates:1; rSTs:1)
- Bacillus massilionigeriensis (isolates:2; rSTs:1)
- Bacillus mediterraneensis (isolates:1; rSTs:1)
- Bacillus mesophilus (isolates:2; rSTs:1)
- Bacillus methanolicus (isolates:5; rSTs:4 tree)
- Bacillus mexicanus (isolates:1; rSTs:1)
- Bacillus mobilis (isolates:40; rSTs:22 tree)
- Bacillus mojavensis (isolates:38; rSTs:25 tree)
- Bacillus mycoides (isolates:159; rSTs:113 tree)
- Bacillus nakamurai (isolates:5; rSTs:4 tree)
- Bacillus ndiopicus (isolates:1; rSTs:1)
- Bacillus niameyensis (isolates:1; rSTs:1)
- Bacillus nitratireducens (isolates:14; rSTs:9 tree)
- Bacillus norwichensis (isolates:1; rSTs:1)
- Bacillus oleivorans (isolates:1; rSTs:1)
- Bacillus pacificus (isolates:89; rSTs:22 tree)
- Bacillus pakistanensis (isolates:1; rSTs:1)
- Bacillus paralicheniformis (isolates:211; rSTs:95 tree)
- Bacillus paramobilis (isolates:3; rSTs:3)
- Bacillus paramycoides (isolates:17; rSTs:12 tree)
- Bacillus paranthracis (isolates:228; rSTs:84 tree)
- Bacillus pinisoli (isolates:1; rSTs:1)
- Bacillus proteolyticus (isolates:2; rSTs:2)
- Bacillus pseudomycoides (isolates:126; rSTs:59 tree)
- Bacillus pumilus (isolates:231; rSTs:101 tree)
- Bacillus renqingensis (isolates:1; rSTs:1)
- Bacillus rhizoplanae (isolates:1; rSTs:1)
- Bacillus rubiinfantis (isolates:2; rSTs:1)
- Bacillus rugosus (isolates:3; rSTs:3)
- Bacillus safensis (isolates:212; rSTs:140 tree)
- Bacillus salacetis (isolates:1; rSTs:1)
- Bacillus salipaludis (isolates:3; rSTs:3)
- Bacillus sanguinis (isolates:1; rSTs:1)
- Bacillus shivajii (isolates:1; rSTs:1)
- Bacillus siamensis (isolates:19; rSTs:13 tree)
- Bacillus sinesaloumensis (isolates:1; rSTs:1)
- Bacillus smithii (isolates:11; rSTs:8 tree)
- Bacillus solimangrovi (isolates:1; rSTs:1)
- Bacillus solitudinis (isolates:1; rSTs:1)
- Bacillus sonorensis (isolates:36; rSTs:21 tree)
- Bacillus sp. (isolates:537; rSTs:790 tree)
- Bacillus spizizenii (isolates:169; rSTs:47 tree)
- Bacillus stercoris (isolates:14; rSTs:14 tree)
- Bacillus suaedae (isolates:1; rSTs:1)
- Bacillus suaedaesalsae (isolates:1; rSTs:1)
- Bacillus subtilis (isolates:832; rSTs:342 tree)
- Bacillus swezeyi (isolates:14; rSTs:8 tree)
- Bacillus taeanensis (isolates:1; rSTs:1)
- Bacillus tequilensis (isolates:4; rSTs:3 tree)
- Bacillus testis (isolates:2; rSTs:1)
- Bacillus thermotolerans (isolates:4; rSTs:3 tree)
- Bacillus thuringiensis (isolates:530; rSTs:223 tree)
- Bacillus tianshenii (isolates:2; rSTs:2)
- Bacillus timonensis (isolates:2; rSTs:1)
- Bacillus toyonensis (isolates:333; rSTs:131 tree)
- Bacillus tropicus (isolates:54; rSTs:33 tree)
- Bacillus tuaregi (isolates:2; rSTs:1)
- Bacillus vallismortis (isolates:17; rSTs:13 tree)
- Bacillus velezensis (isolates:718; rSTs:257 tree)
- Bacillus weihaiensis (isolates:1; rSTs:1)
- Bacillus wiedmannii (isolates:228; rSTs:157 tree)
- Bacillus wudalianchiensis (isolates:1; rSTs:1)
- Bacillus xiamenensis (isolates:5; rSTs:4 tree)
- Bacillus xiapuensis (isolates:1; rSTs:1)
- Bacillus yapensis (isolates:2; rSTs:1)
- Bacillus zhangzhouensis (isolates:4; rSTs:4 tree)
- Caldalkalibacillus (isolates:6; rSTs:6 tree)
- Caldibacillus (isolates:14; rSTs:13 tree)
- Caldifermentibacillus (isolates:6; rSTs:6 tree)
- Calditerricola (isolates:2; rSTs:1)
- Calditerricola satsumensis (isolates:2; rSTs:1)
- Calidifontibacillus (isolates:2; rSTs:2)
- Cerasibacillus (isolates:3; rSTs:2)
- Compostibacillus (isolates:1; rSTs:1)
- Compostibacillus humi (isolates:1; rSTs:1)
- Cytobacillus (isolates:85; rSTs:64 tree)
- Cytobacillus citreus (isolates:1; rSTs:1)
- Cytobacillus dafuensis (isolates:1; rSTs:1)
- Cytobacillus depressus (isolates:1; rSTs:1)
- Cytobacillus eiseniae (isolates:1; rSTs:1)
- Cytobacillus firmus (isolates:43; rSTs:27 tree)
- Cytobacillus gottheilii (isolates:4; rSTs:4 tree)
- Cytobacillus horneckiae (isolates:5; rSTs:3)
- Cytobacillus kochii (isolates:7; rSTs:7 tree)
- Cytobacillus luteolus (isolates:2; rSTs:1)
- Cytobacillus massiliigabonensis (isolates:1; rSTs:1)
- Cytobacillus oceanisediminis (isolates:2; rSTs:2)
- Cytobacillus praedii (isolates:4; rSTs:4)
- Cytobacillus purgationiresistens (isolates:1; rSTs:1)
- Cytobacillus solani (isolates:3; rSTs:3 tree)
- Cytobacillus sp. (isolates:6; rSTs:5 tree)
- Cytobacillus spongiae (isolates:1)
- Cytobacillus stercorigallinarum (isolates:1; rSTs:1)
- Cytobacillus suaedae (isolates:1; rSTs:1)
- Desertibacillus (isolates:1; rSTs:1)
- Desertibacillus haloalkaliphilus (isolates:1; rSTs:1)
- Domibacillus (isolates:15; rSTs:13 tree)
- Domibacillus aminovorans (isolates:2; rSTs:2)
- Domibacillus antri (isolates:1; rSTs:1)
- Domibacillus enclensis (isolates:3; rSTs:1)
- Domibacillus epiphyticus (isolates:1; rSTs:1)
- Domibacillus indicus (isolates:1; rSTs:1)
- Domibacillus iocasae (isolates:1; rSTs:1)
- Domibacillus mangrovi (isolates:1; rSTs:1)
- Domibacillus robiginosus (isolates:1; rSTs:1)
- Domibacillus sp. (isolates:3; rSTs:3 tree)
- Domibacillus tundrae (isolates:1; rSTs:1)
- Ectobacillus (isolates:7; rSTs:6 tree)
- Edaphobacillus (isolates:1; rSTs:1)
- Edaphobacillus lindanitolerans (isolates:1; rSTs:1)
- Evansella (isolates:10; rSTs:7 tree)
- Falsibacillus (isolates:2; rSTs:2)
- Fervidibacillus (isolates:2; rSTs:2)
- Fictibacillus (isolates:32; rSTs:34 tree)
- Fictibacillus aquaticus (isolates:1; rSTs:1)
- Fictibacillus arsenicus (isolates:2; rSTs:2)
- Fictibacillus barbaricus (isolates:2; rSTs:1)
- Fictibacillus enclensis (isolates:5; rSTs:4 tree)
- Fictibacillus fluitans (isolates:1)
- Fictibacillus gelatini (isolates:1; rSTs:1)
- Fictibacillus halophilus (isolates:1; rSTs:1)
- Fictibacillus macauensis (isolates:1; rSTs:1)
- Fictibacillus marinisediminis (isolates:1; rSTs:1)
- Fictibacillus nanhaiensis (isolates:1; rSTs:1)
- Fictibacillus norfolkensis (isolates:1; rSTs:1)
- Fictibacillus phosphorivorans (isolates:1; rSTs:1)
- Fictibacillus solisalsi (isolates:1; rSTs:1)
- Fictibacillus sp. (isolates:12; rSTs:18 tree)
- Fictibacillus terranigra (isolates:1)
- Filobacillus (isolates:1; rSTs:1)
- Filobacillus milosensis (isolates:1; rSTs:1)
- Fredinandcohnia (isolates:5; rSTs:6 tree)
- Geobacillus (isolates:133; rSTs:104 tree)
- Geobacillus genomosp. 3 (isolates:1; rSTs:1)
- Geobacillus icigianus (isolates:1; rSTs:1)
- Geobacillus jurassicus (isolates:1; rSTs:1)
- Geobacillus kaustophilus (isolates:4; rSTs:4 tree)
- Geobacillus lituanicus (isolates:1; rSTs:1)
- Geobacillus proteiniphilus (isolates:2; rSTs:2)
- Geobacillus sp. (isolates:33; rSTs:33 tree)
- Geobacillus stearothermophilus (isolates:51; rSTs:31 tree)
- Geobacillus subterraneus (isolates:5; rSTs:4 tree)
- Geobacillus thermocatenulatus (isolates:3; rSTs:2)
- Geobacillus thermodenitrificans (isolates:14; rSTs:11 tree)
- Geobacillus thermoleovorans (isolates:9; rSTs:7 tree)
- Geobacillus vulcani (isolates:1; rSTs:1)
- Geobacillus zalihae (isolates:6; rSTs:4 tree)
- [Bacillus] caldolyticus (isolates:1; rSTs:1)
- Gottfriedia (isolates:14; rSTs:12 tree)
- Gracilibacillus (isolates:24; rSTs:21 tree)
- Gracilibacillus alcaliphilus (isolates:1; rSTs:1)
- Gracilibacillus boraciitolerans (isolates:1; rSTs:1)
- Gracilibacillus caseinilyticus (isolates:1; rSTs:1)
- Gracilibacillus dipsosauri (isolates:1; rSTs:1)
- Gracilibacillus halophilus (isolates:1; rSTs:1)
- Gracilibacillus halotolerans (isolates:1; rSTs:1)
- Gracilibacillus kekensis (isolates:1; rSTs:1)
- Gracilibacillus lacisalsi (isolates:1; rSTs:1)
- Gracilibacillus massiliensis (isolates:2; rSTs:1)
- Gracilibacillus orientalis (isolates:1; rSTs:1)
- Gracilibacillus oryzae (isolates:1; rSTs:1)
- Gracilibacillus salinarum (isolates:1; rSTs:1)
- Gracilibacillus saliphilus (isolates:1; rSTs:1)
- Gracilibacillus salitolerans (isolates:1; rSTs:1)
- Gracilibacillus sp. (isolates:3; rSTs:3 tree)
- Gracilibacillus suaedae (isolates:1; rSTs:1)
- Gracilibacillus thailandensis (isolates:2; rSTs:1)
- Gracilibacillus timonensis (isolates:2; rSTs:1)
- Gracilibacillus ureilyticus (isolates:1; rSTs:1)
- Halalkalibacillus (isolates:2; rSTs:2)
- Halalkalibacter (isolates:15; rSTs:14 tree)
- Halalkalibacter akibai (isolates:1; rSTs:1)
- Halalkalibacter alkaliphilus (isolates:1; rSTs:1)
- Halalkalibacter alkalisediminis (isolates:1; rSTs:1)
- Halalkalibacter hemicellulosilyticus (isolates:1; rSTs:1)
- Halalkalibacter krulwichiae (isolates:2; rSTs:1)
- Halalkalibacter nanhaiisediminis (isolates:1; rSTs:1)
- Halalkalibacter oceani (isolates:2; rSTs:2)
- Halalkalibacter okhensis (isolates:1; rSTs:1)
- Halalkalibacter sp. (isolates:3; rSTs:3)
- Halalkalibacter urbisdiaboli (isolates:1; rSTs:1)
- Halalkalibacter wakoensis (isolates:1; rSTs:1)
- Halalkalibacterium (ex Joshi et al. 2022) (isolates:20; rSTs:12 tree)
- Halobacillus (isolates:45; rSTs:40 tree)
- Halobacillus aidingensis (isolates:1; rSTs:1)
- Halobacillus alkaliphilus (isolates:1; rSTs:1)
- Halobacillus amylolyticus (isolates:1; rSTs:1)
- Halobacillus andaensis (isolates:2; rSTs:1)
- Halobacillus campisalis (isolates:1; rSTs:1)
- Halobacillus dabanensis (isolates:1; rSTs:1)
- Halobacillus faecis (isolates:1; rSTs:1)
- Halobacillus fulvus (isolates:1; rSTs:1)
- Halobacillus halophilus (isolates:2; rSTs:1)
- Halobacillus hunanensis (isolates:1; rSTs:1)
- Halobacillus ihumii (isolates:1; rSTs:1)
- Halobacillus karajensis (isolates:4; rSTs:2)
- Halobacillus kuroshimensis (isolates:2; rSTs:2)
- Halobacillus litoralis (isolates:2; rSTs:2)
- Halobacillus locisalis (isolates:1; rSTs:1)
- Halobacillus mangrovi (isolates:1; rSTs:1)
- Halobacillus massiliensis (isolates:1; rSTs:1)
- Halobacillus naozhouensis (isolates:1; rSTs:1)
- Halobacillus salinarum (isolates:1; rSTs:1)
- Halobacillus salinus (isolates:2; rSTs:2)
- Halobacillus seohaensis (isolates:1; rSTs:1)
- Halobacillus shinanisalinarum (isolates:1; rSTs:1)
- Halobacillus sp. (isolates:12; rSTs:12 tree)
- Halobacillus trueperi (isolates:1; rSTs:1)
- Halobacillus yeomjeoni (isolates:2; rSTs:1)
- Halolactibacillus (isolates:8; rSTs:3 tree)
- Heyndrickxia (isolates:143; rSTs:83 tree)
- Heyndrickxia acidicola (isolates:2; rSTs:1)
- Heyndrickxia acidiproducens (isolates:2; rSTs:1)
- Heyndrickxia camelliae (isolates:1; rSTs:1)
- Heyndrickxia coagulans (isolates:67; rSTs:41 tree)
- Heyndrickxia ginsengihumi (isolates:4; rSTs:4 tree)
- Heyndrickxia oleronia (isolates:7; rSTs:6 tree)
- Heyndrickxia shackletonii (isolates:2; rSTs:1)
- Heyndrickxia sporothermodurans (isolates:43; rSTs:14 tree)
- Heyndrickxia vini (isolates:1; rSTs:1)
- Weizmannia acidilactici (isolates:3; rSTs:3 tree)
- Weizmannia agrestimuris (isolates:1; rSTs:1)
- Weizmannia sp. (isolates:10; rSTs:9)
- Lederbergia (isolates:16; rSTs:14 tree)
- Lederbergia citrea (isolates:3; rSTs:3 tree)
- Lederbergia citri (isolates:1; rSTs:1)
- Lederbergia citrisecunda (isolates:1; rSTs:1)
- Lederbergia galactosidilytica (isolates:2; rSTs:2)
- Lederbergia lenta (isolates:4; rSTs:3 tree)
- Lederbergia panacisoli (isolates:1; rSTs:1)
- Lederbergia ruris (isolates:1; rSTs:1)
- Lederbergia sp. (isolates:1; rSTs:1)
- Lederbergia wuyishanensis (isolates:2; rSTs:1)
- Lentibacillus (isolates:13; rSTs:13 tree)
- Lentibacillus amyloliquefaciens (isolates:1; rSTs:1)
- Lentibacillus cibarius (isolates:2; rSTs:2)
- Lentibacillus halodurans (isolates:1; rSTs:1)
- Lentibacillus jeotgali (isolates:1; rSTs:1)
- Lentibacillus juripiscarius (isolates:1; rSTs:1)
- Lentibacillus kapialis (isolates:1; rSTs:1)
- Lentibacillus lipolyticus (isolates:1; rSTs:1)
- Lentibacillus persicus (isolates:1; rSTs:1)
- Lentibacillus salicampi (isolates:1; rSTs:1)
- Lentibacillus saliphilus (isolates:1; rSTs:1)
- Lentibacillus sediminis (isolates:1; rSTs:1)
- Lentibacillus sp. (isolates:1; rSTs:1)
- Litchfieldia (isolates:2; rSTs:2)
- Litoribacterium (isolates:1; rSTs:1)
- Litoribacterium kuwaitense (isolates:1; rSTs:1)
- Lottiidibacillus (isolates:1; rSTs:1)
- Lottiidibacillus patelloidae (isolates:1; rSTs:1)
- Lysinibacillus (isolates:167; rSTs:121 tree)
- Lysinibacillus agricola (isolates:1; rSTs:1)
- Lysinibacillus alkalisoli (isolates:1; rSTs:1)
- Lysinibacillus boronitolerans (isolates:5; rSTs:4 tree)
- Lysinibacillus capsici (isolates:24; rSTs:17 tree)
- Lysinibacillus cavernae (isolates:1; rSTs:1)
- Lysinibacillus composti (isolates:2; rSTs:1)
- Lysinibacillus contaminans (isolates:1)
- Lysinibacillus endophyticus (isolates:2; rSTs:2)
- Lysinibacillus fusiformis (isolates:39; rSTs:28 tree)
- Lysinibacillus halotolerans (isolates:1; rSTs:1)
- Lysinibacillus irui (isolates:5; rSTs:3 tree)
- Lysinibacillus macroides (isolates:2; rSTs:1)
- Lysinibacillus mangiferihumi (isolates:2; rSTs:1)
- Lysinibacillus odysseyi (isolates:3; rSTs:1)
- Lysinibacillus pakistanensis (isolates:5; rSTs:3 tree)
- Lysinibacillus parviboronicapiens (isolates:3; rSTs:2)
- Lysinibacillus sp. (isolates:49; rSTs:41 tree)
- Lysinibacillus sphaericus (isolates:9; rSTs:4 tree)
- Lysinibacillus tabacifolii (isolates:2; rSTs:1)
- Lysinibacillus telephonicus (isolates:1; rSTs:1)
- Lysinibacillus timonensis (isolates:1; rSTs:1)
- Lysinibacillus varians (isolates:2; rSTs:1)
- Lysinibacillus xylanilyticus (isolates:5; rSTs:4 tree)
- Lysinibacillus yapensis (isolates:1; rSTs:1)
- Mangrovibacillus (isolates:1; rSTs:1)
- Mangrovibacillus cuniculi (isolates:1; rSTs:1)
- Marinococcus (isolates:7; rSTs:6 tree)
- Massilibacterium (isolates:2; rSTs:1)
- Massilibacterium senegalense (isolates:2; rSTs:1)
- Melghiribacillus (isolates:1; rSTs:1)
- Melghiribacillus thermohalophilus (isolates:1; rSTs:1)
- Mesobacillus (isolates:23; rSTs:21 tree)
- Mesobacillus boroniphilus (isolates:1; rSTs:1)
- Mesobacillus campisalis (isolates:1; rSTs:1)
- Mesobacillus foraminis (isolates:4; rSTs:3 tree)
- Mesobacillus harenae (isolates:1; rSTs:1)
- Mesobacillus jeotgali (isolates:3; rSTs:3 tree)
- Mesobacillus maritimus (isolates:1; rSTs:1)
- Mesobacillus persicus (isolates:1; rSTs:1)
- Mesobacillus selenatarsenatis (isolates:1; rSTs:1)
- Mesobacillus sp. (isolates:4; rSTs:5 tree)
- Mesobacillus stamsii (isolates:1; rSTs:1)
- Mesobacillus subterraneus (isolates:1; rSTs:1)
- Mesobacillus zeae (isolates:4; rSTs:2)
- Metabacillus (isolates:43; rSTs:42 tree)
- Metabacillus arenae (isolates:1; rSTs:1)
- Metabacillus bambusae (isolates:1; rSTs:1)
- Metabacillus crassostreae (isolates:1; rSTs:1)
- Metabacillus dongyingensis (isolates:1; rSTs:1)
- Metabacillus endolithicus (isolates:1; rSTs:1)
- Metabacillus fastidiosus (isolates:6; rSTs:5)
- Metabacillus flavus (isolates:1; rSTs:1)
- Metabacillus halosaccharovorans (isolates:4; rSTs:4 tree)
- Metabacillus idriensis (isolates:7; rSTs:6 tree)
- Metabacillus indicus (isolates:4; rSTs:4 tree)
- Metabacillus iocasae (isolates:1; rSTs:1)
- Metabacillus kandeliae (isolates:1; rSTs:1)
- Metabacillus lacus (isolates:1; rSTs:1)
- Metabacillus litoralis (isolates:1; rSTs:1)
- Metabacillus malikii (isolates:1; rSTs:1)
- Metabacillus mangrovi (isolates:1; rSTs:1)
- Metabacillus niabensis (isolates:2; rSTs:1)
- Metabacillus rhizolycopersici (isolates:1; rSTs:1)
- Metabacillus schmidteae (isolates:1; rSTs:1)
- Metabacillus sediminilitoris (isolates:2; rSTs:1)
- Metabacillus sp. (isolates:4; rSTs:7 tree)
- Microaerobacter (isolates:1; rSTs:1)
- Microaerobacter geothermalis (isolates:1; rSTs:1)
- Natribacillus (isolates:1; rSTs:1)
- Natribacillus halophilus (isolates:1; rSTs:1)
- Natronobacillus (isolates:1; rSTs:1)
- Natronobacillus azotifigens (isolates:1; rSTs:1)
- Neobacillus (isolates:77; rSTs:68 tree)
- Neobacillus bataviensis (isolates:1; rSTs:1)
- Neobacillus citreus (isolates:1; rSTs:1)
- Neobacillus cucumis (isolates:1; rSTs:1)
- Neobacillus dielmonensis (isolates:1; rSTs:1)
- Neobacillus drentensis (isolates:14; rSTs:12)
- Neobacillus endophyticus (isolates:1; rSTs:1)
- Neobacillus fumarioli (isolates:1; rSTs:1)
- Neobacillus ginsengisoli (isolates:1; rSTs:1)
- Neobacillus jeddahensis (isolates:3; rSTs:1)
- Neobacillus kokaensis (isolates:1; rSTs:1)
- Neobacillus massiliamazoniensis (isolates:1; rSTs:1)
- Neobacillus mesonae (isolates:4; rSTs:4 tree)
- Neobacillus muris (isolates:1; rSTs:1)
- Neobacillus niacini (isolates:12; rSTs:10 tree)
- Neobacillus notoginsengisoli (isolates:1; rSTs:1)
- Neobacillus novalis (isolates:3; rSTs:1)
- Neobacillus piezotolerans (isolates:1; rSTs:1)
- Neobacillus rhizophilus (isolates:1; rSTs:1)
- Neobacillus rhizosphaerae (isolates:1; rSTs:1)
- Neobacillus sedimentimangrovi (isolates:2; rSTs:2)
- Neobacillus soli (isolates:2; rSTs:1)
- Neobacillus sp. (isolates:17; rSTs:19 tree)
- Neobacillus terrae (isolates:1; rSTs:1)
- Neobacillus thermocopriae (isolates:3; rSTs:2)
- Neobacillus vireti (isolates:2; rSTs:1)
- Niallia (isolates:44; rSTs:38 tree)
- Numidum (isolates:2; rSTs:1)
- Numidum massiliense (isolates:2; rSTs:1)
- Oceanobacillus (isolates:67; rSTs:58 tree)
- Oceanobacillus alkalisoli (isolates:2; rSTs:2)
- Oceanobacillus arenosus (isolates:1; rSTs:1)
- Oceanobacillus bengalensis (isolates:1; rSTs:1)
- Oceanobacillus caeni (isolates:5; rSTs:5 tree)
- Oceanobacillus chungangensis (isolates:1; rSTs:1)
- Oceanobacillus damuensis (isolates:1; rSTs:1)
- Oceanobacillus halophilus (isolates:1; rSTs:1)
- Oceanobacillus halotolerans (isolates:1; rSTs:1)
- Oceanobacillus iheyensis (isolates:1; rSTs:1)
- Oceanobacillus indicireducens (isolates:1; rSTs:1)
- Oceanobacillus jeddahense (isolates:3; rSTs:2)
- Oceanobacillus jordanicus (isolates:1; rSTs:1)
- Oceanobacillus kimchii (isolates:6; rSTs:5 tree)
- Oceanobacillus limi (isolates:1; rSTs:1)
- Oceanobacillus luteolus (isolates:1; rSTs:1)
- Oceanobacillus manasiensis (isolates:1; rSTs:1)
- Oceanobacillus massiliensis (isolates:3; rSTs:2)
- Oceanobacillus neutriphilus (isolates:2; rSTs:1)
- Oceanobacillus oncorhynchi (isolates:6; rSTs:6 tree)
- Oceanobacillus picturae (isolates:4; rSTs:3 tree)
- Oceanobacillus piezotolerans (isolates:1; rSTs:1)
- Oceanobacillus polygoni (isolates:2; rSTs:1)
- Oceanobacillus profundus (isolates:4; rSTs:3 tree)
- Oceanobacillus rekensis (isolates:1; rSTs:1)
- Oceanobacillus salinisoli (isolates:1; rSTs:1)
- Oceanobacillus saliphilus (isolates:1; rSTs:1)
- Oceanobacillus senegalensis (isolates:1; rSTs:1)
- Oceanobacillus sojae (isolates:1; rSTs:1)
- Oceanobacillus sp. (isolates:10; rSTs:8 tree)
- Oceanobacillus timonensis (isolates:1; rSTs:1)
- Oceanobacillus zhaokaii (isolates:1; rSTs:1)
- Oikeobacillus (isolates:1; rSTs:1)
- Oikeobacillus pervagus (isolates:1; rSTs:1)
- Ornithinibacillus (isolates:9; rSTs:9 tree)
- Ornithinibacillus bavariensis (isolates:1; rSTs:1)
- Ornithinibacillus californiensis (isolates:1; rSTs:1)
- Ornithinibacillus caprae (isolates:1; rSTs:1)
- Ornithinibacillus contaminans (isolates:1; rSTs:1)
- Ornithinibacillus gellani (isolates:1; rSTs:1)
- Ornithinibacillus halophilus (isolates:1; rSTs:1)
- Ornithinibacillus halotolerans (isolates:1; rSTs:1)
- Ornithinibacillus massiliensis (isolates:1; rSTs:1)
- Ornithinibacillus scapharcae (isolates:1; rSTs:1)
- Paenalkalicoccus (isolates:1; rSTs:1)
- Paenalkalicoccus suaedae (isolates:1; rSTs:1)
- Pallidibacillus (isolates:4; rSTs:4 tree)
- Parageobacillus (isolates:41; rSTs:29 tree)
- Parageobacillus caldoxylosilyticus (isolates:8; rSTs:6 tree)
- Parageobacillus galactosidasius (isolates:1; rSTs:1)
- Parageobacillus genomosp. 1 (isolates:1; rSTs:1)
- Parageobacillus sp. (isolates:3; rSTs:5 tree)
- Parageobacillus thermantarcticus (isolates:1; rSTs:1)
- Parageobacillus thermoglucosidasius (isolates:19; rSTs:9 tree)
- Parageobacillus toebii (isolates:7; rSTs:5 tree)
- Parageobacillus yumthangensis (isolates:1; rSTs:1)
- Paraliobacillus (isolates:10; rSTs:8 tree)
- Paucisalibacillus (isolates:3; rSTs:3 tree)
- Pelagirhabdus (isolates:1; rSTs:1)
- Pelagirhabdus alkalitolerans (isolates:1; rSTs:1)
- Peribacillus (isolates:132; rSTs:112 tree)
- Peribacillus acanthi (isolates:1; rSTs:1)
- Peribacillus alkalitolerans (isolates:1; rSTs:1)
- Peribacillus asahii (isolates:5; rSTs:5 tree)
- Peribacillus butanolivorans (isolates:6; rSTs:6 tree)
- Peribacillus cavernae (isolates:2; rSTs:1)
- Peribacillus deserti (isolates:2; rSTs:2)
- Peribacillus faecalis (isolates:1; rSTs:1)
- Peribacillus frigoritolerans (isolates:60; rSTs:47 tree)
- Peribacillus glennii (isolates:1; rSTs:1)
- Peribacillus huizhouensis (isolates:1; rSTs:1)
- Peribacillus kribbensis (isolates:1; rSTs:1)
- Peribacillus loiseleuriae (isolates:1; rSTs:1)
- Peribacillus muralis (isolates:4; rSTs:3 tree)
- Peribacillus psychrosaccharolyticus (isolates:4; rSTs:1)
- Peribacillus saganii (isolates:1; rSTs:1)
- Peribacillus simplex (isolates:23; rSTs:21 tree)
- Peribacillus sp. (isolates:17; rSTs:17 tree)
- Peribacillus tepidiphilus (isolates:1; rSTs:1)
- Perspicuibacillus (isolates:1; rSTs:1)
- Perspicuibacillus lycopersici (isolates:1; rSTs:1)
- Piscibacillus (isolates:3; rSTs:3 tree)
- Pontibacillus (isolates:13; rSTs:11 tree)
- Pontibacillus chungwhensis (isolates:1; rSTs:1)
- Pontibacillus halophilus (isolates:2; rSTs:1)
- Pontibacillus litoralis (isolates:1; rSTs:1)
- Pontibacillus marinus (isolates:2; rSTs:1)
- Pontibacillus salipaludis (isolates:1; rSTs:1)
- Pontibacillus sp. (isolates:3; rSTs:3 tree)
- Pontibacillus yanchengensis (isolates:3; rSTs:3 tree)
- Pradoshia (isolates:2; rSTs:2)
- Priestia (isolates:425; rSTs:311 tree)
- Priestia abyssalis (isolates:1; rSTs:1)
- Priestia aryabhattai (isolates:59; rSTs:47 tree)
- Priestia endophytica (isolates:11; rSTs:10 tree)
- Priestia filamentosa (isolates:11; rSTs:7 tree)
- Priestia flexa (isolates:22; rSTs:18 tree)
- Priestia koreensis (isolates:5; rSTs:5 tree)
- Priestia megaterium (isolates:305; rSTs:210 tree)
- Priestia sp. (isolates:8; rSTs:11 tree)
- Priestia taiwanensis (isolates:2; rSTs:1)
- Priestia veravalensis (isolates:1; rSTs:1)
- Pseudalkalibacillus (isolates:12; rSTs:13 tree)
- Pseudalkalibacillus berkeleyi (isolates:1; rSTs:1)
- Pseudalkalibacillus caeni (isolates:1; rSTs:1)
- Pseudalkalibacillus decolorationis (isolates:1; rSTs:1)
- Pseudalkalibacillus hwajinpoensis (isolates:6; rSTs:7 tree)
- Pseudalkalibacillus salsuginis (isolates:1; rSTs:1)
- Pseudalkalibacillus sedimenti (isolates:1; rSTs:1)
- Pseudalkalibacillus spartinae (isolates:1; rSTs:1)
- Pseudogracilibacillus (isolates:4; rSTs:2)
- Pseudoneobacillus (isolates:1; rSTs:1)
- Pseudoneobacillus rhizosphaerae (isolates:1; rSTs:1)
- Psychrobacillus (isolates:22; rSTs:20 tree)
- Psychrobacillus antarcticus (isolates:1; rSTs:1)
- Psychrobacillus faecigallinarum (isolates:1; rSTs:1)
- Psychrobacillus glaciei (isolates:1; rSTs:1)
- Psychrobacillus insolitus (isolates:1; rSTs:1)
- Psychrobacillus lasiicapitis (isolates:2; rSTs:1)
- Psychrobacillus psychrodurans (isolates:4; rSTs:3 tree)
- Psychrobacillus psychrotolerans (isolates:1; rSTs:1)
- Psychrobacillus soli (isolates:1; rSTs:1)
- Psychrobacillus sp. (isolates:9; rSTs:9 tree)
- Psychrobacillus vulpis (isolates:1; rSTs:1)
- Pueribacillus (isolates:1; rSTs:1)
- Pueribacillus theae (isolates:1; rSTs:1)
- Radiobacillus (isolates:2; rSTs:2)
- Robertmurraya (isolates:9; rSTs:8 tree)
- Rossellomorea (isolates:35; rSTs:38 tree)
- Rubeoparvulum (isolates:2; rSTs:1)
- Rubeoparvulum massiliense (isolates:2; rSTs:1)
- Saccharococcus (isolates:1; rSTs:1)
- Saccharococcus thermophilus (isolates:1; rSTs:1)
- Salibacterium (isolates:5; rSTs:5 tree)
- Salicibibacter (isolates:4; rSTs:4 tree)
- Salimicrobium (isolates:8; rSTs:6 tree)
- Salinibacillus (isolates:2; rSTs:2)
- Salipaludibacillus (isolates:12; rSTs:9 tree)
- Salipaludibacillus agaradhaerens (isolates:5; rSTs:3 tree)
- Salipaludibacillus aurantiacus (isolates:1; rSTs:1)
- Salipaludibacillus daqingensis (isolates:1; rSTs:1)
- Salipaludibacillus keqinensis (isolates:1; rSTs:1)
- Salipaludibacillus neizhouensis (isolates:2; rSTs:1)
- Salipaludibacillus sp. (isolates:2; rSTs:2 tree)
- Salirhabdus (isolates:2; rSTs:1)
- Salirhabdus euzebyi (isolates:2; rSTs:1)
- Salisediminibacterium (isolates:6; rSTs:4 tree)
- Saliterribacillus (isolates:1; rSTs:1)
- Saliterribacillus persicus (isolates:1; rSTs:1)
- Salsuginibacillus (isolates:2; rSTs:2)
- Schinkia (isolates:21; rSTs:11)
- Schinkia azotoformans (isolates:21; rSTs:11)
- Sediminibacillus (isolates:5; rSTs:5 tree)
- Shouchella (isolates:37; rSTs:28 tree)
- Shouchella clausii (isolates:23; rSTs:15 tree)
- Shouchella lehensis (isolates:3; rSTs:2)
- Shouchella lonarensis (isolates:1; rSTs:1)
- Shouchella miscanthi (isolates:2; rSTs:2)
- Shouchella oshimensis (isolates:1; rSTs:1)
- Shouchella patagoniensis (isolates:1; rSTs:1)
- Shouchella rhizosphaerae (isolates:3; rSTs:3 tree)
- Shouchella shacheensis (isolates:1; rSTs:1)
- Shouchella tritolerans (isolates:1; rSTs:1)
- Shouchella xiaoxiensis (isolates:1; rSTs:1)
- Siminovitchia (isolates:21; rSTs:9 tree)
- Streptohalobacillus (isolates:1; rSTs:1)
- Streptohalobacillus salinus (isolates:1; rSTs:1)
- Sutcliffiella (isolates:15; rSTs:13 tree)
- Tenuibacillus (isolates:2; rSTs:1)
- Tenuibacillus multivorans (isolates:2; rSTs:1)
- Tepidibacillus (isolates:3; rSTs:3 tree)
- Terribacillus (isolates:16; rSTs:14 tree)
- Terrihalobacillus (isolates:2; rSTs:2)
- Terrihalobacillus insolitus (isolates:2; rSTs:2)
- Terrilactibacillus (isolates:3; rSTs:3 tree)
- Texcoconibacillus (isolates:1; rSTs:1)
- Texcoconibacillus texcoconensis (isolates:1; rSTs:1)
- Thalassobacillus (isolates:6; rSTs:4 tree)
- Thermolongibacillus (isolates:1; rSTs:1)
- Thermolongibacillus altinsuensis (isolates:1; rSTs:1)
- Virgibacillus (isolates:78; rSTs:55 tree)
- Virgibacillus alimentarius (isolates:2; rSTs:2)
- Virgibacillus chiguensis (isolates:1; rSTs:1)
- Virgibacillus dakarensis (isolates:3; rSTs:3 tree)
- Virgibacillus dokdonensis (isolates:3; rSTs:3)
- Virgibacillus doumboii (isolates:1; rSTs:1)
- Virgibacillus halodenitrificans (isolates:13; rSTs:12 tree)
- Virgibacillus halotolerans (isolates:1; rSTs:1)
- Virgibacillus ihumii (isolates:1; rSTs:1)
- Virgibacillus indicus (isolates:1; rSTs:1)
- Virgibacillus litoralis (isolates:1; rSTs:1)
- Virgibacillus massiliensis (isolates:4; rSTs:2)
- Virgibacillus natechei (isolates:2; rSTs:1)
- Virgibacillus ndiopensis (isolates:1; rSTs:1)
- Virgibacillus necropolis (isolates:1; rSTs:1)
- Virgibacillus oceani (isolates:1; rSTs:1)
- Virgibacillus pantothenticus (isolates:23; rSTs:5 tree)
- Virgibacillus phasianinus (isolates:1; rSTs:1)
- Virgibacillus profundi (isolates:2; rSTs:1)
- Virgibacillus proomii (isolates:2; rSTs:2)
- Virgibacillus salexigens (isolates:2; rSTs:2)
- Virgibacillus salinus (isolates:1; rSTs:1)
- Virgibacillus senegalensis (isolates:1; rSTs:1)
- Virgibacillus siamensis (isolates:1; rSTs:1)
- Virgibacillus sp. (isolates:8; rSTs:8 tree)
- Virgibacillus subterraneus (isolates:1; rSTs:1)
- Vulcanibacillus (isolates:1; rSTs:1)
- Vulcanibacillus modesticaldus (isolates:1; rSTs:1)
- Bacillales Family X. Incertae Sedis (isolates:5; rSTs:4 tree)
- Gemellaceae (isolates:36; rSTs:24 tree)
- Listeriaceae (isolates:54523; rSTs:5363)
- Brochothrix (isolates:28; rSTs:22 tree)
- Listeria (isolates:54495; rSTs:5341)
- Listeria aquatica (isolates:2; rSTs:2)
- Listeria booriae (isolates:89; rSTs:85 tree)
- Listeria cornellensis (isolates:1; rSTs:1)
- Listeria cossartiae (isolates:35; rSTs:16 tree)
- Listeria costaricensis (isolates:1; rSTs:1)
- Listeria farberi (isolates:5; rSTs:3 tree)
- Listeria fleischmannii (isolates:9; rSTs:6 tree)
- Listeria floridensis (isolates:1; rSTs:1)
- Listeria goaensis (isolates:2; rSTs:2)
- Listeria grandensis (isolates:4; rSTs:4 tree)
- Listeria grayi (isolates:6; rSTs:5 tree)
- Listeria ilorinensis (isolates:1; rSTs:1)
- Listeria immobilis (isolates:9; rSTs:6 tree)
- Listeria innocua (isolates:1223; rSTs:258 tree)
- Listeria ivanovii (isolates:47; rSTs:20 tree)
- Listeria kieliensis (isolates:1; rSTs:1)
- Listeria marthii (isolates:36; rSTs:34 tree)
- Listeria monocytogenes (isolates:52541; rSTs:4557)
- Listeria newyorkensis (isolates:7; rSTs:5 tree)
- Listeria portnoyi (isolates:1; rSTs:1)
- Listeria riparia (isolates:1; rSTs:1)
- Listeria rocourtiae (isolates:4; rSTs:4 tree)
- Listeria rustica (isolates:1; rSTs:1)
- Listeria seeligeri (isolates:247; rSTs:135 tree)
- Listeria sp. (isolates:9; rSTs:5 tree)
- Listeria swaminathanii (isolates:13; rSTs:2)
- Listeria thailandensis (isolates:1; rSTs:1)
- Listeria valentina (isolates:1; rSTs:1)
- Listeria weihenstephanensis (isolates:3; rSTs:2)
- Listeria welshimeri (isolates:194; rSTs:180 tree)
- Paenibacillaceae (isolates:1363; rSTs:1078 tree)
- Ammoniphilus (isolates:2; rSTs:2)
- Aneurinibacillus (isolates:35; rSTs:19 tree)
- Aneurinibacillus aneurinilyticus (isolates:8; rSTs:3)
- Aneurinibacillus danicus (isolates:1; rSTs:1)
- Aneurinibacillus migulanus (isolates:12; rSTs:4 tree)
- Aneurinibacillus soli (isolates:2; rSTs:1)
- Aneurinibacillus sp. (isolates:2; rSTs:2)
- Aneurinibacillus terranovensis (isolates:1; rSTs:1)
- Aneurinibacillus thermoaerophilus (isolates:8; rSTs:6)
- Aneurinibacillus tyrosinisolvens (isolates:1; rSTs:1)
- Brevibacillus (isolates:175; rSTs:142 tree)
- Brevibacillus agri (isolates:20; rSTs:10 tree)
- Brevibacillus antibioticus (isolates:1; rSTs:1)
- Brevibacillus aydinogluensis (isolates:2; rSTs:2)
- Brevibacillus borstelensis (isolates:16; rSTs:13 tree)
- Brevibacillus brevis (isolates:4; rSTs:1)
- Brevibacillus centrosporus (isolates:6; rSTs:4)
- Brevibacillus choshinensis (isolates:4; rSTs:4)
- Brevibacillus composti (isolates:2; rSTs:1)
- Brevibacillus daliensis (isolates:1; rSTs:1)
- Brevibacillus dissolubilis (isolates:1; rSTs:1)
- Brevibacillus fluminis (isolates:1; rSTs:1)
- Brevibacillus formosus (isolates:10; rSTs:4 tree)
- Brevibacillus fortis (isolates:2; rSTs:2)
- Brevibacillus fulvus (isolates:1; rSTs:1)
- Brevibacillus gelatini (isolates:1; rSTs:1)
- Brevibacillus halotolerans (isolates:4; rSTs:4 tree)
- Brevibacillus humidisoli (isolates:1; rSTs:1)
- Brevibacillus invocatus (isolates:3; rSTs:2)
- Brevibacillus laterosporus (isolates:33; rSTs:17 tree)
- Brevibacillus marinus (isolates:1; rSTs:1)
- Brevibacillus massiliensis (isolates:2; rSTs:1)
- Brevibacillus migulae (isolates:1; rSTs:1)
- Brevibacillus nitrificans (isolates:3; rSTs:3)
- Brevibacillus panacihumi (isolates:2; rSTs:2)
- Brevibacillus parabrevis (isolates:9; rSTs:8 tree)
- Brevibacillus porteri (isolates:6; rSTs:1)
- Brevibacillus reuszeri (isolates:5; rSTs:3 tree)
- Brevibacillus ruminantium (isolates:1; rSTs:1)
- Brevibacillus sp. (isolates:29; rSTs:47 tree)
- Brevibacillus thermoruber (isolates:3; rSTs:3 tree)
- Candidatus Pristimantibacillus (isolates:1; rSTs:1)
- Candidatus Pristimantibacillus lignocellulolyticus (isolates:1; rSTs:1)
- Chengkuizengella (isolates:3; rSTs:3 tree)
- Cohnella (isolates:45; rSTs:39 tree)
- Cohnella abietis (isolates:1; rSTs:1)
- Cohnella algarum (isolates:1; rSTs:1)
- Cohnella boryungensis (isolates:1; rSTs:1)
- Cohnella candidum (isolates:1; rSTs:1)
- Cohnella cholangitidis (isolates:1; rSTs:1)
- Cohnella endophytica (isolates:1; rSTs:1)
- Cohnella faecalis (isolates:1)
- Cohnella fermenti (isolates:1; rSTs:1)
- Cohnella ginsengisoli (isolates:1; rSTs:1)
- Cohnella hashimotonis (isolates:1; rSTs:1)
- Cohnella herbarum (isolates:1; rSTs:1)
- Cohnella kolymensis (isolates:1; rSTs:1)
- Cohnella laeviribosi (isolates:1; rSTs:1)
- Cohnella lubricantis (isolates:2; rSTs:1)
- Cohnella luojiensis (isolates:1; rSTs:1)
- Cohnella lupini (isolates:1; rSTs:1)
- Cohnella massiliensis (isolates:1; rSTs:1)
- Cohnella mopanensis (isolates:1; rSTs:1)
- Cohnella nanjingensis (isolates:1; rSTs:1)
- Cohnella panacarvi (isolates:1; rSTs:1)
- Cohnella phaseoli (isolates:1; rSTs:1)
- Cohnella pontilimi (isolates:1; rSTs:1)
- Cohnella rhizosphaerae (isolates:1; rSTs:1)
- Cohnella silvisoli (isolates:1; rSTs:1)
- Cohnella sp. (isolates:12; rSTs:9 tree)
- Cohnella suwonensis (isolates:1; rSTs:1)
- Cohnella terricola (isolates:1; rSTs:1)
- Cohnella thailandensis (isolates:2; rSTs:1)
- Cohnella thermotolerans (isolates:1; rSTs:1)
- Cohnella xylanilytica (isolates:2; rSTs:2)
- Cohnella zeiphila (isolates:1; rSTs:1)
- Fontibacillus (isolates:3; rSTs:3 tree)
- Gorillibacterium (isolates:3; rSTs:2)
- Insulibacter (isolates:1; rSTs:1)
- Insulibacter thermoxylanivorax (isolates:1; rSTs:1)
- Longirhabdus (isolates:1; rSTs:1)
- Longirhabdus pacifica (isolates:1; rSTs:1)
- Paenibacillus (isolates:1075; rSTs:850 tree)
- Paenibacillus abyssi (isolates:1; rSTs:1)
- Paenibacillus aceris (isolates:2; rSTs:1)
- Paenibacillus aceti (isolates:2; rSTs:2)
- Paenibacillus aestuarii (isolates:1; rSTs:1)
- Paenibacillus agaridevorans (isolates:2; rSTs:2)
- Paenibacillus agilis (isolates:1; rSTs:1)
- Paenibacillus agri (isolates:1; rSTs:1)
- Paenibacillus agricola (isolates:1; rSTs:1)
- Paenibacillus alba (isolates:2; rSTs:2)
- Paenibacillus albicereus (isolates:1; rSTs:1)
- Paenibacillus albidus (isolates:2; rSTs:1)
- Paenibacillus albiflavus (isolates:1; rSTs:1)
- Paenibacillus albilobatus (isolates:1; rSTs:1)
- Paenibacillus albus (isolates:1; rSTs:1)
- Paenibacillus algicola (isolates:1; rSTs:1)
- Paenibacillus alginolyticus (isolates:5; rSTs:2)
- Paenibacillus algorifonticola (isolates:2; rSTs:1)
- Paenibacillus alkaliterrae (isolates:1; rSTs:1)
- Paenibacillus alkalitolerans (isolates:1; rSTs:1)
- Paenibacillus allorhizoplanae (isolates:1; rSTs:1)
- Paenibacillus allorhizosphaerae (isolates:1; rSTs:1)
- Paenibacillus alvei (isolates:22; rSTs:15 tree)
- Paenibacillus amylolyticus (isolates:8; rSTs:8 tree)
- Paenibacillus anaericanus (isolates:2; rSTs:2)
- Paenibacillus andongensis (isolates:1; rSTs:1)
- Paenibacillus anseongense (isolates:2; rSTs:1)
- Paenibacillus antarcticus (isolates:2; rSTs:1)
- Paenibacillus antibioticophila (isolates:3; rSTs:2)
- Paenibacillus apiarius (isolates:11; rSTs:2)
- Paenibacillus apii (isolates:2; rSTs:2)
- Paenibacillus apis (isolates:1; rSTs:1)
- Paenibacillus aquistagni (isolates:3; rSTs:3 tree)
- Paenibacillus arenilitoris (isolates:1; rSTs:1)
- Paenibacillus arenosi (isolates:1; rSTs:1)
- Paenibacillus artemisiicola (isolates:1; rSTs:1)
- Paenibacillus assamensis (isolates:1; rSTs:1)
- Paenibacillus athensensis (isolates:1; rSTs:1)
- Paenibacillus auburnensis (isolates:1; rSTs:1)
- Paenibacillus azoreducens (isolates:2; rSTs:1)
- Paenibacillus azotifigens (isolates:1; rSTs:1)
- Paenibacillus baekrokdamisoli (isolates:2; rSTs:1)
- Paenibacillus baimaensis (isolates:1)
- Paenibacillus barcinonensis (isolates:2; rSTs:1)
- Paenibacillus barengoltzii (isolates:6; rSTs:6 tree)
- Paenibacillus beijingensis (isolates:1; rSTs:1)
- Paenibacillus borealis (isolates:1; rSTs:1)
- Paenibacillus bouchesdurhonensis (isolates:1; rSTs:1)
- Paenibacillus bovis (isolates:1; rSTs:1)
- Paenibacillus brasilensis (isolates:2; rSTs:1)
- Paenibacillus brevis (isolates:1; rSTs:1)
- Paenibacillus camelliae (isolates:1; rSTs:1)
- Paenibacillus camerounensis (isolates:1; rSTs:1)
- Paenibacillus campinasensis (isolates:2; rSTs:2)
- Paenibacillus caseinilyticus (isolates:1; rSTs:1)
- Paenibacillus castaneae (isolates:2; rSTs:1)
- Paenibacillus catalpae (isolates:1; rSTs:1)
- Paenibacillus caui (isolates:1; rSTs:1)
- Paenibacillus cellulosilyticus (isolates:2; rSTs:1)
- Paenibacillus cellulositrophicus (isolates:1; rSTs:1)
- Paenibacillus chibensis (isolates:2; rSTs:2)
- Paenibacillus chitinolyticus (isolates:7; rSTs:4 tree)
- Paenibacillus chondroitinus (isolates:2; rSTs:1)
- Paenibacillus cineris (isolates:1; rSTs:1)
- Paenibacillus cisolokensis (isolates:1; rSTs:1)
- Paenibacillus contaminans (isolates:1; rSTs:1)
- Paenibacillus cookii (isolates:1; rSTs:1)
- Paenibacillus crassostreae (isolates:2; rSTs:2)
- Paenibacillus cremeus (isolates:1; rSTs:1)
- Paenibacillus cucumis (ex Kampfer et al. 2016) (isolates:1; rSTs:1)
- Paenibacillus curdlanolyticus (isolates:1; rSTs:1)
- Paenibacillus cymbidii (isolates:1; rSTs:1)
- Paenibacillus daejeonensis (isolates:1; rSTs:1)
- Paenibacillus dakarensis (isolates:1; rSTs:1)
- Paenibacillus darwinianus (isolates:3; rSTs:1)
- Paenibacillus dauci (isolates:1; rSTs:1)
- Paenibacillus dendritiformis (isolates:10; rSTs:9 tree)
- Paenibacillus dendrobii (isolates:1; rSTs:1)
- Paenibacillus dokdonensis (isolates:2; rSTs:2)
- Paenibacillus donghaensis (isolates:1; rSTs:1)
- Paenibacillus doosanensis (isolates:1; rSTs:1)
- Paenibacillus durus (isolates:3; rSTs:2)
- Paenibacillus ehimensis (isolates:4; rSTs:4 tree)
- Paenibacillus elgii (isolates:8; rSTs:6 tree)
- Paenibacillus endophyticus (isolates:1; rSTs:1)
- Paenibacillus endoradicis (isolates:1; rSTs:1)
- Paenibacillus etheri (isolates:1; rSTs:1)
- Paenibacillus eucommiae (isolates:1; rSTs:1)
- Paenibacillus faecalis (isolates:1; rSTs:1)
- Paenibacillus faecis (isolates:2; rSTs:2)
- Paenibacillus farraposensis (isolates:1; rSTs:1)
- Paenibacillus favisporus (isolates:1; rSTs:1)
- Paenibacillus ferrarius (isolates:1; rSTs:1)
- Paenibacillus filicis (isolates:1; rSTs:1)
- Paenibacillus flagellatus (isolates:1; rSTs:1)
- Paenibacillus foliorum (isolates:1; rSTs:1)
- Paenibacillus fonticola (isolates:1; rSTs:1)
- Paenibacillus forsythiae (isolates:2; rSTs:1)
- Paenibacillus frigoriresistens (isolates:1; rSTs:1)
- Paenibacillus gallinarum (isolates:1; rSTs:1)
- Paenibacillus germinis (isolates:1; rSTs:1)
- Paenibacillus ginsengarvi (isolates:1; rSTs:1)
- Paenibacillus ginsengihumi (isolates:1; rSTs:1)
- Paenibacillus glacialis (isolates:1; rSTs:1)
- Paenibacillus glucanolyticus (isolates:4; rSTs:3 tree)
- Paenibacillus glycanilyticus (isolates:3; rSTs:3 tree)
- Paenibacillus glycinis (isolates:1; rSTs:1)
- Paenibacillus gorillae (isolates:1; rSTs:1)
- Paenibacillus graminis (isolates:3; rSTs:2)
- Paenibacillus guangzhouensis (isolates:1; rSTs:1)
- Paenibacillus hamazuiensis (isolates:1; rSTs:1)
- Paenibacillus harenae (isolates:1; rSTs:1)
- Paenibacillus helianthi (isolates:1; rSTs:1)
- Paenibacillus hemerocallicola (isolates:1; rSTs:1)
- Paenibacillus herberti (isolates:1; rSTs:1)
- Paenibacillus humicus (isolates:1; rSTs:1)
- Paenibacillus hunanensis (isolates:4; rSTs:3 tree)
- Paenibacillus ihbetae (isolates:2; rSTs:2)
- Paenibacillus ihuae (isolates:2; rSTs:1)
- Paenibacillus ihumii (isolates:2; rSTs:1)
- Paenibacillus illinoisensis (isolates:8; rSTs:7 tree)
- Paenibacillus jamilae (isolates:1; rSTs:1)
- Paenibacillus jilunlii (isolates:3; rSTs:1)
- Paenibacillus kobensis (isolates:1; rSTs:1)
- Paenibacillus koleovorans (isolates:1; rSTs:1)
- Paenibacillus konkukensis (isolates:1; rSTs:1)
- Paenibacillus kribbensis (isolates:4; rSTs:4 tree)
- Paenibacillus kyungheensis (isolates:1; rSTs:1)
- Paenibacillus lactis (isolates:3; rSTs:4 tree)
- Paenibacillus larvae (isolates:114; rSTs:40 tree)
- Paenibacillus lautus (isolates:14; rSTs:13 tree)
- Paenibacillus lemnae (isolates:1; rSTs:1)
- Paenibacillus lentus (isolates:1; rSTs:1)
- Paenibacillus lignilyticus (isolates:1; rSTs:1)
- Paenibacillus lupini (isolates:1; rSTs:1)
- Paenibacillus luteus (isolates:1; rSTs:1)
- Paenibacillus lutimineralis (isolates:1; rSTs:1)
- Paenibacillus lutrae (isolates:1; rSTs:1)
- Paenibacillus lycopersici (isolates:1; rSTs:1)
- Paenibacillus macerans (isolates:14; rSTs:8 tree)
- Paenibacillus macquariensis (isolates:4; rSTs:2)
- Paenibacillus mangrovi (isolates:1; rSTs:1)
- Paenibacillus marchantiae (isolates:1; rSTs:1)
- Paenibacillus marchantiophytorum (isolates:1; rSTs:1)
- Paenibacillus massiliensis (isolates:3; rSTs:3 tree)
- Paenibacillus maysiensis (isolates:1; rSTs:1)
- Paenibacillus melissococcoides (isolates:2; rSTs:1)
- Paenibacillus mellifer (isolates:1; rSTs:1)
- Paenibacillus mendelii (isolates:2; rSTs:1)
- Paenibacillus mesophilus (isolates:1; rSTs:1)
- Paenibacillus methanolicus (isolates:1; rSTs:1)
- Paenibacillus montanisoli (isolates:1; rSTs:1)
- Paenibacillus montaniterrae (isolates:1; rSTs:1)
- Paenibacillus monticola (isolates:1; rSTs:1)
- Paenibacillus motobuensis (isolates:1; rSTs:1)
- Paenibacillus mucilaginosus (isolates:6; rSTs:4 tree)
- Paenibacillus nanensis (isolates:1; rSTs:1)
- Paenibacillus naphthalenovorans (isolates:3; rSTs:3 tree)
- Paenibacillus nasutitermitis (isolates:1; rSTs:1)
- Paenibacillus nicotianae (isolates:1; rSTs:1)
- Paenibacillus nuruki (isolates:2; rSTs:2)
- Paenibacillus oceani (isolates:1; rSTs:1)
- Paenibacillus odorifer (isolates:34; rSTs:31 tree)
- Paenibacillus oenotherae (isolates:1; rSTs:1)
- Paenibacillus oleatilyticus (isolates:1; rSTs:1)
- Paenibacillus oralis (isolates:1; rSTs:1)
- Paenibacillus oryzae (isolates:1; rSTs:1)
- Paenibacillus oryzisoli (isolates:1; rSTs:1)
- Paenibacillus ottowii (isolates:2; rSTs:2)
- Paenibacillus pabuli (isolates:2; rSTs:1)
- Paenibacillus paeoniae (isolates:1; rSTs:1)
- Paenibacillus paridis (isolates:1)
- Paenibacillus pasadenensis (isolates:3; rSTs:2)
- Paenibacillus pectinilyticus (isolates:1; rSTs:1)
- Paenibacillus peoriae (isolates:2; rSTs:1)
- Paenibacillus periandrae (isolates:1; rSTs:1)
- Paenibacillus phocaensis (isolates:2; rSTs:1)
- Paenibacillus phoenicis (isolates:1; rSTs:1)
- Paenibacillus phyllosphaerae (isolates:1; rSTs:1)
- Paenibacillus physcomitrellae (isolates:2; rSTs:1)
- Paenibacillus phytohabitans (isolates:2; rSTs:2)
- Paenibacillus phytorum (isolates:1; rSTs:1)
- Paenibacillus pini (isolates:2; rSTs:1)
- Paenibacillus pinihumi (isolates:1; rSTs:1)
- Paenibacillus pinisoli (isolates:1; rSTs:1)
- Paenibacillus pinistramenti (isolates:1; rSTs:1)
- Paenibacillus piri (isolates:1; rSTs:1)
- Paenibacillus piscarius (isolates:1; rSTs:1)
- Paenibacillus plantarum (isolates:1; rSTs:1)
- Paenibacillus planticolens (isolates:1; rSTs:1)
- Paenibacillus plantiphilus (isolates:1; rSTs:1)
- Paenibacillus polygoni (isolates:1; rSTs:1)
- Paenibacillus polymyxa (isolates:98; rSTs:66 tree)
- Paenibacillus polysaccharolyticus (isolates:2; rSTs:2)
- Paenibacillus popilliae (isolates:1; rSTs:1)
- Paenibacillus profundus (isolates:1; rSTs:1)
- Paenibacillus prosopidis (isolates:1; rSTs:1)
- Paenibacillus protaetiae (isolates:1; rSTs:1)
- Paenibacillus pseudetheri (isolates:1; rSTs:1)
- Paenibacillus psychroresistens (isolates:1; rSTs:1)
- Paenibacillus puerhi (isolates:1; rSTs:1)
- Paenibacillus qinlingensis (isolates:2; rSTs:1)
- Paenibacillus radicibacter (isolates:1; rSTs:1)
- Paenibacillus radicis (isolates:1; rSTs:1)
- Paenibacillus radicis (ex Xue et al. 2023) (isolates:1; rSTs:1)
- Paenibacillus rhizolycopersici (isolates:1; rSTs:1)
- Paenibacillus rhizophilus (isolates:1; rSTs:1)
- Paenibacillus rhizoplanae (isolates:1; rSTs:1)
- Paenibacillus rhizosphaerae (isolates:2; rSTs:1)
- Paenibacillus rhizovicinus (isolates:1; rSTs:1)
- Paenibacillus rigui (isolates:1; rSTs:1)
- Paenibacillus riograndensis (isolates:4; rSTs:2)
- Paenibacillus roseus (isolates:1; rSTs:1)
- Paenibacillus rubinfantis (isolates:2; rSTs:1)
- Paenibacillus sabinae (isolates:1; rSTs:1)
- Paenibacillus sabuli (isolates:1; rSTs:1)
- Paenibacillus sacheonensis (isolates:2; rSTs:1)
- Paenibacillus sambharensis (isolates:1; rSTs:1)
- Paenibacillus sanguinis (isolates:1; rSTs:1)
- Paenibacillus sedimenti (isolates:1; rSTs:1)
- Paenibacillus sediminis (isolates:1; rSTs:1)
- Paenibacillus segetis (isolates:1; rSTs:1)
- Paenibacillus selenitireducens (isolates:1; rSTs:1)
- Paenibacillus senegalensis (isolates:2; rSTs:1)
- Paenibacillus senegalimassiliensis (isolates:2; rSTs:1)
- Paenibacillus sepulcri (isolates:1; rSTs:1)
- Paenibacillus shirakamiensis (isolates:1; rSTs:1)
- Paenibacillus silagei (isolates:1; rSTs:1)
- Paenibacillus silvae (isolates:6; rSTs:4 tree)
- Paenibacillus silvestris (isolates:1; rSTs:1)
- Paenibacillus silvisoli (isolates:1)
- Paenibacillus sinensis (isolates:1; rSTs:1)
- Paenibacillus sinopodophylli (isolates:1; rSTs:1)
- Paenibacillus solanacearum (isolates:1; rSTs:1)
- Paenibacillus solani (isolates:1; rSTs:1)
- Paenibacillus sonchi (isolates:3; rSTs:2)
- Paenibacillus sophorae (isolates:2; rSTs:2)
- Paenibacillus soyae (isolates:1; rSTs:1)
- Paenibacillus sp. (isolates:307; rSTs:298 tree)
- Paenibacillus spiritus (isolates:1; rSTs:1)
- Paenibacillus spongiae (isolates:1; rSTs:1)
- Paenibacillus stellifer (isolates:1; rSTs:1)
- Paenibacillus swuensis (isolates:1; rSTs:1)
- Paenibacillus taichungensis (isolates:5; rSTs:4 tree)
- Paenibacillus taihuensis (isolates:1; rSTs:1)
- Paenibacillus taiwanensis (isolates:1; rSTs:1)
- Paenibacillus tarimensis (isolates:1; rSTs:1)
- Paenibacillus tengchongensis (isolates:1; rSTs:1)
- Paenibacillus terrae (isolates:3; rSTs:2)
- Paenibacillus terricola (isolates:1; rSTs:1)
- Paenibacillus terrigena (isolates:1; rSTs:1)
- Paenibacillus thalictri (isolates:1; rSTs:1)
- Paenibacillus thermoaerophilus (isolates:1; rSTs:1)
- Paenibacillus thiaminolyticus (isolates:26; rSTs:7 tree)
- Paenibacillus tianjinensis (isolates:1; rSTs:1)
- Paenibacillus tianmuensis (isolates:1; rSTs:1)
- Paenibacillus timonensis (isolates:3; rSTs:3 tree)
- Paenibacillus tritici (isolates:2; rSTs:2)
- Paenibacillus tuaregi (isolates:2; rSTs:1)
- Paenibacillus tundrae (isolates:1; rSTs:1)
- Paenibacillus turicensis (isolates:1; rSTs:1)
- Paenibacillus turpanensis (isolates:1; rSTs:1)
- Paenibacillus typhae (isolates:2; rSTs:2)
- Paenibacillus tyrfis (isolates:2; rSTs:2)
- Paenibacillus uliginis (isolates:1; rSTs:1)
- Paenibacillus urinalis (isolates:4; rSTs:3 tree)
- Paenibacillus validus (isolates:4; rSTs:2)
- Paenibacillus vandeheii (isolates:1; rSTs:1)
- Paenibacillus vietnamensis (isolates:1; rSTs:1)
- Paenibacillus vini (isolates:2; rSTs:2)
- Paenibacillus vortex (isolates:1; rSTs:1)
- Paenibacillus whitsoniae (isolates:1; rSTs:1)
- Paenibacillus woosongensis (isolates:3; rSTs:3 tree)
- Paenibacillus wulumuqiensis (isolates:1; rSTs:1)
- Paenibacillus wynnii (isolates:1; rSTs:1)
- Paenibacillus xerothermodurans (isolates:1; rSTs:1)
- Paenibacillus xylanexedens (isolates:1; rSTs:1)
- Paenibacillus xylaniclasticus (isolates:1; rSTs:1)
- Paenibacillus xylanilyticus (isolates:1; rSTs:1)
- Paenibacillus xylanivorans (isolates:1; rSTs:1)
- Paenibacillus yonginensis (isolates:1; rSTs:1)
- Paenibacillus zanthoxyli (isolates:1; rSTs:1)
- Paenibacillus zeisoli (isolates:1; rSTs:1)
- Saccharibacillus (isolates:15; rSTs:12 tree)
- Saccharibacillus alkalitolerans (isolates:1; rSTs:1)
- Saccharibacillus brassicae (isolates:1; rSTs:1)
- Saccharibacillus deserti (isolates:2; rSTs:1)
- Saccharibacillus endophyticus (isolates:2; rSTs:1)
- Saccharibacillus kuerlensis (isolates:2; rSTs:1)
- Saccharibacillus qingshengii (isolates:1; rSTs:1)
- Saccharibacillus sacchari (isolates:1; rSTs:1)
- Saccharibacillus sp. (isolates:5; rSTs:5 tree)
- Thermobacillus (isolates:2; rSTs:2)
- Xylanibacillus (isolates:2; rSTs:1)
- Xylanibacillus composti (isolates:2; rSTs:1)
- Pasteuriaceae (isolates:1)
- Planococcaceae (isolates:273; rSTs:236 tree)
- Bhargavaea (isolates:9; rSTs:9 tree)
- Caryophanon (isolates:2; rSTs:2)
- Chryseomicrobium (isolates:1; rSTs:1)
- Chryseomicrobium excrementi (isolates:1; rSTs:1)
- Filibacter (isolates:1; rSTs:1)
- Filibacter tadaridae (isolates:1; rSTs:1)
- Indiicoccus (isolates:1; rSTs:1)
- Indiicoccus explosivorum (isolates:1; rSTs:1)
- Jeotgalibacillus (isolates:12; rSTs:12 tree)
- Jeotgalibacillus alimentarius (isolates:1; rSTs:1)
- Jeotgalibacillus aurantiacus (isolates:1; rSTs:1)
- Jeotgalibacillus campisalis (isolates:1; rSTs:1)
- Jeotgalibacillus malaysiensis (isolates:1; rSTs:1)
- Jeotgalibacillus proteolyticus (isolates:1; rSTs:1)
- Jeotgalibacillus salarius (isolates:1; rSTs:1)
- Jeotgalibacillus soli (isolates:1; rSTs:1)
- Jeotgalibacillus sp. (isolates:4; rSTs:4 tree)
- Jeotgalibacillus terrae (isolates:1; rSTs:1)
- Kurthia (isolates:22; rSTs:16 tree)
- Metalysinibacillus (isolates:1; rSTs:1)
- Metalysinibacillus jejuensis (isolates:1; rSTs:1)
- Metasolibacillus (isolates:3; rSTs:3)
- Paenisporosarcina (isolates:12; rSTs:8 tree)
- Planococcus (isolates:69; rSTs:57 tree)
- Planococcus antarcticus (isolates:2; rSTs:2)
- Planococcus beigongshangi (isolates:1; rSTs:1)
- Planococcus beijingensis (isolates:1; rSTs:1)
- Planococcus chinensis (isolates:1; rSTs:1)
- Planococcus citreus (isolates:2; rSTs:1)
- Planococcus donghaensis (isolates:2; rSTs:2)
- Planococcus faecalis (isolates:2; rSTs:1)
- Planococcus glaciei (isolates:6; rSTs:5 tree)
- Planococcus halocryophilus (isolates:3; rSTs:2)
- Planococcus halotolerans (isolates:2; rSTs:2)
- Planococcus kocurii (isolates:1; rSTs:1)
- Planococcus koreensis (isolates:2; rSTs:1)
- Planococcus lenghuensis (isolates:1; rSTs:1)
- Planococcus maitriensis (isolates:1; rSTs:1)
- Planococcus maritimus (isolates:5; rSTs:5 tree)
- Planococcus massiliensis (isolates:2; rSTs:1)
- Planococcus plakortidis (isolates:1; rSTs:1)
- Planococcus rifietoensis (isolates:1; rSTs:1)
- Planococcus salinarum (isolates:2; rSTs:1)
- Planococcus salinus (isolates:1; rSTs:1)
- Planococcus soli (isolates:2; rSTs:1)
- Planococcus sp. (isolates:26; rSTs:22 tree)
- Planococcus versutus (isolates:1; rSTs:1)
- Planococcus wigleyi (isolates:1; rSTs:1)
- Planomicrobium (isolates:8; rSTs:8 tree)
- Rummeliibacillus (isolates:12; rSTs:11 tree)
- Savagea (isolates:1; rSTs:1)
- Savagea serpentis (isolates:1; rSTs:1)
- Solibacillus (isolates:12; rSTs:11 tree)
- Solibacillus cecembensis (isolates:1; rSTs:1)
- Solibacillus daqui (isolates:1; rSTs:1)
- Solibacillus faecavium (isolates:1; rSTs:1)
- Solibacillus isronensis (isolates:2; rSTs:2)
- Solibacillus kalamii (isolates:2; rSTs:1)
- Solibacillus merdavium (isolates:1; rSTs:1)
- Solibacillus palustris (isolates:1)
- Solibacillus silvestris (isolates:1; rSTs:1)
- Solibacillus sp. (isolates:2; rSTs:3 tree)
- Sporosarcina (isolates:77; rSTs:70 tree)
- Sporosarcina aquimarina (isolates:1; rSTs:1)
- Sporosarcina beigongshangi (isolates:1; rSTs:1)
- Sporosarcina cascadiensis (isolates:1)
- Sporosarcina cyprini (isolates:1; rSTs:1)
- Sporosarcina gallistercoris (isolates:1; rSTs:1)
- Sporosarcina highlanderae (isolates:1; rSTs:1)
- Sporosarcina jiandibaonis (isolates:1; rSTs:1)
- Sporosarcina koreensis (isolates:1; rSTs:1)
- Sporosarcina limicola (isolates:1; rSTs:1)
- Sporosarcina luteola (isolates:1; rSTs:1)
- Sporosarcina newyorkensis (isolates:1; rSTs:1)
- Sporosarcina obsidiansis (isolates:1)
- Sporosarcina pasteurii (isolates:3; rSTs:1)
- Sporosarcina psychrophila (isolates:1; rSTs:1)
- Sporosarcina quadrami (isolates:1; rSTs:1)
- Sporosarcina saromensis (isolates:1; rSTs:1)
- Sporosarcina sp. (isolates:51; rSTs:49 tree)
- Sporosarcina thermotolerans (isolates:2; rSTs:2)
- Sporosarcina ureae (isolates:5; rSTs:4 tree)
- Sporosarcina ureilytica (isolates:1; rSTs:1)
- Tetzosporium (isolates:1; rSTs:1)
- Tetzosporium hominis (isolates:1; rSTs:1)
- Ureibacillus (isolates:21; rSTs:16 tree)
- Ureibacillus acetophenoni (isolates:1; rSTs:1)
- Ureibacillus chungkukjangi (isolates:3; rSTs:2)
- Ureibacillus galli (isolates:1; rSTs:1)
- Ureibacillus manganicus (isolates:2; rSTs:1)
- Ureibacillus massiliensis (isolates:2; rSTs:1)
- Ureibacillus sinduriensis (isolates:2; rSTs:1)
- Ureibacillus sp. (isolates:1; rSTs:1)
- Ureibacillus terrenus (isolates:3; rSTs:3)
- Ureibacillus thermophilus (isolates:1; rSTs:1)
- Ureibacillus thermosphaericus (isolates:4; rSTs:3 tree)
- Ureibacillus xyleni (isolates:1; rSTs:1)
- Viridibacillus (isolates:8; rSTs:7 tree)
- Salinicoccaceae (isolates:6; rSTs:1)
- Sporolactobacillaceae (isolates:35; rSTs:30 tree)
- Caenibacillus (isolates:1; rSTs:1)
- Caenibacillus caldisaponilyticus (isolates:1; rSTs:1)
- Pullulanibacillus (isolates:3; rSTs:2)
- Scopulibacillus (isolates:2; rSTs:2)
- Sinobaca (isolates:1; rSTs:1)
- Sinobaca qinghaiensis (isolates:1; rSTs:1)
- Sporolactobacillus (isolates:27; rSTs:23 tree)
- Sporolactobacillus inulinus (isolates:3; rSTs:2)
- Sporolactobacillus kofuensis (isolates:1; rSTs:1)
- Sporolactobacillus laevolacticus (isolates:2; rSTs:2)
- Sporolactobacillus mangiferae (isolates:1; rSTs:1)
- Sporolactobacillus nakayamae (isolates:1; rSTs:1)
- Sporolactobacillus pectinivorans (isolates:1; rSTs:1)
- Sporolactobacillus putidus (isolates:1; rSTs:1)
- Sporolactobacillus shoreae (isolates:1; rSTs:1)
- Sporolactobacillus shoreicorticis (isolates:1; rSTs:1)
- Sporolactobacillus sp. (isolates:4; rSTs:5 tree)
- Sporolactobacillus spathodeae (isolates:1; rSTs:1)
- Sporolactobacillus terrae (isolates:7; rSTs:5 tree)
- Sporolactobacillus vineae (isolates:3; rSTs:1)
- Tuberibacillus (isolates:1; rSTs:1)
- Tuberibacillus calidus (isolates:1; rSTs:1)
- Caenibacillus (isolates:1; rSTs:1)
- Staphylococcaceae (isolates:102768; rSTs:28556)
- Aliicoccus (isolates:1; rSTs:1)
- Aliicoccus persicus (isolates:1; rSTs:1)
- Jeotgalicoccus (isolates:16; rSTs:10 tree)
- Jeotgalicoccus aerolatus (isolates:3; rSTs:2)
- Jeotgalicoccus coquinae (isolates:3; rSTs:1)
- Jeotgalicoccus halotolerans (isolates:1; rSTs:1)
- Jeotgalicoccus marinus (isolates:1; rSTs:1)
- Jeotgalicoccus meleagridis (isolates:1; rSTs:1)
- Jeotgalicoccus nanhaiensis (isolates:2; rSTs:1)
- Jeotgalicoccus psychrophilus (isolates:1; rSTs:1)
- Jeotgalicoccus saudimassiliensis (isolates:1; rSTs:1)
- Jeotgalicoccus sp. (isolates:3; rSTs:1)
- Macrococcoides (isolates:92)
- Macrococcus (isolates:27; rSTs:22 tree)
- Macrococcus armenti (isolates:8; rSTs:6 tree)
- Macrococcus bovicus (isolates:2; rSTs:2)
- Macrococcus brunensis (isolates:3; rSTs:2)
- Macrococcus carouselicus (isolates:1; rSTs:1)
- Macrococcus epidermidis (isolates:3; rSTs:3 tree)
- Macrococcus equipercicus (isolates:2; rSTs:2)
- Macrococcus hajekii (isolates:2; rSTs:1)
- Macrococcus lamae (isolates:1; rSTs:1)
- Macrococcus sp. (isolates:5; rSTs:4 tree)
- Mammaliicoccus (isolates:422; rSTs:324 tree)
- Mammaliicoccus fleurettii (isolates:13; rSTs:10 tree)
- Mammaliicoccus lentus (isolates:37; rSTs:27 tree)
- Mammaliicoccus sciuri (isolates:283; rSTs:231 tree)
- Mammaliicoccus sp. (isolates:65; rSTs:40 tree)
- Mammaliicoccus stepanovicii (isolates:3; rSTs:1)
- Mammaliicoccus vitulinus (isolates:21; rSTs:15 tree)
- Nosocomiicoccus (isolates:9; rSTs:9 tree)
- Salinicoccus (isolates:23; rSTs:21 tree)
- Salinicoccus albus (isolates:1; rSTs:1)
- Salinicoccus carnicancri (isolates:1; rSTs:1)
- Salinicoccus cyprini (isolates:1; rSTs:1)
- Salinicoccus halitifaciens (isolates:1; rSTs:1)
- Salinicoccus halodurans (isolates:2; rSTs:1)
- Salinicoccus hispanicus (isolates:1; rSTs:1)
- Salinicoccus kekensis (isolates:1; rSTs:1)
- Salinicoccus luteus (isolates:1; rSTs:1)
- Salinicoccus roseus (isolates:10; rSTs:9 tree)
- Salinicoccus sediminis (isolates:1; rSTs:1)
- Salinicoccus sp. (isolates:3; rSTs:3 tree)
- Staphylococcus (isolates:102178; rSTs:28169)
- Staphylococcus agnetis (isolates:60; rSTs:39 tree)
- Staphylococcus americanisciuri (isolates:1; rSTs:1)
- Staphylococcus argensis (isolates:9; rSTs:2)
- Staphylococcus argenteus (isolates:273; rSTs:83 tree)
- Staphylococcus arlettae (isolates:49; rSTs:41 tree)
- Staphylococcus aureus (isolates:90003; rSTs:21603)
- Staphylococcus auricularis (isolates:15; rSTs:10 tree)
- Staphylococcus borealis (isolates:16; rSTs:16 tree)
- Staphylococcus caeli (isolates:2; rSTs:1)
- Staphylococcus caledonicus (isolates:1; rSTs:1)
- Staphylococcus canis (isolates:1; rSTs:1)
- Staphylococcus capitis (isolates:226; rSTs:136 tree)
- Staphylococcus caprae (isolates:23; rSTs:19 tree)
- Staphylococcus carnosus (isolates:23; rSTs:9 tree)
- Staphylococcus casei (isolates:1; rSTs:1)
- Staphylococcus chromogenes (isolates:165; rSTs:114 tree)
- Staphylococcus coagulans (isolates:172; rSTs:88 tree)
- Staphylococcus cohnii (isolates:58; rSTs:42 tree)
- Staphylococcus condimenti (isolates:11; rSTs:4 tree)
- Staphylococcus cornubiensis (isolates:1; rSTs:1)
- Staphylococcus croceilyticus (isolates:2; rSTs:1)
- Staphylococcus debuckii (isolates:1; rSTs:1)
- Staphylococcus delphini (isolates:39; rSTs:30 tree)
- Staphylococcus devriesei (isolates:12; rSTs:11 tree)
- Staphylococcus durrellii (isolates:1; rSTs:1)
- Staphylococcus edaphicus (isolates:2; rSTs:1)
- Staphylococcus epidermidis (isolates:4538; rSTs:1491 tree)
- Staphylococcus equorum (isolates:102; rSTs:89 tree)
- Staphylococcus felis (isolates:42; rSTs:25 tree)
- Staphylococcus gallinarum (isolates:50; rSTs:36 tree)
- Staphylococcus haemolyticus (isolates:613; rSTs:384 tree)
- Staphylococcus hominis (isolates:285; rSTs:179 tree)
- Staphylococcus hyicus (isolates:25; rSTs:18 tree)
- Staphylococcus intermedius (isolates:8; rSTs:4 tree)
- Staphylococcus kloosii (isolates:10; rSTs:7 tree)
- Staphylococcus lloydii (isolates:4; rSTs:2)
- Staphylococcus lugdunensis (isolates:107; rSTs:45 tree)
- Staphylococcus lutrae (isolates:2; rSTs:1)
- Staphylococcus marylandisciuri (isolates:1; rSTs:1)
- Staphylococcus massiliensis (isolates:6; rSTs:5 tree)
- Staphylococcus microti (isolates:3; rSTs:1)
- Staphylococcus muscae (isolates:4; rSTs:1)
- Staphylococcus nepalensis (isolates:27; rSTs:17 tree)
- Staphylococcus pasteuri (isolates:37; rSTs:38 tree)
- Staphylococcus petrasii (isolates:9; rSTs:4 tree)
- Staphylococcus pettenkoferi (isolates:54; rSTs:45 tree)
- Staphylococcus piscifermentans (isolates:2; rSTs:1)
- Staphylococcus pragensis (isolates:2; rSTs:1)
- Staphylococcus pseudintermedius (isolates:3966; rSTs:2807 tree)
- Staphylococcus pseudoxylosus (isolates:18; rSTs:15 tree)
- Staphylococcus ratti (isolates:1; rSTs:1)
- Staphylococcus rostri (isolates:2; rSTs:2)
- Staphylococcus roterodami (isolates:1; rSTs:1)
- Staphylococcus saccharolyticus (isolates:15; rSTs:8 tree)
- Staphylococcus saprophyticus (isolates:188; rSTs:116 tree)
- Staphylococcus schleiferi (isolates:50; rSTs:28 tree)
- Staphylococcus schweitzeri (isolates:9; rSTs:12 tree)
- Staphylococcus shinii (isolates:16; rSTs:13 tree)
- Staphylococcus simiae (isolates:9; rSTs:3 tree)
- Staphylococcus simulans (isolates:94; rSTs:73 tree)
- Staphylococcus singaporensis (isolates:6; rSTs:5 tree)
- Staphylococcus sp. (isolates:380; rSTs:213 tree)
- Staphylococcus succinus (isolates:26; rSTs:20 tree)
- Staphylococcus taiwanensis (isolates:1; rSTs:1)
- Staphylococcus ureilyticus (isolates:13; rSTs:13 tree)
- Staphylococcus warneri (isolates:167; rSTs:102 tree)
- Staphylococcus xylosus (isolates:118; rSTs:84 tree)
- Aliicoccus (isolates:1; rSTs:1)
- Thermoactinomycetaceae (isolates:66; rSTs:56 tree)
- Baia (isolates:1; rSTs:1)
- Baia soyae (isolates:1; rSTs:1)
- Croceifilum (isolates:1; rSTs:1)
- Croceifilum oryzae (isolates:1; rSTs:1)
- Desmospora (isolates:2; rSTs:2)
- Hazenella (isolates:1; rSTs:1)
- Hazenella coriacea (isolates:1; rSTs:1)
- Kroppenstedtia (isolates:5; rSTs:4 tree)
- Laceyella (isolates:6; rSTs:6 tree)
- Lihuaxuella (isolates:1; rSTs:1)
- Lihuaxuella thermophila (isolates:1; rSTs:1)
- Marininema (isolates:2; rSTs:2)
- Marinithermofilum (isolates:1; rSTs:1)
- Marinithermofilum abyssi (isolates:1; rSTs:1)
- Melghirimyces (isolates:3; rSTs:3 tree)
- Novibacillus (isolates:1; rSTs:1)
- Novibacillus thermophilus (isolates:1; rSTs:1)
- Paenactinomyces (isolates:2; rSTs:1)
- Paenactinomyces guangxiensis (isolates:2; rSTs:1)
- Paludifilum (isolates:1; rSTs:1)
- Paludifilum halophilum (isolates:1; rSTs:1)
- Planifilum (isolates:2; rSTs:2)
- Polycladomyces (isolates:3; rSTs:2 tree)
- Polycladospora (isolates:2; rSTs:2)
- Polycladospora coralii (isolates:2; rSTs:2)
- Risungbinella (isolates:2; rSTs:1)
- Risungbinella massiliensis (isolates:2; rSTs:1)
- Seinonella (isolates:1; rSTs:1)
- Seinonella peptonophila (isolates:1; rSTs:1)
- Shimazuella (isolates:3; rSTs:3 tree)
- Staphylospora (isolates:1; rSTs:1)
- Staphylospora marina (isolates:1; rSTs:1)
- Thermoactinomyces (isolates:23; rSTs:17 tree)
- Thermoflavimicrobium (isolates:2; rSTs:2)
- Baia (isolates:1; rSTs:1)
- Lactobacillales (isolates:119744; rSTs:38197)
- Aerococcaceae (isolates:219; rSTs:157 tree)
- Abiotrophia (isolates:1; rSTs:1)
- Abiotrophia defectiva (isolates:1; rSTs:1)
- Aerococcus (isolates:179; rSTs:118 tree)
- Aerococcus agrisoli (isolates:1; rSTs:1)
- Aerococcus christensenii (isolates:6; rSTs:5 tree)
- Aerococcus kribbianus (isolates:2)
- Aerococcus loyolae (isolates:14; rSTs:9 tree)
- Aerococcus mictus (isolates:44; rSTs:20 tree)
- Aerococcus sanguinicola (isolates:12; rSTs:9 tree)
- Aerococcus sp. (isolates:27; rSTs:29 tree)
- Aerococcus suis (isolates:1; rSTs:1)
- Aerococcus tenax (isolates:12; rSTs:8 tree)
- Aerococcus urinae (isolates:36; rSTs:20 tree)
- Aerococcus urinaeequi (isolates:14; rSTs:10 tree)
- Aerococcus urinaehominis (isolates:2; rSTs:1)
- Aerococcus viridans (isolates:8; rSTs:5 tree)
- Dolosicoccus (isolates:3; rSTs:3 tree)
- Eremococcus (isolates:2; rSTs:2)
- Eremococcus coleocola (isolates:2; rSTs:2)
- Facklamia (isolates:14; rSTs:12 tree)
- Falseniella (isolates:2; rSTs:2)
- Falseniella ignava (isolates:2; rSTs:2)
- Fundicoccus (isolates:3; rSTs:3 tree)
- Globicatella (isolates:6; rSTs:8 tree)
- Hutsoniella (isolates:1; rSTs:1)
- Hutsoniella sourekii (isolates:1; rSTs:1)
- Ignavigranum (isolates:2; rSTs:2)
- Ignavigranum ruoffiae (isolates:2; rSTs:2)
- Ruoffia (isolates:4; rSTs:3 tree)
- Suicoccus (isolates:1; rSTs:1)
- Suicoccus acidiformans (isolates:1; rSTs:1)
- Vaginisenegalia (isolates:1; rSTs:1)
- Vaginisenegalia massiliensis (isolates:1; rSTs:1)
- Abiotrophia (isolates:1; rSTs:1)
- Carnobacteriaceae (isolates:240; rSTs:155 tree)
- Alkalibacterium (isolates:11; rSTs:10 tree)
- Alkalibacterium gilvum (isolates:1; rSTs:1)
- Alkalibacterium kapii (isolates:1; rSTs:1)
- Alkalibacterium olivapovliticus (isolates:1; rSTs:1)
- Alkalibacterium pelagium (isolates:2; rSTs:1)
- Alkalibacterium putridalgicola (isolates:2; rSTs:1)
- Alkalibacterium sp. (isolates:2; rSTs:3 tree)
- Alkalibacterium subtropicum (isolates:1; rSTs:1)
- Alkalibacterium thalassium (isolates:1; rSTs:1)
- Allofustis (isolates:1; rSTs:1)
- Allofustis seminis (isolates:1; rSTs:1)
- Alloiococcus (isolates:3; rSTs:1)
- Alloiococcus otitis (isolates:3; rSTs:1)
- Atopobacter (isolates:1; rSTs:1)
- Atopobacter phocae (isolates:1; rSTs:1)
- Atopococcus (isolates:1; rSTs:1)
- Atopococcus tabaci (isolates:1; rSTs:1)
- Atopostipes (isolates:1; rSTs:1)
- Atopostipes suicloacalis (isolates:1; rSTs:1)
- Carnobacterium (isolates:124; rSTs:57 tree)
- Carnobacterium alterfunditum (isolates:2; rSTs:1)
- Carnobacterium divergens (isolates:54; rSTs:17 tree)
- Carnobacterium funditum (isolates:1; rSTs:1)
- Carnobacterium gallinarum (isolates:1; rSTs:1)
- Carnobacterium iners (isolates:2; rSTs:1)
- Carnobacterium inhibens (isolates:4; rSTs:4 tree)
- Carnobacterium jeotgali (isolates:2; rSTs:1)
- Carnobacterium maltaromaticum (isolates:47; rSTs:22 tree)
- Carnobacterium mobile (isolates:2; rSTs:2)
- Carnobacterium pleistocenium (isolates:1; rSTs:1)
- Carnobacterium sp. (isolates:6; rSTs:5 tree)
- Carnobacterium viridans (isolates:2; rSTs:1)
- Desemzia (isolates:5; rSTs:5 tree)
- Dolosigranulum (isolates:32; rSTs:30 tree)
- Granulicatella (isolates:19; rSTs:16 tree)
- Isobaculum (isolates:1; rSTs:1)
- Isobaculum melis (isolates:1; rSTs:1)
- Jeotgalibaca (isolates:7; rSTs:7 tree)
- Lacticigenium (isolates:1; rSTs:1)
- Lacticigenium naphthae (isolates:1; rSTs:1)
- Marinilactibacillus (isolates:13; rSTs:11 tree)
- Pisciglobus (isolates:1; rSTs:1)
- Pisciglobus halotolerans (isolates:1; rSTs:1)
- Trichococcus (isolates:19; rSTs:11 tree)
- Trichococcus alkaliphilus (isolates:1; rSTs:1)
- Trichococcus collinsii (isolates:2; rSTs:1)
- Trichococcus flocculiformis (isolates:3; rSTs:2)
- Trichococcus ilyis (isolates:2; rSTs:1)
- Trichococcus paludicola (isolates:1)
- Trichococcus palustris (isolates:2; rSTs:1)
- Trichococcus pasteurii (isolates:3; rSTs:1)
- Trichococcus patagoniensis (isolates:1; rSTs:1)
- Trichococcus shcherbakoviae (isolates:2; rSTs:2)
- Trichococcus sp. (isolates:2; rSTs:1)
- Alkalibacterium (isolates:11; rSTs:10 tree)
- Enterococcaceae (isolates:29081; rSTs:5637)
- Bavariicoccus (isolates:1; rSTs:1)
- Bavariicoccus seileri (isolates:1; rSTs:1)
- Catellicoccus (isolates:1; rSTs:1)
- Catellicoccus marimammalium (isolates:1; rSTs:1)
- Enterococcus (isolates:28875; rSTs:5493)
- Enterococcus alcedinis (isolates:2; rSTs:1)
- Enterococcus alishanensis (isolates:1; rSTs:1)
- Enterococcus aquimarinus (isolates:1; rSTs:1)
- Enterococcus asini (isolates:12; rSTs:9 tree)
- Enterococcus avium (isolates:106; rSTs:68 tree)
- Enterococcus caccae (isolates:3; rSTs:1)
- Enterococcus canintestini (isolates:2; rSTs:2)
- Enterococcus canis (isolates:2; rSTs:1)
- Enterococcus casseliflavus (isolates:122; rSTs:94 tree)
- Enterococcus cecorum (isolates:233; rSTs:138 tree)
- Enterococcus columbae (isolates:4; rSTs:1)
- Enterococcus crotali (isolates:1; rSTs:1)
- Enterococcus devriesei (isolates:3; rSTs:3 tree)
- Enterococcus diestrammenae (isolates:3; rSTs:3 tree)
- Enterococcus dispar (isolates:6; rSTs:5 tree)
- Enterococcus dongliensis (isolates:16; rSTs:13 tree)
- Enterococcus durans (isolates:156; rSTs:48 tree)
- Enterococcus entomosocium (isolates:5; rSTs:1)
- Enterococcus faecalis (isolates:7565; rSTs:2255 tree)
- Enterococcus faecium (isolates:19504; rSTs:2108 tree)
- Enterococcus florum (isolates:1; rSTs:1)
- Enterococcus gallinarum (isolates:136; rSTs:92 tree)
- Enterococcus gilvus (isolates:3; rSTs:2)
- Enterococcus haemoperoxidus (isolates:2; rSTs:1)
- Enterococcus hermanniensis (isolates:1; rSTs:1)
- Enterococcus hirae (isolates:298; rSTs:118 tree)
- Enterococcus hulanensis (isolates:9; rSTs:4 tree)
- Enterococcus innesii (isolates:13; rSTs:8 tree)
- Enterococcus italicus (isolates:6; rSTs:5 tree)
- Enterococcus lactis (isolates:236; rSTs:117 tree)
- Enterococcus larvae (isolates:1; rSTs:1)
- Enterococcus lemanii (isolates:1; rSTs:1)
- Enterococcus malodoratus (isolates:15; rSTs:6 tree)
- Enterococcus massiliensis (isolates:2; rSTs:1)
- Enterococcus mediterraneensis (isolates:1; rSTs:1)
- Enterococcus montenegrensis (isolates:1)
- Enterococcus moraviensis (isolates:2; rSTs:1)
- Enterococcus mundtii (isolates:57; rSTs:37 tree)
- Enterococcus nangangensis (isolates:1; rSTs:1)
- Enterococcus pallens (isolates:3; rSTs:1)
- Enterococcus phoeniculicola (isolates:2; rSTs:1)
- Enterococcus pingfangensis (isolates:1; rSTs:1)
- Enterococcus plantarum (isolates:4; rSTs:4 tree)
- Enterococcus pseudoavium (isolates:5; rSTs:5 tree)
- Enterococcus quebecensis (isolates:2; rSTs:1)
- Enterococcus raffinosus (isolates:38; rSTs:21 tree)
- Enterococcus ratti (isolates:1; rSTs:1)
- Enterococcus rivorum (isolates:2; rSTs:1)
- Enterococcus rotai (isolates:1; rSTs:1)
- Enterococcus saccharolyticus (isolates:4; rSTs:2)
- Enterococcus saigonensis (isolates:1; rSTs:1)
- Enterococcus silesiacus (isolates:1; rSTs:1)
- Enterococcus songbeiensis (isolates:1; rSTs:1)
- Enterococcus sp. (isolates:225; rSTs:265 tree)
- Enterococcus spodopteracolus (isolates:4; rSTs:2)
- Enterococcus sulfureus (isolates:1; rSTs:1)
- Enterococcus termitis (isolates:2; rSTs:1)
- Enterococcus thailandicus (isolates:26; rSTs:18 tree)
- Enterococcus timonensis (isolates:1; rSTs:1)
- Enterococcus ureasiticus (isolates:2; rSTs:2)
- Enterococcus ureilyticus (isolates:4; rSTs:2)
- Enterococcus viikkiensis (isolates:2; rSTs:2)
- Enterococcus villorum (isolates:4; rSTs:2)
- Enterococcus wangshanyuanii (isolates:2; rSTs:1)
- Enterococcus xiangfangensis (isolates:3; rSTs:2)
- Melissococcus (isolates:34; rSTs:13 tree)
- Pilibacter (isolates:1; rSTs:1)
- Pilibacter termitis (isolates:1; rSTs:1)
- Tetragenococcus (isolates:79; rSTs:53 tree)
- Vagococcus (isolates:90; rSTs:75 tree)
- Vagococcus acidifermentans (isolates:1; rSTs:1)
- Vagococcus allomyrinae (isolates:1; rSTs:1)
- Vagococcus bubulae (isolates:2; rSTs:2)
- Vagococcus carniphilus (isolates:9; rSTs:7 tree)
- Vagococcus coleopterorum (isolates:1; rSTs:1)
- Vagococcus elongatus (isolates:1; rSTs:1)
- Vagococcus entomophilus (isolates:1; rSTs:1)
- Vagococcus fessus (isolates:1; rSTs:1)
- Vagococcus fluvialis (isolates:21; rSTs:16 tree)
- Vagococcus humatus (isolates:1; rSTs:1)
- Vagococcus hydrophili (isolates:1; rSTs:1)
- Vagococcus intermedius (isolates:2; rSTs:1)
- Vagococcus luciliae (isolates:1; rSTs:1)
- Vagococcus lutrae (isolates:27; rSTs:23 tree)
- Vagococcus martis (isolates:1; rSTs:1)
- Vagococcus penaei (isolates:2; rSTs:2)
- Vagococcus proximus (isolates:1; rSTs:1)
- Vagococcus salmoninarum (isolates:2; rSTs:2)
- Vagococcus silagei (isolates:1; rSTs:1)
- Vagococcus sp. (isolates:5; rSTs:4 tree)
- Vagococcus teuberi (isolates:2; rSTs:2)
- Vagococcus vulneris (isolates:1; rSTs:1)
- Vagococcus xieshaowenii (isolates:2; rSTs:1)
- Vagococcus zengguangii (isolates:3; rSTs:2)
- Bavariicoccus (isolates:1; rSTs:1)
- Lactobacillaceae (isolates:8383; rSTs:4418)
- Acetilactobacillus (isolates:1; rSTs:1)
- Acetilactobacillus jinshanensis (isolates:1; rSTs:1)
- Agrilactobacillus (isolates:4; rSTs:3 tree)
- Amylolactobacillus (isolates:3; rSTs:1)
- Amylolactobacillus amylophilus (isolates:3; rSTs:1)
- Apilactobacillus (isolates:125; rSTs:93 tree)
- Apilactobacillus apinorum (isolates:2; rSTs:1)
- Apilactobacillus apisilvae (isolates:1; rSTs:1)
- Apilactobacillus bombintestini (isolates:1; rSTs:1)
- Apilactobacillus kunkeei (isolates:76; rSTs:31 tree)
- Apilactobacillus micheneri (isolates:21; rSTs:10 tree)
- Apilactobacillus nanyangensis (isolates:3; rSTs:3 tree)
- Apilactobacillus ozensis (isolates:2; rSTs:2)
- Apilactobacillus quenuiae (isolates:1; rSTs:1)
- Apilactobacillus sp. (isolates:1; rSTs:29 tree)
- Apilactobacillus timberlakei (isolates:9; rSTs:6 tree)
- Apilactobacillus waqarii (isolates:1; rSTs:1)
- Apilactobacillus xinyiensis (isolates:6; rSTs:6 tree)
- Apilactobacillus zhangqiuensis (isolates:1; rSTs:1)
- Bombilactobacillus (isolates:14; rSTs:14 tree)
- Bombilactobacillus apium (isolates:1; rSTs:1)
- Bombilactobacillus bombi (isolates:4; rSTs:4 tree)
- Bombilactobacillus folatiphilus (isolates:1; rSTs:1)
- Bombilactobacillus mellifer (isolates:1; rSTs:1)
- Bombilactobacillus mellis (isolates:6; rSTs:6 tree)
- Bombilactobacillus thymidiniphilus (isolates:1; rSTs:1)
- Companilactobacillus (isolates:78; rSTs:54 tree)
- Companilactobacillus alimentarius (isolates:4; rSTs:2)
- Companilactobacillus allii (isolates:3; rSTs:2)
- Companilactobacillus baiquanensis (isolates:1; rSTs:1)
- Companilactobacillus bobalius (isolates:3; rSTs:2)
- Companilactobacillus crustorum (isolates:5; rSTs:3 tree)
- Companilactobacillus farciminis (isolates:6; rSTs:3 tree)
- Companilactobacillus formosensis (isolates:2; rSTs:1)
- Companilactobacillus furfuricola (isolates:1; rSTs:1)
- Companilactobacillus futsaii (isolates:4; rSTs:2)
- Companilactobacillus ginsenosidimutans (isolates:1; rSTs:1)
- Companilactobacillus halodurans (isolates:2; rSTs:2)
- Companilactobacillus heilongjiangensis (isolates:2; rSTs:1)
- Companilactobacillus huachuanensis (isolates:1; rSTs:1)
- Companilactobacillus hulinensis (isolates:1; rSTs:1)
- Companilactobacillus insicii (isolates:1; rSTs:1)
- Companilactobacillus jidongensis (isolates:1; rSTs:1)
- Companilactobacillus kedongensis (isolates:1; rSTs:1)
- Companilactobacillus keshanensis (isolates:1; rSTs:1)
- Companilactobacillus kimchiensis (isolates:1; rSTs:1)
- Companilactobacillus kimchii (isolates:4; rSTs:1)
- Companilactobacillus metriopterae (isolates:1; rSTs:1)
- Companilactobacillus mindensis (isolates:2; rSTs:1)
- Companilactobacillus mishanensis (isolates:4; rSTs:4 tree)
- Companilactobacillus musae (isolates:2; rSTs:1)
- Companilactobacillus nantensis (isolates:2; rSTs:1)
- Companilactobacillus nodensis (isolates:3; rSTs:1)
- Companilactobacillus nuruki (isolates:1; rSTs:1)
- Companilactobacillus pabuli (isolates:2; rSTs:2)
- Companilactobacillus paralimentarius (isolates:5; rSTs:2)
- Companilactobacillus sp. (isolates:4; rSTs:5)
- Companilactobacillus suantsaicola (isolates:1; rSTs:1)
- Companilactobacillus tucceti (isolates:1; rSTs:1)
- Companilactobacillus versmoldensis (isolates:2; rSTs:1)
- Companilactobacillus zhachilii (isolates:2; rSTs:2)
- Companilactobacillus zhongbaensis (isolates:1; rSTs:1)
- Convivina (isolates:6; rSTs:2 tree)
- Dellaglioa (isolates:24; rSTs:10 tree)
- Fructilactobacillus (isolates:70; rSTs:40 tree)
- Fructilactobacillus carniphilus (isolates:1; rSTs:1)
- Fructilactobacillus cliffordii (isolates:2; rSTs:2)
- Fructilactobacillus florum (isolates:3; rSTs:3 tree)
- Fructilactobacillus fructivorans (isolates:14; rSTs:5 tree)
- Fructilactobacillus hinvesii (isolates:1; rSTs:1)
- Fructilactobacillus ixorae (isolates:1; rSTs:1)
- Fructilactobacillus lindneri (isolates:12; rSTs:3 tree)
- Fructilactobacillus myrtifloralis (isolates:1; rSTs:1)
- Fructilactobacillus sanfranciscensis (isolates:35; rSTs:23 tree)
- Fructobacillus (isolates:24; rSTs:20 tree)
- Fructobacillus americanaquae (isolates:1; rSTs:1)
- Fructobacillus apis (isolates:1; rSTs:1)
- Fructobacillus broussonetiae (isolates:1; rSTs:1)
- Fructobacillus cardui (isolates:1; rSTs:1)
- Fructobacillus durionis (isolates:1; rSTs:1)
- Fructobacillus ficulneus (isolates:1; rSTs:1)
- Fructobacillus fructosus (isolates:6; rSTs:4 tree)
- Fructobacillus papyriferae (isolates:2; rSTs:1)
- Fructobacillus papyrifericola (isolates:1; rSTs:1)
- Fructobacillus parabroussonetiae (isolates:2; rSTs:2)
- Fructobacillus pseudoficulneus (isolates:2; rSTs:1)
- Fructobacillus sp. (isolates:2; rSTs:2 tree)
- Fructobacillus tropaeoli (isolates:3; rSTs:3 tree)
- Furfurilactobacillus (isolates:16; rSTs:8 tree)
- Holzapfeliella (isolates:1; rSTs:1)
- Holzapfeliella floricola (isolates:1; rSTs:1)
- Lacticaseibacillus (isolates:985; rSTs:407 tree)
- Lacticaseibacillus absianus (isolates:1; rSTs:1)
- Lacticaseibacillus baoqingensis (isolates:1; rSTs:1)
- Lacticaseibacillus brantae (isolates:1; rSTs:1)
- Lacticaseibacillus camelliae (isolates:2; rSTs:1)
- Lacticaseibacillus casei (isolates:20; rSTs:3 tree)
- Lacticaseibacillus chiayiensis (isolates:4; rSTs:4 tree)
- Lacticaseibacillus daqingensis (isolates:1; rSTs:1)
- Lacticaseibacillus hegangensis (isolates:1; rSTs:1)
- Lacticaseibacillus huelsenbergensis (isolates:2; rSTs:2)
- Lacticaseibacillus hulanensis (isolates:1; rSTs:1)
- Lacticaseibacillus jixianensis (isolates:1; rSTs:1)
- Lacticaseibacillus kribbianus (isolates:1; rSTs:1)
- Lacticaseibacillus manihotivorans (isolates:2; rSTs:1)
- Lacticaseibacillus mingshuiensis (isolates:3; rSTs:3 tree)
- Lacticaseibacillus nasuensis (isolates:3; rSTs:2)
- Lacticaseibacillus pabuli (isolates:1)
- Lacticaseibacillus pantheris (isolates:4; rSTs:2)
- Lacticaseibacillus paracasei (isolates:391; rSTs:225 tree)
- Lacticaseibacillus parakribbianus (isolates:1; rSTs:1)
- Lacticaseibacillus porcinae (isolates:1; rSTs:1)
- Lacticaseibacillus rhamnosus (isolates:511; rSTs:130 tree)
- Lacticaseibacillus saniviri (isolates:4; rSTs:1)
- Lacticaseibacillus sharpeae (isolates:2; rSTs:1)
- Lacticaseibacillus songhuajiangensis (isolates:1; rSTs:1)
- Lacticaseibacillus sp. (isolates:8; rSTs:6 tree)
- Lacticaseibacillus suibinensis (isolates:2; rSTs:2)
- Lacticaseibacillus suilingensis (isolates:2; rSTs:2)
- Lacticaseibacillus thailandensis (isolates:2; rSTs:2)
- Lacticaseibacillus yichunensis (isolates:1; rSTs:1)
- Lacticaseibacillus zeae (isolates:9; rSTs:7 tree)
- Lacticaseibacillus zhaodongensis (isolates:1; rSTs:1)
- Lactiplantibacillus (isolates:1309; rSTs:537 tree)
- Lactiplantibacillus argentoratensis (isolates:15; rSTs:9 tree)
- Lactiplantibacillus brownii (isolates:1; rSTs:1)
- Lactiplantibacillus carotarum (isolates:1; rSTs:1)
- Lactiplantibacillus daoliensis (isolates:1; rSTs:1)
- Lactiplantibacillus daowaiensis (isolates:1)
- Lactiplantibacillus dongliensis (isolates:1; rSTs:1)
- Lactiplantibacillus fabifermentans (isolates:3; rSTs:2)
- Lactiplantibacillus garii (isolates:1; rSTs:1)
- Lactiplantibacillus herbarum (isolates:1; rSTs:1)
- Lactiplantibacillus modestisalitolerans (isolates:1; rSTs:1)
- Lactiplantibacillus mudanjiangensis (isolates:5; rSTs:3 tree)
- Lactiplantibacillus nangangensis (isolates:1; rSTs:1)
- Lactiplantibacillus paraplantarum (isolates:21; rSTs:14 tree)
- Lactiplantibacillus pentosus (isolates:96; rSTs:57 tree)
- Lactiplantibacillus pingfangensis (isolates:1; rSTs:1)
- Lactiplantibacillus plajomi (isolates:1; rSTs:1)
- Lactiplantibacillus plantarum (isolates:1149; rSTs:434 tree)
- Lactiplantibacillus songbeiensis (isolates:1; rSTs:1)
- Lactiplantibacillus sp. (isolates:7; rSTs:6 tree)
- Lactiplantibacillus xiangfangensis (isolates:1; rSTs:1)
- Lactobacillus (isolates:2123; rSTs:1042 tree)
- Lactobacillus acetotolerans (isolates:8; rSTs:6 tree)
- Lactobacillus acidophilus (isolates:138; rSTs:24 tree)
- Lactobacillus agrestimuris (isolates:1; rSTs:1)
- Lactobacillus amylolyticus (isolates:7; rSTs:4 tree)
- Lactobacillus amylovorus (isolates:54; rSTs:48 tree)
- Lactobacillus apis (isolates:7; rSTs:6 tree)
- Lactobacillus bombicola (isolates:5; rSTs:4 tree)
- Lactobacillus colini (isolates:1; rSTs:1)
- Lactobacillus corticis (isolates:1; rSTs:1)
- Lactobacillus crispatus (isolates:423; rSTs:151 tree)
- Lactobacillus delbrueckii (isolates:500; rSTs:282 tree)
- Lactobacillus equicursoris (isolates:4; rSTs:3 tree)
- Lactobacillus gallinarum (isolates:14; rSTs:11 tree)
- Lactobacillus gasseri (isolates:209; rSTs:51 tree)
- Lactobacillus gigeriorum (isolates:2; rSTs:1)
- Lactobacillus hamsteri (isolates:2; rSTs:1)
- Lactobacillus helsingborgensis (isolates:6; rSTs:5 tree)
- Lactobacillus helveticus (isolates:200; rSTs:116 tree)
- Lactobacillus hominis (isolates:4; rSTs:2)
- Lactobacillus huangpiensis (isolates:2; rSTs:2)
- Lactobacillus iners (isolates:73; rSTs:43 tree)
- Lactobacillus intestinalis (isolates:10; rSTs:6 tree)
- Lactobacillus isalae (isolates:1; rSTs:1)
- Lactobacillus jensenii (isolates:99; rSTs:43 tree)
- Lactobacillus johnsonii (isolates:84; rSTs:62 tree)
- Lactobacillus kalixensis (isolates:1; rSTs:1)
- Lactobacillus kefiranofaciens (isolates:16; rSTs:9 tree)
- Lactobacillus kimbladii (isolates:1; rSTs:1)
- Lactobacillus kitasatonis (isolates:3; rSTs:2)
- Lactobacillus kullabergensis (isolates:3; rSTs:3 tree)
- Lactobacillus laiwuensis (isolates:1; rSTs:1)
- Lactobacillus leichmannii (isolates:1; rSTs:1)
- Lactobacillus melliventris (isolates:4; rSTs:4 tree)
- Lactobacillus mulieris (isolates:49; rSTs:19 tree)
- Lactobacillus nasalidis (isolates:3; rSTs:1)
- Lactobacillus panisapium (isolates:6; rSTs:6 tree)
- Lactobacillus paragasseri (isolates:64; rSTs:43 tree)
- Lactobacillus pasteurii (isolates:3; rSTs:1)
- Lactobacillus porci (isolates:1; rSTs:1)
- Lactobacillus psittaci (isolates:3; rSTs:1)
- Lactobacillus rodentium (isolates:2; rSTs:1)
- Lactobacillus selangorensis (isolates:2; rSTs:1)
- Lactobacillus sp. (isolates:67; rSTs:56 tree)
- Lactobacillus taiwanensis (isolates:30; rSTs:10 tree)
- Lactobacillus terrae (isolates:1; rSTs:1)
- Lactobacillus ultunensis (isolates:4; rSTs:2)
- Lactobacillus xujianguonis (isolates:2; rSTs:2)
- Lactobacillus xylocopicola (isolates:1)
- Lapidilactobacillus (isolates:11; rSTs:9 tree)
- Lapidilactobacillus achengensis (isolates:1; rSTs:1)
- Lapidilactobacillus bayanensis (isolates:1; rSTs:1)
- Lapidilactobacillus concavus (isolates:2; rSTs:1)
- Lapidilactobacillus dextrinicus (isolates:3; rSTs:2)
- Lapidilactobacillus gannanensis (isolates:1; rSTs:1)
- Lapidilactobacillus luobeiensis (isolates:1; rSTs:1)
- Lapidilactobacillus mulanensis (isolates:1; rSTs:1)
- Lapidilactobacillus wuchangensis (isolates:1; rSTs:1)
- Latilactobacillus (isolates:184; rSTs:123 tree)
- Lentilactobacillus (isolates:146; rSTs:79 tree)
- Lentilactobacillus buchneri (isolates:43; rSTs:22 tree)
- Lentilactobacillus curieae (isolates:1; rSTs:1)
- Lentilactobacillus dabitei (isolates:2; rSTs:1)
- Lentilactobacillus diolivorans (isolates:3; rSTs:1)
- Lentilactobacillus farraginis (isolates:2; rSTs:2)
- Lentilactobacillus fungorum (isolates:1; rSTs:1)
- Lentilactobacillus hilgardii (isolates:16; rSTs:10 tree)
- Lentilactobacillus kefiri (isolates:14; rSTs:5 tree)
- Lentilactobacillus kisonensis (isolates:2; rSTs:2)
- Lentilactobacillus kosonis (isolates:1; rSTs:1)
- Lentilactobacillus kribbianus (isolates:1; rSTs:1)
- Lentilactobacillus laojiaonis (isolates:1; rSTs:1)
- Lentilactobacillus otakiensis (isolates:5; rSTs:3 tree)
- Lentilactobacillus parabuchneri (isolates:34; rSTs:15 tree)
- Lentilactobacillus parafarraginis (isolates:5; rSTs:3 tree)
- Lentilactobacillus parakefiri (isolates:3; rSTs:2)
- Lentilactobacillus raoultii (isolates:1; rSTs:1)
- Lentilactobacillus rapi (isolates:2; rSTs:1)
- Lentilactobacillus senioris (isolates:3; rSTs:1)
- Lentilactobacillus sp. (isolates:4; rSTs:3 tree)
- Lentilactobacillus sunkii (isolates:2; rSTs:2)
- Leuconostoc (isolates:465; rSTs:344 tree)
- Leuconostoc carnosum (isolates:20; rSTs:14 tree)
- Leuconostoc citreum (isolates:59; rSTs:49 tree)
- Leuconostoc falkenbergense (isolates:19; rSTs:17 tree)
- Leuconostoc fallax (isolates:4; rSTs:2)
- Leuconostoc garlicum (isolates:1; rSTs:1)
- Leuconostoc gasicomitatum (isolates:33; rSTs:23 tree)
- Leuconostoc gelidum (isolates:20; rSTs:12 tree)
- Leuconostoc holzapfelii (isolates:3; rSTs:2)
- Leuconostoc inhae (isolates:1; rSTs:1)
- Leuconostoc kimchii (isolates:2; rSTs:2)
- Leuconostoc lactis (isolates:13; rSTs:11 tree)
- Leuconostoc litchii (isolates:2; rSTs:1)
- Leuconostoc mesenteroides (isolates:235; rSTs:156 tree)
- Leuconostoc miyukkimchii (isolates:1; rSTs:1)
- Leuconostoc palmae (isolates:1; rSTs:1)
- Leuconostoc pseudomesenteroides (isolates:16; rSTs:12 tree)
- Leuconostoc rapi (isolates:2; rSTs:1)
- Leuconostoc sp. (isolates:8; rSTs:19 tree)
- Leuconostoc suionicum (isolates:25; rSTs:19 tree)
- Levilactobacillus (isolates:203; rSTs:132 tree)
- Levilactobacillus acidifarinae (isolates:2; rSTs:1)
- Levilactobacillus andaensis (isolates:1; rSTs:1)
- Levilactobacillus angrenensis (isolates:1; rSTs:1)
- Levilactobacillus brevis (isolates:150; rSTs:92 tree)
- Levilactobacillus cerevisiae (isolates:1; rSTs:1)
- Levilactobacillus enshiensis (isolates:1; rSTs:1)
- Levilactobacillus fujinensis (isolates:1; rSTs:1)
- Levilactobacillus fuyuanensis (isolates:1; rSTs:1)
- Levilactobacillus hammesii (isolates:1; rSTs:1)
- Levilactobacillus huananensis (isolates:1; rSTs:1)
- Levilactobacillus humaensis (isolates:1; rSTs:1)
- Levilactobacillus koreensis (isolates:2; rSTs:1)
- Levilactobacillus lanxiensis (isolates:1; rSTs:1)
- Levilactobacillus lindianensis (isolates:1; rSTs:1)
- Levilactobacillus mulengensis (isolates:1; rSTs:1)
- Levilactobacillus namurensis (isolates:7; rSTs:4 tree)
- Levilactobacillus parabrevis (isolates:6; rSTs:3 tree)
- Levilactobacillus paucivorans (isolates:1; rSTs:1)
- Levilactobacillus senmaizukei (isolates:2; rSTs:1)
- Levilactobacillus sp. (isolates:3; rSTs:2)
- Levilactobacillus spicheri (isolates:3; rSTs:2)
- Levilactobacillus suantsaii (isolates:2; rSTs:2)
- Levilactobacillus suantsaiihabitans (isolates:1; rSTs:1)
- Levilactobacillus tangyuanensis (isolates:1; rSTs:1)
- Levilactobacillus tongjiangensis (isolates:1; rSTs:1)
- Levilactobacillus tujiorum (isolates:2; rSTs:2)
- Levilactobacillus wangkuiensis (isolates:2; rSTs:2)
- Levilactobacillus yiduensis (isolates:1; rSTs:1)
- Levilactobacillus yonginensis (isolates:1; rSTs:1)
- Levilactobacillus zymae (isolates:4; rSTs:2)
- Ligilactobacillus (isolates:536; rSTs:322 tree)
- Ligilactobacillus acidipiscis (isolates:10; rSTs:5 tree)
- Ligilactobacillus agilis (isolates:39; rSTs:23 tree)
- Ligilactobacillus animalis (isolates:17; rSTs:12 tree)
- Ligilactobacillus apodemi (isolates:3; rSTs:2)
- Ligilactobacillus araffinosus (isolates:1; rSTs:1)
- Ligilactobacillus aviarius (isolates:29; rSTs:16 tree)
- Ligilactobacillus ceti (isolates:3; rSTs:1)
- Ligilactobacillus cholophilus (isolates:1; rSTs:1)
- Ligilactobacillus equi (isolates:5; rSTs:4 tree)
- Ligilactobacillus faecis (isolates:1; rSTs:1)
- Ligilactobacillus hayakitensis (isolates:2; rSTs:1)
- Ligilactobacillus murinus (isolates:64; rSTs:23 tree)
- Ligilactobacillus pabuli (isolates:1; rSTs:1)
- Ligilactobacillus pobuzihii (isolates:6; rSTs:2)
- Ligilactobacillus ruminis (isolates:68; rSTs:31 tree)
- Ligilactobacillus saerimneri (isolates:9; rSTs:8 tree)
- Ligilactobacillus salitolerans (isolates:1; rSTs:1)
- Ligilactobacillus salivarius (isolates:272; rSTs:185 tree)
- Ligilactobacillus sp. (isolates:3; rSTs:3 tree)
- Ligilactobacillus ubinensis (isolates:1; rSTs:1)
- Limosilactobacillus (isolates:849; rSTs:519 tree)
- Limosilactobacillus agrestimuris (isolates:1; rSTs:1)
- Limosilactobacillus agrestis (isolates:6; rSTs:5 tree)
- Limosilactobacillus albertensis (isolates:5; rSTs:2)
- Limosilactobacillus alvi (isolates:1; rSTs:1)
- Limosilactobacillus antri (isolates:7; rSTs:4 tree)
- Limosilactobacillus avistercoris (isolates:1; rSTs:1)
- Limosilactobacillus avium (isolates:1)
- Limosilactobacillus balticus (isolates:5; rSTs:4 tree)
- Limosilactobacillus caccae (isolates:1; rSTs:1)
- Limosilactobacillus caecicola (isolates:1; rSTs:1)
- Limosilactobacillus caviae (isolates:2; rSTs:2)
- Limosilactobacillus coleohominis (isolates:4; rSTs:3 tree)
- Limosilactobacillus equigenerosi (isolates:3; rSTs:1)
- Limosilactobacillus fastidiosus (isolates:6; rSTs:2)
- Limosilactobacillus fermentum (isolates:236; rSTs:169 tree)
- Limosilactobacillus frumenti (isolates:3; rSTs:2)
- Limosilactobacillus galli (isolates:1)
- Limosilactobacillus gastricus (isolates:10; rSTs:3 tree)
- Limosilactobacillus gorillae (isolates:1; rSTs:1)
- Limosilactobacillus ingluviei (isolates:9; rSTs:7 tree)
- Limosilactobacillus kribbianus (isolates:1; rSTs:1)
- Limosilactobacillus mucosae (isolates:34; rSTs:25 tree)
- Limosilactobacillus oris (isolates:24; rSTs:18 tree)
- Limosilactobacillus panis (isolates:3; rSTs:3 tree)
- Limosilactobacillus pontis (isolates:27; rSTs:8 tree)
- Limosilactobacillus portuensis (isolates:4; rSTs:4 tree)
- Limosilactobacillus pulli (isolates:2)
- Limosilactobacillus reuteri (isolates:392; rSTs:204 tree)
- Limosilactobacillus rudii (isolates:3; rSTs:1)
- Limosilactobacillus secaliphilus (isolates:1; rSTs:1)
- Limosilactobacillus sp. (isolates:2; rSTs:11 tree)
- Limosilactobacillus urinaemulieris (isolates:2; rSTs:2)
- Limosilactobacillus vaginalis (isolates:47; rSTs:29 tree)
- Limosilactobacillus viscerum (isolates:1)
- Limosilactobacillus walteri (isolates:1; rSTs:1)
- [Lactobacillus] timonensis (isolates:1; rSTs:1)
- Liquorilactobacillus (isolates:39; rSTs:26 tree)
- Liquorilactobacillus aquaticus (isolates:1; rSTs:1)
- Liquorilactobacillus cacaonum (isolates:1; rSTs:1)
- Liquorilactobacillus capillatus (isolates:1; rSTs:1)
- Liquorilactobacillus ghanensis (isolates:1; rSTs:1)
- Liquorilactobacillus hordei (isolates:4; rSTs:3 tree)
- Liquorilactobacillus mali (isolates:8; rSTs:4 tree)
- Liquorilactobacillus nagelii (isolates:6; rSTs:3 tree)
- Liquorilactobacillus oeni (isolates:1; rSTs:1)
- Liquorilactobacillus satsumensis (isolates:7; rSTs:5 tree)
- Liquorilactobacillus sicerae (isolates:1; rSTs:1)
- Liquorilactobacillus sucicola (isolates:2; rSTs:1)
- Liquorilactobacillus uvarum (isolates:3; rSTs:2)
- Liquorilactobacillus vini (isolates:3; rSTs:2)
- Loigolactobacillus (isolates:31; rSTs:20 tree)
- Loigolactobacillus backii (isolates:11; rSTs:7 tree)
- Loigolactobacillus bifermentans (isolates:2; rSTs:1)
- Loigolactobacillus binensis (isolates:1; rSTs:1)
- Loigolactobacillus coryniformis (isolates:13; rSTs:7 tree)
- Loigolactobacillus iwatensis (isolates:1; rSTs:1)
- Loigolactobacillus jiayinensis (isolates:1; rSTs:1)
- Loigolactobacillus rennini (isolates:1; rSTs:1)
- Loigolactobacillus zhaoyuanensis (isolates:1; rSTs:1)
- Nicoliella (isolates:1; rSTs:1)
- Nicoliella spurrieriana (isolates:1; rSTs:1)
- Oenococcus (isolates:257; rSTs:104 tree)
- Paucilactobacillus (isolates:11; rSTs:8 tree)
- Paucilactobacillus hokkaidonensis (isolates:2; rSTs:1)
- Paucilactobacillus kaifaensis (isolates:1)
- Paucilactobacillus nenjiangensis (isolates:2; rSTs:2)
- Paucilactobacillus oligofermentans (isolates:2; rSTs:2)
- Paucilactobacillus suebicus (isolates:2; rSTs:1)
- Paucilactobacillus vaccinostercus (isolates:1; rSTs:1)
- Paucilactobacillus wasatchensis (isolates:1; rSTs:1)
- Pediococcus (isolates:475; rSTs:236 tree)
- Pediococcus acidilactici (isolates:273; rSTs:91 tree)
- Pediococcus argentinicus (isolates:3; rSTs:1)
- Pediococcus cellicola (isolates:2; rSTs:1)
- Pediococcus claussenii (isolates:4; rSTs:1)
- Pediococcus damnosus (isolates:12; rSTs:12 tree)
- Pediococcus ethanolidurans (isolates:12; rSTs:10 tree)
- Pediococcus inopinatus (isolates:7; rSTs:6 tree)
- Pediococcus parvulus (isolates:8; rSTs:6 tree)
- Pediococcus pentosaceus (isolates:149; rSTs:105 tree)
- Pediococcus sp. (isolates:3; rSTs:1)
- Pediococcus stilesii (isolates:2; rSTs:2)
- Periweissella (isolates:10; rSTs:6 tree)
- Philodulcilactobacillus (isolates:1; rSTs:1)
- Philodulcilactobacillus myokoensis (isolates:1; rSTs:1)
- Schleiferilactobacillus (isolates:15; rSTs:10 tree)
- Secundilactobacillus (isolates:35; rSTs:24 tree)
- Secundilactobacillus angelensis (isolates:2; rSTs:1)
- Secundilactobacillus collinoides (isolates:2; rSTs:2)
- Secundilactobacillus folii (isolates:1; rSTs:1)
- Secundilactobacillus hailunensis (isolates:1; rSTs:1)
- Secundilactobacillus kimchicus (isolates:7; rSTs:4 tree)
- Secundilactobacillus malefermentans (isolates:4; rSTs:2)
- Secundilactobacillus mixtipabuli (isolates:1; rSTs:1)
- Secundilactobacillus odoratitofui (isolates:1; rSTs:1)
- Secundilactobacillus oryzae (isolates:2; rSTs:1)
- Secundilactobacillus paracollinoides (isolates:5; rSTs:4 tree)
- Secundilactobacillus pentosiphilus (isolates:2; rSTs:2)
- Secundilactobacillus silagei (isolates:3; rSTs:1)
- Secundilactobacillus silagincola (isolates:1; rSTs:1)
- Secundilactobacillus similis (isolates:2; rSTs:1)
- Secundilactobacillus yichangensis (isolates:1; rSTs:1)
- Weissella (isolates:331; rSTs:221 tree)
- Weissella bombi (isolates:2; rSTs:1)
- Weissella ceti (isolates:2; rSTs:1)
- Weissella cibaria (isolates:99; rSTs:62 tree)
- Weissella coleopterorum (isolates:1; rSTs:1)
- Weissella confusa (isolates:121; rSTs:93 tree)
- Weissella diestrammenae (isolates:3; rSTs:1)
- Weissella fangxianensis (isolates:3; rSTs:1)
- Weissella halotolerans (isolates:3; rSTs:1)
- Weissella hellenica (isolates:4; rSTs:1)
- Weissella jogaejeotgali (isolates:1; rSTs:1)
- Weissella kandleri (isolates:1; rSTs:1)
- Weissella koreensis (isolates:7; rSTs:5 tree)
- Weissella minor (isolates:2; rSTs:2)
- Weissella muntiaci (isolates:1; rSTs:1)
- Weissella oryzae (isolates:1; rSTs:1)
- Weissella paramesenteroides (isolates:46; rSTs:18 tree)
- Weissella sagaensis (isolates:4; rSTs:4 tree)
- Weissella soli (isolates:7; rSTs:4 tree)
- Weissella sp. (isolates:3; rSTs:7 tree)
- Weissella thailandensis (isolates:4; rSTs:2)
- Weissella tructae (isolates:2; rSTs:2)
- Weissella uvarum (isolates:2; rSTs:1)
- Weissella viridescens (isolates:12; rSTs:10 tree)
- Acetilactobacillus (isolates:1; rSTs:1)
- Streptococcaceae (isolates:81821; rSTs:27830)
- Floricoccus (isolates:3; rSTs:3 tree)
- Lactococcus (isolates:965; rSTs:546 tree)
- Lactococcus allomyrinae (isolates:1; rSTs:1)
- Lactococcus carnosus (isolates:15; rSTs:12 tree)
- Lactococcus chungangensis (isolates:2; rSTs:1)
- Lactococcus cremoris (isolates:162; rSTs:69 tree)
- Lactococcus formosensis (isolates:54; rSTs:25 tree)
- Lactococcus fujiensis (isolates:1; rSTs:1)
- Lactococcus garvieae (isolates:61; rSTs:39 tree)
- Lactococcus hircilactis (isolates:1; rSTs:1)
- Lactococcus hodotermopsidis (isolates:1; rSTs:1)
- Lactococcus ileimucosae (isolates:1; rSTs:1)
- Lactococcus insecticola (isolates:1; rSTs:1)
- Lactococcus lactis (isolates:455; rSTs:268 tree)
- Lactococcus laudensis (isolates:8; rSTs:6)
- Lactococcus muris (isolates:1; rSTs:1)
- Lactococcus nasutitermitis (isolates:1; rSTs:1)
- Lactococcus paracarnosus (isolates:5; rSTs:4 tree)
- Lactococcus petauri (isolates:149; rSTs:62 tree)
- Lactococcus piscium (isolates:1; rSTs:1)
- Lactococcus plantarum (isolates:2; rSTs:1)
- Lactococcus protaetiae (isolates:1; rSTs:1)
- Lactococcus raffinolactis (isolates:15; rSTs:12 tree)
- Lactococcus reticulitermitis (isolates:1; rSTs:1)
- Lactococcus sp. (isolates:22; rSTs:32 tree)
- Lactococcus taiwanensis (isolates:3; rSTs:3 tree)
- Lactococcus termiticola (isolates:1; rSTs:1)
- Lactovum (isolates:1; rSTs:1)
- Lactovum miscens (isolates:1; rSTs:1)
- Streptococcus (isolates:80852; rSTs:27280)
- Streptococcus acidominimus (isolates:6; rSTs:3 tree)
- Streptococcus agalactiae (isolates:13277; rSTs:3428)
- Streptococcus alactolyticus (isolates:7; rSTs:10 tree)
- Streptococcus anginosus (isolates:74; rSTs:44 tree)
- Streptococcus australis (isolates:4; rSTs:5 tree)
- Streptococcus azizii (isolates:3; rSTs:1)
- Streptococcus bovimastitidis (isolates:1; rSTs:1)
- Streptococcus caballi (isolates:1; rSTs:1)
- Streptococcus canis (isolates:53; rSTs:31 tree)
- Streptococcus castoreus (isolates:1; rSTs:1)
- Streptococcus catagoni (isolates:3; rSTs:1)
- Streptococcus chenjunshii (isolates:3; rSTs:1)
- Streptococcus constellatus (isolates:30; rSTs:22 tree)
- Streptococcus criceti (isolates:3; rSTs:1)
- Streptococcus cristatus (isolates:35; rSTs:29 tree)
- Streptococcus cuniculi (isolates:3; rSTs:2)
- Streptococcus cuniculipharyngis (isolates:1; rSTs:1)
- Streptococcus danieliae (isolates:6; rSTs:4 tree)
- Streptococcus devriesei (isolates:1; rSTs:1)
- Streptococcus didelphis (isolates:3; rSTs:1)
- Streptococcus downei (isolates:2; rSTs:2)
- Streptococcus downii (isolates:1; rSTs:1)
- Streptococcus dysgalactiae (isolates:302; rSTs:272 tree)
- Streptococcus entericus (isolates:1; rSTs:1)
- Streptococcus equi (isolates:620; rSTs:176 tree)
- Streptococcus equinus (isolates:35; rSTs:30 tree)
- Streptococcus ferus (isolates:2; rSTs:1)
- Streptococcus gallinaceus (isolates:2; rSTs:2)
- Streptococcus gallolyticus (isolates:46; rSTs:58 tree)
- Streptococcus gordonii (isolates:99; rSTs:86 tree)
- Streptococcus halichoeri (isolates:21; rSTs:12 tree)
- Streptococcus halotolerans (isolates:1; rSTs:1)
- Streptococcus henryi (isolates:2; rSTs:2)
- Streptococcus hillyeri (isolates:1; rSTs:1)
- Streptococcus himalayensis (isolates:2; rSTs:1)
- Streptococcus hominis (isolates:1; rSTs:1)
- Streptococcus humanilactis (isolates:2; rSTs:1)
- Streptococcus hyointestinalis (isolates:2; rSTs:1)
- Streptococcus hyovaginalis (isolates:3; rSTs:3 tree)
- Streptococcus ictaluri (isolates:2; rSTs:1)
- Streptococcus ilei (isolates:2; rSTs:2)
- Streptococcus infantarius (isolates:159; rSTs:125 tree)
- Streptococcus infantis (isolates:23; rSTs:20 tree)
- Streptococcus iniae (isolates:98; rSTs:26 tree)
- Streptococcus intermedius (isolates:52; rSTs:60 tree)
- Streptococcus koreensis (isolates:6; rSTs:4 tree)
- Streptococcus lactarius (isolates:2; rSTs:2)
- Streptococcus loxodontisalivarius (isolates:1; rSTs:1)
- Streptococcus lutetiensis (isolates:47; rSTs:70 tree)
- Streptococcus macacae (isolates:3; rSTs:1)
- Streptococcus macedonicus (isolates:45; rSTs:15 tree)
- Streptococcus marimammalium (isolates:1; rSTs:1)
- Streptococcus marmotae (isolates:1; rSTs:1)
- Streptococcus massiliensis (isolates:3; rSTs:2)
- Streptococcus merionis (isolates:2; rSTs:1)
- Streptococcus minor (isolates:2; rSTs:3 tree)
- Streptococcus mitis (isolates:385; rSTs:347 tree)
- Streptococcus moroccensis (isolates:1; rSTs:1)
- Streptococcus mutans (isolates:572; rSTs:374 tree)
- Streptococcus oralis (isolates:214; rSTs:213 tree)
- Streptococcus oricebi (isolates:1; rSTs:1)
- Streptococcus orisasini (isolates:1; rSTs:1)
- Streptococcus oriscaviae (isolates:1; rSTs:1)
- Streptococcus orisratti (isolates:1; rSTs:1)
- Streptococcus ovis (isolates:1; rSTs:1)
- Streptococcus ovuberis (isolates:1; rSTs:1)
- Streptococcus pacificus (isolates:1; rSTs:1)
- Streptococcus panodentis (isolates:1; rSTs:1)
- Streptococcus pantholopis (isolates:1; rSTs:1)
- Streptococcus parasanguinis (isolates:113; rSTs:105 tree)
- Streptococcus parasuis (isolates:17; rSTs:16 tree)
- Streptococcus parauberis (isolates:34; rSTs:18 tree)
- Streptococcus pasteurianus (isolates:42; rSTs:47 tree)
- Streptococcus penaeicida (isolates:1; rSTs:1)
- Streptococcus periodonticum (isolates:2; rSTs:4 tree)
- Streptococcus peroris (isolates:1; rSTs:1)
- Streptococcus phocae (isolates:2; rSTs:2)
- Streptococcus pluranimalium (isolates:5; rSTs:6 tree)
- Streptococcus plurextorum (isolates:1; rSTs:1)
- Streptococcus pneumoniae (isolates:55092; rSTs:17714)
- Streptococcus porci (isolates:1; rSTs:1)
- Streptococcus porcinus (isolates:10; rSTs:6 tree)
- Streptococcus pseudopneumoniae (isolates:99; rSTs:125 tree)
- Streptococcus pseudoporcinus (isolates:11; rSTs:5 tree)
- Streptococcus pyogenes (isolates:4527; rSTs:1407)
- Streptococcus ratti (isolates:4; rSTs:3 tree)
- Streptococcus respiraculi (isolates:1; rSTs:1)
- Streptococcus rubneri (isolates:3; rSTs:2)
- Streptococcus ruminantium (isolates:38; rSTs:28 tree)
- Streptococcus ruminicola (isolates:4; rSTs:4 tree)
- Streptococcus salivarius (isolates:208; rSTs:146 tree)
- Streptococcus saliviloxodontae (isolates:1; rSTs:1)
- Streptococcus sanguinis (isolates:105; rSTs:106 tree)
- Streptococcus sciuri (isolates:1; rSTs:1)
- Streptococcus shenyangsis (isolates:1; rSTs:1)
- Streptococcus sinensis (isolates:4; rSTs:3 tree)
- Streptococcus sobrinus (isolates:52; rSTs:16 tree)
- Streptococcus sp. (isolates:357; rSTs:490 tree)
- Streptococcus suis (isolates:3181; rSTs:1177 tree)
- Streptococcus taonis (isolates:1)
- Streptococcus thalassemiae (isolates:1; rSTs:1)
- Streptococcus thermophilus (isolates:482; rSTs:206 tree)
- Streptococcus thoraltensis (isolates:2; rSTs:2)
- Streptococcus timonensis (isolates:2; rSTs:1)
- Streptococcus troglodytae (isolates:1; rSTs:1)
- Streptococcus uberis (isolates:118; rSTs:84 tree)
- Streptococcus urinalis (isolates:5; rSTs:1)
- Streptococcus vaginalis (isolates:1; rSTs:1)
- Streptococcus varani (isolates:1; rSTs:1)
- Streptococcus vestibularis (isolates:23; rSTs:13 tree)
- Streptococcus vicugnae (isolates:2; rSTs:1)
- Streptococcus xiaochunlingii (isolates:3; rSTs:9 tree)
- Streptococcus zalophi (isolates:2; rSTs:2)
- Aerococcaceae (isolates:219; rSTs:157 tree)
- Bacillales (isolates:169673; rSTs:41331)
- Clostridia (isolates:26748; rSTs:5115)
- Caldicellulosiruptorales (isolates:48; rSTs:16 tree)
- Caldicellulosiruptoraceae (isolates:48; rSTs:16 tree)
- Caldicellulosiruptor (isolates:48; rSTs:16 tree)
- Caldicellulosiruptor acetigenus (isolates:4; rSTs:3 tree)
- Caldicellulosiruptor bescii (isolates:23; rSTs:1)
- Caldicellulosiruptor changbaiensis (isolates:1; rSTs:1)
- Caldicellulosiruptor danielii (isolates:2; rSTs:1)
- Caldicellulosiruptor diazotrophicus (isolates:1; rSTs:1)
- Caldicellulosiruptor hydrothermalis (isolates:1; rSTs:1)
- Caldicellulosiruptor kronotskyensis (isolates:3; rSTs:1)
- Caldicellulosiruptor morganii (isolates:2; rSTs:1)
- Caldicellulosiruptor naganoensis (isolates:2; rSTs:1)
- Caldicellulosiruptor obsidiansis (isolates:5; rSTs:1)
- Caldicellulosiruptor owensensis (isolates:1; rSTs:1)
- Caldicellulosiruptor saccharolyticus (isolates:1; rSTs:1)
- Caldicellulosiruptor sp. (isolates:2; rSTs:2)
- Caldicellulosiruptor (isolates:48; rSTs:16 tree)
- Caldicellulosiruptoraceae (isolates:48; rSTs:16 tree)
- Christensenellales (isolates:19; rSTs:12)
- Christensenellaceae (isolates:19; rSTs:12)
- Candidatus Borkfalkia (isolates:1; rSTs:1)
- Candidatus Borkfalkia ceftriaxoniphila (isolates:1; rSTs:1)
- Christensenella (isolates:15; rSTs:8)
- Gehongia (isolates:1; rSTs:1)
- Gehongia tenuis (isolates:1; rSTs:1)
- Guopingia (isolates:1; rSTs:1)
- Guopingia tenuis (isolates:1; rSTs:1)
- Luoshenia (isolates:1; rSTs:1)
- Luoshenia tenuis (isolates:1; rSTs:1)
- Candidatus Borkfalkia (isolates:1; rSTs:1)
- Christensenellaceae (isolates:19; rSTs:12)
- Eubacteriales (isolates:4718; rSTs:2185)
- Acutalibacteraceae (isolates:30; rSTs:25)
- Acutalibacter (isolates:10; rSTs:8)
- Anaeromassilibacillus (isolates:8; rSTs:6)
- Caproicibacter (isolates:2; rSTs:2)
- Caproicibacter fermentans (isolates:2; rSTs:2)
- Caproiciproducens (isolates:5; rSTs:4)
- Hydrogeniiclostridium (isolates:2; rSTs:2)
- Hydrogeniiclostridium mannosilyticum (isolates:2; rSTs:2)
- Pseudoruminococcus (isolates:3; rSTs:3)
- Aristaeellaceae (isolates:4; rSTs:2)
- Bianqueaceae (isolates:1)
- Butyricicoccaceae (isolates:26; rSTs:20)
- Caldicoprobacteraceae (isolates:3; rSTs:3 tree)
- Clostridiaceae (isolates:3712; rSTs:1371)
- Abyssisolibacter (isolates:1; rSTs:1)
- Abyssisolibacter fermentans (isolates:1; rSTs:1)
- Anaeromonas (isolates:2; rSTs:2)
- Anaerophilus (isolates:1; rSTs:1)
- Anaerophilus nitritogenes (isolates:1; rSTs:1)
- Anoxynatronum (isolates:1)
- Anoxynatronum buryatiense (isolates:1)
- Caloramator (isolates:10; rSTs:8 tree)
- Candidatus Arthromitus (isolates:11; rSTs:7 tree)
- Clostridium (isolates:3608; rSTs:1287 tree)
- Clostridium aceticum (isolates:2; rSTs:1)
- Clostridium acetireducens (isolates:1; rSTs:1)
- Clostridium acetobutylicum (isolates:18; rSTs:3 tree)
- Clostridium acidisoli (isolates:1; rSTs:1)
- Clostridium aciditolerans (isolates:1; rSTs:1)
- Clostridium aestuarii (isolates:1; rSTs:1)
- Clostridium akagii (isolates:1; rSTs:1)
- Clostridium algidicarnis (isolates:15; rSTs:12 tree)
- Clostridium algifaecis (isolates:1; rSTs:1)
- Clostridium algoriphilum (isolates:1; rSTs:1)
- Clostridium amazonitimonense (isolates:2; rSTs:1)
- Clostridium aminobutyricum (isolates:1; rSTs:1)
- Clostridium amylolyticum (isolates:1; rSTs:1)
- Clostridium arbusti (isolates:1; rSTs:1)
- Clostridium argentinense (isolates:6; rSTs:1)
- Clostridium aromativorans (isolates:1; rSTs:1)
- Clostridium autoethanogenum (isolates:4; rSTs:1)
- Clostridium baratii (isolates:15; rSTs:11 tree)
- Clostridium beijerinckii (isolates:236; rSTs:32 tree)
- Clostridium bornimense (isolates:2; rSTs:2)
- Clostridium botulinum (isolates:1147; rSTs:197 tree)
- Clostridium bowmanii (isolates:2; rSTs:1)
- Clostridium brassicae (isolates:1)
- Clostridium butyricum (isolates:106; rSTs:47 tree)
- Clostridium cadaveris (isolates:11; rSTs:7 tree)
- Clostridium caldaquaticum (isolates:1; rSTs:1)
- Clostridium carboxidivorans (isolates:4; rSTs:1)
- Clostridium carnis (isolates:1; rSTs:1)
- Clostridium cavendishii (isolates:1; rSTs:1)
- Clostridium celatum (isolates:4; rSTs:3 tree)
- Clostridium cellulovorans (isolates:2; rSTs:1)
- Clostridium chauvoei (isolates:66; rSTs:19 tree)
- Clostridium chromiireducens (isolates:3; rSTs:3 tree)
- Clostridium chrysemydis (isolates:1; rSTs:1)
- Clostridium cibarium (isolates:1; rSTs:1)
- Clostridium cochlearium (isolates:12; rSTs:11 tree)
- Clostridium colicanis (isolates:1; rSTs:1)
- Clostridium collagenovorans (isolates:1; rSTs:1)
- Clostridium coskatii (isolates:2; rSTs:1)
- Clostridium culturomicium (isolates:2; rSTs:1)
- Clostridium cuniculi (isolates:2; rSTs:2)
- Clostridium cylindrosporum (isolates:1; rSTs:1)
- Clostridium disporicum (isolates:1; rSTs:1)
- Clostridium drakei (isolates:2; rSTs:1)
- Clostridium estertheticum (isolates:36; rSTs:19 tree)
- Clostridium faecium (isolates:1; rSTs:1)
- Clostridium fallax (isolates:2; rSTs:1)
- Clostridium felsineum (isolates:5; rSTs:4 tree)
- Clostridium fermenticellae (isolates:1; rSTs:1)
- Clostridium fessum (isolates:13; rSTs:13 tree)
- Clostridium folliculivorans (isolates:2; rSTs:1)
- Clostridium formicaceticum (isolates:2; rSTs:1)
- Clostridium frigidicarnis (isolates:1; rSTs:1)
- Clostridium frigoris (isolates:1; rSTs:1)
- Clostridium fungisolvens (isolates:1; rSTs:1)
- Clostridium gallinarum (isolates:1; rSTs:1)
- Clostridium ganghwense (isolates:1; rSTs:1)
- Clostridium gasigenes (isolates:10; rSTs:9 tree)
- Clostridium gelidum (isolates:1; rSTs:1)
- Clostridium grantii (isolates:1; rSTs:1)
- Clostridium haemolyticum (isolates:5; rSTs:3 tree)
- Clostridium hominis (isolates:1; rSTs:1)
- Clostridium homopropionicum (isolates:2; rSTs:1)
- Clostridium hydrogeniformans (isolates:1; rSTs:1)
- Clostridium hydrogenum (isolates:1; rSTs:1)
- Clostridium ihumii (isolates:2; rSTs:1)
- Clostridium indicum (isolates:1; rSTs:1)
- Clostridium intestinale (isolates:4; rSTs:4 tree)
- Clostridium isatidis (isolates:1; rSTs:1)
- Clostridium kluyveri (isolates:4; rSTs:3 tree)
- Clostridium lacusfryxellense (isolates:1; rSTs:1)
- Clostridium lamae (isolates:1)
- Clostridium liquoris (isolates:1; rSTs:1)
- Clostridium ljungdahlii (isolates:2; rSTs:1)
- Clostridium lundense (isolates:1; rSTs:1)
- Clostridium luticellarii (isolates:1; rSTs:1)
- Clostridium magnum (isolates:2; rSTs:1)
- Clostridium manihotivorum (isolates:1; rSTs:1)
- Clostridium massiliamazoniense (isolates:1; rSTs:1)
- Clostridium massiliodielmoense (isolates:2; rSTs:1)
- Clostridium mediterraneense (isolates:2; rSTs:1)
- Clostridium merdae (isolates:2; rSTs:1)
- Clostridium minihomine (isolates:1; rSTs:1)
- Clostridium mobile (isolates:1; rSTs:1)
- Clostridium moniliforme (isolates:1; rSTs:1)
- Clostridium muellerianum (isolates:1; rSTs:1)
- Clostridium neonatale (isolates:9; rSTs:4 tree)
- Clostridium niameyense (isolates:3; rSTs:2)
- Clostridium nigeriense (isolates:1; rSTs:1)
- Clostridium novyi (isolates:6; rSTs:5 tree)
- Clostridium oryzae (isolates:1; rSTs:1)
- Clostridium paraputrificum (isolates:45; rSTs:32 tree)
- Clostridium paridis (isolates:1; rSTs:1)
- Clostridium pascui (isolates:1; rSTs:1)
- Clostridium pasteurianum (isolates:8; rSTs:3 tree)
- Clostridium peptidivorans (isolates:1; rSTs:1)
- Clostridium perfringens (isolates:1243; rSTs:496 tree)
- Clostridium phoceensis (isolates:3; rSTs:2)
- Clostridium polyendosporum (isolates:1; rSTs:1)
- Clostridium polynesiense (isolates:2; rSTs:1)
- Clostridium porci (isolates:1; rSTs:1)
- Clostridium prolinivorans (isolates:1; rSTs:1)
- Clostridium psychrophilum (isolates:1; rSTs:1)
- Clostridium punense (isolates:1; rSTs:1)
- Clostridium puniceum (isolates:1; rSTs:1)
- Clostridium putrefaciens (isolates:1; rSTs:1)
- Clostridium ragsdalei (isolates:1; rSTs:1)
- Clostridium rectalis (isolates:1; rSTs:1)
- Clostridium rhizosphaerae (isolates:1; rSTs:1)
- Clostridium saccharobutylicum (isolates:64; rSTs:3 tree)
- Clostridium saccharoperbutylacetonicum (isolates:7; rSTs:2)
- Clostridium sardiniense (isolates:3; rSTs:2)
- Clostridium sartagoforme (isolates:1; rSTs:1)
- Clostridium saudiense (isolates:6; rSTs:5 tree)
- Clostridium scatologenes (isolates:1; rSTs:1)
- Clostridium senegalense (isolates:4; rSTs:3 tree)
- Clostridium septicum (isolates:7; rSTs:4 tree)
- Clostridium simiarum (isolates:1; rSTs:1)
- Clostridium sp. (isolates:118; rSTs:116 tree)
- Clostridium sporogenes (isolates:117; rSTs:39 tree)
- Clostridium sulfidigenes (isolates:1; rSTs:1)
- Clostridium swellfunianum (isolates:1; rSTs:1)
- Clostridium taeniosporum (isolates:1; rSTs:1)
- Clostridium tagluense (isolates:13; rSTs:5 tree)
- Clostridium tarantellae (isolates:1; rSTs:1)
- Clostridium tepidiprofundi (isolates:1; rSTs:1)
- Clostridium tepidum (isolates:4; rSTs:1)
- Clostridium tertium (isolates:8; rSTs:7 tree)
- Clostridium tetani (isolates:55; rSTs:29 tree)
- Clostridium tetanomorphum (isolates:6; rSTs:2)
- Clostridium thailandense (isolates:1; rSTs:1)
- Clostridium thermarum (isolates:3; rSTs:2)
- Clostridium thermobutyricum (isolates:3; rSTs:3 tree)
- Clostridium thermopalmarium (isolates:2; rSTs:1)
- Clostridium transplantifaecale (isolates:1; rSTs:1)
- Clostridium tunisiense (isolates:1)
- Clostridium tyrobutyricum (isolates:29; rSTs:19 tree)
- Clostridium uliginosum (isolates:1; rSTs:1)
- Clostridium vincentii (isolates:1; rSTs:1)
- Clostridium vitabionis (isolates:1; rSTs:1)
- Clostridium weizhouense (isolates:1; rSTs:1)
- Clostridium yunnanense (isolates:1; rSTs:1)
- Clostridium zeae (isolates:1; rSTs:1)
- Crassaminicella (isolates:3; rSTs:3 tree)
- Desnuesiella (isolates:1; rSTs:1)
- Desnuesiella massiliensis (isolates:1; rSTs:1)
- Falcatimonas (isolates:1; rSTs:1)
- Falcatimonas sp. (isolates:1; rSTs:1)
- Fervidicella (isolates:1; rSTs:1)
- Fervidicella metallireducens (isolates:1; rSTs:1)
- Fonticella (isolates:1; rSTs:1)
- Fonticella tunisiensis (isolates:1; rSTs:1)
- Haloimpatiens (isolates:2; rSTs:2)
- Hathewaya (isolates:4; rSTs:4 tree)
- Hungatella (isolates:25; rSTs:25 tree)
- Inconstantimicrobium (isolates:1; rSTs:1)
- Inconstantimicrobium porci (isolates:1; rSTs:1)
- Lactonifactor (isolates:13; rSTs:4 tree)
- Massilioclostridium (isolates:3; rSTs:2)
- Massilioclostridium coli (isolates:3; rSTs:2)
- Mordavella (isolates:1; rSTs:1)
- Mordavella massiliensis (isolates:1; rSTs:1)
- Oceanirhabdus (isolates:2; rSTs:2)
- Oxobacter (isolates:1; rSTs:1)
- Oxobacter pfennigii (isolates:1; rSTs:1)
- Proteiniclasticum (isolates:5; rSTs:4 tree)
- Sarcina (isolates:8; rSTs:6 tree)
- Senegalia (isolates:2; rSTs:2)
- Senegalia massiliensis (isolates:2; rSTs:2)
- Thermobrachium (isolates:2; rSTs:2)
- Thermobrachium celere (isolates:2; rSTs:2)
- Youngiibacter (isolates:2; rSTs:2)
- Abyssisolibacter (isolates:1; rSTs:1)
- Clostridiales Family XVI. Incertae Sedis (isolates:3; rSTs:3 tree)
- Clostridiales Family XVII. Incertae Sedis (isolates:18; rSTs:14 tree)
- Desulfallaceae (isolates:6; rSTs:6 tree)
- Desulfitobacteriaceae (isolates:49; rSTs:41 tree)
- Dehalobacter (isolates:11; rSTs:6 tree)
- Desulfitobacterium (isolates:13; rSTs:12 tree)
- Desulfitobacterium chlororespirans (isolates:1; rSTs:1)
- Desulfitobacterium dehalogenans (isolates:1; rSTs:1)
- Desulfitobacterium dichloroeliminans (isolates:1; rSTs:1)
- Desulfitobacterium hafniense (isolates:7; rSTs:6 tree)
- Desulfitobacterium metallireducens (isolates:1; rSTs:1)
- Desulfitobacterium sp. (isolates:2; rSTs:2)
- Desulfosporosinus (isolates:24; rSTs:22 tree)
- Candidatus Desulfosporosinus infrequens (isolates:1; rSTs:1)
- Desulfosporosinus acididurans (isolates:1; rSTs:1)
- Desulfosporosinus acidiphilus (isolates:1; rSTs:1)
- Desulfosporosinus fructosivorans (isolates:1; rSTs:1)
- Desulfosporosinus hippei (isolates:1; rSTs:1)
- Desulfosporosinus lacus (isolates:1; rSTs:1)
- Desulfosporosinus meridiei (isolates:1; rSTs:1)
- Desulfosporosinus metallidurans (isolates:1; rSTs:1)
- Desulfosporosinus nitroreducens (isolates:2; rSTs:2)
- Desulfosporosinus orientis (isolates:1; rSTs:1)
- Desulfosporosinus sp. (isolates:12; rSTs:10 tree)
- Desulfosporosinus youngiae (isolates:1; rSTs:1)
- Syntrophobotulus (isolates:1; rSTs:1)
- Syntrophobotulus glycolicus (isolates:1; rSTs:1)
- Desulfocucumaceae (isolates:1; rSTs:1)
- Desulfotomaculaceae (isolates:9; rSTs:7 tree)
- Desulfurisporaceae (isolates:1; rSTs:1)
- Eubacteriaceae (isolates:128; rSTs:98 tree)
- Acetobacterium (isolates:19; rSTs:14 tree)
- Acetobacterium bakii (isolates:4; rSTs:1)
- Acetobacterium dehalogenans (isolates:1; rSTs:1)
- Acetobacterium fimetarium (isolates:1; rSTs:1)
- Acetobacterium malicum (isolates:1; rSTs:1)
- Acetobacterium paludosum (isolates:2; rSTs:1)
- Acetobacterium sp. (isolates:2; rSTs:2)
- Acetobacterium tundrae (isolates:2; rSTs:1)
- Acetobacterium wieringae (isolates:5; rSTs:5 tree)
- Acetobacterium woodii (isolates:1; rSTs:1)
- Alkalibacter (isolates:3; rSTs:3 tree)
- Alkalibaculum (isolates:3; rSTs:2)
- Anaerofustis (isolates:9; rSTs:6 tree)
- Eubacterium (isolates:87; rSTs:66 tree)
- Eubacterium aggregans (isolates:1; rSTs:1)
- Eubacterium barkeri (isolates:1; rSTs:1)
- Eubacterium callanderi (isolates:22; rSTs:12 tree)
- Eubacterium coprostanoligenes (isolates:1; rSTs:1)
- Eubacterium limosum (isolates:7; rSTs:5 tree)
- Eubacterium maltosivorans (isolates:5; rSTs:4 tree)
- Eubacterium oxidoreducens (isolates:1; rSTs:1)
- Eubacterium plexicaudatum (isolates:1; rSTs:1)
- Eubacterium pyruvativorans (isolates:3; rSTs:5 tree)
- Eubacterium ramulus (isolates:10; rSTs:6 tree)
- Eubacterium ruminantium (isolates:4; rSTs:2)
- Eubacterium segne (isolates:1; rSTs:1)
- Eubacterium sp. (isolates:11; rSTs:9 tree)
- Eubacterium uniforme (isolates:1; rSTs:1)
- Eubacterium ventriosum (isolates:14; rSTs:13 tree)
- Eubacterium xylanophilum (isolates:1; rSTs:1)
- [Eubacterium] cellulosolvens (isolates:3; rSTs:2)
- Gallibacter (isolates:1; rSTs:1)
- Gallibacter intestinalis (isolates:1; rSTs:1)
- Garciella (isolates:2; rSTs:2)
- Garciella nitratireducens (isolates:2; rSTs:2)
- Irregularibacter (isolates:1; rSTs:1)
- Irregularibacter muris (isolates:1; rSTs:1)
- Pseudoramibacter (isolates:3; rSTs:3)
- Acetobacterium (isolates:19; rSTs:14 tree)
- Eubacteriales Family XII. Incertae Sedis (isolates:4; rSTs:4 tree)
- Eubacteriales Family XIII. Incertae Sedis (isolates:25; rSTs:19 tree)
- Baileyella (isolates:2; rSTs:2)
- Baileyella intestinalis (isolates:2; rSTs:2)
- Hominibacterium (isolates:2; rSTs:2)
- Hominibacterium faecale (isolates:2; rSTs:2)
- Hornefia (isolates:2; rSTs:2)
- Lentihominibacter (isolates:2; rSTs:1)
- Senimuribacter (isolates:2; rSTs:2)
- Senimuribacter intestinalis (isolates:2; rSTs:2)
- Sinanaerobacter (isolates:1; rSTs:1)
- Sinanaerobacter chloroacetimidivorans (isolates:1; rSTs:1)
- Zhenpiania (isolates:1; rSTs:1)
- Zhenpiania hominis (isolates:1; rSTs:1)
- Baileyella (isolates:2; rSTs:2)
- Feifaniaceae (isolates:1; rSTs:1)
- Gracilibacteraceae (isolates:1)
- Heliobacteriaceae (isolates:10; rSTs:8 tree)
- Maliibacteriaceae (isolates:1; rSTs:1)
- Oscillospiraceae (isolates:577; rSTs:469 tree)
- Acetanaerobacterium (isolates:1; rSTs:1)
- Acetanaerobacterium elongatum (isolates:1; rSTs:1)
- Acetivibrio (isolates:31; rSTs:19 tree)
- Acetivibrio cellulolyticus (isolates:2; rSTs:1)
- Acetivibrio clariflavus (isolates:4; rSTs:2)
- Acetivibrio ethanolgignens (isolates:2; rSTs:1)
- Acetivibrio mesophilus (isolates:1; rSTs:1)
- Acetivibrio saccincola (isolates:2; rSTs:2)
- Acetivibrio straminisolvens (isolates:2; rSTs:2)
- Acetivibrio thermocellus (isolates:18; rSTs:10 tree)
- Amygdalobacter (isolates:5; rSTs:4 tree)
- Anaerobacterium (isolates:1; rSTs:1)
- Anaerobacterium chartisolvens (isolates:1; rSTs:1)
- Anaerofilum (isolates:2; rSTs:2)
- Anaerotruncus (isolates:28; rSTs:26 tree)
- Angelakisella (isolates:1; rSTs:1)
- Angelakisella massiliensis (isolates:1; rSTs:1)
- Bittarella (ex Durand et al. 2017) (isolates:7; rSTs:6 tree)
- Brotocaccenecus (isolates:1; rSTs:1)
- Brotocaccenecus cirricatena (isolates:1; rSTs:1)
- Caproicibacterium (isolates:4; rSTs:3 tree)
- Congzhengia (isolates:1; rSTs:1)
- Congzhengia minquanensis (isolates:1; rSTs:1)
- Drancourtella (isolates:7; rSTs:5 tree)
- Dysosmobacter (isolates:6; rSTs:6 tree)
- Ethanoligenens (isolates:5; rSTs:1)
- Ethanoligenens harbinense (isolates:5; rSTs:1)
- Faecalibacterium (isolates:117; rSTs:126 tree)
- Faecalibacterium duncaniae (isolates:9; rSTs:6 tree)
- Faecalibacterium gallinarum (isolates:1; rSTs:1)
- Faecalibacterium hattorii (isolates:1; rSTs:1)
- Faecalibacterium hominis (ex Afrizal et al. 2022) (isolates:3; rSTs:3 tree)
- Faecalibacterium longum (isolates:2; rSTs:2)
- Faecalibacterium prausnitzii (isolates:64; rSTs:41 tree)
- Faecalibacterium sp. (isolates:37; rSTs:72 tree)
- Faecalispora (isolates:6)
- Fastidiosipila (isolates:1; rSTs:1)
- Fastidiosipila sanguinis (isolates:1; rSTs:1)
- Flavonifractor (isolates:83; rSTs:54 tree)
- Fournierella (isolates:4; rSTs:2)
- Fumia (isolates:1; rSTs:1)
- Fumia xinanensis (isolates:1; rSTs:1)
- Hominenteromicrobium (isolates:1; rSTs:1)
- Hominenteromicrobium mulieris (isolates:1; rSTs:1)
- Hominicoprocola (isolates:1; rSTs:1)
- Hominicoprocola fusiformis (isolates:1; rSTs:1)
- Hominilimicola (isolates:1)
- Hominilimicola fabiformis (isolates:1)
- Hominimerdicola (isolates:2; rSTs:2)
- Hominimerdicola aceti (isolates:2; rSTs:2)
- Huintestinicola (isolates:1; rSTs:1)
- Huintestinicola butyrica (isolates:1; rSTs:1)
- Hydrogenoanaerobacterium (isolates:2; rSTs:1)
- Hydrogenoanaerobacterium saccharovorans (isolates:2; rSTs:1)
- Lawsonibacter (isolates:3; rSTs:3 tree)
- Ligaoa (isolates:1; rSTs:1)
- Ligaoa zhengdingensis (isolates:1; rSTs:1)
- Mageeibacillus (isolates:3; rSTs:3 tree)
- Marasmitruncus (isolates:1; rSTs:1)
- Marasmitruncus massiliensis (isolates:1; rSTs:1)
- Massiliimalia (isolates:4; rSTs:4 tree)
- Merdimmobilis (isolates:3; rSTs:3 tree)
- Muriventricola (isolates:1; rSTs:1)
- Muriventricola aceti (isolates:1; rSTs:1)
- Neglectibacter (isolates:4; rSTs:2)
- Neglectibacter timonensis (isolates:4; rSTs:2)
- Neobittarella (isolates:2; rSTs:2)
- Neobittarella massiliensis (isolates:2; rSTs:2)
- Neopoerus (isolates:1; rSTs:1)
- Neopoerus faecalis (isolates:1; rSTs:1)
- Oscillibacter (isolates:3; rSTs:3 tree)
- Papillibacter (isolates:1; rSTs:1)
- Papillibacter cinnamivorans (isolates:1; rSTs:1)
- Petroclostridium (isolates:1; rSTs:1)
- Petroclostridium xylanilyticum (isolates:1; rSTs:1)
- Porcipelethomonas (isolates:1; rSTs:1)
- Porcipelethomonas ammoniilytica (isolates:1; rSTs:1)
- Provencibacterium (isolates:2; rSTs:1)
- Provencibacterium massiliense (isolates:2; rSTs:1)
- Pseudobacteroides (isolates:2; rSTs:1)
- Pseudobacteroides cellulosolvens (isolates:2; rSTs:1)
- Pseudoclostridium (isolates:5; rSTs:3)
- Pseudoclostridium thermosuccinogenes (isolates:5; rSTs:3)
- Pseudoflavonifractor (isolates:15; rSTs:16 tree)
- Pusillibacter (isolates:1; rSTs:1)
- Pusillibacter faecalis (isolates:1; rSTs:1)
- Pygmaiobacter (isolates:1; rSTs:1)
- Pygmaiobacter massiliensis (isolates:1; rSTs:1)
- Qingrenia (isolates:1)
- Qingrenia yutianensis (isolates:1)
- Ructibacterium (isolates:1)
- Ructibacterium gallinarum (isolates:1)
- Ruminiclostridium (isolates:11; rSTs:9 tree)
- Ruminiclostridium cellobioparum (isolates:2; rSTs:2)
- Ruminiclostridium cellulolyticum (isolates:1; rSTs:1)
- Ruminiclostridium herbifermentans (isolates:1; rSTs:1)
- Ruminiclostridium hungatei (isolates:1; rSTs:1)
- Ruminiclostridium josui (isolates:2; rSTs:1)
- Ruminiclostridium papyrosolvens (isolates:3; rSTs:2)
- Ruminiclostridium sufflavum (isolates:1; rSTs:1)
- Ruminococcus (isolates:126; rSTs:101 tree)
- Ruminococcus albus (isolates:8; rSTs:7 tree)
- Ruminococcus bicirculans (isolates:19; rSTs:13 tree)
- Ruminococcus bovis (isolates:1; rSTs:1)
- Ruminococcus bromii (isolates:24; rSTs:18 tree)
- Ruminococcus callidus (isolates:4; rSTs:3 tree)
- Ruminococcus champanellensis (isolates:2; rSTs:1)
- Ruminococcus difficilis (isolates:1)
- Ruminococcus flavefaciens (isolates:14; rSTs:13 tree)
- Ruminococcus gauvreauii (isolates:2; rSTs:1)
- Ruminococcus hominis (isolates:1; rSTs:1)
- Ruminococcus intestinalis (isolates:1; rSTs:1)
- Ruminococcus sp. (isolates:48; rSTs:41 tree)
- Ruminococcus turbiniformis (isolates:1; rSTs:1)
- Ruthenibacterium (isolates:30; rSTs:19 tree)
- Scatolibacter (isolates:1; rSTs:1)
- Scatolibacter rhodanostii (isolates:1; rSTs:1)
- Solibaculum (isolates:1; rSTs:1)
- Solibaculum mannosilyticum (isolates:1; rSTs:1)
- Sporobacter (isolates:1; rSTs:1)
- Sporobacter termitidis (isolates:1; rSTs:1)
- Subdoligranulum (isolates:3; rSTs:1)
- Subdoligranulum variabile (isolates:3; rSTs:1)
- Thermocaproicibacter (isolates:1)
- Thermocaproicibacter melissae (isolates:1)
- Thermoclostridium (isolates:7; rSTs:5 tree)
- Vermiculatibacterium (isolates:1; rSTs:1)
- Vermiculatibacterium agrestimuris (isolates:1; rSTs:1)
- Vescimonas (isolates:2; rSTs:2)
- Yanshouia (isolates:1; rSTs:1)
- Yanshouia hominis (isolates:1; rSTs:1)
- Youxingia (isolates:1; rSTs:1)
- Youxingia wuxianensis (isolates:1; rSTs:1)
- Zongyangia (isolates:1; rSTs:1)
- Zongyangia hominis (isolates:1; rSTs:1)
- Acetanaerobacterium (isolates:1; rSTs:1)
- Peptococcaceae (isolates:36; rSTs:33 tree)
- Acididesulfobacillus (isolates:2; rSTs:1)
- Acididesulfobacillus acetoxydans (isolates:2; rSTs:1)
- Candidatus Desulforudis (isolates:2; rSTs:1)
- Candidatus Desulforudis audaxviator (isolates:2; rSTs:1)
- Candidatus Dichloromethanomonas (isolates:1; rSTs:1)
- Candidatus Dichloromethanomonas elyunquensis (isolates:1; rSTs:1)
- Candidatus Formimonas (isolates:1; rSTs:1)
- Candidatus Formimonas warabiya (isolates:1; rSTs:1)
- Dehalobacterium (isolates:2; rSTs:2)
- Dehalobacterium formicoaceticum (isolates:2; rSTs:2)
- Desulfofalx (isolates:1; rSTs:1)
- Desulfofalx alkaliphila (isolates:1; rSTs:1)
- Desulfofarcimen (isolates:1; rSTs:1)
- Desulfofarcimen acetoxidans (isolates:1; rSTs:1)
- Desulfofundulus (isolates:8; rSTs:8 tree)
- Desulfofundulus australicus (isolates:1; rSTs:1)
- Desulfofundulus kuznetsovii (isolates:1; rSTs:1)
- Desulfofundulus luciae (isolates:1; rSTs:1)
- Desulfofundulus salinum (isolates:1; rSTs:1)
- Desulfofundulus sp. (isolates:1; rSTs:1)
- Desulfofundulus thermobenzoicus (isolates:1; rSTs:1)
- Desulfofundulus thermocisternus (isolates:1; rSTs:1)
- Desulfofundulus thermosubterraneus (isolates:1; rSTs:1)
- Desulfolucanica (isolates:1; rSTs:1)
- Desulfolucanica intricata (isolates:1; rSTs:1)
- Desulfonispora (isolates:1; rSTs:1)
- Desulfonispora thiosulfatigenes (isolates:1; rSTs:1)
- Desulforadius (isolates:1; rSTs:1)
- Desulforadius tongensis (isolates:1; rSTs:1)
- Desulforamulus (isolates:11; rSTs:11 tree)
- Desulforamulus aeronauticus (isolates:1; rSTs:1)
- Desulforamulus aquiferis (isolates:2; rSTs:2)
- Desulforamulus ferrireducens (isolates:1; rSTs:1)
- Desulforamulus hydrothermalis (isolates:2; rSTs:2)
- Desulforamulus profundi (isolates:1; rSTs:1)
- Desulforamulus putei (isolates:1; rSTs:1)
- Desulforamulus reducens (isolates:1; rSTs:1)
- Desulforamulus ruminis (isolates:2; rSTs:2)
- Paradesulfitobacterium (isolates:1)
- Paradesulfitobacterium ferrireducens (isolates:1)
- Peptococcus (isolates:1; rSTs:1)
- Peptococcus niger (isolates:1; rSTs:1)
- Phosphitispora (isolates:1; rSTs:1)
- Phosphitispora fastidiosa (isolates:1; rSTs:1)
- Thermanaerosceptrum (isolates:1; rSTs:1)
- Thermanaerosceptrum fracticalcis (isolates:1; rSTs:1)
- Acididesulfobacillus (isolates:2; rSTs:1)
- Proteinivoraceae (isolates:3; rSTs:3 tree)
- Pumilibacteraceae (isolates:3; rSTs:1)
- Symbiobacteriaceae (isolates:3; rSTs:2)
- Syntrophomonadaceae (isolates:7; rSTs:7 tree)
- Candidatus Syntrophocurvum (isolates:1; rSTs:1)
- Candidatus Syntrophocurvum alkaliphilum (isolates:1; rSTs:1)
- Syntrophomonas (isolates:4; rSTs:4 tree)
- Syntrophothermus (isolates:1; rSTs:1)
- Syntrophothermus lipocalidus (isolates:1; rSTs:1)
- Thermosyntropha (isolates:1; rSTs:1)
- Thermosyntropha lipolytica (isolates:1; rSTs:1)
- Candidatus Syntrophocurvum (isolates:1; rSTs:1)
- Thermincolaceae (isolates:2; rSTs:2)
- Xylanivirgaceae (isolates:1; rSTs:1)
- Yeguiaceae (isolates:1; rSTs:1)
- Acutalibacteraceae (isolates:30; rSTs:25)
- Halanaerobiales (isolates:51; rSTs:36 tree)
- Halanaerobiaceae (isolates:29; rSTs:19 tree)
- Halanaerobium (isolates:28; rSTs:18 tree)
- Halanaerobium congolense (isolates:15; rSTs:9 tree)
- Halanaerobium hydrogeniformans (isolates:1; rSTs:1)
- Halanaerobium kushneri (isolates:1; rSTs:1)
- Halanaerobium polyolivorans (isolates:1; rSTs:1)
- Halanaerobium praevalens (isolates:2; rSTs:1)
- Halanaerobium saccharolyticum (isolates:1; rSTs:1)
- Halanaerobium salsuginis (isolates:1; rSTs:1)
- Halanaerobium sp. (isolates:6; rSTs:3 tree)
- Iocasia (isolates:1; rSTs:1)
- Iocasia fonsfrigidae (isolates:1; rSTs:1)
- Halanaerobium (isolates:28; rSTs:18 tree)
- Halarsenatibacteraceae (isolates:2; rSTs:1)
- Halobacteroidaceae (isolates:18; rSTs:14 tree)
- Acetohalobium (isolates:1; rSTs:1)
- Acetohalobium arabaticum (isolates:1; rSTs:1)
- Frackibacter (isolates:4; rSTs:3 tree)
- Fuchsiella (isolates:1)
- Fuchsiella alkaliacetigena (isolates:1)
- Halanaerobacter (isolates:1; rSTs:1)
- Halanaerobacter jeridensis (isolates:1; rSTs:1)
- Halobacteroides (isolates:1; rSTs:1)
- Halobacteroides halobius (isolates:1; rSTs:1)
- Halonatronum (isolates:1; rSTs:1)
- Halonatronum saccharophilum (isolates:1; rSTs:1)
- Natroniella (isolates:2; rSTs:1)
- Orenia (isolates:5; rSTs:4 tree)
- Selenihalanaerobacter (isolates:1; rSTs:1)
- Selenihalanaerobacter shriftii (isolates:1; rSTs:1)
- Sporohalobacter (isolates:1; rSTs:1)
- Sporohalobacter salinus (isolates:1; rSTs:1)
- Acetohalobium (isolates:1; rSTs:1)
- Halothermotrichaceae (isolates:1; rSTs:1)
- Halanaerobiaceae (isolates:29; rSTs:19 tree)
- Koleobacterales (isolates:1; rSTs:1)
- Lachnospirales (isolates:1769; rSTs:1246)
- Anaerotignaceae (isolates:13; rSTs:10)
- Cellulosilyticaceae (isolates:4; rSTs:4)
- Defluviitaleaceae (isolates:3; rSTs:3)
- Lachnospiraceae (isolates:1742; rSTs:1222)
- Acetatifactor (isolates:3; rSTs:2)
- Acetitomaculum (isolates:1; rSTs:1)
- Acetitomaculum ruminis (isolates:1; rSTs:1)
- Aequitasia (isolates:2; rSTs:1)
- Aequitasia blattaphilus (isolates:2; rSTs:1)
- Agathobacter (isolates:115; rSTs:66)
- Anaerobium (isolates:1; rSTs:1)
- Anaerobium acetethylicum (isolates:1; rSTs:1)
- Anaerobutyricum (isolates:20; rSTs:16)
- Anaerocolumna (isolates:12; rSTs:11)
- Anaerocolumna aminovalerica (isolates:3; rSTs:3)
- Anaerocolumna cellulosilytica (isolates:2; rSTs:1)
- Anaerocolumna chitinilytica (isolates:1; rSTs:1)
- Anaerocolumna jejuensis (isolates:1; rSTs:1)
- Anaerocolumna sedimenticola (isolates:1; rSTs:1)
- Anaerocolumna sp. (isolates:3; rSTs:3)
- Anaerocolumna xylanovorans (isolates:1; rSTs:1)
- Anaeromicropila (isolates:2; rSTs:2)
- Anaeropeptidivorans (isolates:1; rSTs:1)
- Anaeropeptidivorans aminofermentans (isolates:1; rSTs:1)
- Anaerosacchariphilus (isolates:1; rSTs:1)
- Anaerosacchariphilus polymeriproducens (isolates:1; rSTs:1)
- Anaerosporobacter (isolates:2; rSTs:2)
- Anaerostipes (isolates:106; rSTs:67)
- Anaerostipes amylophilus (isolates:1; rSTs:1)
- Anaerostipes butyraticus (isolates:1; rSTs:1)
- Anaerostipes caccae (isolates:30; rSTs:10)
- Anaerostipes faecalis (isolates:1; rSTs:1)
- Anaerostipes hadrus (isolates:64; rSTs:45)
- Anaerostipes hominis (ex Lee et al. 2021) (isolates:3; rSTs:2)
- Anaerostipes rhamnosivorans (isolates:1; rSTs:1)
- Anaerostipes sp. (isolates:5; rSTs:6)
- Anthropogastromicrobium (isolates:2; rSTs:2)
- Anthropogastromicrobium aceti (isolates:2; rSTs:2)
- Bariatricus (isolates:6; rSTs:1)
- Bariatricus massiliensis (isolates:6; rSTs:1)
- Bilifractor (isolates:1; rSTs:1)
- Bilifractor porci (isolates:1; rSTs:1)
- Blautia (isolates:303; rSTs:221)
- Blautia acetigignens (isolates:1; rSTs:1)
- Blautia ammoniilytica (isolates:1; rSTs:1)
- Blautia argi (isolates:1; rSTs:1)
- Blautia caecimuris (isolates:2; rSTs:2)
- Blautia coccoides (isolates:5; rSTs:3)
- Blautia difficilis (isolates:1; rSTs:1)
- Blautia faecicola (isolates:1; rSTs:1)
- Blautia faecis (isolates:19; rSTs:18)
- Blautia glucerasea (isolates:1; rSTs:1)
- Blautia hansenii (isolates:5; rSTs:3)
- Blautia hominis (isolates:1; rSTs:1)
- Blautia hydrogenotrophica (isolates:6; rSTs:2)
- Blautia intestinalis (isolates:5; rSTs:5)
- Blautia liquoris (isolates:1; rSTs:1)
- Blautia luti (isolates:3; rSTs:2)
- Blautia marasmi (isolates:2; rSTs:2)
- Blautia massiliensis (isolates:33; rSTs:27)
- Blautia obeum (isolates:49; rSTs:41)
- Blautia producta (isolates:6; rSTs:2)
- Blautia pseudococcoides (isolates:4; rSTs:2)
- Blautia schinkii (isolates:7; rSTs:2)
- Blautia sp. (isolates:44; rSTs:47)
- Blautia stercoris (isolates:1; rSTs:1)
- Blautia wexlerae (isolates:104; rSTs:54)
- Brotaphodocola (isolates:1; rSTs:1)
- Brotaphodocola catenula (isolates:1; rSTs:1)
- Brotolimicola (isolates:2; rSTs:2)
- Brotolimicola acetigignens (isolates:2; rSTs:2)
- Brotonthovivens (isolates:1; rSTs:1)
- Brotonthovivens ammoniilytica (isolates:1; rSTs:1)
- Butyribacter (isolates:3; rSTs:3)
- Butyribacter intestini (isolates:3; rSTs:3)
- Butyrivibrio (isolates:45; rSTs:60)
- Candidatus Epulonipiscium (isolates:2; rSTs:1)
- Candidatus Epulopiscium viviparus (isolates:2; rSTs:1)
- Candidatus Galacturonibacter (isolates:1; rSTs:1)
- Candidatus Galacturonibacter soehngenii (isolates:1; rSTs:1)
- Catenibacillus (isolates:1; rSTs:1)
- Catenibacillus scindens (isolates:1; rSTs:1)
- Catonella (isolates:2; rSTs:2)
- Chordicoccus (isolates:1; rSTs:1)
- Chordicoccus furentiruminis (isolates:1; rSTs:1)
- Claveliimonas (isolates:4; rSTs:4)
- Claveliimonas bilis (isolates:4; rSTs:4)
- Coprococcus (isolates:119; rSTs:85)
- Coprococcus aceti (isolates:2; rSTs:2)
- Coprococcus ammoniilyticus (isolates:1; rSTs:1)
- Coprococcus catus (isolates:13; rSTs:11)
- Coprococcus comes (isolates:66; rSTs:40)
- Coprococcus eutactus (isolates:13; rSTs:5)
- Coprococcus hominis (ex Liu et al. 2022) (isolates:1; rSTs:1)
- Coprococcus sp. (isolates:23; rSTs:25)
- Cuneatibacter (isolates:1; rSTs:1)
- Cuneatibacter caecimuris (isolates:1; rSTs:1)
- Diplocloster (isolates:3; rSTs:3)
- Dorea (isolates:130; rSTs:100)
- Dorea acetigenes (isolates:1; rSTs:1)
- Dorea ammoniilytica (isolates:1; rSTs:1)
- Dorea amylophila (isolates:5; rSTs:5)
- Dorea formicigenerans (isolates:62; rSTs:35)
- Dorea hominis (isolates:1; rSTs:1)
- Dorea longicatena (isolates:45; rSTs:27)
- Dorea phocaeensis (isolates:3; rSTs:3)
- Dorea sp. (isolates:12; rSTs:27)
- Eisenbergiella (isolates:16; rSTs:15)
- Enterocloster (isolates:122; rSTs:75)
- Enterocloster alcoholdehydrogenati (isolates:1; rSTs:1)
- Enterocloster aldenensis (isolates:7; rSTs:6)
- Enterocloster asparagiformis (isolates:4; rSTs:3)
- Enterocloster bolteae (isolates:41; rSTs:27)
- Enterocloster citroniae (isolates:12; rSTs:9)
- Enterocloster clostridioformis (isolates:49; rSTs:22)
- Enterocloster hominis (isolates:1; rSTs:1)
- Enterocloster lavalensis (isolates:4; rSTs:4)
- Enterocloster sp. (isolates:3; rSTs:2)
- Extibacter (isolates:6; rSTs:3)
- Faecalicatena (isolates:10; rSTs:10)
- Faecalimonas (isolates:12; rSTs:6)
- Faecalimonas umbilicata (isolates:12; rSTs:6)
- Frisingicoccus (isolates:2; rSTs:1)
- Frisingicoccus caecimuris (isolates:2; rSTs:1)
- Fusicatenibacter (isolates:38; rSTs:20)
- Gallintestinimicrobium (isolates:2; rSTs:2)
- Gallintestinimicrobium propionicum (isolates:2; rSTs:2)
- Herbinix (isolates:3; rSTs:2)
- Hespellia (isolates:1; rSTs:1)
- Hespellia stercorisuis (isolates:1; rSTs:1)
- Hominifimenecus (isolates:1; rSTs:1)
- Hominifimenecus microfluidus (isolates:1; rSTs:1)
- Hominisplanchenecus (isolates:3; rSTs:3)
- Hominiventricola (isolates:1; rSTs:1)
- Hominiventricola filiformis (isolates:1; rSTs:1)
- Jingyaoa (isolates:1; rSTs:1)
- Jingyaoa shaoxingensis (isolates:1; rSTs:1)
- Johnsonella (isolates:1; rSTs:1)
- Johnsonella ignava (isolates:1; rSTs:1)
- Jutongia (isolates:2; rSTs:2)
- Kineothrix (isolates:3; rSTs:2)
- Konateibacter (isolates:1; rSTs:1)
- Konateibacter massiliensis (isolates:1; rSTs:1)
- Lachnoanaerobaculum (isolates:13; rSTs:11)
- Lachnobacterium (isolates:5; rSTs:6)
- Lachnobacterium bovis (isolates:5; rSTs:6)
- Lachnoclostridium (isolates:107; rSTs:62)
- Lachnoclostridium edouardi (isolates:2; rSTs:1)
- Lachnoclostridium phocaeense (isolates:1; rSTs:1)
- Lachnoclostridium phytofermentans (isolates:4; rSTs:3)
- Lachnoclostridium sp. (isolates:2; rSTs:1)
- [Clostridium] aminophilum (isolates:3; rSTs:2)
- [Clostridium] fimetarium (isolates:1; rSTs:1)
- [Clostridium] hylemonae (isolates:7; rSTs:4)
- [Clostridium] polysaccharolyticum (isolates:1; rSTs:1)
- [Clostridium] scindens (isolates:36; rSTs:20)
- [Clostridium] symbiosum (isolates:50; rSTs:28)
- Lachnospira (isolates:30; rSTs:25)
- Lachnotalea (isolates:2; rSTs:2)
- Lachnotalea glycerini (isolates:2; rSTs:2)
- Lacrimispora (isolates:12; rSTs:9)
- Lacrimispora aerotolerans (isolates:1; rSTs:1)
- Lacrimispora algidixylanolytica (isolates:1; rSTs:1)
- Lacrimispora amygdalina (isolates:1; rSTs:1)
- Lacrimispora celerecrescens (isolates:2; rSTs:2)
- Lacrimispora indolis (isolates:1; rSTs:1)
- Lacrimispora saccharolytica (isolates:2; rSTs:1)
- Lacrimispora sphenoides (isolates:3; rSTs:1)
- Lacrimispora xylanolytica (isolates:1; rSTs:1)
- Laedolimicola (isolates:1; rSTs:1)
- Laedolimicola ammoniilytica (isolates:1; rSTs:1)
- Lientehia (isolates:1; rSTs:1)
- Lientehia hominis (isolates:1; rSTs:1)
- Luxibacter (isolates:1; rSTs:1)
- Luxibacter massiliensis (isolates:1; rSTs:1)
- Marvinbryantia (isolates:25; rSTs:1)
- Marvinbryantia formatexigens (isolates:25; rSTs:1)
- Mediterraneibacter (isolates:246; rSTs:140)
- Mediterraneibacter agrestimuris (isolates:1; rSTs:1)
- Mediterraneibacter butyricigenes (isolates:1; rSTs:1)
- Mediterraneibacter catenae (isolates:1; rSTs:1)
- Mediterraneibacter faecis (isolates:39; rSTs:21)
- Mediterraneibacter glycyrrhizinilyticus (isolates:3; rSTs:3)
- Mediterraneibacter gnavus (isolates:139; rSTs:79)
- Mediterraneibacter hominis (isolates:1; rSTs:1)
- Mediterraneibacter massiliensis (isolates:2; rSTs:2)
- Mediterraneibacter sp. (isolates:2; rSTs:2)
- [Ruminococcus] lactaris (isolates:26; rSTs:13)
- [Ruminococcus] torques (isolates:31; rSTs:16)
- Merdimonas (isolates:3; rSTs:2)
- Merdimonas faecis (isolates:3; rSTs:2)
- Mobilisporobacter (isolates:1; rSTs:1)
- Mobilisporobacter senegalensis (isolates:1; rSTs:1)
- Mobilitalea (isolates:1; rSTs:1)
- Mobilitalea sibirica (isolates:1; rSTs:1)
- Moryella (isolates:1; rSTs:1)
- Moryella indoligenes (isolates:1; rSTs:1)
- Muricomes (isolates:1; rSTs:1)
- Muricomes intestini (isolates:1; rSTs:1)
- Muricoprocola (isolates:1; rSTs:1)
- Muricoprocola aceti (isolates:1; rSTs:1)
- Murimonas (isolates:5; rSTs:2)
- Murimonas intestini (isolates:5; rSTs:2)
- Niameybacter (isolates:1; rSTs:2)
- Niameybacter massiliensis (isolates:1; rSTs:2)
- Novisyntrophococcus (isolates:1; rSTs:1)
- Novisyntrophococcus fermenticellae (isolates:1; rSTs:1)
- Ohessyouella (isolates:2; rSTs:1)
- Ohessyouella blattaphilus (isolates:2; rSTs:1)
- Oliverpabstia (isolates:3; rSTs:3)
- Oribacterium (isolates:6; rSTs:7)
- Otoolea (isolates:1; rSTs:1)
- Otoolea muris (isolates:1; rSTs:1)
- Parablautia (isolates:2; rSTs:2)
- Parasporobacterium (isolates:1; rSTs:1)
- Parasporobacterium paucivorans (isolates:1; rSTs:1)
- Petralouisia (isolates:1; rSTs:1)
- Petralouisia muris (isolates:1; rSTs:1)
- Porcincola (isolates:1; rSTs:1)
- Porcincola intestinalis (isolates:1; rSTs:1)
- Pseudobutyrivibrio (isolates:18; rSTs:20)
- Qiania (isolates:1; rSTs:1)
- Qiania dongpingensis (isolates:1; rSTs:1)
- Robinsoniella (isolates:6; rSTs:5)
- Roseburia (isolates:77; rSTs:64)
- Roseburia amylophila (isolates:2; rSTs:2)
- Roseburia faecis (isolates:13; rSTs:12)
- Roseburia hominis (isolates:8; rSTs:6)
- Roseburia intestinalis (isolates:19; rSTs:14)
- Roseburia inulinivorans (isolates:14; rSTs:12)
- Roseburia lenta (isolates:1; rSTs:1)
- Roseburia porci (isolates:1; rSTs:1)
- Roseburia rectibacter (isolates:1; rSTs:1)
- Roseburia sp. (isolates:16; rSTs:13)
- Roseburia yibonii (isolates:1; rSTs:1)
- Roseburia zhanii (isolates:1; rSTs:1)
- Schaedlerella (isolates:2; rSTs:3)
- Schaedlerella arabinosiphila (isolates:2; rSTs:3)
- Sellimonas (isolates:19; rSTs:10)
- Shuttleworthia (isolates:2; rSTs:2)
- Simiaoa (isolates:1; rSTs:1)
- Simiaoa sunii (isolates:1; rSTs:1)
- Sporanaerobium (isolates:1; rSTs:1)
- Sporanaerobium hydrogeniformans (isolates:1; rSTs:1)
- Sporofaciens (isolates:1; rSTs:1)
- Sporofaciens musculi (isolates:1; rSTs:1)
- Stomatobaculum (isolates:3; rSTs:2)
- Suilimivivens (isolates:1; rSTs:1)
- Suilimivivens aceti (isolates:1; rSTs:1)
- Suipraeoptans (isolates:1; rSTs:1)
- Suipraeoptans intestinalis (isolates:1; rSTs:1)
- Tyzzerella (isolates:9; rSTs:7)
- Variimorphobacter (isolates:1; rSTs:1)
- Variimorphobacter saccharofermentans (isolates:1; rSTs:1)
- Velocimicrobium (isolates:1; rSTs:1)
- Velocimicrobium porci (isolates:1; rSTs:1)
- Waltera (isolates:1; rSTs:1)
- Waltera intestinalis (isolates:1; rSTs:1)
- Wansuia (isolates:1; rSTs:1)
- Wansuia hejianensis (isolates:1; rSTs:1)
- Wujia (isolates:1; rSTs:1)
- Wujia chipingensis (isolates:1; rSTs:1)
- Zhenhengia (isolates:1; rSTs:1)
- Zhenhengia yiwuensis (isolates:1; rSTs:1)
- Vallitaleaceae (isolates:7; rSTs:7)
- Lutisporales (isolates:2; rSTs:2)
- Monoglobales (isolates:2; rSTs:2)
- Moorellales (isolates:33; rSTs:26 tree)
- Natranaerobiales (isolates:4; rSTs:3)
- Peptostreptococcales (isolates:19959; rSTs:1487)
- Acidaminobacteraceae (isolates:1; rSTs:1)
- Anaerovoracaceae (isolates:26; rSTs:19)
- Alterileibacterium (isolates:1; rSTs:1)
- Alterileibacterium massiliense (isolates:1; rSTs:1)
- Aminicella (isolates:1; rSTs:1)
- Aminicella lysinilytica (isolates:1; rSTs:1)
- Aminipila (isolates:3; rSTs:3)
- Anaerovorax (isolates:1; rSTs:1)
- Anaerovorax odorimutans (isolates:1; rSTs:1)
- Bacilliculturomica (isolates:1; rSTs:1)
- Bacilliculturomica massiliensis (isolates:1; rSTs:1)
- Emergencia (isolates:7; rSTs:3)
- Emergencia timonensis (isolates:7; rSTs:3)
- Mobilibacterium (isolates:1; rSTs:1)
- Mobilibacterium timonense (isolates:1; rSTs:1)
- Mogibacterium (isolates:11; rSTs:8)
- Alterileibacterium (isolates:1; rSTs:1)
- Caminicellaceae (isolates:5; rSTs:4)
- Filifactoraceae (isolates:13; rSTs:12)
- Acetoanaerobium (isolates:3; rSTs:3)
- Criibacterium (isolates:2; rSTs:2)
- Criibacterium bergeronii (isolates:2; rSTs:2)
- Filifactor (isolates:1; rSTs:1)
- Filifactor alocis (isolates:1; rSTs:1)
- Peptoanaerobacter (isolates:6; rSTs:5)
- Proteocatella (isolates:1; rSTs:1)
- Proteocatella sphenisci (isolates:1; rSTs:1)
- Natronincolaceae (isolates:15; rSTs:14)
- Alkaliphilus (isolates:10; rSTs:10)
- Alkaliphilus flagellatus (isolates:1; rSTs:1)
- Alkaliphilus halophilus (isolates:1; rSTs:1)
- Alkaliphilus hydrothermalis (isolates:1; rSTs:1)
- Alkaliphilus metalliredigens (isolates:1; rSTs:1)
- Alkaliphilus oremlandii (isolates:1; rSTs:1)
- Alkaliphilus peptidifermentans (isolates:1; rSTs:1)
- Alkaliphilus pronyensis (isolates:1; rSTs:1)
- Alkaliphilus serpentinus (isolates:1; rSTs:1)
- Alkaliphilus sp. (isolates:1; rSTs:1)
- Alkaliphilus transvaalensis (isolates:1; rSTs:1)
- Anaerovirgula (isolates:1; rSTs:1)
- Anaerovirgula multivorans (isolates:1; rSTs:1)
- Natronincola (isolates:2; rSTs:2)
- Serpentinicella (isolates:2; rSTs:1)
- Serpentinicella alkaliphila (isolates:2; rSTs:1)
- Alkaliphilus (isolates:10; rSTs:10)
- Peptoclostridiaceae (isolates:3; rSTs:2)
- Peptostreptococcaceae (isolates:19884; rSTs:1426)
- Asaccharospora (isolates:1; rSTs:1)
- Asaccharospora irregularis (isolates:1; rSTs:1)
- Clostridioides (isolates:19676; rSTs:1288)
- Faecalimicrobium (isolates:2)
- Faecalimicrobium dakarense (isolates:2)
- Intestinibacter (isolates:17; rSTs:12)
- Intestinibacter bartlettii (isolates:17; rSTs:12)
- Mediannikoviicoccus (isolates:1; rSTs:1)
- Mediannikoviicoccus vaginalis (isolates:1; rSTs:1)
- Metaclostridioides (isolates:5)
- Metaclostridioides mangenotii (isolates:5)
- Paeniclostridium (isolates:2; rSTs:45)
- Paraclostridium (isolates:86; rSTs:26)
- Peptacetobacter (isolates:4; rSTs:4)
- Peptostreptococcus (isolates:40; rSTs:17)
- Peptostreptococcus anaerobius (isolates:29; rSTs:9)
- Peptostreptococcus canis (isolates:2; rSTs:1)
- Peptostreptococcus faecalis (isolates:1; rSTs:1)
- Peptostreptococcus porci (isolates:1; rSTs:1)
- Peptostreptococcus russellii (isolates:3; rSTs:2)
- Peptostreptococcus sp. (isolates:3; rSTs:2)
- Peptostreptococcus stomatis (isolates:1; rSTs:1)
- Romboutsia (isolates:34; rSTs:21)
- Romboutsia faecis (isolates:1; rSTs:1)
- Romboutsia hominis (isolates:4; rSTs:3)
- Romboutsia ilealis (isolates:1; rSTs:1)
- Romboutsia lituseburensis (isolates:4; rSTs:3)
- Romboutsia maritimum (isolates:1; rSTs:1)
- Romboutsia sedimentorum (isolates:2; rSTs:2)
- Romboutsia sp. (isolates:19; rSTs:8)
- Romboutsia timonensis (isolates:1; rSTs:1)
- Romboutsia weinsteinii (isolates:1; rSTs:1)
- Tepidibacter (isolates:5; rSTs:4)
- Terrisporobacter (isolates:11; rSTs:7)
- Asaccharospora (isolates:1; rSTs:1)
- Tepidibacteraceae (isolates:3)
- Thermotaleaceae (isolates:7; rSTs:7)
- Anaeromicrobium (isolates:1; rSTs:1)
- Anaeromicrobium sediminis (isolates:1; rSTs:1)
- Anaerosolibacter (isolates:1; rSTs:1)
- Anaerosolibacter carboniphilus (isolates:1; rSTs:1)
- Geosporobacter (isolates:2; rSTs:2)
- Inediibacterium (isolates:1; rSTs:1)
- Inediibacterium massiliense (isolates:1; rSTs:1)
- Marinisporobacter (isolates:1; rSTs:1)
- Marinisporobacter balticus (isolates:1; rSTs:1)
- Thermotalea (isolates:1; rSTs:1)
- Thermotalea metallivorans (isolates:1; rSTs:1)
- Anaeromicrobium (isolates:1; rSTs:1)
- Tindalliaceae (isolates:2; rSTs:2)
- Thermoanaerobacterales (isolates:65; rSTs:55 tree)
- Thermoanaerobacteraceae (isolates:63; rSTs:53 tree)
- Aceticella (isolates:1; rSTs:1)
- Aceticella autotrophica (isolates:1; rSTs:1)
- Ammonifex (isolates:2; rSTs:2)
- Caldanaerobacter (isolates:6; rSTs:4 tree)
- Caldanaerobius (isolates:2; rSTs:2)
- Calorimonas (isolates:1; rSTs:1)
- Calorimonas adulescens (isolates:1; rSTs:1)
- Carboxydothermus (isolates:5; rSTs:4 tree)
- Desulfovirgula (isolates:1; rSTs:1)
- Desulfovirgula thermocuniculi (isolates:1; rSTs:1)
- Gelria (isolates:1; rSTs:1)
- Gelria sp. (isolates:1; rSTs:1)
- Thermacetogenium (isolates:3; rSTs:1)
- Thermacetogenium phaeum (isolates:3; rSTs:1)
- Thermoanaerobacter (isolates:22; rSTs:18 tree)
- Thermoanaerobacter brockii (isolates:1; rSTs:1)
- Thermoanaerobacter ethanolicus (isolates:1; rSTs:1)
- Thermoanaerobacter indiensis (isolates:1; rSTs:1)
- Thermoanaerobacter italicus (isolates:1; rSTs:1)
- Thermoanaerobacter kivui (isolates:1; rSTs:1)
- Thermoanaerobacter mathranii (isolates:1; rSTs:1)
- Thermoanaerobacter siderophilus (isolates:3; rSTs:1)
- Thermoanaerobacter sp. (isolates:7; rSTs:7 tree)
- Thermoanaerobacter thermocopriae (isolates:2; rSTs:1)
- Thermoanaerobacter thermohydrosulfuricus (isolates:1; rSTs:1)
- Thermoanaerobacter uzonensis (isolates:1; rSTs:1)
- Thermoanaerobacter wiegelii (isolates:2; rSTs:1)
- Thermoanaerobacterium (isolates:18; rSTs:17 tree)
- Thermodesulfitimonas (isolates:1; rSTs:1)
- Thermodesulfitimonas autotrophica (isolates:1; rSTs:1)
- Aceticella (isolates:1; rSTs:1)
- Thermoanaerobacterales Family III. Incertae Sedis (isolates:1; rSTs:1 tree)
- Thermoanaerobacterales Family IV. Incertae Sedis (isolates:1; rSTs:1)
- Thermoanaerobacteraceae (isolates:63; rSTs:53 tree)
- Thermosediminibacterales (isolates:12; rSTs:10 tree)
- Tepidanaerobacteraceae (isolates:6; rSTs:5 tree)
- Thermosediminibacteraceae (isolates:6; rSTs:5 tree)
- Caldicellulosiruptorales (isolates:48; rSTs:16 tree)
- Culicoidibacteria (isolates:1; rSTs:1)
- Desulfuribacillia (isolates:2; rSTs:2)
- Dethiobacteria (isolates:3; rSTs:2)
- Erysipelotrichia (isolates:1114; rSTs:482 tree)
- Erysipelotrichales (isolates:1114; rSTs:482 tree)
- Coprobacillaceae (isolates:407; rSTs:216 tree)
- Catenibacterium (isolates:37; rSTs:18 tree)
- Coprobacillus (isolates:9; rSTs:5 tree)
- Eggerthia (isolates:4; rSTs:3 tree)
- Faecalibacillus (isolates:43; rSTs:31 tree)
- Kandleria (isolates:8; rSTs:7 tree)
- Longibaculum (isolates:6; rSTs:5 tree)
- Sharpea (isolates:5; rSTs:5 tree)
- Tannockella (isolates:1; rSTs:1)
- Tannockella kyphosi (isolates:1; rSTs:1)
- Thomasclavelia (isolates:294; rSTs:141 tree)
- Erysipelatoclostridium sp. (isolates:2; rSTs:2 tree)
- Thomasclavelia cocleata (isolates:5; rSTs:2)
- Thomasclavelia ramosa (isolates:106; rSTs:37 tree)
- Thomasclavelia saccharogumia (isolates:3; rSTs:2)
- Thomasclavelia spiroformis (isolates:8; rSTs:5 tree)
- [Clostridium] innocuum (isolates:170; rSTs:93 tree)
- Erysipelotrichaceae (isolates:449; rSTs:222 tree)
- Absicoccus (isolates:2; rSTs:2)
- Absiella (isolates:5; rSTs:4 tree)
- Allobaculum (isolates:4; rSTs:3 tree)
- Allocoprobacillus (isolates:1; rSTs:1)
- Allocoprobacillus halotolerans (isolates:1; rSTs:1)
- Amedibacillus (isolates:5; rSTs:4 tree)
- Amedibacterium (isolates:5; rSTs:4 tree)
- Anaerolactibacter (isolates:1; rSTs:1)
- Anaerolactibacter massiliensis (isolates:1; rSTs:1)
- Anaerorhabdus (isolates:1; rSTs:1)
- Anaerorhabdus furcosa (isolates:1; rSTs:1)
- Beduini (isolates:2; rSTs:1)
- Beduini massiliensis (isolates:2; rSTs:1)
- Breznakia (isolates:14; rSTs:6 tree)
- Bulleidia (isolates:4; rSTs:3 tree)
- Candidatus Stoquefichus (isolates:3; rSTs:2)
- Catenisphaera (isolates:1; rSTs:1)
- Catenisphaera adipataccumulans (isolates:1; rSTs:1)
- Copranaerobaculum (isolates:1; rSTs:1)
- Copranaerobaculum intestinale (isolates:1; rSTs:1)
- Dielma (isolates:5; rSTs:3 tree)
- Dubosiella (isolates:2; rSTs:1)
- Erysipelothrix (isolates:239; rSTs:110 tree)
- Erysipelothrix amsterdamensis (isolates:2)
- Erysipelothrix anatis (isolates:4; rSTs:4 tree)
- Erysipelothrix aquatica (isolates:3; rSTs:2)
- Erysipelothrix enhydrae (isolates:1)
- Erysipelothrix inopinata (isolates:1; rSTs:1)
- Erysipelothrix larvae (isolates:1; rSTs:1)
- Erysipelothrix piscisicarius (isolates:2; rSTs:1)
- Erysipelothrix rhusiopathiae (isolates:220; rSTs:91 tree)
- Erysipelothrix sp. (isolates:3; rSTs:8 tree)
- Erysipelothrix tonsillarum (isolates:1; rSTs:1)
- Erysipelothrix urinaevulpis (isolates:1; rSTs:1)
- Faecalibaculum (isolates:4; rSTs:4 tree)
- Faecalicoccus (isolates:20; rSTs:7 tree)
- Faecalitalea (isolates:20; rSTs:6 tree)
- Floccifex (isolates:1; rSTs:1)
- Floccifex porci (isolates:1; rSTs:1)
- Galactobacillus (isolates:1; rSTs:1)
- Galactobacillus timonensis (isolates:1; rSTs:1)
- Holdemanella (isolates:32; rSTs:13 tree)
- Holdemania (isolates:16; rSTs:10 tree)
- Ileibacterium (isolates:1; rSTs:1)
- Ileibacterium valens (isolates:1; rSTs:1)
- Intestinibaculum (isolates:1; rSTs:1)
- Intestinibaculum porci (isolates:1; rSTs:1)
- Lactimicrobium (isolates:1)
- Lactimicrobium massiliense (isolates:1)
- Longicatena (isolates:33; rSTs:10 tree)
- Massilicoli (isolates:2; rSTs:2)
- Massilicoli timonensis (isolates:2; rSTs:2)
- Massilimicrobiota (isolates:10; rSTs:9 tree)
- Merdibacter (isolates:1; rSTs:1)
- Merdibacter massiliensis (isolates:1; rSTs:1)
- Solobacterium (isolates:9; rSTs:6 tree)
- Stecheria (isolates:1; rSTs:1)
- Stecheria intestinalis (isolates:1; rSTs:1)
- Traorella (isolates:1; rSTs:1)
- Traorella massiliensis (isolates:1; rSTs:1)
- Turicibacteraceae (isolates:258; rSTs:44 tree)
- Coprobacillaceae (isolates:407; rSTs:216 tree)
- Erysipelotrichales (isolates:1114; rSTs:482 tree)
- Limnochordia (isolates:1; rSTs:1)
- Negativicutes (isolates:460; rSTs:347 tree)
- Acidaminococcales (isolates:72; rSTs:42 tree)
- Acidaminococcaceae (isolates:72; rSTs:42 tree)
- Acidaminococcus (isolates:33; rSTs:23 tree)
- Acidaminococcus fermentans (isolates:8; rSTs:6 tree)
- Acidaminococcus hominis (isolates:1; rSTs:1)
- Acidaminococcus intestini (isolates:13; rSTs:7 tree)
- Acidaminococcus massiliensis (isolates:3; rSTs:2)
- Acidaminococcus provencensis (isolates:2; rSTs:2)
- Acidaminococcus sp. (isolates:5; rSTs:4 tree)
- Acidaminococcus timonensis (isolates:1; rSTs:1)
- Phascolarctobacterium (isolates:36; rSTs:16 tree)
- Succiniclasticum (isolates:2; rSTs:2)
- Succiniclasticum ruminis (isolates:2; rSTs:2)
- Succinispira (isolates:1; rSTs:1)
- Succinispira mobilis (isolates:1; rSTs:1)
- Acidaminococcus (isolates:33; rSTs:23 tree)
- Acidaminococcaceae (isolates:72; rSTs:42 tree)
- Selenomonadales (isolates:162; rSTs:129 tree)
- Selenomonadaceae (isolates:123; rSTs:100 tree)
- Anaerovibrio (isolates:6; rSTs:5 tree)
- Centipeda (isolates:1; rSTs:1)
- Centipeda periodontii (isolates:1; rSTs:1)
- Megamonas (isolates:32; rSTs:24 tree)
- Mitsuokella (isolates:18; rSTs:14 tree)
- Pectinatus (isolates:16; rSTs:13 tree)
- Propionispira (isolates:2; rSTs:2)
- Schwartzia (isolates:1; rSTs:1)
- Schwartzia succinivorans (isolates:1; rSTs:1)
- Selenobaculum (isolates:1; rSTs:1)
- Selenobaculum gbiensis (isolates:1; rSTs:1)
- Selenomonas (isolates:46; rSTs:39 tree)
- Selenomonas artemidis (isolates:2; rSTs:2)
- Selenomonas bovis (isolates:4; rSTs:3 tree)
- Selenomonas dianae (isolates:1; rSTs:1)
- Selenomonas felix (isolates:1; rSTs:1)
- Selenomonas flueggei (isolates:1; rSTs:1)
- Selenomonas infelix (isolates:1; rSTs:1)
- Selenomonas massiliensis (isolates:1; rSTs:1)
- Selenomonas montiformis (isolates:1; rSTs:1)
- Selenomonas noxia (isolates:2; rSTs:2)
- Selenomonas ruminantium (isolates:8; rSTs:8 tree)
- Selenomonas ruminis (isolates:1)
- Selenomonas sp. (isolates:15; rSTs:14 tree)
- Selenomonas sputigena (isolates:7; rSTs:3 tree)
- Selenomonas timonae (isolates:1; rSTs:1)
- Sporomusaceae (isolates:39; rSTs:29 tree)
- Acetonema (isolates:1; rSTs:1)
- Acetonema longum (isolates:1; rSTs:1)
- Anaeroarcus (isolates:1; rSTs:1)
- Anaeroarcus burkinensis (isolates:1; rSTs:1)
- Anaeromusa (isolates:1; rSTs:1)
- Anaeromusa acidaminophila (isolates:1; rSTs:1)
- Anaerospora (isolates:1; rSTs:1)
- Anaerospora hongkongensis (isolates:1; rSTs:1)
- Anaerosporomusa (isolates:1; rSTs:1)
- Anaerosporomusa subterranea (isolates:1; rSTs:1)
- Dendrosporobacter (isolates:2; rSTs:1)
- Dendrosporobacter quercicolus (isolates:2; rSTs:1)
- Methylomusa (isolates:1; rSTs:1)
- Methylomusa anaerophila (isolates:1; rSTs:1)
- Pelorhabdus (isolates:1; rSTs:1)
- Pelorhabdus rhamnosifermentans (isolates:1; rSTs:1)
- Pelosinus (isolates:12; rSTs:7 tree)
- Propionispora (isolates:3; rSTs:3 tree)
- Sporolituus (isolates:1; rSTs:1)
- Sporolituus thermophilus (isolates:1; rSTs:1)
- Sporomusa (isolates:13; rSTs:9 tree)
- Thermosinus (isolates:1; rSTs:1)
- Thermosinus carboxydivorans (isolates:1; rSTs:1)
- Acetonema (isolates:1; rSTs:1)
- Selenomonadaceae (isolates:123; rSTs:100 tree)
- Veillonellales (isolates:226; rSTs:176 tree)
- Veillonellaceae (isolates:226; rSTs:176 tree)
- Allisonella (isolates:4; rSTs:3)
- Allisonella histaminiformans (isolates:4; rSTs:3)
- Anaeroglobus (isolates:1; rSTs:1)
- Anaeroglobus geminatus (isolates:1; rSTs:1)
- Colibacter (isolates:2; rSTs:1)
- Colibacter massiliensis (isolates:2; rSTs:1)
- Dialister (isolates:17; rSTs:13 tree)
- Lucifera (isolates:1; rSTs:1)
- Lucifera butyrica (isolates:1; rSTs:1)
- Massilibacillus (isolates:1; rSTs:1)
- Massilibacillus massiliensis (isolates:1; rSTs:1)
- Megasphaera (isolates:65; rSTs:45 tree)
- Megasphaera butyrica (isolates:1; rSTs:1)
- Megasphaera cerevisiae (isolates:3; rSTs:2)
- Megasphaera elsdenii (isolates:19; rSTs:13 tree)
- Megasphaera genomosp. type_1 (isolates:1; rSTs:1)
- Megasphaera genomosp. type_2 (isolates:1; rSTs:1)
- Megasphaera hexanoica (isolates:2; rSTs:2)
- Megasphaera hominis (isolates:1; rSTs:1)
- Megasphaera hutchinsoni (isolates:1; rSTs:1)
- Megasphaera lornae (isolates:1; rSTs:1)
- Megasphaera massiliensis (isolates:14; rSTs:5 tree)
- Megasphaera micronuciformis (isolates:2; rSTs:2)
- Megasphaera paucivorans (isolates:1; rSTs:1)
- Megasphaera sp. (isolates:14; rSTs:10 tree)
- Megasphaera stantonii (isolates:2; rSTs:2)
- Megasphaera vaginalis (isolates:2; rSTs:2)
- Negativicoccus (isolates:2; rSTs:2)
- Veillonella (isolates:133; rSTs:109 tree)
- Veillonella agrestimuris (isolates:1; rSTs:1)
- Veillonella atypica (isolates:25; rSTs:20 tree)
- Veillonella caviae (isolates:1; rSTs:1)
- Veillonella criceti (isolates:1; rSTs:1)
- Veillonella denticariosi (isolates:2; rSTs:2)
- Veillonella dispar (isolates:2; rSTs:1)
- Veillonella faecalis (isolates:1)
- Veillonella fallax (isolates:1; rSTs:1)
- Veillonella hominis (isolates:1; rSTs:1)
- Veillonella infantium (isolates:1; rSTs:1)
- Veillonella intestinalis (isolates:2; rSTs:2)
- Veillonella magna (isolates:3; rSTs:2)
- Veillonella montpellierensis (isolates:3; rSTs:2)
- Veillonella nakazawae (isolates:3; rSTs:3 tree)
- Veillonella parvula (isolates:35; rSTs:25 tree)
- Veillonella ratti (isolates:8; rSTs:2)
- Veillonella rodentium (isolates:1; rSTs:1)
- Veillonella rogosae (isolates:4; rSTs:3 tree)
- Veillonella seminalis (isolates:4; rSTs:2)
- Veillonella sp. (isolates:30; rSTs:34 tree)
- Veillonella tobetsuensis (isolates:4; rSTs:4 tree)
- Allisonella (isolates:4; rSTs:3)
- Veillonellaceae (isolates:226; rSTs:176 tree)
- Acidaminococcales (isolates:72; rSTs:42 tree)
- Tissierellia (isolates:271; rSTs:220 tree)
- Tissierellales (isolates:259; rSTs:208 tree)
- Acidilutibacteraceae (isolates:1; rSTs:1)
- Gottschalkiaceae (isolates:3; rSTs:3 tree)
- Peptoniphilaceae (isolates:213; rSTs:166 tree)
- Aedoeadaptatus (isolates:4; rSTs:1)
- Anaerococcus (isolates:51; rSTs:46 tree)
- Anaerococcus degeneri (isolates:2; rSTs:1)
- Anaerococcus faecalis (isolates:1; rSTs:1)
- Anaerococcus hydrogenalis (isolates:7; rSTs:4 tree)
- Anaerococcus ihuae (isolates:1; rSTs:1)
- Anaerococcus jeddahensis (isolates:1; rSTs:1)
- Anaerococcus lactolyticus (isolates:3; rSTs:2)
- Anaerococcus marasmi (isolates:1; rSTs:1)
- Anaerococcus mediterraneensis (isolates:1; rSTs:1)
- Anaerococcus murdochii (isolates:1; rSTs:1)
- Anaerococcus nagyae (isolates:2; rSTs:2)
- Anaerococcus obesiensis (isolates:2; rSTs:1)
- Anaerococcus octavius (isolates:2; rSTs:2)
- Anaerococcus porci (isolates:1; rSTs:1)
- Anaerococcus prevotii (isolates:2; rSTs:1)
- Anaerococcus provencensis (isolates:1; rSTs:1)
- Anaerococcus rubeinfantis (isolates:2; rSTs:1)
- Anaerococcus senegalensis (isolates:2; rSTs:2)
- Anaerococcus sp. (isolates:12; rSTs:16 tree)
- Anaerococcus tetradius (isolates:2; rSTs:2)
- Anaerococcus urinomassiliensis (isolates:1; rSTs:1)
- Anaerococcus vaginalis (isolates:3; rSTs:2)
- Anaerococcus vaginimassiliensis (isolates:1; rSTs:1)
- Anaerosphaera (isolates:3; rSTs:3 tree)
- Finegoldia (isolates:33; rSTs:26 tree)
- Helcococcus (isolates:11; rSTs:8 tree)
- Khoudiadiopia (isolates:1; rSTs:1)
- Khoudiadiopia massiliensis (isolates:1; rSTs:1)
- Lagierella (isolates:2; rSTs:1)
- Lagierella massiliensis (isolates:2; rSTs:1)
- Miniphocaeibacter (isolates:2; rSTs:2)
- Murdochiella (isolates:5; rSTs:3 tree)
- Parvimonas (isolates:41; rSTs:25 tree)
- Peptoniphilus (isolates:57; rSTs:47 tree)
- Peptoniphilus asaccharolyticus (isolates:2; rSTs:1)
- Peptoniphilus catoniae (isolates:1; rSTs:1)
- Peptoniphilus coxii (isolates:2; rSTs:2)
- Peptoniphilus duerdenii (isolates:2; rSTs:2)
- Peptoniphilus faecalis (isolates:2; rSTs:1)
- Peptoniphilus gorbachii (isolates:2; rSTs:2)
- Peptoniphilus grossensis (isolates:3; rSTs:1)
- Peptoniphilus harei (isolates:4; rSTs:2)
- Peptoniphilus indolicus (isolates:2; rSTs:1)
- Peptoniphilus ivorii (isolates:2; rSTs:2)
- Peptoniphilus koenoeneniae (isolates:1; rSTs:1)
- Peptoniphilus lacrimalis (isolates:7; rSTs:5 tree)
- Peptoniphilus lacydonensis (isolates:1; rSTs:1)
- Peptoniphilus mikwangii (isolates:1; rSTs:1)
- Peptoniphilus nemausensis (isolates:1; rSTs:1)
- Peptoniphilus obesi (isolates:2; rSTs:1)
- Peptoniphilus ovalis (isolates:1; rSTs:1)
- Peptoniphilus phoceensis (isolates:2; rSTs:1)
- Peptoniphilus rachelemmaiella (isolates:1; rSTs:1)
- Peptoniphilus raoultii (isolates:1; rSTs:1)
- Peptoniphilus rhinitidis (isolates:1; rSTs:1)
- Peptoniphilus senegalensis (isolates:2; rSTs:1)
- Peptoniphilus sp. (isolates:10; rSTs:12 tree)
- Peptoniphilus stercorisuis (isolates:1; rSTs:1)
- Peptoniphilus timonensis (isolates:1; rSTs:1)
- Peptoniphilus tyrrelliae (isolates:1; rSTs:1)
- Peptoniphilus vaginalis (isolates:1; rSTs:1)
- Urinicoccus (isolates:3; rSTs:3 tree)
- Sporanaerobacteraceae (isolates:10; rSTs:8 tree)
- Tepidimicrobiaceae (isolates:7; rSTs:6 tree)
- Thermohalobacteraceae (isolates:9; rSTs:9 tree)
- Caldisalinibacter (isolates:1; rSTs:1)
- Caldisalinibacter kiritimatiensis (isolates:1; rSTs:1)
- Caloranaerobacter (isolates:5; rSTs:5 tree)
- Clostridiisalibacter (isolates:1; rSTs:1)
- Clostridiisalibacter paucivorans (isolates:1; rSTs:1)
- Sporosalibacterium (isolates:1; rSTs:1)
- Sporosalibacterium faouarense (isolates:1; rSTs:1)
- Thermohalobacter (isolates:1; rSTs:1)
- Thermohalobacter berrensis (isolates:1; rSTs:1)
- Caldisalinibacter (isolates:1; rSTs:1)
- Tissierellaceae (isolates:16; rSTs:15 tree)
- Gudongella (isolates:1; rSTs:1)
- Gudongella oleilytica (isolates:1; rSTs:1)
- Paratissierella (isolates:1; rSTs:1)
- Paratissierella segnis (isolates:1; rSTs:1)
- Soehngenia (isolates:1; rSTs:1)
- Soehngenia longivitae (isolates:1; rSTs:1)
- Tissierella (isolates:12; rSTs:11 tree)
- Urmitella (isolates:1; rSTs:1)
- Urmitella timonensis (isolates:1; rSTs:1)
- Gudongella (isolates:1; rSTs:1)
- Tissierellales (isolates:259; rSTs:208 tree)
- Bacilli (isolates:289418; rSTs:79529)
- Bacteroidota (isolates:11296; rSTs:6447)
- Bacteroidia (isolates:5904; rSTs:2734)
- Bacteroidales (isolates:5815; rSTs:2659)
- Bacteroidaceae (isolates:3860; rSTs:1541)
- Bacteroides (isolates:2989; rSTs:1189 tree)
- Bacteroides acidifaciens (isolates:39; rSTs:12 tree)
- Bacteroides bouchesdurhonensis (isolates:3; rSTs:3 tree)
- Bacteroides caccae (isolates:97; rSTs:49 tree)
- Bacteroides caecicola (isolates:2; rSTs:2)
- Bacteroides caecigallinarum (isolates:8; rSTs:7 tree)
- Bacteroides caecimuri (isolates:1; rSTs:1)
- Bacteroides caecimuris (isolates:5; rSTs:2)
- Bacteroides cellulosilyticus (isolates:46; rSTs:34 tree)
- Bacteroides clarus (isolates:14; rSTs:11 tree)
- Bacteroides congonensis (isolates:3; rSTs:3 tree)
- Bacteroides coprosuis (isolates:1; rSTs:1)
- Bacteroides cutis (isolates:2; rSTs:2)
- Bacteroides eggerthii (isolates:51; rSTs:21 tree)
- Bacteroides faecalis (isolates:1)
- Bacteroides faecichinchillae (isolates:3; rSTs:2)
- Bacteroides faecis (isolates:61; rSTs:24 tree)
- Bacteroides faecium (isolates:1; rSTs:1)
- Bacteroides finegoldii (isolates:24; rSTs:10 tree)
- Bacteroides fluxus (isolates:2; rSTs:1)
- Bacteroides fragilis (isolates:737; rSTs:288 tree)
- Bacteroides gallinaceum (isolates:6; rSTs:6 tree)
- Bacteroides gallinarum (isolates:1; rSTs:1)
- Bacteroides graminisolvens (isolates:1; rSTs:1)
- Bacteroides helcogenes (isolates:1; rSTs:1)
- Bacteroides heparinolyticus (isolates:4; rSTs:4 tree)
- Bacteroides hominis (ex Afrizal et al. 2022) (isolates:1; rSTs:1)
- Bacteroides hominis (ex Liu et al. 2022) (isolates:8; rSTs:6 tree)
- Bacteroides humanifaecis (isolates:2; rSTs:2)
- Bacteroides ihuae (isolates:1; rSTs:1)
- Bacteroides ilei (isolates:1; rSTs:1)
- Bacteroides intestinalis (isolates:38; rSTs:22 tree)
- Bacteroides luhongzhouii (isolates:2; rSTs:1)
- Bacteroides luti (isolates:1; rSTs:1)
- Bacteroides mediterraneensis (isolates:4; rSTs:4 tree)
- Bacteroides muris (isolates:2; rSTs:2)
- Bacteroides muris (ex Afrizal et al. 2022) (isolates:1; rSTs:1)
- Bacteroides ndongoniae (isolates:1; rSTs:1)
- Bacteroides neonati (isolates:2; rSTs:1)
- Bacteroides nordii (isolates:18; rSTs:14 tree)
- Bacteroides oleiciplenus (isolates:3; rSTs:2)
- Bacteroides ovatus (isolates:456; rSTs:111 tree)
- Bacteroides propionicifaciens (isolates:1; rSTs:1)
- Bacteroides propionicigenes (isolates:1; rSTs:1)
- Bacteroides pyogenes (isolates:26; rSTs:11 tree)
- Bacteroides reticulotermitis (isolates:2; rSTs:2)
- Bacteroides rodentium (isolates:1; rSTs:1)
- Bacteroides salyersiae (isolates:58; rSTs:16 tree)
- Bacteroides sp. (isolates:111; rSTs:86 tree)
- Bacteroides stercorirosoris (isolates:4; rSTs:2)
- Bacteroides stercoris (isolates:92; rSTs:47 tree)
- Bacteroides thetaiotaomicron (isolates:521; rSTs:162 tree)
- Bacteroides timonensis (isolates:1; rSTs:1)
- Bacteroides togonis (isolates:1; rSTs:1)
- Bacteroides uniformis (isolates:329; rSTs:126 tree)
- Bacteroides xylanisolvens (isolates:176; rSTs:66 tree)
- Bacteroides zhangwenhongii (isolates:3; rSTs:3 tree)
- Bacteroides zoogleoformans (isolates:2; rSTs:1)
- Candidatus Bacteroides intestinigallinarum (isolates:5; rSTs:4 tree)
- Caecibacteroides (isolates:3; rSTs:2)
- Caecibacteroides pullorum (isolates:3; rSTs:2)
- Jilunia (isolates:1; rSTs:1)
- Jilunia laotingensis (isolates:1; rSTs:1)
- Mediterranea (isolates:3; rSTs:3 tree)
- Phocaeicola (isolates:864; rSTs:346 tree)
- Phocaeicola abscessus (isolates:1; rSTs:1)
- Phocaeicola acetigenes (isolates:1)
- Phocaeicola barnesiae (isolates:10; rSTs:8 tree)
- Phocaeicola coprocola (isolates:16; rSTs:9 tree)
- Phocaeicola coprophilus (isolates:8; rSTs:3 tree)
- Phocaeicola dorei (isolates:112; rSTs:48 tree)
- Phocaeicola faecalis (isolates:1; rSTs:1)
- Phocaeicola faecicola (isolates:1; rSTs:1)
- Phocaeicola massiliensis (isolates:27; rSTs:20 tree)
- Phocaeicola oris (isolates:1; rSTs:1)
- Phocaeicola paurosaccharolyticus (isolates:1; rSTs:1)
- Phocaeicola plebeius (isolates:35; rSTs:26 tree)
- Phocaeicola salanitronis (isolates:1; rSTs:1)
- Phocaeicola sartorii (isolates:7; rSTs:6 tree)
- Phocaeicola sp. (isolates:1; rSTs:1)
- Phocaeicola vulgatus (isolates:641; rSTs:219 tree)
- Bacteroides (isolates:2989; rSTs:1189 tree)
- Balneicellaceae (isolates:1; rSTs:1)
- Barnesiellaceae (isolates:35; rSTs:28 tree)
- Dysgonomonadaceae (isolates:38; rSTs:36 tree)
- Dysgonomonas (isolates:31; rSTs:29 tree)
- Dysgonomonas alginatilytica (isolates:1; rSTs:1)
- Dysgonomonas capnocytophagoides (isolates:2; rSTs:2)
- Dysgonomonas gadei (isolates:2; rSTs:1)
- Dysgonomonas hofstadii (isolates:2; rSTs:2)
- Dysgonomonas macrotermitis (isolates:2; rSTs:1)
- Dysgonomonas massiliensis (isolates:1; rSTs:1)
- Dysgonomonas mossii (isolates:6; rSTs:3 tree)
- Dysgonomonas sp. (isolates:15; rSTs:18 tree)
- Petrimonas (isolates:1; rSTs:1)
- Petrimonas mucosa (isolates:1; rSTs:1)
- Proteiniphilum (isolates:4; rSTs:4 tree)
- Seramator (isolates:2; rSTs:2)
- Seramator thermalis (isolates:2; rSTs:2)
- Dysgonomonas (isolates:31; rSTs:29 tree)
- Lentimicrobiaceae (isolates:1; rSTs:1)
- Muribaculaceae (isolates:31; rSTs:20 tree)
- Candidatus Homeothermus (isolates:1; rSTs:1)
- Candidatus Homeothermus arabinoxylanisolvens (isolates:1; rSTs:1)
- Duncaniella (isolates:8; rSTs:6 tree)
- Heminiphilus (isolates:1; rSTs:1)
- Heminiphilus faecis (isolates:1; rSTs:1)
- Lepagella (isolates:1; rSTs:1)
- Lepagella muris (isolates:1; rSTs:1)
- Muribaculum (isolates:13; rSTs:6 tree)
- Paramuribaculum (isolates:3; rSTs:2)
- Paramuribaculum intestinale (isolates:3; rSTs:2)
- Sangeribacter (isolates:2; rSTs:2)
- Sangeribacter muris (isolates:2; rSTs:2)
- Sodaliphilus (isolates:2; rSTs:1)
- Sodaliphilus pleomorphus (isolates:2; rSTs:1)
- Candidatus Homeothermus (isolates:1; rSTs:1)
- Odoribacteraceae (isolates:100; rSTs:56 tree)
- Butyricimonas (isolates:38; rSTs:21 tree)
- Butyricimonas faecalis (isolates:2; rSTs:2)
- Butyricimonas faecihominis (isolates:7; rSTs:2)
- Butyricimonas hominis (isolates:1; rSTs:1)
- Butyricimonas paravirosa (isolates:7; rSTs:4 tree)
- Butyricimonas sp. (isolates:5; rSTs:2 tree)
- Butyricimonas synergistica (isolates:4; rSTs:3 tree)
- Butyricimonas virosa (isolates:12; rSTs:7 tree)
- Culturomica (isolates:2; rSTs:1)
- Culturomica massiliensis (isolates:2; rSTs:1)
- Odoribacter (isolates:60; rSTs:34 tree)
- Butyricimonas (isolates:38; rSTs:21 tree)
- Paludibacteraceae (isolates:2; rSTs:2)
- Porphyromonadaceae (isolates:187; rSTs:176 tree)
- Gabonibacter (isolates:1; rSTs:1)
- Gabonibacter chumensis (isolates:1; rSTs:1)
- Lascolabacillus (isolates:1; rSTs:1)
- Lascolabacillus massiliensis (isolates:1; rSTs:1)
- Massilibacteroides (isolates:1; rSTs:1)
- Massilibacteroides vaginae (isolates:1; rSTs:1)
- Microbacter (isolates:1; rSTs:1)
- Microbacter margulisiae (isolates:1; rSTs:1)
- Porphyromonas (isolates:178; rSTs:167 tree)
- Porphyromonas asaccharolytica (isolates:2; rSTs:2)
- Porphyromonas bennonis (isolates:1; rSTs:1)
- Porphyromonas bobii (isolates:1; rSTs:1)
- Porphyromonas cangingivalis (isolates:6; rSTs:4 tree)
- Porphyromonas canoris (isolates:2; rSTs:2)
- Porphyromonas catoniae (isolates:2; rSTs:2)
- Porphyromonas circumdentaria (isolates:2; rSTs:2)
- Porphyromonas crevioricanis (isolates:6; rSTs:4 tree)
- Porphyromonas endodontalis (isolates:3; rSTs:1)
- Porphyromonas gingivalis (isolates:95; rSTs:94 tree)
- Porphyromonas gingivicanis (isolates:2; rSTs:2)
- Porphyromonas gulae (isolates:12; rSTs:15 tree)
- Porphyromonas levii (isolates:20; rSTs:14 tree)
- Porphyromonas loveana (isolates:1; rSTs:1)
- Porphyromonas macacae (isolates:7; rSTs:4 tree)
- Porphyromonas pasteri (isolates:1; rSTs:1)
- Porphyromonas somerae (isolates:2; rSTs:2)
- Porphyromonas sp. (isolates:9; rSTs:13 tree)
- Porphyromonas uenonis (isolates:3; rSTs:1)
- Porphyromonas vaginalis (isolates:1; rSTs:1)
- Sanguibacteroides (isolates:5; rSTs:5 tree)
- Gabonibacter (isolates:1; rSTs:1)
- Prevotellaceae (isolates:651; rSTs:438 tree)
- Alloprevotella (isolates:7; rSTs:7 tree)
- Hallella (isolates:8; rSTs:7 tree)
- Hoylesella (isolates:40; rSTs:27 tree)
- Hoylesella buccalis (isolates:9; rSTs:6 tree)
- Hoylesella enoeca (isolates:2; rSTs:1)
- Hoylesella loescheii (isolates:3; rSTs:1)
- Hoylesella marshii (isolates:2; rSTs:2)
- Hoylesella nanceiensis (isolates:5; rSTs:4 tree)
- Hoylesella oralis (isolates:4; rSTs:1)
- Hoylesella pleuritidis (isolates:2; rSTs:2)
- Hoylesella saccharolytica (isolates:2; rSTs:2)
- Hoylesella shahii (isolates:2; rSTs:2)
- Hoylesella timonensis (isolates:9; rSTs:6 tree)
- Leyella (isolates:9; rSTs:8 tree)
- Marseilla (isolates:1; rSTs:1)
- Marseilla massiliensis (isolates:1; rSTs:1)
- Palleniella (isolates:2; rSTs:2)
- Paraprevotella (isolates:12; rSTs:8 tree)
- Prevotella (isolates:248; rSTs:190 tree)
- Prevotella aff. ruminicola Tc2-24 (isolates:1; rSTs:1)
- Prevotella amnii (isolates:5; rSTs:4 tree)
- Prevotella aurantiaca (isolates:1; rSTs:1)
- Prevotella bivia (isolates:13; rSTs:10 tree)
- Prevotella brunnea (isolates:3; rSTs:3 tree)
- Prevotella communis (isolates:8; rSTs:6 tree)
- Prevotella conceptionensis (isolates:1; rSTs:1)
- Prevotella corporis (isolates:5; rSTs:4 tree)
- Prevotella dentalis (isolates:2; rSTs:1)
- Prevotella dentasini (isolates:1; rSTs:1)
- Prevotella denticola (isolates:17; rSTs:12 tree)
- Prevotella disiens (isolates:8; rSTs:4 tree)
- Prevotella falsenii (isolates:1; rSTs:1)
- Prevotella fusca (isolates:3; rSTs:2)
- Prevotella herbatica (isolates:1; rSTs:1)
- Prevotella histicola (isolates:13; rSTs:8 tree)
- Prevotella ihumii (isolates:1; rSTs:1)
- Prevotella illustrans (isolates:1; rSTs:1)
- Prevotella intermedia (isolates:34; rSTs:26 tree)
- Prevotella jejuni (isolates:5; rSTs:4 tree)
- Prevotella koreensis (isolates:1; rSTs:1)
- Prevotella lacticifex (isolates:11; rSTs:3 tree)
- Prevotella marseillensis (isolates:1; rSTs:1)
- Prevotella melaninogenica (isolates:31; rSTs:21 tree)
- Prevotella merdae (isolates:1; rSTs:1)
- Prevotella micans (isolates:3; rSTs:1)
- Prevotella multiformis (isolates:2; rSTs:2)
- Prevotella nigrescens (isolates:11; rSTs:7 tree)
- Prevotella pallens (isolates:3; rSTs:2)
- Prevotella pectinovora (isolates:5; rSTs:4 tree)
- Prevotella phocaeensis (isolates:1; rSTs:1)
- Prevotella scopos (isolates:4; rSTs:1)
- Prevotella sp. (isolates:44; rSTs:50 tree)
- Prevotella veroralis (isolates:5; rSTs:2)
- Prevotella vespertina (isolates:1; rSTs:1)
- Prevotellamassilia (isolates:1; rSTs:1)
- Prevotellamassilia timonensis (isolates:1; rSTs:1)
- Pseudoprevotella (isolates:1; rSTs:1)
- Pseudoprevotella muciniphila (isolates:1; rSTs:1)
- Segatella (isolates:305; rSTs:169 tree)
- Segatella albensis (isolates:2; rSTs:1)
- Segatella baroniae (isolates:7; rSTs:3 tree)
- Segatella bryantii (isolates:8; rSTs:7 tree)
- Segatella buccae (isolates:7; rSTs:5 tree)
- Segatella cerevisiae (isolates:1; rSTs:1)
- Segatella copri (isolates:256; rSTs:135 tree)
- Segatella hominis (isolates:4; rSTs:4 tree)
- Segatella maculosa (isolates:3; rSTs:2)
- Segatella oris (isolates:5; rSTs:3 tree)
- Segatella oulorum (isolates:3; rSTs:2)
- Segatella paludivivens (isolates:2; rSTs:1)
- Segatella salivae (isolates:7; rSTs:5 tree)
- Xylanibacter (isolates:17; rSTs:17 tree)
- Xylanibacter brevis (isolates:2; rSTs:2)
- Xylanibacter caecicola (isolates:1; rSTs:1)
- Xylanibacter muris (isolates:1; rSTs:1)
- Xylanibacter oryzae (isolates:1; rSTs:1)
- Xylanibacter rarus (isolates:1; rSTs:1)
- Xylanibacter rodentium (isolates:1; rSTs:1)
- Xylanibacter ruminicola (isolates:10; rSTs:10 tree)
- Rikenellaceae (isolates:391; rSTs:97 tree)
- Acetobacteroides (isolates:1; rSTs:1)
- Acetobacteroides hydrogenigenes (isolates:1; rSTs:1)
- Alistipes (isolates:384; rSTs:92 tree)
- Alistipes communis (isolates:7; rSTs:6 tree)
- Alistipes dispar (isolates:2; rSTs:2)
- Alistipes finegoldii (isolates:14; rSTs:10 tree)
- Alistipes hominis (isolates:1; rSTs:1)
- Alistipes ihumii (isolates:3; rSTs:1)
- Alistipes indistinctus (isolates:5; rSTs:3 tree)
- Alistipes inops (isolates:1; rSTs:1)
- Alistipes megaguti (isolates:1; rSTs:1)
- Alistipes montrealensis (isolates:1; rSTs:1)
- Alistipes muris (isolates:1; rSTs:1)
- Alistipes onderdonkii (isolates:283; rSTs:22 tree)
- Alistipes provencensis (isolates:1; rSTs:1)
- Alistipes putredinis (isolates:12; rSTs:7 tree)
- Alistipes senegalensis (isolates:7; rSTs:3 tree)
- Alistipes shahii (isolates:19; rSTs:12 tree)
- Alistipes sp. (isolates:19; rSTs:17 tree)
- Alistipes timonensis (isolates:7; rSTs:3 tree)
- Gallalistipes (isolates:1)
- Gallalistipes aquisgranensis (isolates:1)
- Millionella (isolates:1; rSTs:1)
- Millionella massiliensis (isolates:1; rSTs:1)
- Mucinivorans (isolates:1; rSTs:1)
- Mucinivorans hirudinis (isolates:1; rSTs:1)
- Rikenella (isolates:3; rSTs:2)
- Acetobacteroides (isolates:1; rSTs:1)
- Salinivirgaceae (isolates:1; rSTs:1)
- Tannerellaceae (isolates:510; rSTs:258 tree)
- Parabacteroides (isolates:491; rSTs:234 tree)
- Parabacteroides acidifaciens (isolates:2; rSTs:1)
- Parabacteroides bouchesdurhonensis (isolates:3; rSTs:2)
- Parabacteroides chartae (isolates:1; rSTs:1)
- Parabacteroides chinchillae (isolates:1; rSTs:1)
- Parabacteroides chongii (isolates:1; rSTs:1)
- Parabacteroides distasonis (isolates:246; rSTs:114 tree)
- Parabacteroides faecalis (isolates:1; rSTs:1)
- Parabacteroides faecis (isolates:5; rSTs:3 tree)
- Parabacteroides goldsteinii (isolates:35; rSTs:15 tree)
- Parabacteroides gordonii (isolates:5; rSTs:2)
- Parabacteroides hominis (isolates:1; rSTs:1)
- Parabacteroides johnsonii (isolates:16; rSTs:12 tree)
- Parabacteroides leei (isolates:1; rSTs:1)
- Parabacteroides massiliensis (isolates:1; rSTs:1)
- Parabacteroides merdae (isolates:127; rSTs:48 tree)
- Parabacteroides pacaensis (isolates:1; rSTs:1)
- Parabacteroides provencensis (isolates:1; rSTs:1)
- Parabacteroides segnis (isolates:1; rSTs:1)
- Parabacteroides sp. (isolates:41; rSTs:26 tree)
- Parabacteroides timonensis (isolates:1; rSTs:1)
- Tannerella (isolates:19; rSTs:24 tree)
- Parabacteroides (isolates:491; rSTs:234 tree)
- Tenuifilaceae (isolates:2; rSTs:2)
- Williamwhitmaniaceae (isolates:1; rSTs:1)
- Bacteroidaceae (isolates:3860; rSTs:1541)
- Marinilabiliales (isolates:89; rSTs:75 tree)
- Marinifilaceae (isolates:25; rSTs:21 tree)
- Marinilabiliaceae (isolates:31; rSTs:27 tree)
- Alkaliflexus (isolates:1; rSTs:1)
- Alkaliflexus imshenetskii (isolates:1; rSTs:1)
- Alkalitalea (isolates:2; rSTs:1)
- Alkalitalea saponilacus (isolates:2; rSTs:1)
- Anaerophaga (isolates:2; rSTs:2)
- Anaerophaga thermohalophila (isolates:2; rSTs:2)
- Breznakibacter (isolates:1; rSTs:1)
- Breznakibacter xylanolyticus (isolates:1; rSTs:1)
- Carboxylicivirga (isolates:6; rSTs:6 tree)
- Geofilum (isolates:2; rSTs:2)
- Labilibacter (isolates:2; rSTs:2)
- Marinilabilia (isolates:5; rSTs:4 tree)
- Natronoflexus (isolates:1; rSTs:1)
- Natronoflexus pectinivorans (isolates:1; rSTs:1)
- Plebeiobacterium (isolates:2; rSTs:2)
- Saccharicrinis (isolates:5; rSTs:4 tree)
- Thermophagus (isolates:2; rSTs:1)
- Thermophagus xiamenensis (isolates:2; rSTs:1)
- Alkaliflexus (isolates:1; rSTs:1)
- Prolixibacteraceae (isolates:33; rSTs:27 tree)
- Aquipluma (isolates:1)
- Aquipluma nitroreducens (isolates:1)
- Draconibacterium (isolates:6; rSTs:5 tree)
- Gaoshiqia (isolates:1; rSTs:1)
- Gaoshiqia sediminis (isolates:1; rSTs:1)
- Mangrovibacterium (isolates:3; rSTs:3 tree)
- Maribellus (isolates:7; rSTs:7 tree)
- Mariniphaga (isolates:2; rSTs:2)
- Prolixibacter (isolates:7; rSTs:4 tree)
- Sunxiuqinia (isolates:5; rSTs:4 tree)
- Tangfeifania (isolates:1; rSTs:1)
- Tangfeifania diversioriginum (isolates:1; rSTs:1)
- Aquipluma (isolates:1)
- Bacteroidales (isolates:5815; rSTs:2659)
- Chitinophagia (isolates:207; rSTs:178 tree)
- Chitinophagales (isolates:207; rSTs:178 tree)
- Chitinophagaceae (isolates:207; rSTs:178 tree)
- Agriterribacter (isolates:1; rSTs:1)
- Agriterribacter humi (isolates:1; rSTs:1)
- Arachidicoccus (isolates:4; rSTs:4 tree)
- Aridibaculum (isolates:1; rSTs:1)
- Aridibaculum aurantiacum (isolates:1; rSTs:1)
- Asinibacterium (isolates:2; rSTs:2)
- Asinibacterium sp. (isolates:2; rSTs:2)
- Chitinophaga (isolates:81; rSTs:73 tree)
- Chitinophaga agri (isolates:1; rSTs:1)
- Chitinophaga agrisoli (isolates:1; rSTs:1)
- Chitinophaga alhagiae (isolates:1; rSTs:1)
- Chitinophaga arvensicola (isolates:1; rSTs:1)
- Chitinophaga barathri (isolates:2; rSTs:1)
- Chitinophaga caeni (isolates:1; rSTs:1)
- Chitinophaga chungangae (isolates:1; rSTs:1)
- Chitinophaga costaii (isolates:2; rSTs:1)
- Chitinophaga cymbidii (isolates:1; rSTs:1)
- Chitinophaga deserti (isolates:1; rSTs:1)
- Chitinophaga dinghuensis (isolates:1; rSTs:1)
- Chitinophaga eiseniae (isolates:1; rSTs:1)
- Chitinophaga filiformis (isolates:1; rSTs:1)
- Chitinophaga flava (isolates:1; rSTs:1)
- Chitinophaga fulva (isolates:1; rSTs:1)
- Chitinophaga ginsengisegetis (isolates:5; rSTs:2)
- Chitinophaga ginsengisoli (isolates:1; rSTs:1)
- Chitinophaga horti (isolates:1; rSTs:1)
- Chitinophaga hostae (isolates:1; rSTs:1)
- Chitinophaga japonensis (isolates:1; rSTs:1)
- Chitinophaga jiangningensis (isolates:1; rSTs:1)
- Chitinophaga lutea (isolates:1; rSTs:1)
- Chitinophaga niabensis (isolates:1; rSTs:1)
- Chitinophaga niastensis (isolates:1; rSTs:1)
- Chitinophaga nivalis (isolates:2; rSTs:1)
- Chitinophaga oryzae (isolates:2; rSTs:2)
- Chitinophaga oryziterrae (isolates:1; rSTs:1)
- Chitinophaga parva (isolates:1; rSTs:1)
- Chitinophaga pendula (isolates:1)
- Chitinophaga pinensis (isolates:2; rSTs:2)
- Chitinophaga polysaccharea (isolates:2; rSTs:2)
- Chitinophaga qingshengii (isolates:1; rSTs:1)
- Chitinophaga rhizophila (isolates:1; rSTs:1)
- Chitinophaga rhizosphaerae (isolates:1; rSTs:1)
- Chitinophaga rupis (isolates:1; rSTs:1)
- Chitinophaga sancti (isolates:3; rSTs:1)
- Chitinophaga sedimenti (isolates:1)
- Chitinophaga silvatica (isolates:1; rSTs:1)
- Chitinophaga silvisoli (isolates:1; rSTs:1)
- Chitinophaga skermanii (isolates:1; rSTs:1)
- Chitinophaga solisilvae (isolates:2; rSTs:2)
- Chitinophaga sp. (isolates:19; rSTs:23 tree)
- Chitinophaga terrae (ex Kim and Jung 2007) (isolates:3; rSTs:2)
- Chitinophaga tropicalis (isolates:1; rSTs:1)
- Chitinophaga varians (isolates:1; rSTs:1)
- Chitinophaga vietnamensis (isolates:2; rSTs:1)
- [Flexibacter] sp. (isolates:1; rSTs:1)
- Cnuella (isolates:2; rSTs:1)
- Cnuella takakiae (isolates:2; rSTs:1)
- Deminuibacter (isolates:1; rSTs:1)
- Deminuibacter soli (isolates:1; rSTs:1)
- Dinghuibacter (isolates:1; rSTs:1)
- Dinghuibacter silviterrae (isolates:1; rSTs:1)
- Edaphocola (isolates:2; rSTs:2)
- Ferruginibacter (isolates:2; rSTs:2)
- Filimonas (isolates:7; rSTs:5 tree)
- Flaviaesturariibacter (isolates:2; rSTs:2)
- Flavihumibacter (isolates:11; rSTs:10 tree)
- Flavihumibacter cheonanensis (isolates:1; rSTs:1)
- Flavihumibacter fluminis (isolates:1; rSTs:1)
- Flavihumibacter fluvii (isolates:1; rSTs:1)
- Flavihumibacter petaseus (isolates:1; rSTs:1)
- Flavihumibacter profundi (isolates:1; rSTs:1)
- Flavihumibacter rivuli (isolates:1; rSTs:1)
- Flavihumibacter soli (isolates:1; rSTs:1)
- Flavihumibacter solisilvae (isolates:1; rSTs:1)
- Flavihumibacter sp. (isolates:2; rSTs:1)
- Flavihumibacter stibioxidans (isolates:1; rSTs:1)
- Flavipsychrobacter (isolates:1; rSTs:1)
- Flavipsychrobacter stenotrophus (isolates:1; rSTs:1)
- Flavisolibacter (isolates:6; rSTs:6 tree)
- Flavitalea (isolates:1; rSTs:1)
- Flavitalea sp. (isolates:1; rSTs:1)
- Foetidibacter (isolates:1; rSTs:1)
- Foetidibacter luteolus (isolates:1; rSTs:1)
- Ginsengibacter (isolates:1; rSTs:1)
- Ginsengibacter hankyongi (isolates:1; rSTs:1)
- Gynurincola (isolates:1; rSTs:1)
- Gynurincola endophyticus (isolates:1; rSTs:1)
- Hanamia (isolates:1; rSTs:1)
- Hanamia caeni (isolates:1; rSTs:1)
- Haoranjiania (isolates:1; rSTs:1)
- Haoranjiania flava (isolates:1; rSTs:1)
- Hydrobacter (isolates:1; rSTs:1)
- Hydrobacter penzbergensis (isolates:1; rSTs:1)
- Hydrotalea (isolates:8; rSTs:2)
- Ilyomonas (isolates:1; rSTs:1)
- Ilyomonas limi (isolates:1; rSTs:1)
- Lacibacter (isolates:3; rSTs:3 tree)
- Limnovirga (isolates:1; rSTs:1)
- Limnovirga soli (isolates:1; rSTs:1)
- Longitalea (isolates:2; rSTs:2)
- Niabella (isolates:14; rSTs:9 tree)
- Niabella agricola (isolates:1; rSTs:1)
- Niabella aurantiaca (isolates:1; rSTs:1)
- Niabella beijingensis (isolates:2; rSTs:1)
- Niabella drilacis (isolates:1; rSTs:1)
- Niabella ginsengisoli (isolates:1; rSTs:1)
- Niabella ginsenosidivorans (isolates:1; rSTs:1)
- Niabella hibiscisoli (isolates:1)
- Niabella pedocola (isolates:1; rSTs:1)
- Niabella soli (isolates:1; rSTs:1)
- Niabella sp. (isolates:2)
- Niabella yanshanensis (isolates:2; rSTs:1)
- Niastella (isolates:9; rSTs:7 tree)
- Panacibacter (isolates:2; rSTs:2)
- Paracnuella (isolates:1; rSTs:1)
- Paracnuella aquatica (isolates:1; rSTs:1)
- Parafilimonas (isolates:1; rSTs:1)
- Parafilimonas terrae (isolates:1; rSTs:1)
- Paraflavitalea (isolates:5; rSTs:4 tree)
- Phnomibacter (isolates:1; rSTs:1)
- Phnomibacter ginsenosidimutans (isolates:1; rSTs:1)
- Pinibacter (isolates:2; rSTs:2)
- Pseudobacter (isolates:2; rSTs:1)
- Pseudobacter ginsenosidimutans (isolates:2; rSTs:1)
- Pseudocnuella (isolates:1; rSTs:1)
- Pseudocnuella soli (isolates:1; rSTs:1)
- Pseudoflavitalea (isolates:1; rSTs:1)
- Pseudoflavitalea rhizosphaerae (isolates:1; rSTs:1)
- Puia (isolates:1; rSTs:1)
- Puia dinghuensis (isolates:1; rSTs:1)
- Sediminibacterium (isolates:10; rSTs:8 tree)
- Sediminibacterium ginsengisoli (isolates:1; rSTs:1)
- Sediminibacterium goheungense (isolates:1; rSTs:1)
- Sediminibacterium magnilacihabitans (isolates:1; rSTs:1)
- Sediminibacterium roseum (isolates:1; rSTs:1)
- Sediminibacterium salmoneum (isolates:1)
- Sediminibacterium soli (isolates:1; rSTs:1)
- Sediminibacterium sp. (isolates:4; rSTs:3 tree)
- Segetibacter (isolates:2; rSTs:2)
- Taibaiella (isolates:5; rSTs:5 tree)
- Terrimonas (isolates:2; rSTs:2)
- Thermoflavifilum (isolates:2; rSTs:2)
- Agriterribacter (isolates:1; rSTs:1)
- Chitinophagaceae (isolates:207; rSTs:178 tree)
- Chitinophagales (isolates:207; rSTs:178 tree)
- Cytophagia (isolates:680; rSTs:597 tree)
- Cytophagales (isolates:680; rSTs:597 tree)
- Amoebophilaceae (isolates:13; rSTs:12 tree)
- Candidatus Amoebophilus (isolates:1; rSTs:1)
- Candidatus Amoebophilus asiaticus (isolates:1; rSTs:1)
- Candidatus Cardinium (isolates:12; rSTs:11 tree)
- Candidatus Cardinium hertigii (isolates:1; rSTs:1)
- Candidatus Cardinium sp. (isolates:4; rSTs:3 tree)
- Cardinium endosymbiont of Bemisia tabaci (isolates:2; rSTs:2)
- Cardinium endosymbiont of Culicoides punctatus (isolates:1; rSTs:1)
- Cardinium endosymbiont of Dermatophagoides farinae (isolates:1; rSTs:1)
- Cardinium endosymbiont of Encarsia pergandiella (isolates:1; rSTs:1)
- Cardinium endosymbiont of Oedothorax gibbosus (isolates:1; rSTs:1)
- Cardinium endosymbiont of Sogatella furcifera (isolates:1; rSTs:1)
- Candidatus Amoebophilus (isolates:1; rSTs:1)
- Bernardetiaceae (isolates:2; rSTs:2)
- Catalimonadaceae (isolates:4; rSTs:2)
- Cesiribacteraceae (isolates:3; rSTs:3 tree)
- Cyclobacteriaceae (isolates:125; rSTs:113 tree)
- Algoriphagus (isolates:59; rSTs:54 tree)
- Algoriphagus aestuariicola (isolates:1; rSTs:1)
- Algoriphagus algorifonticola (isolates:1; rSTs:1)
- Algoriphagus alkaliphilus (isolates:1; rSTs:1)
- Algoriphagus antarcticus (isolates:2; rSTs:1)
- Algoriphagus aquaeductus (isolates:1; rSTs:1)
- Algoriphagus aquimarinus (isolates:2; rSTs:2)
- Algoriphagus aquimaris (isolates:1; rSTs:1)
- Algoriphagus boritolerans (isolates:1; rSTs:1)
- Algoriphagus boseongensis (isolates:1; rSTs:1)
- Algoriphagus chordae (isolates:1; rSTs:1)
- Algoriphagus faecimaris (isolates:2; rSTs:1)
- Algoriphagus formosus (isolates:1; rSTs:1)
- Algoriphagus halophilus (isolates:1; rSTs:1)
- Algoriphagus hitonicola (isolates:1; rSTs:1)
- Algoriphagus iocasae (isolates:1; rSTs:1)
- Algoriphagus kandeliae (isolates:1; rSTs:1)
- Algoriphagus lacus (isolates:1; rSTs:1)
- Algoriphagus limi (isolates:1; rSTs:1)
- Algoriphagus litoralis (isolates:1; rSTs:1)
- Algoriphagus locisalis (isolates:1; rSTs:1)
- Algoriphagus lutimaris (isolates:1; rSTs:1)
- Algoriphagus machipongonensis (isolates:1; rSTs:1)
- Algoriphagus mannitolivorans (isolates:1; rSTs:1)
- Algoriphagus marincola (isolates:2; rSTs:2)
- Algoriphagus marinus (isolates:1; rSTs:1)
- Algoriphagus oliviformis (isolates:1; rSTs:1)
- Algoriphagus ornithinivorans (isolates:1; rSTs:1)
- Algoriphagus pacificus (isolates:1; rSTs:1)
- Algoriphagus ratkowskyi (isolates:3; rSTs:1)
- Algoriphagus resistens (isolates:1; rSTs:1)
- Algoriphagus sanaruensis (isolates:1; rSTs:1)
- Algoriphagus sp. (isolates:15; rSTs:16 tree)
- Algoriphagus terrigena (isolates:2; rSTs:1)
- Algoriphagus vanfongensis (isolates:1; rSTs:1)
- Algoriphagus winogradskyi (isolates:1; rSTs:1)
- Algoriphagus yeomjeoni (isolates:1; rSTs:1)
- Algoriphagus zhangzhouensis (isolates:2; rSTs:1)
- Aquiflexum (isolates:5; rSTs:5 tree)
- Arthrospiribacter (isolates:1; rSTs:1)
- Arthrospiribacter ruber (isolates:1; rSTs:1)
- Belliella (isolates:10; rSTs:8 tree)
- Belliella alkalica (isolates:1; rSTs:1)
- Belliella aquatica (isolates:2; rSTs:1)
- Belliella baltica (isolates:1; rSTs:1)
- Belliella buryatensis (isolates:1; rSTs:1)
- Belliella calami (isolates:1; rSTs:1)
- Belliella filtrata (isolates:1; rSTs:1)
- Belliella kenyensis (isolates:2; rSTs:1)
- Belliella pelovolcani (isolates:1; rSTs:1)
- Cecembia (isolates:3; rSTs:3 tree)
- Cognataquiflexum (isolates:3; rSTs:3 tree)
- Cyclobacterium (isolates:15; rSTs:13 tree)
- Cyclobacterium amurskyense (isolates:1; rSTs:1)
- Cyclobacterium jeungdonense (isolates:2; rSTs:1)
- Cyclobacterium lianum (isolates:1; rSTs:1)
- Cyclobacterium marinum (isolates:2; rSTs:2)
- Cyclobacterium plantarum (isolates:1; rSTs:1)
- Cyclobacterium qasimii (isolates:2; rSTs:1)
- Cyclobacterium roseum (isolates:1; rSTs:1)
- Cyclobacterium salsum (isolates:1; rSTs:1)
- Cyclobacterium sp. (isolates:2; rSTs:2)
- Cyclobacterium xiamenense (isolates:2; rSTs:2)
- Echinicola (isolates:13; rSTs:11 tree)
- Echinicola arenosa (isolates:1; rSTs:1)
- Echinicola jeungdonensis (isolates:1; rSTs:1)
- Echinicola marina (isolates:1; rSTs:1)
- Echinicola pacifica (isolates:2; rSTs:1)
- Echinicola rosea (isolates:2; rSTs:1)
- Echinicola salinicaeni (isolates:1; rSTs:1)
- Echinicola shivajiensis (isolates:1; rSTs:1)
- Echinicola soli (isolates:1; rSTs:1)
- Echinicola sp. (isolates:1; rSTs:1)
- Echinicola strongylocentroti (isolates:1; rSTs:1)
- Echinicola vietnamensis (isolates:1; rSTs:1)
- Indibacter (isolates:1; rSTs:1)
- Indibacter alkaliphilus (isolates:1; rSTs:1)
- Litoribacter (isolates:3; rSTs:2 tree)
- Lunatibacter (isolates:1; rSTs:1)
- Lunatibacter salilacus (isolates:1; rSTs:1)
- Lunatimonas (isolates:2; rSTs:2)
- Mariniradius (isolates:2; rSTs:2)
- Mongoliibacter (isolates:1; rSTs:1)
- Mongoliibacter ruber (isolates:1; rSTs:1)
- Mongoliitalea (isolates:2; rSTs:2)
- Nitritalea (isolates:1; rSTs:1)
- Nitritalea halalkaliphila (isolates:1; rSTs:1)
- Pararhodonellum (isolates:1; rSTs:1)
- Pararhodonellum marinum (isolates:1; rSTs:1)
- Penaeicola (isolates:1; rSTs:1)
- Penaeicola halotolerans (isolates:1; rSTs:1)
- Pleomorphovibrio (isolates:1; rSTs:1)
- Pleomorphovibrio marinus (isolates:1; rSTs:1)
- Algoriphagus (isolates:59; rSTs:54 tree)
- Cytophagaceae (isolates:56; rSTs:52 tree)
- Anditalea (isolates:1; rSTs:1)
- Anditalea andensis (isolates:1; rSTs:1)
- Chryseosolibacter (isolates:2; rSTs:2)
- Cytophaga (isolates:3; rSTs:2)
- Dawidia (isolates:2; rSTs:2)
- Rhabdobacter (isolates:1; rSTs:1)
- Rhabdobacter roseus (isolates:1; rSTs:1)
- Rhodocytophaga (isolates:2; rSTs:2)
- Rhodonellum (isolates:2; rSTs:1)
- Rhodonellum psychrophilum (isolates:2; rSTs:1)
- Rudanella (isolates:2; rSTs:2)
- Siphonobacter (isolates:7; rSTs:7 tree)
- Spirosoma (isolates:32; rSTs:30 tree)
- Spirosoma aerolatum (isolates:1; rSTs:1)
- Spirosoma agri (isolates:1; rSTs:1)
- Spirosoma arboris (isolates:1; rSTs:1)
- Spirosoma aureum (isolates:1; rSTs:1)
- Spirosoma endbachense (isolates:1; rSTs:1)
- Spirosoma endophyticum (isolates:1; rSTs:1)
- Spirosoma fluviale (isolates:1; rSTs:1)
- Spirosoma foliorum (isolates:1; rSTs:1)
- Spirosoma lacussanchae (isolates:1; rSTs:1)
- Spirosoma liriopis (isolates:1; rSTs:1)
- Spirosoma luteum (isolates:1; rSTs:1)
- Spirosoma montaniterrae (isolates:1; rSTs:1)
- Spirosoma oryzae (isolates:1; rSTs:1)
- Spirosoma oryzicola (isolates:1; rSTs:1)
- Spirosoma panaciterrae (isolates:1; rSTs:1)
- Spirosoma pollinicola (isolates:1; rSTs:1)
- Spirosoma profusum (isolates:1; rSTs:1)
- Spirosoma radiotolerans (isolates:1; rSTs:1)
- Spirosoma rhododendri (isolates:1; rSTs:1)
- Spirosoma rigui (isolates:1; rSTs:1)
- Spirosoma sordidisoli (isolates:1; rSTs:1)
- Spirosoma sp. (isolates:3; rSTs:3 tree)
- Spirosoma spitsbergense (isolates:1; rSTs:1)
- Spirosoma taeanense (isolates:1; rSTs:1)
- Spirosoma telluris (isolates:2; rSTs:1)
- Spirosoma terrae (isolates:1; rSTs:1)
- Spirosoma utsteinense (isolates:2; rSTs:1)
- Spirosoma validum (isolates:1; rSTs:1)
- Sporocytophaga (isolates:2; rSTs:2)
- Sporocytophaga myxococcoides (isolates:2; rSTs:2)
- Anditalea (isolates:1; rSTs:1)
- Flammeovirgaceae (isolates:23; rSTs:17 tree)
- Chondrinema (isolates:1; rSTs:1)
- Chondrinema litorale (isolates:1; rSTs:1)
- Flammeovirga (isolates:15; rSTs:11 tree)
- Flammeovirga agarivorans (isolates:1; rSTs:1)
- Flammeovirga aprica (isolates:1; rSTs:1)
- Flammeovirga kamogawensis (isolates:3; rSTs:1)
- Flammeovirga pacifica (isolates:1; rSTs:1)
- Flammeovirga pectinis (isolates:1; rSTs:1)
- Flammeovirga sp. (isolates:5; rSTs:5 tree)
- Flammeovirga yaeyamensis (isolates:3; rSTs:1)
- Flexithrix (isolates:1; rSTs:1)
- Flexithrix dorotheae (isolates:1; rSTs:1)
- Imperialibacter (isolates:4; rSTs:2)
- Marinigracilibium (isolates:1; rSTs:1)
- Marinigracilibium pacificum (isolates:1; rSTs:1)
- Sediminitomix (isolates:1; rSTs:1)
- Sediminitomix flava (isolates:1; rSTs:1)
- Chondrinema (isolates:1; rSTs:1)
- Flexibacteraceae (isolates:1; rSTs:1)
- Fulvivirgaceae (isolates:19; rSTs:16 tree)
- Chryseolinea (isolates:3; rSTs:3 tree)
- Chryseotalea (isolates:1; rSTs:1)
- Chryseotalea sanaruensis (isolates:1; rSTs:1)
- Fulvivirga (isolates:11; rSTs:8 tree)
- Fulvivirga aurantia (isolates:1)
- Fulvivirga imtechensis (isolates:1; rSTs:1)
- Fulvivirga kasyanovii (isolates:1)
- Fulvivirga ligni (isolates:1; rSTs:1)
- Fulvivirga lutea (isolates:1; rSTs:1)
- Fulvivirga lutimaris (isolates:1; rSTs:1)
- Fulvivirga marina (isolates:1; rSTs:1)
- Fulvivirga maritima (isolates:1; rSTs:1)
- Fulvivirga sedimenti (isolates:1)
- Fulvivirga sediminis (isolates:1; rSTs:1)
- Fulvivirga ulvae (isolates:1; rSTs:1)
- Ohtaekwangia (isolates:1; rSTs:1)
- Ohtaekwangia koreensis (isolates:1; rSTs:1)
- Parachryseolinea (isolates:1; rSTs:1)
- Parachryseolinea silvisoli (isolates:1; rSTs:1)
- Pseudochryseolinea (isolates:1; rSTs:1)
- Pseudochryseolinea flava (isolates:1; rSTs:1)
- Xanthovirga (isolates:1; rSTs:1)
- Xanthovirga aplysinae (isolates:1; rSTs:1)
- Hymenobacteraceae (isolates:227; rSTs:196 tree)
- Adhaeribacter (isolates:9; rSTs:9 tree)
- Adhaeribacter aerolatus (isolates:1; rSTs:1)
- Adhaeribacter aquaticus (isolates:1; rSTs:1)
- Adhaeribacter arboris (isolates:1; rSTs:1)
- Adhaeribacter pallidiroseus (isolates:1; rSTs:1)
- Adhaeribacter radiodurans (isolates:1; rSTs:1)
- Adhaeribacter rhizoryzae (isolates:1; rSTs:1)
- Adhaeribacter soli (isolates:1; rSTs:1)
- Adhaeribacter swui (isolates:1; rSTs:1)
- Adhaeribacter terrigena (isolates:1; rSTs:1)
- Botryobacter (isolates:1; rSTs:1)
- Botryobacter ruber (isolates:1; rSTs:1)
- Hymenobacter (isolates:136; rSTs:126 tree)
- Hymenobacter actinosclerus (isolates:1; rSTs:1)
- Hymenobacter aerilatus (isolates:1; rSTs:1)
- Hymenobacter aerophilus (isolates:1; rSTs:1)
- Hymenobacter amundsenii (isolates:1; rSTs:1)
- Hymenobacter aquaticus (isolates:1; rSTs:1)
- Hymenobacter arizonensis (isolates:1; rSTs:1)
- Hymenobacter armeniacus (isolates:1; rSTs:1)
- Hymenobacter artigasi (isolates:1; rSTs:1)
- Hymenobacter baengnokdamensis (isolates:1; rSTs:1)
- Hymenobacter busanensis (isolates:2; rSTs:1)
- Hymenobacter caeli (isolates:1; rSTs:1)
- Hymenobacter canadensis (isolates:1; rSTs:1)
- Hymenobacter cavernae (isolates:1; rSTs:1)
- Hymenobacter cellulosilyticus (isolates:1; rSTs:1)
- Hymenobacter cellulosivorans (isolates:1; rSTs:1)
- Hymenobacter chitinivorans (isolates:1; rSTs:1)
- Hymenobacter citatus (isolates:1; rSTs:1)
- Hymenobacter coccineus (isolates:1; rSTs:1)
- Hymenobacter crusticola (isolates:1; rSTs:1)
- Hymenobacter cyanobacteriorum (isolates:1; rSTs:1)
- Hymenobacter daecheongensis (isolates:1; rSTs:1)
- Hymenobacter defluvii (isolates:1)
- Hymenobacter duratus (isolates:1; rSTs:1)
- Hymenobacter edaphi (isolates:1; rSTs:1)
- Hymenobacter elongatus (isolates:1; rSTs:1)
- Hymenobacter endophyticus (isolates:1; rSTs:1)
- Hymenobacter fodinae (isolates:1; rSTs:1)
- Hymenobacter frigidus (isolates:1; rSTs:1)
- Hymenobacter gelipurpurascens (isolates:1; rSTs:1)
- Hymenobacter ginkgonis (isolates:1; rSTs:1)
- Hymenobacter glacialis (isolates:1; rSTs:1)
- Hymenobacter glacieicola (isolates:1; rSTs:1)
- Hymenobacter gummosus (isolates:1; rSTs:1)
- Hymenobacter guriensis (isolates:1; rSTs:1)
- Hymenobacter jejuensis (isolates:1; rSTs:1)
- Hymenobacter jeollabukensis (isolates:1; rSTs:1)
- Hymenobacter jeongseonensis (isolates:1; rSTs:1)
- Hymenobacter lapidarius (isolates:1; rSTs:1)
- Hymenobacter lapidiphilus (isolates:1; rSTs:1)
- Hymenobacter latericoloratus (isolates:1; rSTs:1)
- Hymenobacter lucidus (isolates:1; rSTs:1)
- Hymenobacter lutimineralis (isolates:1; rSTs:1)
- Hymenobacter metallicola (isolates:1; rSTs:1)
- Hymenobacter metallilatus (isolates:1; rSTs:1)
- Hymenobacter montanus (isolates:1; rSTs:1)
- Hymenobacter monticola (isolates:1; rSTs:1)
- Hymenobacter mucosus (isolates:1; rSTs:1)
- Hymenobacter negativus (isolates:2; rSTs:2)
- Hymenobacter nitidus (isolates:1; rSTs:1)
- Hymenobacter nivis (isolates:1; rSTs:1)
- Hymenobacter norwichensis (isolates:1; rSTs:1)
- Hymenobacter oligotrophus (isolates:1; rSTs:1)
- Hymenobacter perfusus (isolates:1; rSTs:1)
- Hymenobacter persicinus (isolates:1; rSTs:1)
- Hymenobacter pini (isolates:1; rSTs:1)
- Hymenobacter piscis (isolates:1; rSTs:1)
- Hymenobacter polaris (isolates:1; rSTs:1)
- Hymenobacter profundi (isolates:1; rSTs:1)
- Hymenobacter properus (isolates:1; rSTs:1)
- Hymenobacter psoromatis (isolates:3; rSTs:2)
- Hymenobacter psychrophilus (isolates:1; rSTs:1)
- Hymenobacter psychrotolerans (isolates:1; rSTs:1)
- Hymenobacter qilianensis (isolates:2; rSTs:1)
- Hymenobacter radiodurans (isolates:1; rSTs:1)
- Hymenobacter rigui (isolates:1; rSTs:1)
- Hymenobacter roseosalivarius (isolates:1; rSTs:1)
- Hymenobacter rubidus (isolates:1; rSTs:1)
- Hymenobacter rubripertinctus (isolates:1; rSTs:1)
- Hymenobacter ruricola (isolates:1; rSTs:1)
- Hymenobacter sedentarius (isolates:1; rSTs:1)
- Hymenobacter sediminicola (isolates:1; rSTs:1)
- Hymenobacter sediminis (isolates:1; rSTs:1)
- Hymenobacter setariae (isolates:1; rSTs:1)
- Hymenobacter siberiensis (isolates:3; rSTs:3 tree)
- Hymenobacter sp. (isolates:43; rSTs:37 tree)
- Hymenobacter sublimis (isolates:1; rSTs:1)
- Hymenobacter swuensis (isolates:1; rSTs:1)
- Hymenobacter taeanensis (isolates:1; rSTs:1)
- Hymenobacter telluris (isolates:1; rSTs:1)
- Hymenobacter terrenus (isolates:1; rSTs:1)
- Hymenobacter terrestris (isolates:1; rSTs:1)
- Hymenobacter terricola (isolates:1; rSTs:1)
- Hymenobacter tibetensis (isolates:1; rSTs:1)
- Hymenobacter translucens (isolates:1; rSTs:1)
- Hymenobacter volaticus (isolates:1; rSTs:1)
- Hymenobacter wooponensis (isolates:1; rSTs:1)
- Hymenobacter yonginensis (isolates:1; rSTs:1)
- Nibribacter (isolates:1; rSTs:1)
- Nibribacter ruber (isolates:1; rSTs:1)
- Pontibacter (isolates:54; rSTs:44 tree)
- Pontibacter actiniarum (isolates:3; rSTs:1)
- Pontibacter akesuensis (isolates:3; rSTs:1)
- Pontibacter amylolyticus (isolates:1; rSTs:1)
- Pontibacter anaerobius (isolates:1; rSTs:1)
- Pontibacter aquaedesilientis (isolates:1; rSTs:1)
- Pontibacter arcticus (isolates:1; rSTs:1)
- Pontibacter aydingkolensis (isolates:1; rSTs:1)
- Pontibacter beigongshangensis (isolates:1; rSTs:1)
- Pontibacter burrus (isolates:1; rSTs:1)
- Pontibacter cellulosilyticus (isolates:1; rSTs:1)
- Pontibacter chinhatensis (isolates:1; rSTs:1)
- Pontibacter deserti (isolates:1; rSTs:1)
- Pontibacter diazotrophicus (isolates:1; rSTs:1)
- Pontibacter fetidus (isolates:1; rSTs:1)
- Pontibacter flavimaris (isolates:1; rSTs:1)
- Pontibacter harenae (isolates:1)
- Pontibacter indicus (isolates:1; rSTs:1)
- Pontibacter kalidii (isolates:1; rSTs:1)
- Pontibacter korlensis (isolates:1; rSTs:1)
- Pontibacter liquoris (isolates:1; rSTs:1)
- Pontibacter litorisediminis (isolates:1; rSTs:1)
- Pontibacter lucknowensis (isolates:1; rSTs:1)
- Pontibacter mangrovi (isolates:1; rSTs:1)
- Pontibacter mucosus (isolates:1; rSTs:1)
- Pontibacter oryzae (isolates:1; rSTs:1)
- Pontibacter pamirensis (isolates:1; rSTs:1)
- Pontibacter populi (isolates:1; rSTs:1)
- Pontibacter pudoricolor (isolates:1; rSTs:1)
- Pontibacter qinzhouensis (isolates:1; rSTs:1)
- Pontibacter ramchanderi (isolates:1; rSTs:1)
- Pontibacter roseus (isolates:1; rSTs:1)
- Pontibacter ruber (isolates:1; rSTs:1)
- Pontibacter russatus (isolates:1; rSTs:1)
- Pontibacter silvestris (isolates:1; rSTs:1)
- Pontibacter sp. (isolates:12; rSTs:8 tree)
- Pontibacter ummariensis (isolates:2; rSTs:1)
- Pontibacter virosus (isolates:1; rSTs:1)
- Pontibacter vulgaris (isolates:1; rSTs:1)
- Rufibacter (isolates:25; rSTs:14 tree)
- Rufibacter aurantiacus (isolates:1; rSTs:1)
- Rufibacter glacialis (isolates:2; rSTs:1)
- Rufibacter hautae (isolates:1; rSTs:1)
- Rufibacter immobilis (isolates:1; rSTs:1)
- Rufibacter latericius (isolates:1; rSTs:1)
- Rufibacter quisquiliarum (isolates:1; rSTs:1)
- Rufibacter radiotolerans (isolates:1; rSTs:1)
- Rufibacter roseolus (isolates:1; rSTs:1)
- Rufibacter roseus (isolates:1; rSTs:1)
- Rufibacter ruber (isolates:1; rSTs:1)
- Rufibacter sediminis (isolates:2; rSTs:1)
- Rufibacter sp. (isolates:11; rSTs:2 tree)
- Rufibacter tibetensis (isolates:1; rSTs:1)
- Sabulibacter (isolates:1; rSTs:1)
- Sabulibacter ruber (isolates:1; rSTs:1)
- Adhaeribacter (isolates:9; rSTs:9 tree)
- Mangrovivirgaceae (isolates:2; rSTs:2)
- Marivirgaceae (isolates:10; rSTs:9 tree)
- Microscillaceae (isolates:2; rSTs:2)
- Persicobacteraceae (isolates:3; rSTs:3 tree)
- Raineyaceae (isolates:1; rSTs:1)
- Reichenbachiellaceae (isolates:12; rSTs:12 tree)
- Ekhidna (isolates:1; rSTs:1)
- Ekhidna lutea (isolates:1; rSTs:1)
- Marinoscillum (isolates:2; rSTs:2)
- Reichenbachiella (isolates:9; rSTs:9 tree)
- Reichenbachiella agariperforans (isolates:2; rSTs:2)
- Reichenbachiella agarivorans (isolates:1; rSTs:1)
- Reichenbachiella carrageenanivorans (isolates:1; rSTs:1)
- Reichenbachiella faecimaris (isolates:1; rSTs:1)
- Reichenbachiella sp. (isolates:2; rSTs:2 tree)
- Reichenbachiella ulvae (isolates:1; rSTs:1)
- Reichenbachiella versicolor (isolates:1; rSTs:1)
- Ekhidna (isolates:1; rSTs:1)
- Rhodocytophagaceae (isolates:4; rSTs:4 tree)
- Roseivirgaceae (isolates:20; rSTs:13 tree)
- Roseivirga (isolates:20; rSTs:13 tree)
- Roseivirga echinicomitans (isolates:1; rSTs:1)
- Roseivirga ehrenbergii (isolates:2; rSTs:1)
- Roseivirga misakiensis (isolates:1; rSTs:1)
- Roseivirga pacifica (isolates:8; rSTs:3 tree)
- Roseivirga seohaensis (isolates:2; rSTs:2)
- Roseivirga sp. (isolates:1; rSTs:1)
- Roseivirga spongicola (isolates:2; rSTs:2)
- Roseivirga thermotolerans (isolates:3; rSTs:2)
- Roseivirga (isolates:20; rSTs:13 tree)
- Shiellaceae (isolates:1)
- Spirosomataceae (isolates:147; rSTs:132 tree)
- Aquirufa (isolates:22; rSTs:20)
- Aquirufa antheringensis (isolates:7; rSTs:7)
- Aquirufa aurantiipilula (isolates:2; rSTs:2)
- Aquirufa beregesia (isolates:1; rSTs:1)
- Aquirufa ecclesiirivi (isolates:4; rSTs:4)
- Aquirufa lenticrescens (isolates:1; rSTs:1)
- Aquirufa nivalisilvae (isolates:4; rSTs:4)
- Aquirufa regiilacus (isolates:2)
- Aquirufa rosea (isolates:1; rSTs:1)
- Arcicella (isolates:10; rSTs:8 tree)
- Arcticibacterium (isolates:1; rSTs:1)
- Arcticibacterium luteifluviistationis (isolates:1; rSTs:1)
- Arsenicibacter (isolates:1; rSTs:1)
- Arsenicibacter rosenii (isolates:1; rSTs:1)
- Arundinibacter (isolates:1; rSTs:1)
- Arundinibacter roseus (isolates:1; rSTs:1)
- Dyadobacter (isolates:59; rSTs:49 tree)
- Dyadobacter alkalitolerans (isolates:2; rSTs:1)
- Dyadobacter arcticus (isolates:1; rSTs:1)
- Dyadobacter beijingensis (isolates:2; rSTs:1)
- Dyadobacter bucti (isolates:1; rSTs:1)
- Dyadobacter chenhuakuii (isolates:3; rSTs:2)
- Dyadobacter chenwenxiniae (isolates:3; rSTs:3 tree)
- Dyadobacter crusticola (isolates:1; rSTs:1)
- Dyadobacter diqingensis (isolates:1)
- Dyadobacter endophyticus (isolates:1; rSTs:1)
- Dyadobacter fanqingshengii (isolates:3; rSTs:2)
- Dyadobacter fermentans (isolates:1; rSTs:1)
- Dyadobacter flavalbus (isolates:1; rSTs:1)
- Dyadobacter frigoris (isolates:2; rSTs:1)
- Dyadobacter jejuensis (isolates:1; rSTs:1)
- Dyadobacter jiangsuensis (isolates:1; rSTs:1)
- Dyadobacter koreensis (isolates:1; rSTs:1)
- Dyadobacter luteus (isolates:1; rSTs:1)
- Dyadobacter luticola (isolates:1; rSTs:1)
- Dyadobacter pollutisoli (isolates:2; rSTs:1)
- Dyadobacter psychrophilus (isolates:1; rSTs:1)
- Dyadobacter psychrotolerans (isolates:1; rSTs:1)
- Dyadobacter sandarakinus (isolates:1; rSTs:1)
- Dyadobacter sediminis (isolates:2; rSTs:1)
- Dyadobacter soli (isolates:1; rSTs:1)
- Dyadobacter sp. (isolates:22; rSTs:20 tree)
- Dyadobacter subterraneus (isolates:1; rSTs:1)
- Dyadobacter tibetensis (isolates:1; rSTs:1)
- Emticicia (isolates:9; rSTs:9 tree)
- Fibrella (isolates:4; rSTs:4 tree)
- Fibrisoma (isolates:2; rSTs:2)
- Fibrivirga (isolates:1; rSTs:1)
- Fibrivirga algicola (isolates:1; rSTs:1)
- Flectobacillus (isolates:7; rSTs:7 tree)
- Jiulongibacter (isolates:2; rSTs:1)
- Jiulongibacter sediminis (isolates:2; rSTs:1)
- Larkinella (isolates:10; rSTs:10 tree)
- Larkinella arboricola (isolates:1; rSTs:1)
- Larkinella humicola (isolates:1; rSTs:1)
- Larkinella insperata (isolates:1; rSTs:1)
- Larkinella knui (isolates:1; rSTs:1)
- Larkinella punicea (isolates:1; rSTs:1)
- Larkinella rosea (isolates:1; rSTs:1)
- Larkinella soli (isolates:1; rSTs:1)
- Larkinella sp. (isolates:2; rSTs:2)
- Larkinella terrae (isolates:1; rSTs:1)
- Leadbetterella (isolates:1; rSTs:1)
- Leadbetterella byssophila (isolates:1; rSTs:1)
- Marinilongibacter (isolates:1; rSTs:1)
- Marinilongibacter aquaticus (isolates:1; rSTs:1)
- Persicitalea (isolates:1; rSTs:1)
- Persicitalea jodogahamensis (isolates:1; rSTs:1)
- Pseudarcicella (isolates:1; rSTs:1)
- Pseudarcicella hirudinis (isolates:1; rSTs:1)
- Runella (isolates:10; rSTs:10 tree)
- Runella aurantiaca (isolates:1; rSTs:1)
- Runella defluvii (isolates:1; rSTs:1)
- Runella limosa (isolates:1; rSTs:1)
- Runella rosea (isolates:1; rSTs:1)
- Runella salmonicolor (isolates:1; rSTs:1)
- Runella slithyformis (isolates:1; rSTs:1)
- Runella sp. (isolates:3; rSTs:3 tree)
- Runella zeae (isolates:1; rSTs:1)
- Sandaracinomonas (isolates:1; rSTs:1)
- Sandaracinomonas limnophila (isolates:1; rSTs:1)
- Telluribacter (isolates:2; rSTs:2)
- Tellurirhabdus (isolates:1; rSTs:1)
- Tellurirhabdus rosea (isolates:1; rSTs:1)
- Aquirufa (isolates:22; rSTs:20)
- Thermoflexibacteraceae (isolates:2; rSTs:2)
- Thermonemataceae (isolates:2; rSTs:2)
- Amoebophilaceae (isolates:13; rSTs:12 tree)
- Cytophagales (isolates:680; rSTs:597 tree)
- Flavobacteriia (isolates:3961; rSTs:2488)
- Flavobacteriales (isolates:3961; rSTs:2488)
- Blattabacteriaceae (isolates:23; rSTs:21 tree)
- Crocinitomicaceae (isolates:13; rSTs:13 tree)
- Brumimicrobium (isolates:5; rSTs:5 tree)
- Crocinitomix (isolates:2; rSTs:2)
- Fluviicola (isolates:2; rSTs:2)
- Lishizhenia (isolates:1; rSTs:1)
- Lishizhenia tianjinensis (isolates:1; rSTs:1)
- Paracrocinitomix (isolates:1; rSTs:1)
- Paracrocinitomix mangrovi (isolates:1; rSTs:1)
- Putridiphycobacter (isolates:1; rSTs:1)
- Putridiphycobacter roseus (isolates:1; rSTs:1)
- Taishania (isolates:1; rSTs:1)
- Taishania pollutisoli (isolates:1; rSTs:1)
- Cryomorphaceae (isolates:3; rSTs:1)
- Flavobacteriaceae (isolates:2377; rSTs:1700)
- Abyssalbus (isolates:1; rSTs:1)
- Abyssalbus ytuae (isolates:1; rSTs:1)
- Aegicerativicinus (isolates:1; rSTs:1)
- Aegicerativicinus sediminis (isolates:1; rSTs:1)
- Aequorivita (isolates:31; rSTs:25 tree)
- Aequorivita antarctica (isolates:2; rSTs:2)
- Aequorivita aquimaris (isolates:1; rSTs:1)
- Aequorivita aurantiaca (isolates:1; rSTs:1)
- Aequorivita capsosiphonis (isolates:1; rSTs:1)
- Aequorivita echinoideorum (isolates:1; rSTs:1)
- Aequorivita iocasae (isolates:1; rSTs:1)
- Aequorivita lipolytica (isolates:2; rSTs:1)
- Aequorivita sinensis (isolates:4; rSTs:4 tree)
- Aequorivita soesokkakensis (isolates:1; rSTs:1)
- Aequorivita sp. (isolates:8; rSTs:6 tree)
- Aequorivita sublithincola (isolates:3; rSTs:1)
- Aequorivita todarodis (isolates:1; rSTs:1)
- Aequorivita viscosa (isolates:2; rSTs:1)
- Aequorivita vitellina (isolates:1; rSTs:1)
- Aequorivita vladivostokensis (isolates:1; rSTs:1)
- Aequorivita xiaoshiensis (isolates:1; rSTs:1)
- Aestuariibaculum (isolates:7; rSTs:6 tree)
- Aestuariivivens (isolates:8; rSTs:8 tree)
- Aggregatimonas (isolates:1; rSTs:1)
- Aggregatimonas sangjinii (isolates:1; rSTs:1)
- Algibacter (isolates:23; rSTs:18 tree)
- Algibacter amylolyticus (isolates:3; rSTs:1)
- Algibacter lectus (isolates:7; rSTs:5 tree)
- Algibacter luteus (isolates:3; rSTs:2)
- Algibacter marinivivus (isolates:1; rSTs:1)
- Algibacter mikhailovii (isolates:2; rSTs:2)
- Algibacter miyuki (isolates:1; rSTs:1)
- Algibacter onchidii (isolates:1; rSTs:1)
- Algibacter pacificus (isolates:1; rSTs:1)
- Algibacter pectinivorans (isolates:1; rSTs:1)
- Algibacter sp. (isolates:3; rSTs:3 tree)
- Allomuricauda (isolates:1; rSTs:1 tree)
- [Muricauda] lutisoli (isolates:1; rSTs:1)
- Altibacter (isolates:1; rSTs:1)
- Altibacter lentus (isolates:1; rSTs:1)
- Amniculibacterium (isolates:2; rSTs:2)
- Antarcticibacterium (isolates:4; rSTs:3 tree)
- Aquaticitalea (isolates:1; rSTs:1)
- Aquaticitalea lipolytica (isolates:1; rSTs:1)
- Aquimarina (isolates:65; rSTs:46 tree)
- Aquimarina acroporae (isolates:1; rSTs:1)
- Aquimarina agarilytica (isolates:1; rSTs:1)
- Aquimarina agarivorans (isolates:1; rSTs:1)
- Aquimarina aggregata (isolates:3; rSTs:2)
- Aquimarina algicola (isolates:1; rSTs:1)
- Aquimarina algiphila (isolates:9; rSTs:5 tree)
- Aquimarina amphilecti (isolates:1; rSTs:1)
- Aquimarina aquimarini (isolates:2)
- Aquimarina atlantica (isolates:1; rSTs:1)
- Aquimarina brevivitae (isolates:1; rSTs:1)
- Aquimarina gracilis (isolates:1; rSTs:1)
- Aquimarina intermedia (isolates:1; rSTs:1)
- Aquimarina latercula (isolates:1; rSTs:1)
- Aquimarina litoralis (isolates:1)
- Aquimarina longa (isolates:1; rSTs:1)
- Aquimarina macrocephali (isolates:1; rSTs:1)
- Aquimarina megaterium (isolates:2; rSTs:2)
- Aquimarina muelleri (isolates:3; rSTs:1)
- Aquimarina mytili (isolates:1; rSTs:1)
- Aquimarina pacifica (isolates:1; rSTs:1)
- Aquimarina sediminis (isolates:1; rSTs:1)
- Aquimarina sp. (isolates:26; rSTs:20 tree)
- Aquimarina spinulae (isolates:3)
- Aquimarina spongiae (isolates:1; rSTs:1)
- Arenibacter (isolates:29; rSTs:25 tree)
- Arenibacter algicola (isolates:2; rSTs:2)
- Arenibacter amylolyticus (isolates:1; rSTs:1)
- Arenibacter aquaticus (isolates:1; rSTs:1)
- Arenibacter arenosicollis (isolates:1; rSTs:1)
- Arenibacter catalasegens (isolates:1; rSTs:1)
- Arenibacter certesii (isolates:2; rSTs:1)
- Arenibacter echinorum (isolates:1; rSTs:1)
- Arenibacter hampyeongensis (isolates:1; rSTs:1)
- Arenibacter lacus (isolates:1; rSTs:1)
- Arenibacter latericius (isolates:1; rSTs:1)
- Arenibacter nanhaiticus (isolates:1; rSTs:1)
- Arenibacter palladensis (isolates:3; rSTs:3)
- Arenibacter sp. (isolates:12; rSTs:9 tree)
- Arenibacter troitsensis (isolates:1; rSTs:1)
- Aurantibacter (isolates:2; rSTs:2)
- Aureibaculum (isolates:5; rSTs:1)
- Aureicoccus (isolates:1; rSTs:1)
- Aureicoccus marinus (isolates:1; rSTs:1)
- Aureisphaera (isolates:1; rSTs:1)
- Aureisphaera galaxeae (isolates:1; rSTs:1)
- Aureitalea (isolates:1; rSTs:1)
- Aureitalea marina (isolates:1; rSTs:1)
- Aureivirga (isolates:2; rSTs:2)
- Avrilella (isolates:1; rSTs:1)
- Avrilella dinanensis (isolates:1; rSTs:1)
- Bizionia (isolates:10; rSTs:9 tree)
- Bizionia algoritergicola (isolates:1; rSTs:1)
- Bizionia arctica (isolates:1; rSTs:1)
- Bizionia argentinensis (isolates:1; rSTs:1)
- Bizionia echini (isolates:1; rSTs:1)
- Bizionia gelidisalsuginis (isolates:1; rSTs:1)
- Bizionia myxarmorum (isolates:1; rSTs:1)
- Bizionia paragorgiae (isolates:1; rSTs:1)
- Bizionia saleffrena (isolates:1; rSTs:1)
- Bizionia sp. (isolates:2; rSTs:1)
- Candidatus Arcticimaribacter (isolates:5; rSTs:1)
- Capnocytophaga (isolates:106; rSTs:83 tree)
- Capnocytophaga bilenii (isolates:1; rSTs:1)
- Capnocytophaga canimorsus (isolates:18; rSTs:12 tree)
- Capnocytophaga canis (isolates:9; rSTs:8 tree)
- Capnocytophaga catalasegens (isolates:3; rSTs:1)
- Capnocytophaga cynodegmi (isolates:8; rSTs:5 tree)
- Capnocytophaga endodontalis (isolates:1; rSTs:1)
- Capnocytophaga felis (isolates:2; rSTs:2)
- Capnocytophaga genosp. AHN8471 (isolates:5; rSTs:4 tree)
- Capnocytophaga gingivalis (isolates:4; rSTs:4 tree)
- Capnocytophaga granulosa (isolates:3; rSTs:1)
- Capnocytophaga haemolytica (isolates:3; rSTs:1)
- Capnocytophaga leadbetteri (isolates:2; rSTs:2)
- Capnocytophaga ochracea (isolates:14; rSTs:11 tree)
- Capnocytophaga periodontitidis (isolates:2; rSTs:2)
- Capnocytophaga sp. (isolates:20; rSTs:19 tree)
- Capnocytophaga sputigena (isolates:7; rSTs:5 tree)
- Capnocytophaga stomatis (isolates:4; rSTs:4 tree)
- Cellulophaga (isolates:36; rSTs:33 tree)
- Cellulophaga algicola (isolates:1; rSTs:1)
- Cellulophaga baltica (isolates:11; rSTs:12 tree)
- Cellulophaga fucicola (isolates:1; rSTs:1)
- Cellulophaga geojensis (isolates:1; rSTs:1)
- Cellulophaga lytica (isolates:4; rSTs:3 tree)
- Cellulophaga omnivescoria (isolates:2; rSTs:2)
- Cellulophaga sp. (isolates:15; rSTs:12 tree)
- Cellulophaga tyrosinoxydans (isolates:1; rSTs:1)
- Cerina (isolates:1)
- Cerina litoralis (isolates:1)
- Changchengzhania (isolates:1; rSTs:1)
- Changchengzhania lutea (isolates:1; rSTs:1)
- Christiangramia (isolates:23; rSTs:21 tree)
- Christiangramia echinicola (isolates:2; rSTs:2)
- Christiangramia flava (isolates:2; rSTs:1)
- Christiangramia forsetii (isolates:2; rSTs:1)
- Christiangramia fulva (isolates:1; rSTs:1)
- Christiangramia gaetbulicola (isolates:1; rSTs:1)
- Christiangramia lutea (isolates:1; rSTs:1)
- Christiangramia portivictoriae (isolates:1; rSTs:1)
- Christiangramia sabulilitoris (isolates:1; rSTs:1)
- Christiangramia salexigens (isolates:1; rSTs:1)
- Christiangramia sediminis (isolates:1; rSTs:1)
- Christiangramia sp. (isolates:2; rSTs:2)
- Gramella crocea (isolates:1; rSTs:1)
- Gramella jeungdoensis (isolates:1; rSTs:1)
- Gramella oceanisediminis (isolates:1; rSTs:1)
- Gramella sp. (isolates:5; rSTs:5 tree)
- Cochleicola (isolates:1; rSTs:1)
- Cochleicola gelatinilyticus (isolates:1; rSTs:1)
- Confluentibacter (isolates:4; rSTs:4 tree)
- Constantimarinum (isolates:1; rSTs:1)
- Constantimarinum furrinae (isolates:1; rSTs:1)
- Costertonia (isolates:1; rSTs:1)
- Costertonia aggregata (isolates:1; rSTs:1)
- Croceibacter (isolates:3; rSTs:3)
- Croceibacter atlanticus (isolates:3; rSTs:3)
- Croceitalea (isolates:1; rSTs:1)
- Croceitalea dokdonensis (isolates:1; rSTs:1)
- Croceivirga (isolates:6; rSTs:4 tree)
- Dokdonia (isolates:11; rSTs:9 tree)
- Eudoraea (isolates:2; rSTs:2)
- Euzebyella (isolates:3; rSTs:2)
- Flagellimonas (isolates:76; rSTs:17)
- Flagellimonas abyssi (isolates:1)
- Flagellimonas aequoris (isolates:2)
- Flagellimonas algicola (isolates:1)
- Flagellimonas allohymeniacidonis (isolates:1)
- Flagellimonas alvinocaridis (isolates:1)
- Flagellimonas amoyensis (isolates:1)
- Flagellimonas amphidinii (isolates:1)
- Flagellimonas aquimarina (isolates:1)
- Flagellimonas aurea (isolates:1)
- Flagellimonas beolgyonensis (isolates:1)
- Flagellimonas chongwuensis (isolates:1)
- Flagellimonas eckloniae (isolates:1)
- Flagellimonas flava (isolates:1)
- Flagellimonas hadalis (isolates:1)
- Flagellimonas hymeniacidonis (isolates:1; rSTs:1)
- Flagellimonas lutaonensis (isolates:1)
- Flagellimonas lutimaris (isolates:1)
- Flagellimonas marinaquae (isolates:1)
- Flagellimonas maritima (isolates:1)
- Flagellimonas meishanensis (isolates:1)
- Flagellimonas meridianipacifica (isolates:1)
- Flagellimonas myxillae (isolates:1)
- Flagellimonas nanhaiensis (isolates:1)
- Flagellimonas oceanensis (isolates:1)
- Flagellimonas oceani (isolates:2)
- Flagellimonas ochracea (isolates:1)
- Flagellimonas okinawensis (isolates:1)
- Flagellimonas olearia (isolates:2)
- Flagellimonas onchidii (isolates:1)
- Flagellimonas pacifica (isolates:1)
- Flagellimonas pelagia (isolates:2)
- Flagellimonas profundi (isolates:1)
- Flagellimonas ruestringensis (isolates:1)
- Flagellimonas sediminis (isolates:1)
- Flagellimonas spongiicola (isolates:1)
- Flagellimonas taeanensis (isolates:3)
- Flagellimonas yonaguniensis (isolates:1)
- Flagellimonas zhangzhouensis (isolates:2)
- Muricauda brasiliensis (isolates:1; rSTs:1)
- Muricauda sp. (isolates:30; rSTs:15)
- Flavicella (isolates:2; rSTs:2)
- Flavimarina (isolates:1; rSTs:1)
- Flavimarina sp. (isolates:1; rSTs:1)
- Flaviramulus (isolates:3; rSTs:3 tree)
- Flavivirga (isolates:9; rSTs:10 tree)
- Flavivirga algicola (isolates:1; rSTs:1)
- Flavivirga amylovorans (isolates:1; rSTs:1)
- Flavivirga aquatica (isolates:1; rSTs:1)
- Flavivirga aquimarina (isolates:1; rSTs:1)
- Flavivirga eckloniae (isolates:1; rSTs:1)
- Flavivirga jejuensis (isolates:1; rSTs:1)
- Flavivirga rizhaonensis (isolates:1; rSTs:1)
- Flavivirga sp. (isolates:1; rSTs:3 tree)
- Flavivirga spongiicola (isolates:1)
- Flavobacterium (isolates:862; rSTs:552 tree)
- Flavobacterium aciduliphilum (isolates:1; rSTs:1)
- Flavobacterium aestivum (isolates:1; rSTs:1)
- Flavobacterium agri (isolates:2; rSTs:1)
- Flavobacterium agricola (isolates:1; rSTs:1)
- Flavobacterium agrisoli (isolates:1; rSTs:1)
- Flavobacterium ajazii (isolates:1; rSTs:1)
- Flavobacterium akiainvivens (isolates:2; rSTs:1)
- Flavobacterium album (isolates:1; rSTs:1)
- Flavobacterium algicola (isolates:1; rSTs:1)
- Flavobacterium algoritolerans (isolates:1; rSTs:1)
- Flavobacterium alkalisoli (isolates:1; rSTs:1)
- Flavobacterium alvei (isolates:1; rSTs:1)
- Flavobacterium ammonificans (isolates:2; rSTs:2)
- Flavobacterium ammoniigenes (isolates:1; rSTs:1)
- Flavobacterium amnicola (isolates:1; rSTs:1)
- Flavobacterium amniphilum (isolates:1; rSTs:1)
- Flavobacterium anhuiense (isolates:5; rSTs:5 tree)
- Flavobacterium antarcticum (isolates:1; rSTs:1)
- Flavobacterium aquariorum (isolates:1; rSTs:1)
- Flavobacterium aquaticum (isolates:1; rSTs:1)
- Flavobacterium aquatile (isolates:3; rSTs:1)
- Flavobacterium aquicola (isolates:1; rSTs:1)
- Flavobacterium aquidurense (isolates:1; rSTs:1)
- Flavobacterium aquiphilum (isolates:1; rSTs:1)
- Flavobacterium araucananum (isolates:2; rSTs:1)
- Flavobacterium arcticum (isolates:2; rSTs:1)
- Flavobacterium arsenatis (isolates:1; rSTs:1)
- Flavobacterium aurantiibacter (isolates:1; rSTs:1)
- Flavobacterium azizsancarii (isolates:1; rSTs:1)
- Flavobacterium azooxidireducens (isolates:1; rSTs:1)
- Flavobacterium beibuense (isolates:1; rSTs:1)
- Flavobacterium bernardetii (isolates:2; rSTs:1)
- Flavobacterium bizetiae (isolates:4; rSTs:2)
- Flavobacterium bomense (isolates:1; rSTs:1)
- Flavobacterium branchiarum (isolates:1; rSTs:1)
- Flavobacterium branchiicola (isolates:1; rSTs:1)
- Flavobacterium branchiophilum (isolates:5; rSTs:3 tree)
- Flavobacterium buctense (isolates:1; rSTs:1)
- Flavobacterium caeni (isolates:1; rSTs:1)
- Flavobacterium caseinilyticum (isolates:1; rSTs:1)
- Flavobacterium cauense (isolates:3; rSTs:1)
- Flavobacterium celericrescens (isolates:1; rSTs:1)
- Flavobacterium cellulosilyticum (isolates:1; rSTs:1)
- Flavobacterium cerinum (isolates:1; rSTs:1)
- Flavobacterium channae (isolates:1; rSTs:1)
- Flavobacterium cheniae (isolates:2; rSTs:1)
- Flavobacterium cheongpyeongense (isolates:1; rSTs:1)
- Flavobacterium chilense (isolates:2; rSTs:1)
- Flavobacterium chungangense (isolates:2; rSTs:1)
- Flavobacterium chungbukense (isolates:1; rSTs:1)
- Flavobacterium circumlabens (isolates:2; rSTs:1)
- Flavobacterium collinsii (isolates:3; rSTs:3 tree)
- Flavobacterium columnare (isolates:40; rSTs:11 tree)
- Flavobacterium commune (isolates:1; rSTs:1)
- Flavobacterium coralii (isolates:1; rSTs:1)
- Flavobacterium covae (isolates:6; rSTs:4 tree)
- Flavobacterium crassostreae (isolates:2; rSTs:1)
- Flavobacterium croceum (isolates:1; rSTs:1)
- Flavobacterium crocinum (isolates:1; rSTs:1)
- Flavobacterium cucumis (isolates:1; rSTs:1)
- Flavobacterium cupreum (isolates:1; rSTs:1)
- Flavobacterium cutihirudinis (isolates:1; rSTs:1)
- Flavobacterium cyanobacteriorum (isolates:1; rSTs:1)
- Flavobacterium cyclinae (isolates:1; rSTs:1)
- Flavobacterium daejeonense (isolates:1; rSTs:1)
- Flavobacterium daemonense (isolates:1; rSTs:1)
- Flavobacterium dankookense (isolates:1; rSTs:1)
- Flavobacterium dauae (isolates:1; rSTs:1)
- Flavobacterium davisii (isolates:2; rSTs:2)
- Flavobacterium defluvii (isolates:1; rSTs:1)
- Flavobacterium degerlachei (isolates:1; rSTs:1)
- Flavobacterium denitrificans (isolates:1; rSTs:1)
- Flavobacterium difficile (isolates:1; rSTs:1)
- Flavobacterium eburneipallidum (isolates:1; rSTs:1)
- Flavobacterium endoglycinae (isolates:1; rSTs:1)
- Flavobacterium endophyticum (isolates:1; rSTs:1)
- Flavobacterium enshiense (isolates:3; rSTs:2)
- Flavobacterium erciyesense (isolates:1; rSTs:1)
- Flavobacterium faecale (isolates:1; rSTs:1)
- Flavobacterium filum (isolates:1; rSTs:1)
- Flavobacterium flabelliforme (isolates:1; rSTs:1)
- Flavobacterium flavigenum (isolates:1; rSTs:1)
- Flavobacterium flevense (isolates:2; rSTs:1)
- Flavobacterium fluviale (isolates:1; rSTs:1)
- Flavobacterium fluviatile (isolates:1; rSTs:1)
- Flavobacterium fluvii (isolates:1; rSTs:1)
- Flavobacterium foetidum (isolates:1; rSTs:1)
- Flavobacterium fontis (isolates:1; rSTs:1)
- Flavobacterium fragile (isolates:1)
- Flavobacterium franklandianum (isolates:2; rSTs:2)
- Flavobacterium frigidarium (isolates:1; rSTs:1)
- Flavobacterium frigidimaris (isolates:1; rSTs:1)
- Flavobacterium frigoris (isolates:1; rSTs:1)
- Flavobacterium frigoritolerans (isolates:1; rSTs:1)
- Flavobacterium fryxellicola (isolates:2; rSTs:1)
- Flavobacterium gawalongense (isolates:5; rSTs:2)
- Flavobacterium gelatinilyticum (isolates:1; rSTs:1)
- Flavobacterium gelidilacus (isolates:1; rSTs:1)
- Flavobacterium geliluteum (isolates:1; rSTs:1)
- Flavobacterium gillisiae (isolates:1; rSTs:1)
- Flavobacterium gilvum (isolates:2; rSTs:1)
- Flavobacterium ginsengisoli (isolates:1; rSTs:1)
- Flavobacterium ginsenosidimutans (isolates:1; rSTs:1)
- Flavobacterium glaciei (isolates:2; rSTs:1)
- Flavobacterium glycines (isolates:3; rSTs:1)
- Flavobacterium gossypii (isolates:1; rSTs:1)
- Flavobacterium granuli (isolates:2; rSTs:1)
- Flavobacterium gyeonganense (isolates:1; rSTs:1)
- Flavobacterium haoranii (isolates:2; rSTs:1)
- Flavobacterium hercynium (isolates:2; rSTs:1)
- Flavobacterium hibernum (isolates:3; rSTs:1)
- Flavobacterium hibisci (isolates:1; rSTs:1)
- Flavobacterium hiemivividum (isolates:1; rSTs:1)
- Flavobacterium humi (isolates:1; rSTs:1)
- Flavobacterium humidisoli (isolates:1; rSTs:1)
- Flavobacterium hungaricum (isolates:1; rSTs:1)
- Flavobacterium hydatis (isolates:2; rSTs:1)
- Flavobacterium hydrocarbonoxydans (isolates:1; rSTs:1)
- Flavobacterium hydrophilum (isolates:1; rSTs:1)
- Flavobacterium ichthyis (isolates:1; rSTs:1)
- Flavobacterium indicum (isolates:1; rSTs:1)
- Flavobacterium inviolabile (isolates:1; rSTs:1)
- Flavobacterium jejuense (isolates:1; rSTs:1)
- Flavobacterium johnsoniae (isolates:8; rSTs:4 tree)
- Flavobacterium jumunjinense (isolates:1; rSTs:1)
- Flavobacterium kayseriense (isolates:2; rSTs:1)
- Flavobacterium keumense (isolates:1; rSTs:1)
- Flavobacterium kingsejongi (isolates:1; rSTs:1)
- Flavobacterium lacisediminis (isolates:1; rSTs:1)
- Flavobacterium lacus (isolates:1; rSTs:1)
- Flavobacterium lacustre (isolates:1; rSTs:1)
- Flavobacterium laiguense (isolates:1; rSTs:1)
- Flavobacterium limi (isolates:2; rSTs:1)
- Flavobacterium limicola (isolates:1; rSTs:1)
- Flavobacterium limnophilum (isolates:1; rSTs:1)
- Flavobacterium limnosediminis (isolates:1; rSTs:1)
- Flavobacterium lindanitolerans (isolates:3; rSTs:1)
- Flavobacterium litorale (isolates:1; rSTs:1)
- Flavobacterium lotistagni (isolates:1; rSTs:1)
- Flavobacterium luminosum (isolates:1)
- Flavobacterium luteolum (isolates:1; rSTs:1)
- Flavobacterium luteum (isolates:1; rSTs:1)
- Flavobacterium lutivivi (isolates:1; rSTs:1)
- Flavobacterium macacae (isolates:1; rSTs:1)
- Flavobacterium macrobrachii (isolates:2; rSTs:1)
- Flavobacterium magnum (isolates:1; rSTs:1)
- Flavobacterium marginilacus (isolates:1; rSTs:1)
- Flavobacterium microcysteis (isolates:1; rSTs:1)
- Flavobacterium micromati (isolates:1; rSTs:1)
- Flavobacterium muglaense (isolates:2; rSTs:1)
- Flavobacterium nackdongense (isolates:1; rSTs:1)
- Flavobacterium nitratireducens (isolates:1; rSTs:1)
- Flavobacterium nitrogenifigens (isolates:3; rSTs:1)
- Flavobacterium noncentrifugens (isolates:2; rSTs:2)
- Flavobacterium notoginsengisoli (isolates:1; rSTs:1)
- Flavobacterium odoriferum (isolates:1)
- Flavobacterium okayamense (isolates:1; rSTs:1)
- Flavobacterium omnivorum (isolates:1; rSTs:1)
- Flavobacterium oncorhynchi (isolates:1; rSTs:1)
- Flavobacterium oreochromis (isolates:3; rSTs:3 tree)
- Flavobacterium orientale (isolates:1; rSTs:1)
- Flavobacterium pallidum (isolates:1; rSTs:1)
- Flavobacterium palustre (isolates:1; rSTs:1)
- Flavobacterium panacagri (isolates:1; rSTs:1)
- Flavobacterium panacis (isolates:1; rSTs:1)
- Flavobacterium panici (isolates:2; rSTs:2)
- Flavobacterium pectinovorum (isolates:3; rSTs:2)
- Flavobacterium petrolei (isolates:1; rSTs:1)
- Flavobacterium phragmitis (isolates:1; rSTs:1)
- Flavobacterium phycosphaerae (isolates:1; rSTs:1)
- Flavobacterium piscinae (isolates:1; rSTs:1)
- Flavobacterium piscis (isolates:2; rSTs:1)
- Flavobacterium plurextorum (isolates:2; rSTs:2)
- Flavobacterium pokkalii (isolates:1; rSTs:1)
- Flavobacterium potami (isolates:1; rSTs:1)
- Flavobacterium praedii (isolates:1; rSTs:1)
- Flavobacterium profundi (isolates:2; rSTs:1)
- Flavobacterium proteolyticum (isolates:1; rSTs:1)
- Flavobacterium psychrolimnae (isolates:1; rSTs:1)
- Flavobacterium psychrophilum (isolates:274; rSTs:70 tree)
- Flavobacterium psychroterrae (isolates:1; rSTs:1)
- Flavobacterium psychrotolerans (isolates:1; rSTs:1)
- Flavobacterium psychrotrophum (isolates:1; rSTs:1)
- Flavobacterium quisquiliarum (isolates:1; rSTs:1)
- Flavobacterium rakeshii (isolates:2; rSTs:2)
- Flavobacterium ranwuense (isolates:1; rSTs:1)
- Flavobacterium reichenbachii (isolates:2; rSTs:1)
- Flavobacterium resistens (isolates:2; rSTs:1)
- Flavobacterium restrictum (isolates:1; rSTs:1)
- Flavobacterium rhamnosiphilum (isolates:1; rSTs:1)
- Flavobacterium rivuli (isolates:2; rSTs:1)
- Flavobacterium saccharophilum (isolates:1; rSTs:1)
- Flavobacterium salilacus (isolates:2; rSTs:2)
- Flavobacterium saliperosum (isolates:2; rSTs:1)
- Flavobacterium salmonis (isolates:1; rSTs:1)
- Flavobacterium sandaracinum (isolates:1; rSTs:1)
- Flavobacterium sangjuense (isolates:1; rSTs:1)
- Flavobacterium sasangense (isolates:1; rSTs:1)
- Flavobacterium sedimenticola (isolates:1; rSTs:1)
- Flavobacterium sediminilitoris (isolates:1; rSTs:1)
- Flavobacterium sediminis (isolates:1; rSTs:1)
- Flavobacterium segetis (isolates:1; rSTs:1)
- Flavobacterium selenitireducens (isolates:1; rSTs:1)
- Flavobacterium seoulense (isolates:1; rSTs:1)
- Flavobacterium sharifuzzamanii (isolates:1; rSTs:1)
- Flavobacterium shii (isolates:1; rSTs:1)
- Flavobacterium silvaticum (isolates:1; rSTs:1)
- Flavobacterium silvisoli (isolates:1; rSTs:1)
- Flavobacterium sinopsychrotolerans (isolates:1; rSTs:1)
- Flavobacterium soli (isolates:1; rSTs:1)
- Flavobacterium solisilvae (isolates:1; rSTs:1)
- Flavobacterium soyae (isolates:1; rSTs:1)
- Flavobacterium soyangense (isolates:1; rSTs:1)
- Flavobacterium sp. (isolates:211; rSTs:198 tree)
- Flavobacterium stagni (isolates:1; rSTs:1)
- Flavobacterium suaedae (isolates:1; rSTs:1)
- Flavobacterium subsaxonicum (isolates:2; rSTs:1)
- Flavobacterium succinicans (isolates:3; rSTs:1)
- Flavobacterium sufflavum (isolates:1; rSTs:1)
- Flavobacterium suncheonense (isolates:2; rSTs:1)
- Flavobacterium supellecticarium (isolates:1; rSTs:1)
- Flavobacterium swingsii (isolates:1; rSTs:1)
- Flavobacterium tagetis (isolates:1; rSTs:1)
- Flavobacterium taihuense (isolates:1; rSTs:1)
- Flavobacterium tegetincola (isolates:1; rSTs:1)
- Flavobacterium terrae (isolates:1; rSTs:1)
- Flavobacterium terrigena (isolates:1; rSTs:1)
- Flavobacterium tiangeerense (isolates:1; rSTs:1)
- Flavobacterium tibetense (isolates:1; rSTs:1)
- Flavobacterium tistrianum (isolates:1; rSTs:1)
- Flavobacterium tructae (isolates:4; rSTs:3 tree)
- Flavobacterium turcicum (isolates:2; rSTs:1)
- Flavobacterium tyrosinilyticum (isolates:1; rSTs:1)
- Flavobacterium undicola (isolates:1; rSTs:1)
- Flavobacterium urocaniciphilum (isolates:1; rSTs:1)
- Flavobacterium urumqiense (isolates:1; rSTs:1)
- Flavobacterium ustbae (isolates:1; rSTs:1)
- Flavobacterium weaverense (isolates:1; rSTs:1)
- Flavobacterium xanthum (isolates:1; rSTs:1)
- Flavobacterium xinjiangense (isolates:1; rSTs:1)
- Flavobacterium xueshanense (isolates:1; rSTs:1)
- Flavobacterium yafengii (isolates:5; rSTs:5 tree)
- Flavobacterium zepuense (isolates:1; rSTs:1)
- Flavobacterium zhairuonense (isolates:1; rSTs:1)
- [Flexibacter] sp. ATCC 35103 (isolates:1; rSTs:1)
- Formosa (isolates:10; rSTs:9 tree)
- Gaetbulibacter (isolates:1; rSTs:1)
- Gaetbulibacter saemankumensis (isolates:1; rSTs:1)
- Galbibacter (isolates:10; rSTs:8 tree)
- Gelidibacter (isolates:11; rSTs:10 tree)
- Gelidibacter algens (isolates:2; rSTs:1)
- Gelidibacter gilvus (isolates:1; rSTs:1)
- Gelidibacter japonicus (isolates:2; rSTs:2)
- Gelidibacter maritimus (isolates:1; rSTs:1)
- Gelidibacter mesophilus (isolates:1; rSTs:1)
- Gelidibacter pelagius (isolates:1; rSTs:1)
- Gelidibacter salicanalis (isolates:2; rSTs:2)
- Gelidibacter sediminis (isolates:1; rSTs:1)
- Gillisia (isolates:10; rSTs:10 tree)
- Gilvibacter (isolates:2; rSTs:2)
- Haloflavibacter (isolates:1; rSTs:1)
- Haloflavibacter putidus (isolates:1; rSTs:1)
- Halomarinibacterium (isolates:1; rSTs:1)
- Halomarinibacterium sedimenti (isolates:1; rSTs:1)
- Hanstruepera (isolates:5; rSTs:5 tree)
- Hwangdonia (isolates:2; rSTs:1)
- Hyunsoonleella (isolates:7; rSTs:6 tree)
- Ichthyenterobacterium (isolates:2; rSTs:2)
- Imtechella (isolates:2; rSTs:1)
- Imtechella halotolerans (isolates:2; rSTs:1)
- Jejuia (isolates:4; rSTs:3 tree)
- Joostella (isolates:1; rSTs:1)
- Joostella atrarenae (isolates:1; rSTs:1)
- Kordia (isolates:7; rSTs:7 tree)
- Kriegella (isolates:1; rSTs:1)
- Kriegella aquimaris (isolates:1; rSTs:1)
- Lacinutrix (isolates:14; rSTs:14 tree)
- Lacinutrix algicola (isolates:1; rSTs:1)
- Lacinutrix himadriensis (isolates:1; rSTs:1)
- Lacinutrix iliipiscaria (isolates:1; rSTs:1)
- Lacinutrix jangbogonensis (isolates:1; rSTs:1)
- Lacinutrix mariniflava (isolates:1; rSTs:1)
- Lacinutrix neustonica (isolates:1; rSTs:1)
- Lacinutrix sp. (isolates:6; rSTs:6 tree)
- Lacinutrix venerupis (isolates:2; rSTs:2)
- Leeuwenhoekiella (isolates:15; rSTs:13 tree)
- Leeuwenhoekiella aequorea (isolates:1; rSTs:1)
- Leeuwenhoekiella aestuarii (isolates:2; rSTs:2)
- Leeuwenhoekiella blandensis (isolates:1; rSTs:1)
- Leeuwenhoekiella marinoflava (isolates:2; rSTs:1)
- Leeuwenhoekiella nanhaiensis (isolates:1; rSTs:1)
- Leeuwenhoekiella palythoae (isolates:3; rSTs:2)
- Leeuwenhoekiella parthenopeia (isolates:1; rSTs:1)
- Leeuwenhoekiella polynyae (isolates:1; rSTs:1)
- Leeuwenhoekiella sp. (isolates:3; rSTs:3 tree)
- Lentiprolixibacter (isolates:1; rSTs:1)
- Lentiprolixibacter aurantiacus (isolates:1; rSTs:1)
- Leptobacterium (isolates:1; rSTs:1)
- Leptobacterium flavescens (isolates:1; rSTs:1)
- Luteirhabdus (isolates:1; rSTs:1)
- Luteirhabdus pelagi (isolates:1; rSTs:1)
- Lutibacter (isolates:15; rSTs:13 tree)
- Lutibacter agarilyticus (isolates:1; rSTs:1)
- Lutibacter citreus (isolates:1; rSTs:1)
- Lutibacter flavus (isolates:1; rSTs:1)
- Lutibacter litoralis (isolates:1; rSTs:1)
- Lutibacter maritimus (isolates:1; rSTs:1)
- Lutibacter oceani (isolates:2; rSTs:1)
- Lutibacter oricola (isolates:1; rSTs:1)
- Lutibacter profundi (isolates:1; rSTs:1)
- Lutibacter sp. (isolates:6; rSTs:5 tree)
- Lutimonas (isolates:3; rSTs:3 tree)
- Mangrovimonas (isolates:11; rSTs:9 tree)
- Maribacter (isolates:61; rSTs:56 tree)
- Maribacter aestuarii (isolates:1; rSTs:1)
- Maribacter algarum (isolates:1; rSTs:1)
- Maribacter algicola (isolates:1; rSTs:1)
- Maribacter antarcticus (isolates:1; rSTs:1)
- Maribacter aquimaris (isolates:1; rSTs:1)
- Maribacter aquivivus (isolates:4; rSTs:4 tree)
- Maribacter arcticus (isolates:1; rSTs:1)
- Maribacter arenosus (isolates:1; rSTs:1)
- Maribacter aurantiacus (isolates:1; rSTs:1)
- Maribacter caenipelagi (isolates:1; rSTs:1)
- Maribacter cobaltidurans (isolates:3; rSTs:1)
- Maribacter dokdonensis (isolates:7; rSTs:7 tree)
- Maribacter flavus (isolates:2; rSTs:1)
- Maribacter forsetii (isolates:1; rSTs:1)
- Maribacter huludaoensis (isolates:1; rSTs:1)
- Maribacter hydrothermalis (isolates:2; rSTs:1)
- Maribacter litopenaei (isolates:1)
- Maribacter litoralis (isolates:2; rSTs:2)
- Maribacter luteus (isolates:2; rSTs:2)
- Maribacter orientalis (isolates:1; rSTs:1)
- Maribacter polysaccharolyticus (isolates:1; rSTs:1)
- Maribacter polysiphoniae (isolates:2; rSTs:1)
- Maribacter sedimenticola (isolates:1; rSTs:1)
- Maribacter sp. (isolates:14; rSTs:15 tree)
- Maribacter spongiicola (isolates:1; rSTs:1)
- Maribacter stanieri (isolates:3; rSTs:3 tree)
- Maribacter thermophilus (isolates:1; rSTs:1)
- Maribacter ulvicola (isolates:1; rSTs:1)
- Maribacter vaceletii (isolates:1; rSTs:1)
- Maribacter zhoushanensis (isolates:1; rSTs:1)
- Mariniflexile (isolates:6; rSTs:6 tree)
- Marinirhabdus (isolates:1; rSTs:1)
- Marinirhabdus gelatinilytica (isolates:1; rSTs:1)
- Marixanthomonas (isolates:3; rSTs:3 tree)
- Marixanthotalea (isolates:1)
- Marixanthotalea marina (isolates:1)
- Meridianimaribacter (isolates:2; rSTs:2)
- Mesoflavibacter (isolates:10; rSTs:8 tree)
- Mesohalobacter (isolates:1; rSTs:1)
- Mesohalobacter halotolerans (isolates:1; rSTs:1)
- Mesonia (isolates:14; rSTs:13 tree)
- Mesonia aestuariivivens (isolates:1; rSTs:1)
- Mesonia algae (isolates:1; rSTs:1)
- Mesonia aquimarina (isolates:1; rSTs:1)
- Mesonia hippocampi (isolates:1; rSTs:1)
- Mesonia maritima (isolates:1; rSTs:1)
- Mesonia mobilis (isolates:2; rSTs:1)
- Mesonia oceanica (isolates:1; rSTs:1)
- Mesonia ostreae (isolates:1; rSTs:1)
- Mesonia phycicola (isolates:1; rSTs:1)
- Mesonia profundi (isolates:1)
- Mesonia sp. (isolates:3; rSTs:4 tree)
- Muriicola (isolates:4; rSTs:3 tree)
- Myroides (isolates:132; rSTs:81 tree)
- Myroides albus (isolates:2; rSTs:1)
- Myroides fluvii (isolates:1; rSTs:1)
- Myroides guanonis (isolates:1; rSTs:1)
- Myroides indicus (isolates:1; rSTs:1)
- Myroides injenensis (isolates:2; rSTs:2)
- Myroides marinus (isolates:21; rSTs:13 tree)
- Myroides odoratimimus (isolates:75; rSTs:43 tree)
- Myroides odoratus (isolates:10; rSTs:4 tree)
- Myroides oncorhynchi (isolates:1; rSTs:1)
- Myroides pelagicus (isolates:2; rSTs:2)
- Myroides phaeus (isolates:3; rSTs:3)
- Myroides profundi (isolates:2; rSTs:1)
- Myroides sp. (isolates:11; rSTs:8 tree)
- Neptunitalea (isolates:2; rSTs:2)
- Nonlabens (isolates:28; rSTs:25 tree)
- Nonlabens agnitus (isolates:1; rSTs:1)
- Nonlabens antarcticus (isolates:1; rSTs:1)
- Nonlabens arenilitoris (isolates:1; rSTs:1)
- Nonlabens dokdonensis (isolates:2; rSTs:1)
- Nonlabens marinus (isolates:1; rSTs:1)
- Nonlabens ponticola (isolates:1; rSTs:1)
- Nonlabens sp. (isolates:6; rSTs:6 tree)
- Nonlabens spongiae (isolates:1; rSTs:1)
- Nonlabens tegetincola (isolates:3; rSTs:3 tree)
- Nonlabens ulvanivorans (isolates:8; rSTs:7 tree)
- Nonlabens xiamenensis (isolates:1; rSTs:1)
- Nonlabens xylanidelens (isolates:2; rSTs:1)
- Oceanihabitans (isolates:2; rSTs:1)
- Oceanihabitans sediminis (isolates:2; rSTs:1)
- Ochrovirga (isolates:1; rSTs:1)
- Ochrovirga pacifica (isolates:1; rSTs:1)
- Olleya (isolates:17; rSTs:18 tree)
- Paenimyroides (isolates:7; rSTs:7 tree)
- Paenimyroides aestuarii (isolates:1; rSTs:1)
- Paenimyroides aquimaris (isolates:1; rSTs:1)
- Paenimyroides baculatum (isolates:1; rSTs:1)
- Paenimyroides ceti (isolates:1; rSTs:1)
- Paenimyroides tangerinum (isolates:1; rSTs:1)
- Paenimyroides ummariense (isolates:1; rSTs:1)
- Paenimyroides viscosum (isolates:1; rSTs:1)
- Pareuzebyella (isolates:2; rSTs:2)
- Pareuzebyella sediminis (isolates:2; rSTs:2)
- Patiriisocius (isolates:3; rSTs:3 tree)
- Paucihalobacter (isolates:1; rSTs:1)
- Paucihalobacter ruber (isolates:1; rSTs:1)
- Pelagihabitans (isolates:1; rSTs:1)
- Pelagihabitans pacificus (isolates:1; rSTs:1)
- Planktosalinus (isolates:1; rSTs:1)
- Planktosalinus lacus (isolates:1; rSTs:1)
- Polaribacter (isolates:68; rSTs:55 tree)
- Polaribacter aestuariivivens (isolates:1; rSTs:1)
- Polaribacter aquimarinus (isolates:1; rSTs:1)
- Polaribacter atrinae (isolates:2; rSTs:2)
- Polaribacter batillariae (isolates:1; rSTs:1)
- Polaribacter butkevichii (isolates:1; rSTs:1)
- Polaribacter cellanae (isolates:1; rSTs:1)
- Polaribacter dokdonensis (isolates:3; rSTs:1)
- Polaribacter filamentus (isolates:1; rSTs:1)
- Polaribacter gangjinensis (isolates:2; rSTs:1)
- Polaribacter glomeratus (isolates:2; rSTs:1)
- Polaribacter haliotis (isolates:2; rSTs:1)
- Polaribacter huanghezhanensis (isolates:1; rSTs:1)
- Polaribacter irgensii (isolates:1; rSTs:1)
- Polaribacter litorisediminis (isolates:1; rSTs:1)
- Polaribacter marinus (isolates:1; rSTs:1)
- Polaribacter pacificus (isolates:1; rSTs:1)
- Polaribacter pectinis (isolates:1; rSTs:1)
- Polaribacter porphyrae (isolates:2; rSTs:1)
- Polaribacter reichenbachii (isolates:4; rSTs:1)
- Polaribacter sejongensis (isolates:1; rSTs:1)
- Polaribacter septentrionalilitoris (isolates:1; rSTs:1)
- Polaribacter sp. (isolates:32; rSTs:30 tree)
- Polaribacter tangerinus (isolates:1; rSTs:1)
- Polaribacter undariae (isolates:2; rSTs:1)
- Polaribacter vadi (isolates:2; rSTs:1)
- Pontimicrobium (isolates:1; rSTs:1)
- Pontimicrobium aquaticum (isolates:1; rSTs:1)
- Poritiphilus (isolates:1; rSTs:1)
- Poritiphilus flavus (isolates:1; rSTs:1)
- Pricia (isolates:2; rSTs:2)
- Pseudalgibacter (isolates:1; rSTs:1)
- Pseudalgibacter alginicilyticus (isolates:1; rSTs:1)
- Pseudozobellia (isolates:1; rSTs:1)
- Pseudozobellia thermophila (isolates:1; rSTs:1)
- Psychroflexus (isolates:20; rSTs:20 tree)
- Psychroflexus aestuariivivens (isolates:1; rSTs:1)
- Psychroflexus aurantiacus (isolates:1; rSTs:1)
- Psychroflexus curvus (isolates:2; rSTs:2)
- Psychroflexus gondwanensis (isolates:2; rSTs:2)
- Psychroflexus halocasei (isolates:1; rSTs:1)
- Psychroflexus lacisalsi (isolates:1; rSTs:1)
- Psychroflexus longus (isolates:1; rSTs:1)
- Psychroflexus maritimus (isolates:1; rSTs:1)
- Psychroflexus montanilacus (isolates:1; rSTs:1)
- Psychroflexus planctonicus (isolates:1; rSTs:1)
- Psychroflexus salarius (isolates:1; rSTs:1)
- Psychroflexus salis (isolates:1; rSTs:1)
- Psychroflexus sediminis (isolates:1; rSTs:1)
- Psychroflexus sp. (isolates:3; rSTs:3 tree)
- Psychroflexus torquis (isolates:1; rSTs:1)
- Psychroflexus tropicus (isolates:1; rSTs:1)
- Psychroserpens (isolates:12; rSTs:12 tree)
- Psychroserpens algicola (isolates:2; rSTs:2)
- Psychroserpens burtonensis (isolates:2; rSTs:2)
- Psychroserpens damuponensis (isolates:1; rSTs:1)
- Psychroserpens jangbogonensis (isolates:1; rSTs:1)
- Psychroserpens luteolus (isolates:1; rSTs:1)
- Psychroserpens luteus (isolates:1; rSTs:1)
- Psychroserpens mesophilus (isolates:1; rSTs:1)
- Psychroserpens ponticola (isolates:1; rSTs:1)
- Psychroserpens sp. (isolates:2; rSTs:2)
- Pukyongia (isolates:1; rSTs:1)
- Pukyongia salina (isolates:1; rSTs:1)
- Pustulibacterium (isolates:1; rSTs:1)
- Pustulibacterium marinum (isolates:1; rSTs:1)
- Rasiella (isolates:1; rSTs:1)
- Rasiella rasia (isolates:1; rSTs:1)
- Robertkochia (isolates:5; rSTs:4 tree)
- Robiginitalea (isolates:8; rSTs:7 tree)
- Salegentibacter (isolates:27; rSTs:20 tree)
- Salegentibacter agarivorans (isolates:1; rSTs:1)
- Salegentibacter echinorum (isolates:1; rSTs:1)
- Salegentibacter flavus (isolates:1; rSTs:1)
- Salegentibacter holothuriorum (isolates:1; rSTs:1)
- Salegentibacter lacus (isolates:1; rSTs:1)
- Salegentibacter maritimus (isolates:2; rSTs:2)
- Salegentibacter mishustinae (isolates:6; rSTs:3 tree)
- Salegentibacter salarius (isolates:3; rSTs:1)
- Salegentibacter salegens (isolates:2; rSTs:1)
- Salegentibacter salinarum (isolates:2; rSTs:1)
- Salegentibacter sediminis (isolates:1; rSTs:1)
- Salegentibacter sp. (isolates:5; rSTs:5 tree)
- Salegentibacter tibetensis (isolates:1; rSTs:1)
- Salinimicrobium (isolates:13; rSTs:13 tree)
- Salinimicrobium catena (isolates:3; rSTs:2)
- Salinimicrobium marinum (isolates:1; rSTs:1)
- Salinimicrobium oceani (isolates:1; rSTs:1)
- Salinimicrobium profundisediminis (isolates:1; rSTs:1)
- Salinimicrobium sediminilitoris (isolates:1; rSTs:1)
- Salinimicrobium sediminis (isolates:1; rSTs:1)
- Salinimicrobium sp. (isolates:2; rSTs:3 tree)
- Salinimicrobium terrae (isolates:1; rSTs:1)
- Salinimicrobium tongyeongense (isolates:1; rSTs:1)
- Salinimicrobium xinjiangense (isolates:1; rSTs:1)
- Saonia (isolates:1; rSTs:1)
- Saonia flava (isolates:1; rSTs:1)
- Sediminibacter (isolates:1; rSTs:1)
- Sediminibacter sp. (isolates:1; rSTs:1)
- Sediminicola (isolates:1; rSTs:1)
- Sediminicola luteus (isolates:1; rSTs:1)
- Seonamhaeicola (isolates:7; rSTs:7 tree)
- Siansivirga (isolates:1; rSTs:1)
- Siansivirga zeaxanthinifaciens (isolates:1; rSTs:1)
- Sinomicrobium (isolates:7; rSTs:6 tree)
- Snuella (isolates:1; rSTs:1)
- Snuella sedimenti (isolates:1; rSTs:1)
- Spongiivirga (isolates:1; rSTs:1)
- Spongiivirga citrea (isolates:1; rSTs:1)
- Subsaxibacter (isolates:1; rSTs:1)
- Subsaxibacter sp. (isolates:1; rSTs:1)
- Subsaximicrobium (isolates:3; rSTs:1)
- Subsaximicrobium wynnwilliamsii (isolates:3; rSTs:1)
- Tamlana (isolates:15; rSTs:13 tree)
- Tamlana agarivorans (isolates:1; rSTs:1)
- Tamlana carrageenivorans (isolates:1; rSTs:1)
- Tamlana crocina (isolates:1; rSTs:1)
- Tamlana fucoidanivorans (isolates:1; rSTs:1)
- Tamlana haliotis (isolates:1; rSTs:1)
- Tamlana laminarinivorans (isolates:1; rSTs:1)
- Tamlana nanhaiensis (isolates:1; rSTs:1)
- Tamlana sargassicola (isolates:1; rSTs:1)
- Tamlana sedimentorum (isolates:1; rSTs:1)
- Tamlana sp. (isolates:6; rSTs:4 tree)
- Tenacibaculum (isolates:267; rSTs:152 tree)
- Tenacibaculum adriaticum (isolates:1; rSTs:1)
- Tenacibaculum agarivorans (isolates:1; rSTs:1)
- Tenacibaculum aiptasiae (isolates:3; rSTs:2)
- Tenacibaculum aquimarinum (isolates:2; rSTs:2)
- Tenacibaculum bernardetii (isolates:1; rSTs:1)
- Tenacibaculum caenipelagi (isolates:1; rSTs:1)
- Tenacibaculum dicentrarchi (isolates:24; rSTs:18 tree)
- Tenacibaculum discolor (isolates:4; rSTs:3 tree)
- Tenacibaculum finnmarkense (isolates:124; rSTs:42 tree)
- Tenacibaculum gallaicum (isolates:1; rSTs:1)
- Tenacibaculum haliotis (isolates:1; rSTs:1)
- Tenacibaculum holothuriorum (isolates:1; rSTs:1)
- Tenacibaculum jejuense (isolates:1; rSTs:1)
- Tenacibaculum larymnensis (isolates:1; rSTs:1)
- Tenacibaculum lutimaris (isolates:1; rSTs:1)
- Tenacibaculum maritimum (isolates:39; rSTs:26 tree)
- Tenacibaculum mesophilum (isolates:7; rSTs:5 tree)
- Tenacibaculum ovolyticum (isolates:3; rSTs:3 tree)
- Tenacibaculum pacificus (isolates:1; rSTs:1)
- Tenacibaculum pelagium (isolates:1; rSTs:1)
- Tenacibaculum piscium (isolates:17; rSTs:11 tree)
- Tenacibaculum retecalamus (isolates:1; rSTs:1)
- Tenacibaculum singaporense (isolates:2; rSTs:2)
- Tenacibaculum skagerrakense (isolates:1; rSTs:1)
- Tenacibaculum soleae (isolates:4; rSTs:4 tree)
- Tenacibaculum sp. (isolates:22; rSTs:18 tree)
- Tenacibaculum tangerinum (isolates:1; rSTs:1)
- Tenacibaculum todarodis (isolates:1; rSTs:1)
- Ulvibacter (isolates:4; rSTs:3 tree)
- Ulvibacterium (isolates:2; rSTs:2)
- Ulvibacterium marinum (isolates:2; rSTs:2)
- Urechidicola (isolates:1; rSTs:1)
- Urechidicola croceus (isolates:1; rSTs:1)
- Vaginella (isolates:1; rSTs:1)
- Vaginella massiliensis (isolates:1; rSTs:1)
- Wenyingzhuangia (isolates:7; rSTs:6 tree)
- Winogradskyella (isolates:61; rSTs:53 tree)
- Winogradskyella alexanderae (isolates:1; rSTs:1)
- Winogradskyella algicola (isolates:1; rSTs:1)
- Winogradskyella aquimaris (isolates:1; rSTs:1)
- Winogradskyella arenosi (isolates:1; rSTs:1)
- Winogradskyella aurantia (isolates:1; rSTs:1)
- Winogradskyella aurantiaca (isolates:1; rSTs:1)
- Winogradskyella bathintestinalis (isolates:1; rSTs:1)
- Winogradskyella costae (isolates:1; rSTs:1)
- Winogradskyella echinorum (isolates:2; rSTs:1)
- Winogradskyella eckloniae (isolates:1; rSTs:1)
- Winogradskyella endarachnes (isolates:1; rSTs:1)
- Winogradskyella epiphytica (isolates:2; rSTs:1)
- Winogradskyella eximia (isolates:2; rSTs:2)
- Winogradskyella flava (isolates:2; rSTs:2)
- Winogradskyella forsetii (isolates:4; rSTs:2)
- Winogradskyella haliclonae (isolates:1; rSTs:1)
- Winogradskyella helgolandensis (isolates:2; rSTs:2)
- Winogradskyella immobilis (isolates:2)
- Winogradskyella jejuensis (isolates:1; rSTs:1)
- Winogradskyella litoriviva (isolates:1; rSTs:1)
- Winogradskyella ludwigii (isolates:1; rSTs:1)
- Winogradskyella luteola (isolates:1; rSTs:1)
- Winogradskyella marina (isolates:1; rSTs:1)
- Winogradskyella ouciana (isolates:1; rSTs:1)
- Winogradskyella pacifica (isolates:2; rSTs:2)
- Winogradskyella psychrotolerans (isolates:1; rSTs:1)
- Winogradskyella schleiferi (isolates:1; rSTs:1)
- Winogradskyella sediminis (isolates:2; rSTs:2)
- Winogradskyella sp. (isolates:12; rSTs:10 tree)
- Winogradskyella tangerina (isolates:1; rSTs:1)
- Winogradskyella thalassocola (isolates:1; rSTs:1)
- Winogradskyella undariae (isolates:3; rSTs:3 tree)
- Winogradskyella ursingii (isolates:1; rSTs:1)
- Winogradskyella vidalii (isolates:1; rSTs:1)
- Winogradskyella vincentii (isolates:1; rSTs:1)
- Winogradskyella wandonensis (isolates:1; rSTs:1)
- Winogradskyella wichelsiae (isolates:1; rSTs:1)
- Wocania (isolates:2; rSTs:2)
- Xanthomarina (isolates:2; rSTs:2)
- Yeosuana (isolates:2; rSTs:2)
- Zeaxanthinibacter (isolates:2; rSTs:2)
- Zhouia (isolates:4; rSTs:4 tree)
- Zobellia (isolates:18; rSTs:18 tree)
- Zobellia alginiliquefaciens (isolates:1; rSTs:1)
- Zobellia amurskyensis (isolates:1; rSTs:1)
- Zobellia barbeyronii (isolates:1; rSTs:1)
- Zobellia galactanivorans (isolates:3; rSTs:3 tree)
- Zobellia laminariae (isolates:2; rSTs:1)
- Zobellia nedashkovskayae (isolates:2; rSTs:2)
- Zobellia roscoffensis (isolates:2; rSTs:2)
- Zobellia russellii (isolates:1; rSTs:1)
- Zobellia sp. (isolates:3; rSTs:4 tree)
- Zobellia uliginosa (isolates:2; rSTs:2)
- Zunongwangia (isolates:9; rSTs:9 tree)
- Abyssalbus (isolates:1; rSTs:1)
- Ichthyobacteriaceae (isolates:1; rSTs:1)
- Luteibaculaceae (isolates:1; rSTs:1)
- Owenweeksiaceae (isolates:2; rSTs:2)
- Parvicellaceae (isolates:1; rSTs:1)
- Phaeocystidibacteraceae (isolates:3; rSTs:2)
- Salibacteraceae (isolates:1; rSTs:1)
- Schleiferiaceae (isolates:4; rSTs:3 tree)
- Vicingaceae (isolates:1; rSTs:1)
- Weeksellaceae (isolates:1472; rSTs:738 tree)
- Algoriella (isolates:2; rSTs:2)
- Algoriella xinjiangensis (isolates:2; rSTs:2)
- Apibacter (isolates:26; rSTs:17 tree)
- Bergeyella (isolates:13; rSTs:6 tree)
- Chishuiella (isolates:2; rSTs:1)
- Chishuiella changwenlii (isolates:2; rSTs:1)
- Chryseobacterium (isolates:410; rSTs:321 tree)
- Candidatus Chryseobacterium massiliae (isolates:1; rSTs:1)
- Chryseobacterium aahli (isolates:1; rSTs:1)
- Chryseobacterium angstadtii (isolates:1; rSTs:1)
- Chryseobacterium antibioticum (isolates:1; rSTs:1)
- Chryseobacterium aquaticum (isolates:3; rSTs:3 tree)
- Chryseobacterium aquifrigidense (isolates:1; rSTs:1)
- Chryseobacterium arachidis (isolates:1; rSTs:1)
- Chryseobacterium arthrosphaerae (isolates:11; rSTs:8 tree)
- Chryseobacterium artocarpi (isolates:1; rSTs:1)
- Chryseobacterium aurantiacum (isolates:1; rSTs:1)
- Chryseobacterium aureum (isolates:1; rSTs:1)
- Chryseobacterium balustinum (isolates:3; rSTs:1)
- Chryseobacterium bernardetii (isolates:3; rSTs:3)
- Chryseobacterium binzhouense (isolates:1; rSTs:1)
- Chryseobacterium camelliae (isolates:2; rSTs:2)
- Chryseobacterium candidae (isolates:1; rSTs:1)
- Chryseobacterium capnotolerans (isolates:1; rSTs:1)
- Chryseobacterium carnipullorum (isolates:4; rSTs:2)
- Chryseobacterium caseinilyticum (isolates:1; rSTs:1)
- Chryseobacterium cheonjiense (isolates:1; rSTs:1)
- Chryseobacterium contaminans (isolates:3; rSTs:2)
- Chryseobacterium cucumeris (isolates:5; rSTs:5 tree)
- Chryseobacterium culicis (isolates:2; rSTs:2)
- Chryseobacterium daecheongense (isolates:3; rSTs:2)
- Chryseobacterium daeguense (isolates:1; rSTs:1)
- Chryseobacterium defluvii (isolates:1; rSTs:1)
- Chryseobacterium echinoideorum (isolates:1; rSTs:1)
- Chryseobacterium edaphi (isolates:1; rSTs:1)
- Chryseobacterium elymi (isolates:1; rSTs:1)
- Chryseobacterium endalhagicum (isolates:1; rSTs:1)
- Chryseobacterium faecale (isolates:2; rSTs:1)
- Chryseobacterium fistulae (isolates:1; rSTs:1)
- Chryseobacterium flavum (isolates:1; rSTs:1)
- Chryseobacterium fluminis (isolates:1)
- Chryseobacterium foetidum (isolates:1; rSTs:1)
- Chryseobacterium formosense (isolates:2; rSTs:1)
- Chryseobacterium formosus (isolates:1; rSTs:1)
- Chryseobacterium gallinarum (isolates:3; rSTs:3 tree)
- Chryseobacterium gambrini (isolates:3; rSTs:3 tree)
- Chryseobacterium geocarposphaerae (isolates:1; rSTs:1)
- Chryseobacterium gilvum (isolates:1; rSTs:1)
- Chryseobacterium ginsenosidimutans (isolates:1; rSTs:1)
- Chryseobacterium glaciei (isolates:1; rSTs:1)
- Chryseobacterium gleum (isolates:6; rSTs:4 tree)
- Chryseobacterium gregarium (isolates:1; rSTs:1)
- Chryseobacterium gwangjuense (isolates:1; rSTs:1)
- Chryseobacterium hagamense (isolates:1; rSTs:1)
- Chryseobacterium hispalense (isolates:1; rSTs:1)
- Chryseobacterium indologenes (isolates:56; rSTs:17 tree)
- Chryseobacterium indoltheticum (isolates:6; rSTs:4 tree)
- Chryseobacterium jejuense (isolates:3; rSTs:2)
- Chryseobacterium joostei (isolates:2; rSTs:1)
- Chryseobacterium kimseyorum (isolates:1; rSTs:1)
- Chryseobacterium koreense (isolates:2; rSTs:1)
- Chryseobacterium kwangjuense (isolates:1; rSTs:1)
- Chryseobacterium lactis (isolates:3; rSTs:2)
- Chryseobacterium lacus (isolates:3; rSTs:2)
- Chryseobacterium lathyri (isolates:3; rSTs:2)
- Chryseobacterium limigenitum (isolates:1; rSTs:1)
- Chryseobacterium luquanense (isolates:1; rSTs:1)
- Chryseobacterium luteum (isolates:1; rSTs:1)
- Chryseobacterium manosquense (isolates:1; rSTs:1)
- Chryseobacterium mucoviscidosis (isolates:1; rSTs:1)
- Chryseobacterium muglaense (isolates:3; rSTs:1)
- Chryseobacterium mulctrae (isolates:1; rSTs:1)
- Chryseobacterium nakagawai (isolates:2; rSTs:1)
- Chryseobacterium nematophagum (isolates:1; rSTs:1)
- Chryseobacterium nepalense (isolates:2; rSTs:1)
- Chryseobacterium oleae (isolates:1; rSTs:1)
- Chryseobacterium oncorhynchi (isolates:1; rSTs:1)
- Chryseobacterium oranimense (isolates:5; rSTs:4 tree)
- Chryseobacterium oryctis (isolates:1; rSTs:1)
- Chryseobacterium oryzae (isolates:1; rSTs:1)
- Chryseobacterium paludis (isolates:1; rSTs:1)
- Chryseobacterium panacisoli (isolates:1; rSTs:1)
- Chryseobacterium paridis (isolates:1; rSTs:1)
- Chryseobacterium pennae (isolates:1; rSTs:1)
- Chryseobacterium pennipullorum (isolates:1; rSTs:1)
- Chryseobacterium phocaeense (isolates:1; rSTs:1)
- Chryseobacterium phosphatilyticum (isolates:1; rSTs:1)
- Chryseobacterium piperi (isolates:2; rSTs:1)
- Chryseobacterium piscicola (isolates:2; rSTs:1)
- Chryseobacterium piscium (isolates:1; rSTs:1)
- Chryseobacterium polytrichastri (isolates:1; rSTs:1)
- Chryseobacterium populi (isolates:1; rSTs:1)
- Chryseobacterium potabilaquae (isolates:2; rSTs:2)
- Chryseobacterium profundimaris (isolates:1; rSTs:1)
- Chryseobacterium pyrolae (isolates:1; rSTs:1)
- Chryseobacterium rhizoplanae (isolates:1; rSTs:1)
- Chryseobacterium rhizosphaerae (isolates:6; rSTs:5 tree)
- Chryseobacterium salivictor (isolates:1; rSTs:1)
- Chryseobacterium schmidteae (isolates:1; rSTs:1)
- Chryseobacterium scophthalmum (isolates:4; rSTs:3 tree)
- Chryseobacterium sediminis (isolates:2; rSTs:2)
- Chryseobacterium shandongense (isolates:3; rSTs:3 tree)
- Chryseobacterium shigense (isolates:2; rSTs:1)
- Chryseobacterium soldanellicola (isolates:1; rSTs:1)
- Chryseobacterium soli (isolates:2; rSTs:2)
- Chryseobacterium sp. (isolates:156; rSTs:139 tree)
- Chryseobacterium suipulveris (isolates:1; rSTs:1)
- Chryseobacterium taeanense (isolates:1; rSTs:1)
- Chryseobacterium tagetis (isolates:1; rSTs:1)
- Chryseobacterium taichungense (isolates:1; rSTs:1)
- Chryseobacterium taihuense (isolates:2; rSTs:2)
- Chryseobacterium taiwanense (isolates:1; rSTs:1)
- Chryseobacterium takakiae (isolates:1; rSTs:1)
- Chryseobacterium taklimakanense (isolates:4; rSTs:4 tree)
- Chryseobacterium tructae (isolates:1)
- Chryseobacterium turcicum (isolates:1; rSTs:2)
- Chryseobacterium ureilyticum (isolates:1; rSTs:1)
- Chryseobacterium urinae (isolates:1)
- Chryseobacterium vaccae (isolates:1; rSTs:1)
- Chryseobacterium viscerum (isolates:2; rSTs:2)
- Chryseobacterium vrystaatense (isolates:2; rSTs:2)
- Chryseobacterium wanjuense (isolates:1; rSTs:1)
- Cloacibacterium (isolates:7; rSTs:6 tree)
- Cruoricaptor (isolates:2; rSTs:2)
- Cruoricaptor ignavus (isolates:2; rSTs:2)
- Elizabethkingia (isolates:627; rSTs:187 tree)
- Elizabethkingia anophelis (isolates:476; rSTs:132 tree)
- Elizabethkingia argenteiflava (isolates:1; rSTs:1)
- Elizabethkingia bruuniana (isolates:9; rSTs:5 tree)
- Elizabethkingia meningoseptica (isolates:90; rSTs:22 tree)
- Elizabethkingia miricola (isolates:26; rSTs:10 tree)
- Elizabethkingia occulta (isolates:2; rSTs:2)
- Elizabethkingia sp. (isolates:15; rSTs:8 tree)
- Elizabethkingia ursingii (isolates:8; rSTs:7 tree)
- Empedobacter (isolates:35; rSTs:29 tree)
- Epilithonimonas (isolates:22; rSTs:19 tree)
- Epilithonimonas arachidiradicis (isolates:2; rSTs:1)
- Epilithonimonas bovis (isolates:1; rSTs:1)
- Epilithonimonas caeni (isolates:1; rSTs:1)
- Epilithonimonas ginsengisoli (isolates:1; rSTs:1)
- Epilithonimonas hispanica (isolates:1; rSTs:1)
- Epilithonimonas hominis (isolates:2; rSTs:2)
- Epilithonimonas hungarica (isolates:2; rSTs:2)
- Epilithonimonas lactis (isolates:2; rSTs:1)
- Epilithonimonas mollis (isolates:1; rSTs:1)
- Epilithonimonas pallida (isolates:1; rSTs:1)
- Epilithonimonas sp. (isolates:2; rSTs:1)
- Epilithonimonas tenax (isolates:1; rSTs:1)
- Epilithonimonas vandammei (isolates:2; rSTs:2)
- Epilithonimonas xixisoli (isolates:1; rSTs:1)
- Epilithonimonas zeae (isolates:2; rSTs:2)
- Faecalibacter (isolates:4; rSTs:4 tree)
- Frigoriflavimonas (isolates:1; rSTs:1)
- Frigoriflavimonas asaccharolytica (isolates:1; rSTs:1)
- Halpernia (isolates:2; rSTs:2)
- Kaistella (isolates:27; rSTs:22 tree)
- Kaistella antarctica (isolates:3; rSTs:1)
- Kaistella carnis (isolates:1; rSTs:1)
- Kaistella chaponensis (isolates:1; rSTs:1)
- Kaistella daneshvariae (isolates:2; rSTs:2)
- Kaistella flava (ex Peng et al. 2021) (isolates:1; rSTs:1)
- Kaistella gelatinilytica (isolates:1; rSTs:1)
- Kaistella haifensis (isolates:2; rSTs:2)
- Kaistella jeonii (isolates:3; rSTs:2)
- Kaistella montana (isolates:1; rSTs:1)
- Kaistella palustris (isolates:1; rSTs:1)
- Kaistella polysaccharea (isolates:1; rSTs:1)
- Kaistella pullorum (isolates:1; rSTs:1)
- Kaistella soli (isolates:1; rSTs:1)
- Kaistella solincola (isolates:1; rSTs:1)
- Kaistella sp. (isolates:5; rSTs:3 tree)
- Kaistella treverensis (isolates:1; rSTs:1)
- Kaistella yonginensis (isolates:1; rSTs:1)
- Marnyiella (isolates:3; rSTs:2)
- Marnyiella aurantia (isolates:3; rSTs:2)
- Moheibacter (isolates:2; rSTs:2)
- Ornithobacterium (isolates:16; rSTs:12 tree)
- Profundicola (isolates:2; rSTs:2)
- Profundicola chukchiensis (isolates:2; rSTs:2)
- Riemerella (isolates:261; rSTs:94 tree)
- Soonwooa (isolates:1; rSTs:1)
- Soonwooa buanensis (isolates:1; rSTs:1)
- Weeksella (isolates:7; rSTs:6 tree)
- Algoriella (isolates:2; rSTs:2)
- Flavobacteriales (isolates:3961; rSTs:2488)
- Saprospiria (isolates:74; rSTs:41 tree)
- Saprospirales (isolates:74; rSTs:41 tree)
- Haliscomenobacteraceae (isolates:6; rSTs:5 tree)
- Lewinellaceae (isolates:19; rSTs:17 tree)
- Flavilitoribacter (isolates:1; rSTs:1)
- Flavilitoribacter nigricans (isolates:1; rSTs:1)
- Lewinella (isolates:6; rSTs:6 tree)
- Neolewinella (isolates:12; rSTs:10 tree)
- Neolewinella agarilytica (isolates:1; rSTs:1)
- Neolewinella antarctica (isolates:1; rSTs:1)
- Neolewinella aquimaris (isolates:1; rSTs:1)
- Neolewinella aurantiaca (isolates:1; rSTs:1)
- Neolewinella lacunae (isolates:2; rSTs:1)
- Neolewinella litorea (isolates:1; rSTs:1)
- Neolewinella marina (isolates:2; rSTs:1)
- Neolewinella maritima (isolates:1; rSTs:1)
- Neolewinella persica (isolates:1; rSTs:1)
- Neolewinella xylanilytica (isolates:1; rSTs:1)
- Flavilitoribacter (isolates:1; rSTs:1)
- Saprospiraceae (isolates:49; rSTs:19 tree)
- Aureispira (isolates:3; rSTs:3 tree)
- Candidatus Brachybacter (isolates:11)
- Candidatus Brachybacter algidus (isolates:11)
- Candidatus Defluviibacterium (isolates:5)
- Candidatus Defluviibacterium haderslevense (isolates:5)
- Candidatus Opimibacter (isolates:4)
- Candidatus Parvibacillus (isolates:8)
- Candidatus Parvibacillus calidus (isolates:8)
- Candidatus Vicinibacter (isolates:11; rSTs:9 tree)
- Membranihabitans (isolates:3; rSTs:3 tree)
- Saprospira (isolates:4; rSTs:4 tree)
- Saprospirales (isolates:74; rSTs:41 tree)
- Sphingobacteriia (isolates:469; rSTs:406 tree)
- Sphingobacteriales (isolates:469; rSTs:406 tree)
- Aurantibacillaceae (isolates:1; rSTs:1)
- Sphingobacteriaceae (isolates:468; rSTs:405 tree)
- Albibacterium (isolates:1; rSTs:1)
- Albibacterium bauzanense (isolates:1; rSTs:1)
- Anseongella (isolates:2)
- Anseongella ginsenosidimutans (isolates:2)
- Arcticibacter (isolates:6; rSTs:5 tree)
- Daejeonella (isolates:5; rSTs:5 tree)
- Hufsiella (isolates:2; rSTs:2)
- Mucilaginibacter (isolates:107; rSTs:97 tree)
- Mucilaginibacter achroorhodeus (isolates:1; rSTs:1)
- Mucilaginibacter agri (isolates:1; rSTs:1)
- Mucilaginibacter aquaedulcis (isolates:1; rSTs:1)
- Mucilaginibacter aquariorum (isolates:1; rSTs:1)
- Mucilaginibacter aquatilis (isolates:1; rSTs:1)
- Mucilaginibacter arboris (isolates:1; rSTs:1)
- Mucilaginibacter auburnensis (isolates:1; rSTs:1)
- Mucilaginibacter aurantiaciroseus (isolates:1; rSTs:1)
- Mucilaginibacter boryungensis (isolates:1; rSTs:1)
- Mucilaginibacter celer (isolates:1; rSTs:1)
- Mucilaginibacter conchicola (isolates:1; rSTs:1)
- Mucilaginibacter corticis (isolates:1; rSTs:1)
- Mucilaginibacter daejeonensis (isolates:1; rSTs:1)
- Mucilaginibacter dorajii (isolates:1; rSTs:1)
- Mucilaginibacter endophyticus (isolates:1; rSTs:1)
- Mucilaginibacter flavidus (isolates:1; rSTs:1)
- Mucilaginibacter flavus (isolates:1; rSTs:1)
- Mucilaginibacter frigoritolerans (isolates:1; rSTs:1)
- Mucilaginibacter galii (isolates:1; rSTs:1)
- Mucilaginibacter gilvus (isolates:1; rSTs:1)
- Mucilaginibacter ginkgonis (isolates:1; rSTs:1)
- Mucilaginibacter ginsenosidivorans (isolates:1; rSTs:1)
- Mucilaginibacter ginsenosidivorax (isolates:1; rSTs:1)
- Mucilaginibacter glaciei (isolates:1; rSTs:1)
- Mucilaginibacter gossypii (isolates:3; rSTs:3 tree)
- Mucilaginibacter gossypiicola (isolates:1; rSTs:1)
- Mucilaginibacter gotjawali (isolates:2; rSTs:1)
- Mucilaginibacter gracilis (isolates:1; rSTs:1)
- Mucilaginibacter hurinus (isolates:1; rSTs:1)
- Mucilaginibacter inviolabilis (isolates:1; rSTs:1)
- Mucilaginibacter jinjuensis (isolates:1; rSTs:1)
- Mucilaginibacter kameinonensis (isolates:1; rSTs:1)
- Mucilaginibacter lacusdianchii (isolates:1)
- Mucilaginibacter lappiensis (isolates:3; rSTs:2)
- Mucilaginibacter limnophilus (isolates:1; rSTs:1)
- Mucilaginibacter mali (isolates:1; rSTs:1)
- Mucilaginibacter mallensis (isolates:1; rSTs:1)
- Mucilaginibacter myungsuensis (isolates:2; rSTs:1)
- Mucilaginibacter oryzae (isolates:1; rSTs:1)
- Mucilaginibacter pallidiroseus (isolates:1; rSTs:1)
- Mucilaginibacter paludis (isolates:1; rSTs:1)
- Mucilaginibacter pankratovii (isolates:1; rSTs:1)
- Mucilaginibacter pedocola (isolates:1; rSTs:1)
- Mucilaginibacter phenanthrenivorans (isolates:1; rSTs:1)
- Mucilaginibacter phyllosphaerae (isolates:3; rSTs:1)
- Mucilaginibacter pineti (isolates:1; rSTs:1)
- Mucilaginibacter pocheonensis (isolates:1; rSTs:1)
- Mucilaginibacter polytrichastri (isolates:2; rSTs:1)
- Mucilaginibacter psychrotolerans (isolates:1; rSTs:1)
- Mucilaginibacter rigui (isolates:1; rSTs:1)
- Mucilaginibacter rivuli (isolates:1; rSTs:1)
- Mucilaginibacter robiniae (isolates:1; rSTs:1)
- Mucilaginibacter roseus (isolates:1; rSTs:1)
- Mucilaginibacter rubeus (isolates:1; rSTs:1)
- Mucilaginibacter sabulilitoris (isolates:1; rSTs:1)
- Mucilaginibacter segetis (isolates:1; rSTs:1)
- Mucilaginibacter sp. (isolates:36; rSTs:33 tree)
- Mucilaginibacter straminoryzae (isolates:1; rSTs:1)
- Mucilaginibacter terrae (isolates:1; rSTs:1)
- Mucilaginibacter terrenus (isolates:1; rSTs:1)
- Mucilaginibacter terrigena (isolates:1; rSTs:1)
- Mucilaginibacter xinganensis (isolates:1; rSTs:1)
- Mucilaginibacter yixingensis (isolates:1; rSTs:1)
- Nubsella (isolates:1; rSTs:1)
- Nubsella zeaxanthinifaciens (isolates:1; rSTs:1)
- Olivibacter (isolates:7; rSTs:8 tree)
- Parapedobacter (isolates:13; rSTs:11 tree)
- Parapedobacter composti (isolates:1; rSTs:1)
- Parapedobacter defluvii (isolates:1; rSTs:1)
- Parapedobacter indicus (isolates:2; rSTs:1)
- Parapedobacter koreensis (isolates:1; rSTs:1)
- Parapedobacter luteus (isolates:1; rSTs:1)
- Parapedobacter lycopersici (isolates:1; rSTs:1)
- Parapedobacter pyrenivorans (isolates:1; rSTs:1)
- Parapedobacter soli (isolates:1; rSTs:1)
- Parapedobacter sp. (isolates:2; rSTs:2)
- Parapedobacter tibetensis (isolates:2; rSTs:1)
- Pararcticibacter (isolates:1; rSTs:1)
- Pararcticibacter amylolyticus (isolates:1; rSTs:1)
- Pedobacter (isolates:165; rSTs:150 tree)
- Pedobacter africanus (isolates:1; rSTs:1)
- Pedobacter agri (isolates:4; rSTs:3 tree)
- Pedobacter alluvionis (isolates:2; rSTs:2)
- Pedobacter antarcticus (isolates:3; rSTs:2)
- Pedobacter aquae (isolates:1; rSTs:1)
- Pedobacter aquatilis (isolates:1; rSTs:1)
- Pedobacter arcticus (isolates:1; rSTs:1)
- Pedobacter borealis (isolates:1; rSTs:1)
- Pedobacter boryungensis (isolates:1; rSTs:1)
- Pedobacter caeni (isolates:1; rSTs:1)
- Pedobacter changchengzhani (isolates:1; rSTs:1)
- Pedobacter chinensis (isolates:1; rSTs:1)
- Pedobacter chitinilyticus (isolates:2; rSTs:1)
- Pedobacter cryoconitis (isolates:6; rSTs:6 tree)
- Pedobacter cryophilus (isolates:1; rSTs:1)
- Pedobacter cryotolerans (isolates:1; rSTs:1)
- Pedobacter duraquae (isolates:1; rSTs:1)
- Pedobacter endophyticus (isolates:1; rSTs:1)
- Pedobacter fastidiosus (isolates:1; rSTs:1)
- Pedobacter foliorum (isolates:1; rSTs:1)
- Pedobacter frigidisoli (isolates:1; rSTs:1)
- Pedobacter frigiditerrae (isolates:1; rSTs:1)
- Pedobacter frigoris (isolates:1; rSTs:1)
- Pedobacter gandavensis (isolates:1; rSTs:1)
- Pedobacter ghigonis (isolates:1; rSTs:1)
- Pedobacter ginsengisoli (isolates:1; rSTs:1)
- Pedobacter ginsenosidimutans (isolates:1; rSTs:1)
- Pedobacter glucosidilyticus (isolates:1; rSTs:1)
- Pedobacter hartonius (isolates:1; rSTs:1)
- Pedobacter helvus (isolates:1; rSTs:1)
- Pedobacter heparinus (isolates:2; rSTs:1)
- Pedobacter hiemivivus (isolates:2; rSTs:2)
- Pedobacter indicus (isolates:1; rSTs:1)
- Pedobacter insulae (isolates:1; rSTs:1)
- Pedobacter jejuensis (isolates:1; rSTs:1)
- Pedobacter jeongneungensis (isolates:1; rSTs:1)
- Pedobacter kyonggii (isolates:1; rSTs:1)
- Pedobacter kyungheensis (isolates:1; rSTs:1)
- Pedobacter lusitanus (isolates:1; rSTs:1)
- Pedobacter mendelii (isolates:1; rSTs:1)
- Pedobacter metabolipauper (isolates:1; rSTs:1)
- Pedobacter miscanthi (isolates:1; rSTs:1)
- Pedobacter mongoliensis (isolates:1; rSTs:1)
- Pedobacter montanisoli (isolates:1; rSTs:1)
- Pedobacter mucosus (isolates:1; rSTs:1)
- Pedobacter namyangjuensis (isolates:1; rSTs:1)
- Pedobacter nanyangensis (isolates:1; rSTs:1)
- Pedobacter nototheniae (isolates:1; rSTs:1)
- Pedobacter nutrimenti (isolates:1; rSTs:1)
- Pedobacter nyackensis (isolates:1; rSTs:1)
- Pedobacter paludis (isolates:1; rSTs:1)
- Pedobacter panaciterrae (isolates:3; rSTs:3)
- Pedobacter petrophilus (isolates:1; rSTs:1)
- Pedobacter planticolens (isolates:1; rSTs:1)
- Pedobacter polaris (isolates:1; rSTs:1)
- Pedobacter polysacchareus (isolates:1; rSTs:1)
- Pedobacter psychrodurus (isolates:1; rSTs:1)
- Pedobacter psychrophilus (isolates:1; rSTs:1)
- Pedobacter psychroterrae (isolates:1; rSTs:1)
- Pedobacter psychrotolerans (isolates:2; rSTs:1)
- Pedobacter puniceum (isolates:1; rSTs:1)
- Pedobacter quisquiliarum (isolates:1; rSTs:1)
- Pedobacter rhizosphaerae (isolates:1; rSTs:1)
- Pedobacter riviphilus (isolates:1; rSTs:1)
- Pedobacter roseus (isolates:1; rSTs:1)
- Pedobacter sandarakinus (isolates:1; rSTs:1)
- Pedobacter schmidteae (isolates:1; rSTs:1)
- Pedobacter segetis (isolates:1; rSTs:1)
- Pedobacter soli (isolates:1; rSTs:1)
- Pedobacter sp. (isolates:64; rSTs:57 tree)
- Pedobacter steynii (isolates:2; rSTs:1)
- Pedobacter suwonensis (isolates:2; rSTs:2)
- Pedobacter terrae (isolates:2; rSTs:2)
- Pedobacter ureilyticus (isolates:1; rSTs:1)
- Pedobacter westerhofensis (isolates:1; rSTs:1)
- Pedobacter xinjiangensis (isolates:1; rSTs:1)
- Pedobacter xixiisoli (isolates:2; rSTs:1)
- Pedobacter yonginense (isolates:1; rSTs:1)
- Pedobacter yulinensis (isolates:1; rSTs:1)
- Pedobacter zeae (isolates:2; rSTs:1)
- Pelobium (isolates:1; rSTs:1)
- Pelobium manganitolerans (isolates:1; rSTs:1)
- Pseudopedobacter (isolates:1; rSTs:1)
- Pseudopedobacter saltans (isolates:1; rSTs:1)
- Solitalea (isolates:5; rSTs:5 tree)
- Sphingobacterium (isolates:151; rSTs:117 tree)
- Sphingobacterium alimentarium (isolates:1; rSTs:1)
- Sphingobacterium alkalisoli (isolates:2; rSTs:1)
- Sphingobacterium arenae (isolates:1; rSTs:1)
- Sphingobacterium athyrii (isolates:1; rSTs:1)
- Sphingobacterium bambusae (isolates:1; rSTs:1)
- Sphingobacterium bovisgrunnientis (isolates:1; rSTs:1)
- Sphingobacterium bovistauri (isolates:1; rSTs:1)
- Sphingobacterium cavernae (isolates:1; rSTs:1)
- Sphingobacterium cellulitidis (isolates:1; rSTs:1)
- Sphingobacterium chungjuense (isolates:1; rSTs:1)
- Sphingobacterium chuzhouense (isolates:1; rSTs:1)
- Sphingobacterium composti Ten et al. 2007 non Yoo et al. 2007 (isolates:1; rSTs:1)
- Sphingobacterium composti Yoo et al. 2007 non Ten et al. 2007 (isolates:1; rSTs:1)
- Sphingobacterium corticibacter (isolates:1; rSTs:1)
- Sphingobacterium corticibacterium (isolates:1; rSTs:1)
- Sphingobacterium daejeonense (isolates:2; rSTs:1)
- Sphingobacterium deserti (isolates:1; rSTs:1)
- Sphingobacterium detergens (isolates:1; rSTs:1)
- Sphingobacterium endophyticum (isolates:1; rSTs:1)
- Sphingobacterium faecium (isolates:5; rSTs:4 tree)
- Sphingobacterium gobiense (isolates:1; rSTs:1)
- Sphingobacterium griseoflavum (isolates:1; rSTs:1)
- Sphingobacterium haloxyli (isolates:1; rSTs:1)
- Sphingobacterium hotanense (isolates:3; rSTs:3 tree)
- Sphingobacterium humi (isolates:1; rSTs:1)
- Sphingobacterium hungaricum (isolates:1; rSTs:1)
- Sphingobacterium kitahiroshimense (isolates:1; rSTs:1)
- Sphingobacterium lactis (isolates:2; rSTs:1)
- Sphingobacterium litopenaei (isolates:1; rSTs:1)
- Sphingobacterium lumbrici (isolates:1; rSTs:1)
- Sphingobacterium micropteri (isolates:1; rSTs:1)
- Sphingobacterium mizutaii (isolates:6; rSTs:3 tree)
- Sphingobacterium multivorum (isolates:10; rSTs:5 tree)
- Sphingobacterium nematocida (isolates:1; rSTs:1)
- Sphingobacterium olei (isolates:1; rSTs:1)
- Sphingobacterium paludis (isolates:1; rSTs:1)
- Sphingobacterium paramultivorum (isolates:3; rSTs:2)
- Sphingobacterium paucimobilis (isolates:1; rSTs:1)
- Sphingobacterium pedocola (isolates:1; rSTs:1)
- Sphingobacterium phlebotomi (isolates:1; rSTs:1)
- Sphingobacterium prati (isolates:1; rSTs:1)
- Sphingobacterium psychroaquaticum (isolates:2; rSTs:2)
- Sphingobacterium puteale (isolates:1; rSTs:1)
- Sphingobacterium rhinopitheci (isolates:1; rSTs:1)
- Sphingobacterium shayense (isolates:1; rSTs:1)
- Sphingobacterium siyangense (isolates:6; rSTs:5 tree)
- Sphingobacterium soli (isolates:2; rSTs:1)
- Sphingobacterium sp. (isolates:55; rSTs:41 tree)
- Sphingobacterium spiritivorum (isolates:9; rSTs:5 tree)
- Sphingobacterium tabacisoli (isolates:1; rSTs:1)
- Sphingobacterium thalpophilum (isolates:4; rSTs:3)
- Sphingobacterium wenxiniae (isolates:1; rSTs:1)
- Sphingobacterium yanglingense (isolates:1; rSTs:1)
- Sphingobacterium zeae (isolates:1; rSTs:1)
- Albibacterium (isolates:1; rSTs:1)
- Sphingobacteriales (isolates:469; rSTs:406 tree)
- Bacteroidia (isolates:5904; rSTs:2734)
- Balneolota (isolates:23; rSTs:22 tree)
- Balneolia (isolates:23; rSTs:22 tree)
- Balneolales (isolates:23; rSTs:22 tree)
- Balneolaceae (isolates:20; rSTs:20 tree)
- Balneola (isolates:2; rSTs:2)
- Fodinibius (isolates:8; rSTs:8 tree)
- Aliifodinibius salipaludis (isolates:1; rSTs:1)
- Fodinibius halophilus (isolates:1; rSTs:1)
- Fodinibius roseus (isolates:1; rSTs:1)
- Fodinibius salicampi (isolates:1; rSTs:1)
- Fodinibius salinus (isolates:1; rSTs:1)
- Fodinibius saliphilus (isolates:1; rSTs:1)
- Fodinibius salsisoli (isolates:1; rSTs:1)
- Fodinibius sediminis (isolates:1; rSTs:1)
- Gracilimonas (isolates:4; rSTs:4 tree)
- Halalkalibaculum (isolates:1; rSTs:1)
- Halalkalibaculum roseum (isolates:1; rSTs:1)
- Rhodohalobacter (isolates:5; rSTs:5 tree)
- Cyclonatronaceae (isolates:3; rSTs:2)
- Balneolaceae (isolates:20; rSTs:20 tree)
- Balneolales (isolates:23; rSTs:22 tree)
- Balneolia (isolates:23; rSTs:22 tree)
- Bdellovibrionota (isolates:39; rSTs:31 tree)
- Bacteriovoracia (isolates:10; rSTs:8 tree)
- Bdellovibrionia (isolates:19; rSTs:17 tree)
- Bdellovibrionales (isolates:19; rSTs:17 tree)
- Oligoflexia (isolates:10; rSTs:6 tree)
- Caldisericota (isolates:1; rSTs:1)
- Calditrichota (isolates:2; rSTs:1)
- Campylobacterota (isolates:106698; rSTs:28125)
- Desulfurellia (isolates:6; rSTs:6 tree)
- Epsilonproteobacteria (isolates:106692; rSTs:28119)
- Campylobacterales (isolates:106668; rSTs:28101)
- Arcobacteraceae (isolates:452; rSTs:350 tree)
- Aliarcobacter (isolates:378; rSTs:304 tree)
- Aliarcobacter butzleri (isolates:242; rSTs:191 tree)
- Aliarcobacter cibarius (isolates:7; rSTs:4 tree)
- Aliarcobacter cryaerophilus (isolates:71; rSTs:69 tree)
- Aliarcobacter faecis (isolates:3; rSTs:1)
- Aliarcobacter lanthieri (isolates:6; rSTs:3 tree)
- Aliarcobacter skirrowii (isolates:34; rSTs:27 tree)
- Aliarcobacter thereius (isolates:9; rSTs:6 tree)
- Aliarcobacter trophiarum (isolates:4; rSTs:2)
- Aliarcobacter vitoriensis (isolates:2; rSTs:1)
- Arcobacter (isolates:40; rSTs:21 tree)
- Arcobacter acticola (isolates:1; rSTs:1)
- Arcobacter aquimarinus (isolates:2; rSTs:1)
- Arcobacter arenosus (isolates:1; rSTs:1)
- Arcobacter caeni (isolates:1; rSTs:1)
- Arcobacter cloacae (isolates:3; rSTs:2)
- Arcobacter defluvii (isolates:2; rSTs:1)
- Arcobacter ellisii (isolates:1; rSTs:1)
- Arcobacter lacus (isolates:3; rSTs:3 tree)
- Arcobacter nitrofigilis (isolates:3; rSTs:1)
- Arcobacter porcinus (isolates:6; rSTs:5 tree)
- Arcobacter sp. (isolates:11; rSTs:1)
- Arcobacter suis (isolates:2; rSTs:1)
- Arcobacter vandammei (isolates:2; rSTs:1)
- Arcobacter venerupis (isolates:2; rSTs:1)
- Candidatus Marinarcus (isolates:1; rSTs:1)
- Candidatus Marinarcus aquaticus (isolates:1; rSTs:1)
- Halarcobacter (isolates:10; rSTs:8 tree)
- Malaciobacter (isolates:15; rSTs:9 tree)
- Poseidonibacter (isolates:8; rSTs:7 tree)
- Aliarcobacter (isolates:378; rSTs:304 tree)
- Campylobacteraceae (isolates:102415; rSTs:24091)
- Campylobacter (isolates:102415; rSTs:24091)
- Campylobacter anatolicus (isolates:3; rSTs:3 tree)
- Campylobacter armoricus (isolates:11; rSTs:6 tree)
- Campylobacter aviculae (isolates:1; rSTs:1)
- Campylobacter avium (isolates:3; rSTs:1)
- Campylobacter bilis (isolates:6; rSTs:1)
- Campylobacter blaseri (isolates:3; rSTs:1)
- Campylobacter canadensis (isolates:8; rSTs:3 tree)
- Campylobacter coli (isolates:27306; rSTs:8598)
- Campylobacter concisus (isolates:289; rSTs:202 tree)
- Campylobacter corcagiensis (isolates:4; rSTs:1)
- Campylobacter cuniculorum (isolates:3; rSTs:1)
- Campylobacter curvus (isolates:19; rSTs:13 tree)
- Campylobacter estrildidarum (isolates:1; rSTs:1)
- Campylobacter felis (isolates:6; rSTs:6 tree)
- Campylobacter fetus (isolates:567; rSTs:142 tree)
- Campylobacter gastrosuis (isolates:1; rSTs:1)
- Campylobacter geochelonis (isolates:4; rSTs:4 tree)
- Campylobacter gracilis (isolates:4; rSTs:1)
- Campylobacter helveticus (isolates:29; rSTs:24 tree)
- Campylobacter hepaticus (isolates:54; rSTs:20 tree)
- Campylobacter hominis (isolates:4; rSTs:1)
- Campylobacter hyointestinalis (isolates:86; rSTs:64 tree)
- Campylobacter iguaniorum (isolates:3; rSTs:3 tree)
- Campylobacter insulaenigrae (isolates:19; rSTs:16 tree)
- Campylobacter jejuni (isolates:71085; rSTs:13522)
- Campylobacter lanienae (isolates:58; rSTs:52 tree)
- Campylobacter lari (isolates:708; rSTs:405 tree)
- Campylobacter magnus (isolates:5; rSTs:5 tree)
- Campylobacter majalis (isolates:1; rSTs:1)
- Campylobacter massiliensis (isolates:1; rSTs:1)
- Campylobacter mucosalis (isolates:8; rSTs:6 tree)
- Campylobacter novaezeelandiae (isolates:5; rSTs:3 tree)
- Campylobacter ornithocola (isolates:2; rSTs:1)
- Campylobacter ovis (isolates:3; rSTs:2)
- Campylobacter peloridis (isolates:6; rSTs:4 tree)
- Campylobacter pinnipediorum (isolates:11; rSTs:11 tree)
- Campylobacter portucalensis (isolates:1; rSTs:1)
- Campylobacter rectus (isolates:4; rSTs:2)
- Campylobacter showae (isolates:11; rSTs:7 tree)
- Campylobacter sp. (isolates:1227; rSTs:245 tree)
- Campylobacter sputorum (isolates:17; rSTs:11 tree)
- Campylobacter subantarcticus (isolates:3; rSTs:2)
- Campylobacter suis (isolates:1; rSTs:1)
- Campylobacter taeniopygiae (isolates:1; rSTs:1)
- Campylobacter troglodytis (isolates:1)
- Campylobacter upsaliensis (isolates:746; rSTs:646 tree)
- Campylobacter ureolyticus (isolates:41; rSTs:28 tree)
- Campylobacter volucris (isolates:18; rSTs:13 tree)
- Campylobacter vulpis (isolates:16; rSTs:6 tree)
- Candidatus Campylobacter infans (isolates:1; rSTs:1)
- Campylobacter (isolates:102415; rSTs:24091)
- Helicobacteraceae (isolates:3735; rSTs:3598)
- Helicobacter (isolates:3733; rSTs:3597)
- Helicobacter acinonychis (isolates:8; rSTs:4 tree)
- Helicobacter ailurogastricus (isolates:11; rSTs:7 tree)
- Helicobacter anatolicus (isolates:3; rSTs:3 tree)
- Helicobacter anseris (isolates:1; rSTs:1)
- Helicobacter apodemus (isolates:2; rSTs:2)
- Helicobacter aurati (isolates:2; rSTs:1)
- Helicobacter baculiformis (isolates:1; rSTs:1)
- Helicobacter bilis (isolates:5; rSTs:1)
- Helicobacter bizzozeronii (isolates:14; rSTs:13 tree)
- Helicobacter brantae (isolates:1; rSTs:1)
- Helicobacter burdigaliensis (isolates:1; rSTs:1)
- Helicobacter canadensis (isolates:5; rSTs:2)
- Helicobacter canis (isolates:6; rSTs:3 tree)
- Helicobacter cetorum (isolates:5; rSTs:5 tree)
- Helicobacter cholecystus (isolates:4; rSTs:3 tree)
- Helicobacter cinaedi (isolates:58; rSTs:13 tree)
- Helicobacter colisuis (isolates:3; rSTs:3 tree)
- Helicobacter cynogastricus (isolates:1; rSTs:1)
- Helicobacter didelphidarum (isolates:1; rSTs:1)
- Helicobacter enhydrae (isolates:1; rSTs:1)
- Helicobacter equorum (isolates:2; rSTs:2)
- Helicobacter felis (isolates:23; rSTs:16 tree)
- Helicobacter fennelliae (isolates:5; rSTs:4 tree)
- Helicobacter ganmani (isolates:1; rSTs:1)
- Helicobacter heilmannii (isolates:10; rSTs:7 tree)
- Helicobacter hepaticus (isolates:1; rSTs:1)
- Helicobacter himalayensis (isolates:1; rSTs:1)
- Helicobacter ibis (isolates:1; rSTs:1)
- Helicobacter jaachi (isolates:1; rSTs:2)
- Helicobacter japonicus (isolates:1; rSTs:1)
- Helicobacter kayseriensis (isolates:2; rSTs:1)
- Helicobacter labacensis (isolates:1; rSTs:1)
- Helicobacter labetoulli (isolates:1; rSTs:1)
- Helicobacter macacae (isolates:2; rSTs:1)
- Helicobacter magdeburgensis (isolates:1; rSTs:1)
- Helicobacter marmotae (isolates:2; rSTs:1)
- Helicobacter mehlei (isolates:3; rSTs:3 tree)
- Helicobacter mesocricetorum (isolates:1; rSTs:1)
- Helicobacter muridarum (isolates:5; rSTs:2)
- Helicobacter mustelae (isolates:3; rSTs:2)
- Helicobacter pametensis (isolates:3; rSTs:1)
- Helicobacter pullorum (isolates:26; rSTs:20 tree)
- Helicobacter pylori (isolates:3399; rSTs:3091)
- Helicobacter rappini (isolates:1; rSTs:1)
- Helicobacter rodentium (isolates:1; rSTs:1)
- Helicobacter saguini (isolates:5; rSTs:3 tree)
- Helicobacter salomonis (isolates:6; rSTs:5 tree)
- Helicobacter sp. (isolates:29; rSTs:314 tree)
- Helicobacter suis (isolates:44; rSTs:33 tree)
- Helicobacter trogontum (isolates:5; rSTs:3 tree)
- Helicobacter turcicus (isolates:2; rSTs:1)
- Helicobacter typhlonius (isolates:2; rSTs:2)
- Helicobacter valdiviensis (isolates:1; rSTs:1)
- Helicobacter vulpis (isolates:1; rSTs:1)
- Helicobacter winghamensis (isolates:8; rSTs:3 tree)
- Wolinella (isolates:2; rSTs:1)
- Wolinella succinogenes (isolates:2; rSTs:1)
- Helicobacter (isolates:3733; rSTs:3597)
- Hydrogenimonadaceae (isolates:6; rSTs:5 tree)
- Sulfurimonadaceae (isolates:26; rSTs:27 tree)
- Sulfuricurvum (isolates:3; rSTs:4 tree)
- Sulfurimonas (isolates:22; rSTs:22 tree)
- Candidatus Sulfurimonas baltica (isolates:1; rSTs:1)
- Candidatus Sulfurimonas marisnigri (isolates:1; rSTs:1)
- Sulfurimonas aquatica (isolates:1; rSTs:1)
- Sulfurimonas autotrophica (isolates:1; rSTs:1)
- Sulfurimonas crateris (isolates:1; rSTs:1)
- Sulfurimonas denitrificans (isolates:1; rSTs:1)
- Sulfurimonas gotlandica (isolates:2; rSTs:1)
- Sulfurimonas hongkongensis (isolates:1; rSTs:1)
- Sulfurimonas hydrogeniphila (isolates:1; rSTs:1)
- Sulfurimonas indica (isolates:1; rSTs:1)
- Sulfurimonas lithotrophica (isolates:1; rSTs:1)
- Sulfurimonas marina (isolates:1; rSTs:1)
- Sulfurimonas paralvinellae (isolates:1; rSTs:1)
- Sulfurimonas sediminis (isolates:1; rSTs:1)
- Sulfurimonas sp. (isolates:6; rSTs:7 tree)
- Sulfurimonas xiamenensis (isolates:1; rSTs:1)
- Thiovulum (isolates:1; rSTs:1)
- Thiovulum sp. (isolates:1; rSTs:1)
- Sulfurospirillaceae (isolates:22; rSTs:19 tree)
- Sulfurospirillum (isolates:22; rSTs:19 tree)
- Sulfurospirillum arcachonense (isolates:1; rSTs:1)
- Sulfurospirillum arsenophilum (isolates:1; rSTs:1)
- Sulfurospirillum barnesii (isolates:1; rSTs:1)
- Sulfurospirillum cavolei (isolates:2; rSTs:2)
- Sulfurospirillum deleyianum (isolates:1; rSTs:1)
- Sulfurospirillum diekertiae (isolates:5; rSTs:4 tree)
- Sulfurospirillum halorespirans (isolates:1; rSTs:1)
- Sulfurospirillum multivorans (isolates:2; rSTs:1)
- Sulfurospirillum oryzae (isolates:1; rSTs:1)
- Sulfurospirillum sp. (isolates:6; rSTs:5 tree)
- Sulfurospirillum tamanensis (isolates:1; rSTs:1)
- Sulfurospirillum (isolates:22; rSTs:19 tree)
- Sulfurovaceae (isolates:12; rSTs:11 tree)
- Arcobacteraceae (isolates:452; rSTs:350 tree)
- Nautiliales (isolates:24; rSTs:18 tree)
- Campylobacterales (isolates:106668; rSTs:28101)
- Candidatus Absconditabacteria (isolates:1)
- Candidatus Aerophobetes (isolates:1)
- Candidatus Aminicenantes (isolates:1; rSTs:1)
- Candidatus Auribacterota (isolates:1)
- Candidatus Bipolaricaulota (isolates:1; rSTs:1)
- Candidatus Calescamantes (isolates:1)
- Candidatus Cloacimonadota (isolates:2; rSTs:2)
- Candidatus Cryosericota (isolates:7)
- Candidatus Deferrimicrobiota (isolates:1; rSTs:1)
- Candidatus Fermentibacteria (isolates:4; rSTs:1)
- Candidatus Fervidibacterota (isolates:3)
- Candidatus Gracilibacteria (isolates:1)
- Candidatus Hydrogenedentota (isolates:1)
- Candidatus Kryptonia (isolates:12; rSTs:1 tree)
- Candidatus Kryptoniota (isolates:8; rSTs:2)
- Candidatus Latescibacterota (isolates:1)
- Candidatus Lithacetigenota (isolates:5)
- Candidatus Melainabacteria (isolates:6; rSTs:3 tree)
- Candidatus Microgenomates (isolates:1)
- Candidatus Moduliflexota (isolates:2; rSTs:2)
- Candidatus Omnitrophota (isolates:3; rSTs:2)
- Candidatus Paceibacterota (isolates:1)
- Candidatus Saccharibacteria (isolates:25; rSTs:13 tree)
- Candidatus Nanoperiomorbia (isolates:2; rSTs:2)
- Candidatus Nanosyncoccalia (isolates:3)
- Candidatus Saccharimonadia (isolates:6; rSTs:3 tree)
- Candidatus Nanosynbacterales (isolates:2; rSTs:2)
- Candidatus Saccharimonadales (isolates:4; rSTs:1)
- Candidatus Saccharimonadaceae (isolates:4; rSTs:1)
- Candidatus Chaera (isolates:1)
- Candidatus Chaera renei (isolates:1)
- Candidatus Microsaccharimonas (isolates:1)
- Candidatus Microsaccharimonas sossegonensis (isolates:1)
- Candidatus Nanosynsacchari (isolates:1)
- Candidatus Nanosynsacchari sp. (isolates:1)
- Candidatus Saccharimonas (isolates:1; rSTs:1)
- Candidatus Saccharimonas aalborgensis (isolates:1; rSTs:1)
- Candidatus Chaera (isolates:1)
- Candidatus Saccharimonadaceae (isolates:4; rSTs:1)
- Candidatus Tectomicrobia (isolates:3)
- Candidatus Tharpellota (isolates:3)
- Chlamydiota (isolates:1204; rSTs:524 tree)
- Chlamydiia (isolates:1204; rSTs:524 tree)
- Chlamydiales (isolates:1174; rSTs:498 tree)
- Candidatus Clavichlamydiaceae (isolates:1)
- Chlamydiaceae (isolates:1173; rSTs:498 tree)
- Candidatus Rubidus (isolates:1; rSTs:1)
- Candidatus Rubidus massiliensis (isolates:1; rSTs:1)
- Chlamydia (isolates:1169; rSTs:494 tree)
- Candidatus Chlamydia corallus (isolates:1; rSTs:1)
- Candidatus Chlamydia sanziniae (isolates:1; rSTs:1)
- Chlamydia abortus (isolates:61; rSTs:22 tree)
- Chlamydia avium (isolates:3; rSTs:4 tree)
- Chlamydia buteonis (isolates:3; rSTs:3 tree)
- Chlamydia caviae (isolates:1; rSTs:1)
- Chlamydia crocodili (isolates:1; rSTs:1)
- Chlamydia felis (isolates:1; rSTs:1)
- Chlamydia gallinacea (isolates:15; rSTs:12 tree)
- Chlamydia ibidis (isolates:2; rSTs:1)
- Chlamydia muridarum (isolates:32; rSTs:3 tree)
- Chlamydia pecorum (isolates:17; rSTs:13 tree)
- Chlamydia pneumoniae (isolates:13; rSTs:6 tree)
- Chlamydia poikilotherma (isolates:1; rSTs:1)
- Chlamydia psittaci (isolates:88; rSTs:38 tree)
- Chlamydia serpentis (isolates:1; rSTs:1)
- Chlamydia sp. (isolates:4; rSTs:1)
- Chlamydia suis (isolates:76; rSTs:43 tree)
- Chlamydia trachomatis (isolates:848; rSTs:341 tree)
- Chlamydiifrater (isolates:3; rSTs:3 tree)
- Candidatus Rubidus (isolates:1; rSTs:1)
- Parachlamydiales (isolates:30; rSTs:26 tree)
- Candidatus Parilichlamydiaceae (isolates:1; rSTs:1)
- Criblamydiaceae (isolates:2; rSTs:2)
- Parachlamydiaceae (isolates:19; rSTs:18 tree)
- Rhabdochlamydiaceae (isolates:5; rSTs:3 tree)
- Simkaniaceae (isolates:2; rSTs:1)
- Waddliaceae (isolates:1; rSTs:1)
- Chlamydiales (isolates:1174; rSTs:498 tree)
- Chlamydiia (isolates:1204; rSTs:524 tree)
- Chlorobiota (isolates:34; rSTs:28 tree)
- Chlorobiia (isolates:34; rSTs:28 tree)
- Chlorobiales (isolates:34; rSTs:28 tree)
- Chlorobiaceae (isolates:33; rSTs:27 tree)
- Chlorobaculum (isolates:6; rSTs:5 tree)
- Chlorobium (isolates:13; rSTs:11 tree)
- Candidatus Chlorobium masyuteum (isolates:1; rSTs:1)
- Chlorobium chlorochromatii (isolates:1; rSTs:1)
- Chlorobium ferrooxidans (isolates:1)
- Chlorobium limicola (isolates:2; rSTs:2)
- Chlorobium phaeobacteroides (isolates:1; rSTs:1)
- Chlorobium phaeovibrioides (isolates:6; rSTs:5 tree)
- Chlorobium sp. (isolates:1; rSTs:1)
- Pelodictyon (isolates:3; rSTs:3 tree)
- Prosthecochloris (isolates:11; rSTs:8 tree)
- Chloroherpetonaceae (isolates:1; rSTs:1)
- Chlorobiaceae (isolates:33; rSTs:27 tree)
- Chlorobiales (isolates:34; rSTs:28 tree)
- Chlorobiia (isolates:34; rSTs:28 tree)
- Chloroflexota (isolates:115; rSTs:95 tree)
- Anaerolineae (isolates:18; rSTs:13 tree)
- Aggregatilineales (isolates:1)
- Anaerolineales (isolates:17; rSTs:13 tree)
- Anaerolineaceae (isolates:17; rSTs:13 tree)
- Anaerolinea (isolates:2; rSTs:2)
- Bellilinea (isolates:2; rSTs:1)
- Bellilinea caldifistulae (isolates:2; rSTs:1)
- Brevefilum (isolates:1; rSTs:1)
- Brevefilum fermentans (isolates:1; rSTs:1)
- Flexilinea (isolates:1; rSTs:1)
- Flexilinea flocculi (isolates:1; rSTs:1)
- Leptolinea (isolates:3; rSTs:2)
- Levilinea (isolates:2; rSTs:1)
- Levilinea saccharolytica (isolates:2; rSTs:1)
- Longilinea (isolates:1; rSTs:1)
- Longilinea arvoryzae (isolates:1; rSTs:1)
- Ornatilinea (isolates:1; rSTs:1)
- Ornatilinea apprima (isolates:1; rSTs:1)
- Pelolinea (isolates:2; rSTs:1)
- Pelolinea submarina (isolates:2; rSTs:1)
- Thermanaerothrix (isolates:2; rSTs:2)
- Anaerolineaceae (isolates:17; rSTs:13 tree)
- Ardenticatenia (isolates:3; rSTs:1)
- Caldilineae (isolates:2; rSTs:2)
- Candidatus Thermofonsia (isolates:2)
- Chloroflexia (isolates:21; rSTs:18 tree)
- Chloroflexales (isolates:17; rSTs:15 tree)
- Chloroflexaceae (isolates:7; rSTs:6 tree)
- Oscillochloridaceae (isolates:7; rSTs:7 tree)
- Roseiflexaceae (isolates:3; rSTs:2)
- Herpetosiphonales (isolates:3; rSTs:3 tree)
- Kallotenuales (isolates:1)
- Chloroflexales (isolates:17; rSTs:15 tree)
- Dehalococcoidia (isolates:43; rSTs:38 tree)
- Ktedonobacteria (isolates:20; rSTs:19 tree)
- Ktedonobacterales (isolates:16; rSTs:15 tree)
- Dictyobacteraceae (isolates:7; rSTs:7 tree)
- Ktedonobacteraceae (isolates:5; rSTs:5 tree)
- Ktedonosporobacteraceae (isolates:1; rSTs:1)
- Reticulibacteraceae (isolates:1; rSTs:1)
- Thermosporotrichaceae (isolates:2; rSTs:1)
- Thermogemmatisporales (isolates:4; rSTs:4 tree)
- Ktedonobacterales (isolates:16; rSTs:15 tree)
- Tepidiformia (isolates:3; rSTs:2)
- Thermoflexia (isolates:2; rSTs:1)
- Anaerolineae (isolates:18; rSTs:13 tree)
- Chrysiogenota (isolates:6; rSTs:4 tree)
- Coprothermobacterota (isolates:4; rSTs:4 tree)
- Cyanobacteriota (isolates:852; rSTs:614 tree)
- Cyanophyceae (isolates:847; rSTs:609 tree)
- Acaryochloridales (isolates:42; rSTs:29 tree)
- Chroococcales (isolates:91; rSTs:103 tree)
- Aphanothecaceae (isolates:20; rSTs:16 tree)
- Aphanothece (isolates:3; rSTs:2 tree)
- Candidatus Atelocyanobacterium (isolates:3; rSTs:3 tree)
- Crocosphaera (isolates:9; rSTs:6 tree)
- Gloeothece (isolates:2; rSTs:2)
- Rippkaea (isolates:2; rSTs:2)
- Rippkaea orientalis (isolates:2; rSTs:2)
- Rubidibacter (isolates:1; rSTs:1)
- Rubidibacter lacunae (isolates:1; rSTs:1)
- Chroococcaceae (isolates:9; rSTs:9 tree)
- Chondrocystis (isolates:1; rSTs:1)
- Chondrocystis sp. (isolates:1; rSTs:1)
- Chroococcus (isolates:1; rSTs:1)
- Chroococcus sp. (isolates:1; rSTs:1)
- Chroogloeocystis (isolates:1; rSTs:1)
- Chroogloeocystis siderophila (isolates:1; rSTs:1)
- Gloeocapsa (isolates:1; rSTs:1)
- Gloeocapsa sp. (isolates:1; rSTs:1)
- Gloeocapsopsis (isolates:5; rSTs:5 tree)
- Chondrocystis (isolates:1; rSTs:1)
- Entophysalidaceae (isolates:1; rSTs:1)
- Geminocystaceae (isolates:26; rSTs:22 tree)
- Halothecacae (isolates:2; rSTs:2)
- Microcystaceae (isolates:33; rSTs:53 tree)
- Aphanothecaceae (isolates:20; rSTs:16 tree)
- Chroococcidiopsidales (isolates:7; rSTs:5 tree)
- Coleofasciculales (isolates:3; rSTs:2)
- Desertifilales (isolates:8; rSTs:5 tree)
- Geitlerinematales (isolates:1; rSTs:1)
- Gloeobacterales (isolates:4; rSTs:3 tree)
- Gloeomargaritales (isolates:1; rSTs:1)
- Gomontiellales (isolates:4; rSTs:4 tree)
- Chamaesiphonaceae (isolates:2; rSTs:2)
- Gomontiellaceae (isolates:1; rSTs:1)
- Leptolyngbyaceae (isolates:26; rSTs:17 tree)
- Alkalinema (isolates:1; rSTs:1)
- Alkalinema sp. (isolates:1; rSTs:1)
- Kovacikia (isolates:1; rSTs:1)
- Kovacikia minuta (isolates:1; rSTs:1)
- Leptodesmis (isolates:1; rSTs:1)
- Leptodesmis sichuanensis (isolates:1; rSTs:1)
- Leptolyngbya (isolates:18; rSTs:9 tree)
- Leptothermofonsia (isolates:1; rSTs:1)
- Leptothermofonsia sichuanensis (isolates:1; rSTs:1)
- Myxacorys (isolates:1; rSTs:1)
- Myxacorys almedinensis (isolates:1; rSTs:1)
- Phormidesmis (isolates:1; rSTs:1)
- Phormidesmis priestleyi (isolates:1; rSTs:1)
- Romeriopsis (isolates:1; rSTs:1)
- Romeriopsis navalis (isolates:1; rSTs:1)
- Stenomitos (isolates:1; rSTs:1)
- Stenomitos frigidus (isolates:1; rSTs:1)
- Alkalinema (isolates:1; rSTs:1)
- Leptolyngbyales (isolates:31; rSTs:22 tree)
- Leptolyngbyaceae (isolates:26; rSTs:17 tree)
- Alkalinema (isolates:1; rSTs:1)
- Alkalinema sp. (isolates:1; rSTs:1)
- Kovacikia (isolates:1; rSTs:1)
- Kovacikia minuta (isolates:1; rSTs:1)
- Leptodesmis (isolates:1; rSTs:1)
- Leptodesmis sichuanensis (isolates:1; rSTs:1)
- Leptolyngbya (isolates:18; rSTs:9 tree)
- Leptothermofonsia (isolates:1; rSTs:1)
- Leptothermofonsia sichuanensis (isolates:1; rSTs:1)
- Myxacorys (isolates:1; rSTs:1)
- Myxacorys almedinensis (isolates:1; rSTs:1)
- Phormidesmis (isolates:1; rSTs:1)
- Phormidesmis priestleyi (isolates:1; rSTs:1)
- Romeriopsis (isolates:1; rSTs:1)
- Romeriopsis navalis (isolates:1; rSTs:1)
- Stenomitos (isolates:1; rSTs:1)
- Stenomitos frigidus (isolates:1; rSTs:1)
- Alkalinema (isolates:1; rSTs:1)
- Neosynechococcaceae (isolates:1; rSTs:1)
- Trichocoleusaceae (isolates:5; rSTs:5 tree)
- Leptolyngbyaceae (isolates:26; rSTs:17 tree)
- Nodosilineales (isolates:9; rSTs:8 tree)
- Nostocales (isolates:288; rSTs:196 tree)
- Aphanizomenonaceae (isolates:105; rSTs:65 tree)
- Anabaenopsis (isolates:4; rSTs:3 tree)
- Aphanizomenon (isolates:4; rSTs:3 tree)
- Chrysosporum (isolates:1)
- Chrysosporum bergii (isolates:1)
- Cuspidothrix (isolates:2; rSTs:1)
- Cuspidothrix issatschenkoi (isolates:2; rSTs:1)
- Cylindrospermopsis (isolates:22; rSTs:11 tree)
- Dolichospermum (isolates:18; rSTs:13 tree)
- Nodularia (isolates:32; rSTs:19 tree)
- Raphidiopsis (isolates:1; rSTs:1)
- Raphidiopsis brookii (isolates:1; rSTs:1)
- Sphaerospermopsis (isolates:9; rSTs:6 tree)
- Umezakia (isolates:12; rSTs:8 tree)
- Calotrichaceae (isolates:16; rSTs:11 tree)
- Chlorogloeopsidaceae (isolates:4; rSTs:2)
- Fortieaceae (isolates:2; rSTs:2)
- Hapalosiphonaceae (isolates:42; rSTs:32 tree)
- Aetokthonos (isolates:1; rSTs:1)
- Aetokthonos hydrillicola (isolates:1; rSTs:1)
- Fischerella (isolates:38; rSTs:28 tree)
- Hapalosiphon (isolates:1; rSTs:1)
- Hapalosiphon sp. (isolates:1; rSTs:1)
- Mastigocoleus (isolates:1; rSTs:1)
- Mastigocoleus testarum (isolates:1; rSTs:1)
- Westiellopsis (isolates:1; rSTs:1)
- Westiellopsis prolifica (isolates:1; rSTs:1)
- Aetokthonos (isolates:1; rSTs:1)
- Nostocaceae (isolates:104; rSTs:69 tree)
- Amazonocrinis (isolates:1; rSTs:1)
- Amazonocrinis nigriterrae (isolates:1; rSTs:1)
- Anabaena (isolates:16; rSTs:13 tree)
- Anabaena azotica (isolates:1; rSTs:1)
- Anabaena catenula (isolates:1; rSTs:1)
- Anabaena cylindrica (isolates:4; rSTs:2)
- Anabaena lutea (isolates:1; rSTs:1)
- Anabaena minutissima (isolates:1; rSTs:1)
- Anabaena sp. (isolates:6; rSTs:5 tree)
- Anabaena sphaerica (isolates:1; rSTs:1)
- Anabaena subtropica (isolates:1; rSTs:1)
- Atlanticothrix (isolates:1; rSTs:1)
- Atlanticothrix silvestris (isolates:1; rSTs:1)
- Cylindrospermum (isolates:3; rSTs:3 tree)
- Dendronalium (isolates:1; rSTs:1)
- Dendronalium phyllosphericum (isolates:1; rSTs:1)
- Desmonostoc (isolates:1; rSTs:1)
- Desmonostoc muscorum (isolates:1; rSTs:1)
- Halotia (isolates:1; rSTs:1)
- Halotia branconii (isolates:1; rSTs:1)
- Komarekiella (isolates:1; rSTs:1)
- Komarekiella delphini-convector (isolates:1; rSTs:1)
- Nostoc (isolates:62; rSTs:42 tree)
- Nostoc calcicola (isolates:2; rSTs:1)
- Nostoc commune (isolates:2; rSTs:1)
- Nostoc cycadae (isolates:1; rSTs:1)
- Nostoc edaphicum (isolates:2; rSTs:1)
- Nostoc favosum (isolates:1; rSTs:1)
- Nostoc flagelliforme (isolates:1; rSTs:1)
- Nostoc foliaceum (isolates:1; rSTs:1)
- Nostoc linckia (isolates:13; rSTs:1)
- Nostoc mirabile (isolates:1; rSTs:1)
- Nostoc paludosum (isolates:1; rSTs:1)
- Nostoc piscinale (isolates:1; rSTs:1)
- Nostoc punctiforme (isolates:1; rSTs:1)
- Nostoc sp. (isolates:31; rSTs:27 tree)
- Nostoc sphaeroides (isolates:3; rSTs:2)
- Nostoc spongiaeforme (isolates:1; rSTs:1)
- Richelia (isolates:4; rSTs:2)
- Trichormus (isolates:13; rSTs:3 tree)
- Amazonocrinis (isolates:1; rSTs:1)
- Rivulariaceae (isolates:1; rSTs:1)
- Scytonemataceae (isolates:10; rSTs:10 tree)
- Symphyonemataceae (isolates:1; rSTs:1)
- Tolypothrichaceae (isolates:3; rSTs:3 tree)
- Aphanizomenonaceae (isolates:105; rSTs:65 tree)
- Oculatellales (isolates:6; rSTs:5 tree)
- Oculatellaceae (isolates:6; rSTs:5 tree)
- Oscillatoriales (isolates:154; rSTs:98 tree)
- Aerosakkonemataceae (isolates:2; rSTs:1)
- Cyanothecaceae (isolates:1; rSTs:1)
- Laspinemataceae (isolates:5; rSTs:5 tree)
- Microcoleaceae (isolates:112; rSTs:68 tree)
- Arthrospira (isolates:4; rSTs:4 tree)
- Baaleninema (isolates:1)
- Baaleninema simplex (isolates:1)
- Hydrocoleum (isolates:1)
- Hydrocoleum sp. (isolates:1)
- Kamptonema (isolates:4; rSTs:3 tree)
- Microcoleus (isolates:46; rSTs:18 tree)
- Oxynema (isolates:2; rSTs:2)
- Planktothricoides (isolates:3; rSTs:2)
- Planktothrix (isolates:43; rSTs:35 tree)
- Planktothrix agardhii (isolates:31; rSTs:20 tree)
- Planktothrix mougeotii (isolates:1; rSTs:1)
- Planktothrix paucivesiculata (isolates:1; rSTs:1)
- Planktothrix prolifica (isolates:2; rSTs:1)
- Planktothrix pseudagardhii (isolates:1; rSTs:1)
- Planktothrix rubescens (isolates:2; rSTs:2)
- Planktothrix serta (isolates:1; rSTs:1)
- Planktothrix sp. (isolates:2; rSTs:7 tree)
- Planktothrix tepida (isolates:2; rSTs:1)
- Sodalinema (isolates:1; rSTs:1)
- Sodalinema gerasimenkoae (isolates:1; rSTs:1)
- Trichodesmium (isolates:2; rSTs:1)
- Tychonema (isolates:2; rSTs:2)
- Oscillatoriaceae (isolates:24; rSTs:18 tree)
- Sirenicapillariaceae (isolates:9; rSTs:5 tree)
- Pleurocapsales (isolates:8; rSTs:7 tree)
- Prochlorotrichales (isolates:1; rSTs:1)
- Pseudanabaenales (isolates:17; rSTs:18 tree)
- Spirulinales (isolates:6; rSTs:5 tree)
- Synechococcales (isolates:165; rSTs:95 tree)
- Merismopediaceae (isolates:28; rSTs:11 tree)
- Petrachlorosaceae (isolates:1; rSTs:1)
- Prochloraceae (isolates:3; rSTs:3 tree)
- Prochlorococcaceae (isolates:94; rSTs:64 tree)
- Synechococcaceae (isolates:38; rSTs:15 tree)
- Thermostichales (isolates:1; rSTs:1)
- Cyanophyceae (isolates:847; rSTs:609 tree)
- Deferribacterota (isolates:18; rSTs:14 tree)
- Deferribacteres (isolates:18; rSTs:14 tree)
- Deferribacterales (isolates:18; rSTs:14 tree)
- Calditerrivibrionaceae (isolates:1; rSTs:1)
- Deferribacteraceae (isolates:2; rSTs:2)
- Deferrivibrionaceae (isolates:1; rSTs:1)
- Flexistipitaceae (isolates:2; rSTs:1)
- Geovibrionaceae (isolates:7; rSTs:5 tree)
- Mucispirillaceae (isolates:5; rSTs:4 tree)
- Deferribacterales (isolates:18; rSTs:14 tree)
- Deferribacteres (isolates:18; rSTs:14 tree)
- Deinococcota (isolates:289; rSTs:200 tree)
- Deinococci (isolates:289; rSTs:200 tree)
- Deinococcales (isolates:148; rSTs:100 tree)
- Deinococcaceae (isolates:148; rSTs:100 tree)
- Deinobacterium (isolates:1; rSTs:1)
- Deinobacterium chartae (isolates:1; rSTs:1)
- Deinococcus (isolates:147; rSTs:99 tree)
- Deinococcus actinosclerus (isolates:1; rSTs:1)
- Deinococcus aerius (isolates:1; rSTs:1)
- Deinococcus aerolatus (isolates:1; rSTs:1)
- Deinococcus aerophilus (isolates:1; rSTs:1)
- Deinococcus aestuarii (isolates:1; rSTs:1)
- Deinococcus aetherius (isolates:1; rSTs:1)
- Deinococcus alpinitundrae (isolates:1; rSTs:1)
- Deinococcus apachensis (isolates:1; rSTs:1)
- Deinococcus aquaedulcis (isolates:1; rSTs:1)
- Deinococcus aquaticus (isolates:1; rSTs:1)
- Deinococcus aquatilis (isolates:1; rSTs:1)
- Deinococcus aquiradiocola (isolates:1; rSTs:1)
- Deinococcus arboris (isolates:1; rSTs:1)
- Deinococcus arcticus (isolates:1; rSTs:1)
- Deinococcus arenae (isolates:1; rSTs:1)
- Deinococcus betulae (isolates:1; rSTs:1)
- Deinococcus budaensis (isolates:1; rSTs:1)
- Deinococcus cavernae (isolates:1; rSTs:1)
- Deinococcus cellulosilyticus (isolates:1; rSTs:1)
- Deinococcus daejeonensis (isolates:1; rSTs:1)
- Deinococcus deserti (isolates:1; rSTs:1)
- Deinococcus detaillensis (isolates:1; rSTs:1)
- Deinococcus ficus (isolates:4; rSTs:3 tree)
- Deinococcus fonticola (isolates:1; rSTs:1)
- Deinococcus frigens (isolates:1; rSTs:1)
- Deinococcus geothermalis (isolates:1; rSTs:1)
- Deinococcus gobiensis (isolates:1; rSTs:1)
- Deinococcus grandis (isolates:2; rSTs:1)
- Deinococcus hopiensis (isolates:1; rSTs:1)
- Deinococcus humi (isolates:2; rSTs:1)
- Deinococcus indicus (isolates:2; rSTs:2)
- Deinococcus irradiatisoli (isolates:1; rSTs:1)
- Deinococcus knuensis (isolates:1; rSTs:1)
- Deinococcus koreensis (isolates:1; rSTs:1)
- Deinococcus kurensis (isolates:1; rSTs:1)
- Deinococcus malanensis (isolates:1; rSTs:1)
- Deinococcus maricopensis (isolates:3; rSTs:1)
- Deinococcus marmoris (isolates:2; rSTs:2)
- Deinococcus metalli (isolates:2; rSTs:1)
- Deinococcus metallilatus (isolates:4; rSTs:1)
- Deinococcus misasensis (isolates:1; rSTs:1)
- Deinococcus multiflagellatus (isolates:1; rSTs:1)
- Deinococcus murrayi (isolates:1; rSTs:1)
- Deinococcus peraridilitoris (isolates:1; rSTs:1)
- Deinococcus phoenicis (isolates:1; rSTs:1)
- Deinococcus pimensis (isolates:1; rSTs:1)
- Deinococcus piscis (isolates:1; rSTs:1)
- Deinococcus planocerae (isolates:1; rSTs:1)
- Deinococcus proteolyticus (isolates:1; rSTs:1)
- Deinococcus psychrotolerans (isolates:1; rSTs:1)
- Deinococcus puniceus (isolates:1; rSTs:1)
- Deinococcus radiodurans (isolates:15; rSTs:2)
- Deinococcus radiophilus (isolates:2; rSTs:2)
- Deinococcus radiopugnans (isolates:3; rSTs:2)
- Deinococcus radiotolerans (isolates:1; rSTs:1)
- Deinococcus reticulitermitis (isolates:1; rSTs:1)
- Deinococcus rhizophilus (isolates:1)
- Deinococcus roseus (isolates:1; rSTs:1)
- Deinococcus rubellus (isolates:1; rSTs:1)
- Deinococcus ruber (isolates:1; rSTs:1)
- Deinococcus sedimenti (isolates:1; rSTs:1)
- Deinococcus seoulensis (isolates:1; rSTs:1)
- Deinococcus soli (isolates:1; rSTs:1)
- Deinococcus soli (ex Cha et al. 2016) (isolates:1; rSTs:1)
- Deinococcus sp. (isolates:30; rSTs:21 tree)
- Deinococcus taeanensis (isolates:1; rSTs:1)
- Deinococcus terrestris (isolates:1; rSTs:1)
- Deinococcus wulumuqiensis (isolates:19; rSTs:4 tree)
- Deinococcus xianganensis (isolates:1; rSTs:1)
- Deinococcus yavapaiensis (isolates:1; rSTs:1)
- Deinobacterium (isolates:1; rSTs:1)
- Deinococcaceae (isolates:148; rSTs:100 tree)
- Thermales (isolates:139; rSTs:99 tree)
- Thermaceae (isolates:139; rSTs:99 tree)
- Allomeiothermus (isolates:1; rSTs:1)
- Allomeiothermus silvanus (isolates:1; rSTs:1)
- Calidithermus (isolates:4; rSTs:4 tree)
- Marinithermus (isolates:1; rSTs:1)
- Marinithermus hydrothermalis (isolates:1; rSTs:1)
- Meiothermus (isolates:19; rSTs:15 tree)
- Meiothermus cerbereus (isolates:1; rSTs:1)
- Meiothermus granaticius (isolates:2; rSTs:1)
- Meiothermus hypogaeus (isolates:2; rSTs:1)
- Meiothermus luteus (isolates:1; rSTs:1)
- Meiothermus ruber (isolates:4; rSTs:3 tree)
- Meiothermus rufus (isolates:1; rSTs:1)
- Meiothermus sp. (isolates:4; rSTs:3 tree)
- Meiothermus taiwanensis (isolates:4; rSTs:4 tree)
- Oceanithermus (isolates:4; rSTs:2)
- Thermus (isolates:110; rSTs:76 tree)
- Thermus albus (isolates:1; rSTs:1)
- Thermus altitudinis (isolates:1; rSTs:1)
- Thermus amyloliquefaciens (isolates:1; rSTs:1)
- Thermus antranikianii (isolates:2; rSTs:1)
- Thermus aquaticus (isolates:3; rSTs:2)
- Thermus arciformis (isolates:2; rSTs:1)
- Thermus brevis (isolates:1; rSTs:1)
- Thermus brockianus (isolates:3; rSTs:3 tree)
- Thermus caldifontis (isolates:1; rSTs:1)
- Thermus caldilimi (isolates:1; rSTs:1)
- Thermus caliditerrae (isolates:2; rSTs:2)
- Thermus composti (isolates:1; rSTs:1)
- Thermus filiformis (isolates:1; rSTs:1)
- Thermus hydrothermalis (isolates:1; rSTs:1)
- Thermus igniterrae (isolates:1; rSTs:1)
- Thermus islandicus (isolates:1; rSTs:1)
- Thermus kawarayensis (isolates:1; rSTs:1)
- Thermus neutrinimicus (isolates:1; rSTs:1)
- Thermus oshimai (isolates:2; rSTs:2)
- Thermus parvatiensis (isolates:1; rSTs:1)
- Thermus scotoductus (isolates:40; rSTs:17 tree)
- Thermus sediminis (isolates:1; rSTs:1)
- Thermus sp. (isolates:6; rSTs:5 tree)
- Thermus tengchongensis (isolates:4; rSTs:4 tree)
- Thermus tenuipuniceus (isolates:1; rSTs:1)
- Thermus thalpophilus (isolates:1; rSTs:1)
- Thermus thermamylovorans (isolates:1; rSTs:1)
- Thermus thermophilus (isolates:28; rSTs:21 tree)
- Allomeiothermus (isolates:1; rSTs:1)
- Thermaceae (isolates:139; rSTs:99 tree)
- Trueperales (isolates:2; rSTs:1)
- Deinococcales (isolates:148; rSTs:100 tree)
- Deinococci (isolates:289; rSTs:200 tree)
- Dictyoglomota (isolates:4; rSTs:4 tree)
- Elusimicrobiota (isolates:5; rSTs:3 tree)
- Fibrobacterota (isolates:46; rSTs:40 tree)
- Fusobacteriota (isolates:411; rSTs:283 tree)
- Fusobacteriia (isolates:411; rSTs:283 tree)
- Fusobacteriales (isolates:411; rSTs:283 tree)
- Fusobacteriaceae (isolates:331; rSTs:214 tree)
- Cetobacterium (isolates:14; rSTs:12 tree)
- Fusobacterium (isolates:310; rSTs:199 tree)
- Fusobacterium animalis (isolates:18; rSTs:14 tree)
- Fusobacterium canifelinum (isolates:3; rSTs:3 tree)
- Fusobacterium gastrosuis (isolates:1; rSTs:1)
- Fusobacterium gonidiaformans (isolates:4; rSTs:2)
- Fusobacterium hominis (isolates:2; rSTs:2)
- Fusobacterium hwasookii (isolates:11; rSTs:7 tree)
- Fusobacterium massiliense (isolates:2; rSTs:1)
- Fusobacterium mortiferum (isolates:13; rSTs:10 tree)
- Fusobacterium necrogenes (isolates:1; rSTs:1)
- Fusobacterium necrophorum (isolates:72; rSTs:34 tree)
- Fusobacterium nucleatum (isolates:14; rSTs:7 tree)
- Fusobacterium perfoetens (isolates:3; rSTs:3 tree)
- Fusobacterium periodonticum (isolates:1; rSTs:1)
- Fusobacterium polymorphum (isolates:80; rSTs:43 tree)
- Fusobacterium pseudoperiodonticum (isolates:11; rSTs:9 tree)
- Fusobacterium russii (isolates:1; rSTs:1)
- Fusobacterium simiae (isolates:2; rSTs:1)
- Fusobacterium sp. (isolates:35; rSTs:38 tree)
- Fusobacterium ulcerans (isolates:12; rSTs:5 tree)
- Fusobacterium varium (isolates:13; rSTs:9 tree)
- Fusobacterium vincentii (isolates:11; rSTs:7 tree)
- Ilyobacter (isolates:1; rSTs:1)
- Ilyobacter polytropus (isolates:1; rSTs:1)
- Propionigenium (isolates:1)
- Propionigenium maris (isolates:1)
- Psychrilyobacter (isolates:5; rSTs:2)
- Haliovirgaceae (isolates:1; rSTs:1)
- Leptotrichiaceae (isolates:79; rSTs:68 tree)
- Caviibacter (isolates:2; rSTs:2)
- Caviibacter abscessus (isolates:2; rSTs:2)
- Leptotrichia (isolates:30; rSTs:26 tree)
- Leptotrichia buccalis (isolates:1; rSTs:1)
- Leptotrichia hofstadii (isolates:3; rSTs:2)
- Leptotrichia hongkongensis (isolates:1; rSTs:1)
- Leptotrichia massiliensis (isolates:1; rSTs:1)
- Leptotrichia shahii (isolates:2; rSTs:1)
- Leptotrichia sp. (isolates:11; rSTs:10 tree)
- Leptotrichia trevisanii (isolates:4; rSTs:4 tree)
- Leptotrichia wadei (isolates:7; rSTs:6 tree)
- Oceanivirga (isolates:2; rSTs:2)
- Pseudoleptotrichia (isolates:5; rSTs:2)
- Pseudoleptotrichia goodfellowii (isolates:5; rSTs:2)
- Pseudostreptobacillus (isolates:1; rSTs:1)
- Pseudostreptobacillus hongkongensis (isolates:1; rSTs:1)
- Sebaldella (isolates:3; rSTs:2)
- Sneathia (isolates:5; rSTs:4 tree)
- Streptobacillus (isolates:31; rSTs:29 tree)
- Caviibacter (isolates:2; rSTs:2)
- Fusobacteriaceae (isolates:331; rSTs:214 tree)
- Fusobacteriales (isolates:411; rSTs:283 tree)
- Fusobacteriia (isolates:411; rSTs:283 tree)
- Gemmatimonadota (isolates:9; rSTs:6 tree)
- Gemmatimonadetes (isolates:6; rSTs:5 tree)
- Longimicrobiia (isolates:3; rSTs:1)
- Ignavibacteriota (isolates:3; rSTs:3 tree)
- Kiritimatiellota (isolates:5; rSTs:3 tree)
- Lentisphaerota (isolates:9; rSTs:6 tree)
- Mycoplasmatota (isolates:2039; rSTs:1195 tree)
- Candidatus Izimaplasma (isolates:2)
- Mollicutes (isolates:416; rSTs:297 tree)
- Acholeplasmatales (isolates:86; rSTs:73 tree)
- Acholeplasmataceae (isolates:86; rSTs:73 tree)
- Acholeplasma (isolates:25; rSTs:19 tree)
- Alteracholeplasma (isolates:1; rSTs:1)
- Alteracholeplasma palmae (isolates:1; rSTs:1)
- Candidatus Phytoplasma (isolates:47; rSTs:43 tree)
- 'Bituminaria bituminosa' little leaf phytoplasma (isolates:3; rSTs:3 tree)
- 'Bonamia sp.' little leaf phytoplasma (isolates:1)
- 'Chrysanthemum coronarium' phytoplasma (isolates:1)
- 'Cynodon dactylon' phytoplasma (isolates:1; rSTs:1)
- 'Fragaria x ananassa' phyllody phytoplasma (isolates:1; rSTs:1)
- 'Gossypium sp.' phytoplasma (isolates:1; rSTs:1)
- 'Melaleuca sp.' phytoplasma (isolates:1; rSTs:1)
- 'Parthenium hysterophorus' phyllody phytoplasma (isolates:1; rSTs:1)
- 'Parthenium sp.' phyllody phytoplasma (isolates:1; rSTs:1)
- 'Planchonia careya' phytoplasma (isolates:1; rSTs:1)
- 'Santalum album' aster yellows phytoplasma (isolates:1; rSTs:1)
- Aster yellows witches'-broom phytoplasma (isolates:1; rSTs:1)
- Candidatus Phytoplasma australiense (isolates:2; rSTs:2)
- Candidatus Phytoplasma luffae (isolates:1; rSTs:1)
- Candidatus Phytoplasma mali (isolates:1; rSTs:1)
- Candidatus Phytoplasma meliae (isolates:1; rSTs:1)
- Candidatus Phytoplasma oryzae (isolates:1; rSTs:1)
- Candidatus Phytoplasma phoenicium (isolates:1)
- Candidatus Phytoplasma pini (isolates:1; rSTs:1)
- Candidatus Phytoplasma pruni (isolates:1; rSTs:1)
- Candidatus Phytoplasma rubi (isolates:1; rSTs:1)
- Candidatus Phytoplasma sacchari (isolates:2; rSTs:1)
- Candidatus Phytoplasma solani (isolates:2; rSTs:2)
- Candidatus Phytoplasma sp. (isolates:1; rSTs:2)
- Candidatus Phytoplasma tritici (isolates:1; rSTs:1)
- Candidatus Phytoplasma ziziphi (isolates:2; rSTs:1)
- Chrysanthemum yellows phytoplasma (isolates:1; rSTs:1)
- Columbia Basin potato purple top phytoplasma (isolates:1; rSTs:1)
- Hydrangea phyllody phytoplasma (isolates:1; rSTs:1)
- Italian clover phyllody phytoplasma (isolates:1; rSTs:1)
- Maize bushy stunt phytoplasma (isolates:1; rSTs:1)
- Milkweed yellows phytoplasma (isolates:1; rSTs:1)
- Mulberry dwarf phytoplasma (isolates:1; rSTs:1)
- New Jersey aster yellows phytoplasma (isolates:1; rSTs:1)
- Onion yellows phytoplasma (isolates:1; rSTs:1)
- Paulownia witches'-broom phytoplasma (isolates:1; rSTs:1)
- Peanut witches'-broom phytoplasma (isolates:1; rSTs:1)
- Poinsettia branch-inducing phytoplasma (isolates:1; rSTs:1)
- Rice orange leaf phytoplasma (isolates:1; rSTs:1)
- Texas Phoenix palm phytoplasma (isolates:1; rSTs:1)
- Vaccinium witches'-broom phytoplasma (isolates:1; rSTs:1)
- Haploplasma (isolates:4; rSTs:3 tree)
- Mariniplasma (isolates:3; rSTs:2)
- Paracholeplasma (isolates:5; rSTs:4 tree)
- Phytoplasma (isolates:1; rSTs:1 tree)
- Phytoplasma sp. (isolates:1; rSTs:1)
- Acholeplasmataceae (isolates:86; rSTs:73 tree)
- Anaeroplasmatales (isolates:1; rSTs:1)
- Entomoplasmatales (isolates:112; rSTs:75 tree)
- Entomoplasmataceae (isolates:41; rSTs:28 tree)
- Entomoplasma (isolates:3; rSTs:2 tree)
- Mesoplasma (isolates:38; rSTs:26 tree)
- Mesoplasma chauliocola (isolates:2; rSTs:1)
- Mesoplasma coleopterae (isolates:3; rSTs:3 tree)
- Mesoplasma corruscae (isolates:1; rSTs:1)
- Mesoplasma entomophilum (isolates:3; rSTs:2)
- Mesoplasma florum (isolates:10; rSTs:7 tree)
- Mesoplasma grammopterae (isolates:1; rSTs:1)
- Mesoplasma lactucae (isolates:3; rSTs:2)
- Mesoplasma melaleucae (isolates:2; rSTs:1)
- Mesoplasma photuris (isolates:1; rSTs:1)
- Mesoplasma seiffertii (isolates:1; rSTs:1)
- Mesoplasma sp. (isolates:8; rSTs:4 tree)
- Mesoplasma syrphidae (isolates:2; rSTs:1)
- Mesoplasma tabanidae (isolates:1; rSTs:1)
- Spiroplasmataceae (isolates:65; rSTs:44 tree)
- Spiroplasma (isolates:65; rSTs:44 tree)
- Spiroplasma alleghenense (isolates:1; rSTs:1)
- Spiroplasma apis (isolates:1; rSTs:1)
- Spiroplasma atrichopogonis (isolates:1; rSTs:1)
- Spiroplasma cantharicola (isolates:1; rSTs:1)
- Spiroplasma chinense (isolates:1; rSTs:1)
- Spiroplasma chrysopicola (isolates:1; rSTs:1)
- Spiroplasma citri (isolates:11; rSTs:4 tree)
- Spiroplasma clarkii (isolates:1; rSTs:1)
- Spiroplasma corruscae (isolates:1; rSTs:1)
- Spiroplasma culicicola (isolates:1; rSTs:1)
- Spiroplasma diminutum (isolates:1; rSTs:1)
- Spiroplasma endosymbiont of 'Nebria riversi' (isolates:1)
- Spiroplasma endosymbiont of Danaus chrysippus (isolates:1; rSTs:1)
- Spiroplasma endosymbiont of Lariophagus distinguendus (isolates:1; rSTs:1)
- Spiroplasma endosymbiont of Megaselia nigra (isolates:1; rSTs:1)
- Spiroplasma eriocheiris (isolates:2; rSTs:1)
- Spiroplasma floricola (isolates:1; rSTs:1)
- Spiroplasma gladiatoris (isolates:1; rSTs:1)
- Spiroplasma helicoides (isolates:1; rSTs:1)
- Spiroplasma ixodetis (isolates:1)
- Spiroplasma kunkelii (isolates:1; rSTs:1)
- Spiroplasma litorale (isolates:1; rSTs:1)
- Spiroplasma melliferum (isolates:4; rSTs:3 tree)
- Spiroplasma monobiae (isolates:1; rSTs:1)
- Spiroplasma phoeniceum (isolates:1; rSTs:1)
- Spiroplasma platyhelix (isolates:2; rSTs:1)
- Spiroplasma poulsonii (isolates:6; rSTs:3 tree)
- Spiroplasma sabaudiense (isolates:1; rSTs:1)
- Spiroplasma sp. (isolates:12; rSTs:7 tree)
- Spiroplasma syrphidicola (isolates:1; rSTs:1)
- Spiroplasma tabanidicola (isolates:1; rSTs:1)
- Spiroplasma taiwanense (isolates:1; rSTs:1)
- Spiroplasma turonicum (isolates:2; rSTs:1)
- Spiroplasma (isolates:65; rSTs:44 tree)
- Entomoplasmataceae (isolates:41; rSTs:28 tree)
- Haloplasmatales (isolates:1; rSTs:1)
- Mycoplasmatales (isolates:216; rSTs:147 tree)
- Candidatus Hepatoplasmataceae (isolates:2; rSTs:2)
- Mycoplasmataceae (isolates:214; rSTs:145 tree)
- Mycoplasma (isolates:214; rSTs:145 tree)
- Candidatus Mycoplasma haematobovis (isolates:1)
- Candidatus Mycoplasma haematohominis (isolates:1)
- Candidatus Mycoplasma haematolamae (isolates:1)
- Candidatus Mycoplasma haematominutum (isolates:1)
- Candidatus Mycoplasma mahonii (isolates:1)
- Mycoplasma amphoriforme (isolates:20; rSTs:11 tree)
- Mycoplasma anserisalpingitidis (isolates:5; rSTs:4 tree)
- Mycoplasma bradburyae (isolates:7; rSTs:6 tree)
- Mycoplasma buteonis (isolates:1; rSTs:1)
- Mycoplasma capricolum (isolates:32; rSTs:25 tree)
- Mycoplasma cottewii (isolates:1; rSTs:1)
- Mycoplasma crocodyli (isolates:1; rSTs:1)
- Mycoplasma elephantis (isolates:1; rSTs:1)
- Mycoplasma enhydrae (isolates:3; rSTs:3 tree)
- Mycoplasma feriruminatoris (isolates:9; rSTs:9 tree)
- Mycoplasma haemocanis (isolates:1; rSTs:1)
- Mycoplasma haemofelis (isolates:2; rSTs:2)
- Mycoplasma leachii (isolates:3; rSTs:3 tree)
- Mycoplasma leonicaptivi (isolates:1; rSTs:1)
- Mycoplasma marinum (isolates:1; rSTs:1)
- Mycoplasma miroungigenitalium (isolates:3; rSTs:3 tree)
- Mycoplasma miroungirhinis (isolates:1; rSTs:1)
- Mycoplasma mycoides (isolates:70; rSTs:32 tree)
- Mycoplasma nasistruthionis (isolates:2; rSTs:1)
- Mycoplasma ovis (isolates:1; rSTs:1)
- Mycoplasma parvum (isolates:1)
- Mycoplasma phocimorsus (isolates:6; rSTs:6 tree)
- Mycoplasma phocoenae (isolates:1; rSTs:1)
- Mycoplasma phocoeninasale (isolates:2; rSTs:2)
- Mycoplasma procyoni (isolates:1; rSTs:1)
- Mycoplasma putrefaciens (isolates:3; rSTs:2)
- Mycoplasma simbae (isolates:1; rSTs:1)
- Mycoplasma sp. (isolates:3; rSTs:3 tree)
- Mycoplasma struthionis (isolates:2; rSTs:2)
- Mycoplasma suis (isolates:2)
- Mycoplasma tauri (isolates:7; rSTs:7 tree)
- Mycoplasma testudineum (isolates:2; rSTs:1)
- Mycoplasma todarodis (isolates:1)
- Mycoplasma tullyi (isolates:1; rSTs:1)
- Mycoplasma wenyonii (isolates:2; rSTs:2)
- Mycoplasma yeatsii (isolates:3; rSTs:2)
- Mycoplasma zalophi (isolates:3; rSTs:3 tree)
- Mycoplasma zalophidermidis (isolates:3; rSTs:3 tree)
- Mycoplasma (isolates:214; rSTs:145 tree)
- Acholeplasmatales (isolates:86; rSTs:73 tree)
- Myxococcota (isolates:202; rSTs:163 tree)
- Myxococcia (isolates:157; rSTs:127 tree)
- Myxococcales (isolates:157; rSTs:127 tree)
- Anaeromyxobacteraceae (isolates:15; rSTs:14 tree)
- Anaeromyxobacter (isolates:15; rSTs:14 tree)
- Anaeromyxobacter dehalogenans (isolates:2; rSTs:2)
- Anaeromyxobacter diazotrophicus (isolates:1; rSTs:1)
- Anaeromyxobacter oryzae (isolates:1; rSTs:1)
- Anaeromyxobacter oryzisoli (isolates:1)
- Anaeromyxobacter paludicola (isolates:1; rSTs:1)
- Anaeromyxobacter soli (isolates:1)
- Anaeromyxobacter sp. (isolates:7; rSTs:9 tree)
- Anaeromyxobacter terrae (isolates:1)
- Anaeromyxobacter (isolates:15; rSTs:14 tree)
- Archangiaceae (isolates:19; rSTs:17 tree)
- Myxococcaceae (isolates:118; rSTs:92 tree)
- Aggregicoccus (isolates:1; rSTs:1)
- Aggregicoccus sp. (isolates:1; rSTs:1)
- Citreicoccus (isolates:1; rSTs:1)
- Citreicoccus inhibens (isolates:1; rSTs:1)
- Corallococcus (isolates:51; rSTs:46 tree)
- Corallococcus aberystwythensis (isolates:1; rSTs:1)
- Corallococcus carmarthensis (isolates:2; rSTs:2)
- Corallococcus coralloides (isolates:2; rSTs:2)
- Corallococcus exercitus (isolates:2; rSTs:2)
- Corallococcus exiguus (isolates:13; rSTs:12 tree)
- Corallococcus interemptor (isolates:1; rSTs:1)
- Corallococcus llansteffanensis (isolates:1; rSTs:1)
- Corallococcus macrosporus (isolates:2; rSTs:2)
- Corallococcus praedator (isolates:1; rSTs:1)
- Corallococcus sicarius (isolates:1; rSTs:1)
- Corallococcus silvisoli (isolates:1; rSTs:1)
- Corallococcus soli (isolates:1; rSTs:1)
- Corallococcus sp. (isolates:22; rSTs:18 tree)
- Corallococcus terminator (isolates:1; rSTs:1)
- Myxococcus (isolates:58; rSTs:38 tree)
- Myxococcus dinghuensis (isolates:1; rSTs:1)
- Myxococcus eversor (isolates:1; rSTs:1)
- Myxococcus fulvus (isolates:4; rSTs:2)
- Myxococcus guangdongensis (isolates:1; rSTs:1)
- Myxococcus hansupus (isolates:1; rSTs:1)
- Myxococcus landrumus (isolates:1; rSTs:1)
- Myxococcus llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis (isolates:1; rSTs:1)
- Myxococcus qinghaiensis (isolates:1; rSTs:1)
- Myxococcus sp. (isolates:25; rSTs:18 tree)
- Myxococcus stipitatus (isolates:1; rSTs:1)
- Myxococcus vastator (isolates:1; rSTs:1)
- Myxococcus virescens (isolates:2; rSTs:1)
- Myxococcus xanthus (isolates:18; rSTs:8 tree)
- Pyxidicoccus (isolates:7; rSTs:6 tree)
- Aggregicoccus (isolates:1; rSTs:1)
- Vulgatibacteraceae (isolates:1; rSTs:1)
- Anaeromyxobacteraceae (isolates:15; rSTs:14 tree)
- Myxococcales (isolates:157; rSTs:127 tree)
- Myxococcia (isolates:157; rSTs:127 tree)
- Nitrospinota (isolates:8; rSTs:3 tree)
- Nitrospirota (isolates:40; rSTs:27 tree)
- Nitrospiria (isolates:30; rSTs:19 tree)
- Candidatus Troglogloeales (isolates:1)
- Nitrospirales (isolates:29; rSTs:19 tree)
- Nitrospiraceae (isolates:29; rSTs:19 tree)
- Candidatus Magnetobacterium (isolates:3)
- Candidatus Nitronereus (isolates:1)
- Candidatus Nitronereus thalassa (isolates:1)
- Candidatus Sulfobium (isolates:1)
- Candidatus Sulfobium mesophilum (isolates:1)
- Leptospirillum (isolates:10; rSTs:7 tree)
- Nitrospira (isolates:14; rSTs:12 tree)
- Candidatus Nitrospira inopinata (isolates:1; rSTs:1)
- Candidatus Nitrospira nitrificans (isolates:1; rSTs:1)
- Candidatus Nitrospira nitrosa (isolates:1; rSTs:1)
- Nitrospira cf. moscoviensis SBR1015 (isolates:1; rSTs:1)
- Nitrospira defluvii (isolates:2; rSTs:2)
- Nitrospira japonica (isolates:1; rSTs:1)
- Nitrospira lenta (isolates:1; rSTs:1)
- Nitrospira moscoviensis (isolates:1; rSTs:1)
- Nitrospira sp. (isolates:4; rSTs:3 tree)
- Nitrospira tepida (isolates:1)
- Nitrospiraceae (isolates:29; rSTs:19 tree)
- Thermodesulfovibrionia (isolates:10; rSTs:8 tree)
- Nitrospiria (isolates:30; rSTs:19 tree)
- Planctomycetota (isolates:190; rSTs:156 tree)
- Candidatus Brocadiia (isolates:16; rSTs:9 tree)
- Candidatus Brocadiales (isolates:16; rSTs:9 tree)
- Candidatus Bathyanammoxibiaceae (isolates:1)
- Candidatus Brocadiaceae (isolates:12; rSTs:6 tree)
- Candidatus Scalinduaceae (isolates:3; rSTs:3 tree)
- Candidatus Brocadiales (isolates:16; rSTs:9 tree)
- Candidatus Uabimicrobiia (isolates:1)
- Phycisphaerae (isolates:11; rSTs:7 tree)
- Phycisphaerales (isolates:5; rSTs:4 tree)
- Phycisphaeraceae (isolates:5; rSTs:4 tree)
- Algisphaera (isolates:1; rSTs:1)
- Algisphaera agarilytica (isolates:1; rSTs:1)
- Mucisphaera (isolates:1; rSTs:1)
- Mucisphaera calidilacus (isolates:1; rSTs:1)
- Phycisphaera (isolates:2; rSTs:1)
- Phycisphaera mikurensis (isolates:2; rSTs:1)
- Poriferisphaera (isolates:1; rSTs:1)
- Poriferisphaera corsica (isolates:1; rSTs:1)
- Algisphaera (isolates:1; rSTs:1)
- Phycisphaeraceae (isolates:5; rSTs:4 tree)
- Sedimentisphaerales (isolates:5; rSTs:3 tree)
- Tepidisphaerales (isolates:1)
- Phycisphaerales (isolates:5; rSTs:4 tree)
- Planctomycetia (isolates:162; rSTs:140 tree)
- Gemmatales (isolates:20; rSTs:13 tree)
- Gemmataceae (isolates:20; rSTs:13 tree)
- Fimbriiglobus (isolates:1; rSTs:1)
- Fimbriiglobus ruber (isolates:1; rSTs:1)
- Frigoriglobus (isolates:1; rSTs:1)
- Frigoriglobus tundricola (isolates:1; rSTs:1)
- Gemmata (isolates:12; rSTs:6 tree)
- Limnoglobus (isolates:1; rSTs:1)
- Limnoglobus roseus (isolates:1; rSTs:1)
- Telmatocola (isolates:1; rSTs:1)
- Telmatocola sphagniphila (isolates:1; rSTs:1)
- Thermogemmata (isolates:1; rSTs:1)
- Thermogemmata fonticola (isolates:1; rSTs:1)
- Tuwongella (isolates:1)
- Tuwongella immobilis (isolates:1)
- Urbifossiella (isolates:1; rSTs:1)
- Urbifossiella limnaea (isolates:1; rSTs:1)
- Zavarzinella (isolates:1; rSTs:1)
- Zavarzinella formosa (isolates:1; rSTs:1)
- Fimbriiglobus (isolates:1; rSTs:1)
- Gemmataceae (isolates:20; rSTs:13 tree)
- Isosphaerales (isolates:17; rSTs:12 tree)
- Pirellulales (isolates:80; rSTs:75 tree)
- Lacipirellulaceae (isolates:14; rSTs:14 tree)
- Adhaeretor (isolates:1; rSTs:1)
- Adhaeretor mobilis (isolates:1; rSTs:1)
- Aeoliella (isolates:2; rSTs:2)
- Botrimarina (isolates:3; rSTs:3 tree)
- Bythopirellula (isolates:2; rSTs:2)
- Lacipirellula (isolates:2; rSTs:2)
- Pirellulimonas (isolates:1; rSTs:1)
- Pirellulimonas nuda (isolates:1; rSTs:1)
- Posidoniimonas (isolates:2; rSTs:2)
- Pseudobythopirellula (isolates:1; rSTs:1)
- Pseudobythopirellula maris (isolates:1; rSTs:1)
- Adhaeretor (isolates:1; rSTs:1)
- Pirellulaceae (isolates:65; rSTs:60 tree)
- Allorhodopirellula (isolates:2; rSTs:2)
- Anatilimnocola (isolates:2; rSTs:2)
- Aporhodopirellula (isolates:2; rSTs:2)
- Aureliella (isolates:1; rSTs:1)
- Aureliella helgolandensis (isolates:1; rSTs:1)
- Blastopirellula (isolates:5; rSTs:4 tree)
- Bremerella (isolates:5; rSTs:5 tree)
- Candidatus Laterigemmans (isolates:2; rSTs:1)
- Candidatus Laterigemmans baculatus (isolates:2; rSTs:1)
- Lignipirellula (isolates:1; rSTs:1)
- Lignipirellula cremea (isolates:1; rSTs:1)
- Mariniblastus (isolates:2; rSTs:2)
- Mariniblastus fucicola (isolates:2; rSTs:2)
- Neorhodopirellula (isolates:2; rSTs:2)
- Novipirellula (isolates:3; rSTs:3 tree)
- Pirellula (isolates:1; rSTs:1)
- Pirellula staleyi (isolates:1; rSTs:1)
- Rhodopirellula (isolates:14; rSTs:13 tree)
- Rhodopirellula bahusiensis (isolates:1; rSTs:1)
- Rhodopirellula baltica (isolates:4; rSTs:4 tree)
- Rhodopirellula europaea (isolates:2; rSTs:1)
- Rhodopirellula islandica (isolates:1; rSTs:1)
- Rhodopirellula maiorica (isolates:1; rSTs:1)
- Rhodopirellula sallentina (isolates:1; rSTs:1)
- Rhodopirellula sp. (isolates:4; rSTs:4 tree)
- Roseiconus (isolates:4; rSTs:4 tree)
- Roseimaritima (isolates:4; rSTs:3 tree)
- Rosistilla (isolates:4; rSTs:4 tree)
- Rubripirellula (isolates:6; rSTs:5 tree)
- Stieleria (isolates:5; rSTs:5 tree)
- Thermoguttaceae (isolates:1; rSTs:1)
- Lacipirellulaceae (isolates:14; rSTs:14 tree)
- Planctomycetales (isolates:45; rSTs:40 tree)
- Planctomycetaceae (isolates:45; rSTs:40 tree)
- Alienimonas (isolates:2; rSTs:2)
- Calycomorphotria (isolates:1; rSTs:1)
- Calycomorphotria hydatis (isolates:1; rSTs:1)
- Caulifigura (isolates:1; rSTs:1)
- Caulifigura coniformis (isolates:1; rSTs:1)
- Crateriforma (isolates:3; rSTs:3 tree)
- Fuerstiella (isolates:1; rSTs:1)
- Fuerstiella marisgermanici (isolates:1; rSTs:1)
- Gimesia (isolates:18; rSTs:14 tree)
- Gimesia alba (isolates:1; rSTs:1)
- Gimesia algae (isolates:1; rSTs:1)
- Gimesia aquarii (isolates:2; rSTs:2)
- Gimesia benthica (isolates:1; rSTs:1)
- Gimesia chilikensis (isolates:4; rSTs:2)
- Gimesia fumaroli (isolates:1; rSTs:1)
- Gimesia maris (isolates:5; rSTs:3 tree)
- Gimesia panareensis (isolates:3; rSTs:3 tree)
- Maioricimonas (isolates:1; rSTs:1)
- Maioricimonas rarisocia (isolates:1; rSTs:1)
- Planctomicrobium (isolates:1; rSTs:1)
- Planctomicrobium piriforme (isolates:1; rSTs:1)
- Planctomyces (isolates:1; rSTs:1)
- Planctomyces sp. (isolates:1; rSTs:1)
- Planctopirus (isolates:3; rSTs:3 tree)
- Polystyrenella (isolates:1; rSTs:1)
- Polystyrenella longa (isolates:1; rSTs:1)
- Rubinisphaera (isolates:4; rSTs:4 tree)
- Schlesneria (isolates:1; rSTs:1)
- Schlesneria paludicola (isolates:1; rSTs:1)
- Stratiformator (isolates:1)
- Stratiformator vulcanicus (isolates:1)
- Symmachiella (isolates:3; rSTs:3 tree)
- Thalassoglobus (isolates:2; rSTs:2)
- Thalassoroseus (isolates:1; rSTs:1)
- Thalassoroseus pseudoceratinae (isolates:1; rSTs:1)
- Planctomycetaceae (isolates:45; rSTs:40 tree)
- Gemmatales (isolates:20; rSTs:13 tree)
- Candidatus Brocadiia (isolates:16; rSTs:9 tree)
- Pseudomonadota (isolates:391219; rSTs:117494)
- Acidithiobacillia (isolates:121; rSTs:66 tree)
- Acidithiobacillales (isolates:121; rSTs:66 tree)
- Acidithiobacillaceae (isolates:115; rSTs:63 tree)
- Acidithiobacillus (isolates:113; rSTs:62 tree)
- Acidithiobacillus albertensis (isolates:1; rSTs:1)
- Acidithiobacillus caldus (isolates:18; rSTs:8 tree)
- Acidithiobacillus concretivorus (isolates:1; rSTs:1)
- Acidithiobacillus ferrianus (isolates:1; rSTs:1)
- Acidithiobacillus ferridurans (isolates:7; rSTs:4 tree)
- Acidithiobacillus ferriphilus (isolates:21; rSTs:13 tree)
- Acidithiobacillus ferrivorans (isolates:8; rSTs:6 tree)
- Acidithiobacillus ferrooxidans (isolates:22; rSTs:7 tree)
- Acidithiobacillus ferruginosus (isolates:1)
- Acidithiobacillus marinus (isolates:1; rSTs:1)
- Acidithiobacillus montserratensis (isolates:1; rSTs:1)
- Acidithiobacillus sp. (isolates:9; rSTs:5 tree)
- Acidithiobacillus sulfuriphilus (isolates:1; rSTs:1)
- Acidithiobacillus sulfurivorans (isolates:1; rSTs:1)
- Acidithiobacillus thiooxidans (isolates:20; rSTs:12 tree)
- Igneacidithiobacillus (isolates:2; rSTs:1)
- Acidithiobacillus (isolates:113; rSTs:62 tree)
- Thermithiobacillaceae (isolates:6; rSTs:3)
- Acidithiobacillaceae (isolates:115; rSTs:63 tree)
- Acidithiobacillales (isolates:121; rSTs:66 tree)
- Alphaproteobacteria (isolates:11718; rSTs:7818)
- Candidatus Pelagibacterales (isolates:16; rSTs:14 tree)
- Candidatus Puniceispirillales (isolates:1; rSTs:1)
- Caulobacterales (isolates:236; rSTs:203 tree)
- Caulobacteraceae (isolates:235; rSTs:202 tree)
- Aquidulcibacter (isolates:1; rSTs:1)
- Aquidulcibacter paucihalophilus (isolates:1; rSTs:1)
- Asticcacaulis (isolates:25; rSTs:22 tree)
- Asticcacaulis aquaticus (isolates:1; rSTs:1)
- Asticcacaulis benevestitus (isolates:2; rSTs:1)
- Asticcacaulis biprosthecium (isolates:1; rSTs:1)
- Asticcacaulis currens (isolates:1; rSTs:1)
- Asticcacaulis endophyticus (isolates:1; rSTs:1)
- Asticcacaulis excentricus (isolates:3; rSTs:2)
- Asticcacaulis machinosus (isolates:1; rSTs:1)
- Asticcacaulis solisilvae (isolates:1; rSTs:1)
- Asticcacaulis sp. (isolates:12; rSTs:11 tree)
- Asticcacaulis taihuensis (isolates:1; rSTs:1)
- Asticcacaulis tiandongensis (isolates:1; rSTs:1)
- Brevundimonas (isolates:116; rSTs:101 tree)
- Brevundimonas abyssalis (isolates:1)
- Brevundimonas alba (isolates:1; rSTs:1)
- Brevundimonas albigilva (isolates:2; rSTs:2)
- Brevundimonas aurantiaca (isolates:10; rSTs:6 tree)
- Brevundimonas aveniformis (isolates:1; rSTs:1)
- Brevundimonas bacteroides (isolates:1; rSTs:1)
- Brevundimonas basaltis (isolates:1; rSTs:1)
- Brevundimonas bullata (isolates:4; rSTs:2)
- Brevundimonas denitrificans (isolates:1; rSTs:1)
- Brevundimonas diminuta (isolates:12; rSTs:8 tree)
- Brevundimonas fluminis (isolates:1; rSTs:1)
- Brevundimonas fontaquae (isolates:1; rSTs:1)
- Brevundimonas goettingensis (isolates:1; rSTs:1)
- Brevundimonas guildfordensis (isolates:1; rSTs:1)
- Brevundimonas halotolerans (isolates:2; rSTs:1)
- Brevundimonas huaxiensis (isolates:1; rSTs:1)
- Brevundimonas intermedia (isolates:1; rSTs:1)
- Brevundimonas lenta (isolates:1; rSTs:1)
- Brevundimonas lutea (isolates:1; rSTs:1)
- Brevundimonas mediterranea (isolates:2; rSTs:2)
- Brevundimonas naejangsanensis (isolates:3; rSTs:3 tree)
- Brevundimonas nasdae (isolates:4; rSTs:2)
- Brevundimonas pishanensis (isolates:1; rSTs:1)
- Brevundimonas poindexterae (isolates:1; rSTs:1)
- Brevundimonas pondensis (isolates:1; rSTs:1)
- Brevundimonas sp. (isolates:45; rSTs:44 tree)
- Brevundimonas subvibrioides (isolates:1; rSTs:1)
- Brevundimonas terrae (isolates:1; rSTs:1)
- Brevundimonas vancanneytii (isolates:1; rSTs:1)
- Brevundimonas variabilis (isolates:1; rSTs:1)
- Brevundimonas vesicularis (isolates:9; rSTs:9 tree)
- Brevundimonas viscosa (isolates:1; rSTs:1)
- Brevundimonas vitisensis (isolates:1; rSTs:1)
- Caulobacter (isolates:70; rSTs:60 tree)
- Caulobacter endophyticus (isolates:1; rSTs:1)
- Caulobacter flavus (isolates:2; rSTs:1)
- Caulobacter ginsengisoli (isolates:1; rSTs:1)
- Caulobacter henricii (isolates:1; rSTs:2)
- Caulobacter hibisci (isolates:1; rSTs:1)
- Caulobacter mirabilis (isolates:1; rSTs:1)
- Caulobacter radicis (isolates:2; rSTs:2)
- Caulobacter rhizosphaerae (isolates:4; rSTs:3 tree)
- Caulobacter segnis (isolates:3; rSTs:2)
- Caulobacter soli (isolates:1; rSTs:1)
- Caulobacter sp. (isolates:43; rSTs:40 tree)
- Caulobacter vibrioides (isolates:9; rSTs:4 tree)
- Caulobacter zeae (isolates:1; rSTs:1)
- Phenylobacterium (isolates:21; rSTs:17 tree)
- Phenylobacterium aquaticum (isolates:1; rSTs:1)
- Phenylobacterium deserti (isolates:1; rSTs:1)
- Phenylobacterium glaciei (isolates:1; rSTs:1)
- Phenylobacterium haematophilum (isolates:1; rSTs:1)
- Phenylobacterium hankyongense (isolates:1; rSTs:1)
- Phenylobacterium immobile (isolates:1; rSTs:1)
- Phenylobacterium kunshanense (isolates:1; rSTs:1)
- Phenylobacterium parvum (isolates:1; rSTs:1)
- Phenylobacterium soli (isolates:1; rSTs:1)
- Phenylobacterium sp. (isolates:11; rSTs:7 tree)
- Phenylobacterium zucineum (isolates:1; rSTs:1)
- Pseudaquidulcibacter (isolates:1; rSTs:1)
- Pseudaquidulcibacter saccharophilus (isolates:1; rSTs:1)
- Terricaulis (isolates:1)
- Terricaulis silvestris (isolates:1)
- Aquidulcibacter (isolates:1; rSTs:1)
- Caulobacteraceae (isolates:235; rSTs:202 tree)
- Emcibacterales (isolates:7; rSTs:5 tree)
- Emcibacteraceae (isolates:6; rSTs:4 tree)
- Emcibacter (isolates:1; rSTs:1)
- Emcibacter nanhaiensis (isolates:1; rSTs:1)
- Luteithermobacter (isolates:1; rSTs:1)
- Luteithermobacter gelatinilyticus (isolates:1; rSTs:1)
- Paremcibacter (isolates:2; rSTs:1)
- Paremcibacter congregatus (isolates:2; rSTs:1)
- Pseudemcibacter (isolates:2; rSTs:1)
- Pseudemcibacter aquimaris (isolates:2; rSTs:1)
- Emcibacter (isolates:1; rSTs:1)
- Govaniaceae (isolates:1; rSTs:1)
- Emcibacteraceae (isolates:6; rSTs:4 tree)
- Futianiales (isolates:1)
- Geminicoccales (isolates:8; rSTs:7 tree)
- Holosporales (isolates:18; rSTs:12 tree)
- Caedimonadaceae (isolates:3; rSTs:3 tree)
- Candidatus Paracaedibacteraceae (isolates:4; rSTs:4 tree)
- Holosporaceae (isolates:11; rSTs:5 tree)
- Candidatus Cytomitobacter (isolates:3)
- Candidatus Hepatobacter (isolates:1; rSTs:1)
- Candidatus Hepatobacter penaei (isolates:1; rSTs:1)
- Candidatus Hydrogenosomobacter (isolates:1)
- Candidatus Hydrogenosomobacter endosymbioticus (isolates:1)
- Candidatus Nesciobacter (isolates:2)
- Candidatus Nesciobacter abundans (isolates:2)
- Holospora (isolates:4; rSTs:4 tree)
- Hyphomicrobiales (isolates:6537; rSTs:4014)
- Aestuariivirgaceae (isolates:1; rSTs:1)
- Afifellaceae (isolates:10; rSTs:6 tree)
- Ahrensiaceae (isolates:3; rSTs:2)
- Alsobacteraceae (isolates:3; rSTs:3 tree)
- Amorphaceae (isolates:10; rSTs:9 tree)
- Ancalomicrobiaceae (isolates:4; rSTs:3 tree)
- Aurantimonadaceae (isolates:94; rSTs:73 tree)
- Antarcticirhabdus (isolates:1; rSTs:1)
- Antarcticirhabdus aurantiaca (isolates:1; rSTs:1)
- Aurantimonas (isolates:21; rSTs:12 tree)
- Aurantimonas aggregata (isolates:1; rSTs:1)
- Aurantimonas coralicida (isolates:4; rSTs:3 tree)
- Aurantimonas endophytica (isolates:2; rSTs:1)
- Aurantimonas manganoxydans (isolates:2; rSTs:1)
- Aurantimonas marianensis (isolates:1)
- Aurantimonas marina (isolates:1; rSTs:1)
- Aurantimonas sp. (isolates:10; rSTs:5 tree)
- Aureimonas (isolates:41; rSTs:33 tree)
- Aureimonas altamirensis (isolates:7; rSTs:5 tree)
- Aureimonas endophytica (isolates:1; rSTs:1)
- Aureimonas flava (isolates:1; rSTs:1)
- Aureimonas fodinaquatilis (isolates:1; rSTs:1)
- Aureimonas frigidaquae (isolates:1; rSTs:1)
- Aureimonas glaciei (isolates:1; rSTs:1)
- Aureimonas jatrophae (isolates:2; rSTs:1)
- Aureimonas leprariae (isolates:1; rSTs:1)
- Aureimonas mangrovi (isolates:1; rSTs:1)
- Aureimonas phyllosphaerae (isolates:3; rSTs:1)
- Aureimonas populi (isolates:1; rSTs:1)
- Aureimonas psammosilenae (isolates:1; rSTs:1)
- Aureimonas pseudogalii (isolates:1; rSTs:1)
- Aureimonas sp. (isolates:16; rSTs:14 tree)
- Aureimonas ureilytica (isolates:3; rSTs:2)
- Consotaella (isolates:2; rSTs:1)
- Fulvimarina (isolates:5; rSTs:4 tree)
- Jiella (isolates:9; rSTs:8 tree)
- Mangrovicella (isolates:1; rSTs:1)
- Mangrovicella endophytica (isolates:1; rSTs:1)
- Martelella (isolates:14; rSTs:13 tree)
- Antarcticirhabdus (isolates:1; rSTs:1)
- Bartonellaceae (isolates:291; rSTs:185 tree)
- Bartonella (isolates:291; rSTs:185 tree)
- Bartonella alsatica (isolates:4; rSTs:1)
- Bartonella ancashensis (isolates:1; rSTs:1)
- Bartonella apihabitans (isolates:7; rSTs:7 tree)
- Bartonella apis (isolates:7; rSTs:7 tree)
- Bartonella australis (isolates:10; rSTs:1)
- Bartonella bacilliformis (isolates:17; rSTs:9 tree)
- Bartonella birtlesii (isolates:5; rSTs:3 tree)
- Bartonella bovis (isolates:7; rSTs:3 tree)
- Bartonella callosciuri (isolates:1; rSTs:1)
- Bartonella capreoli (isolates:1; rSTs:1)
- Bartonella choladocola (isolates:3; rSTs:3 tree)
- Bartonella chomelii (isolates:1; rSTs:1)
- Bartonella clarridgeiae (isolates:2; rSTs:2)
- Bartonella doshiae (isolates:9; rSTs:3 tree)
- Bartonella elizabethae (isolates:7; rSTs:3 tree)
- Bartonella florencae (isolates:1; rSTs:1)
- Bartonella fuyuanensis (isolates:1; rSTs:1)
- Bartonella gabonensis (isolates:1; rSTs:1)
- Bartonella gliris (isolates:1; rSTs:1)
- Bartonella grahamii (isolates:8; rSTs:7 tree)
- Bartonella harrusi (isolates:1; rSTs:1)
- Bartonella henselae (isolates:55; rSTs:26 tree)
- Bartonella koehlerae (isolates:2; rSTs:1)
- Bartonella kosoyi (isolates:1; rSTs:1)
- Bartonella krasnovii (isolates:15; rSTs:12 tree)
- Bartonella machadoae (isolates:1; rSTs:1)
- Bartonella massiliensis (isolates:1; rSTs:1)
- Bartonella mastomydis (isolates:1; rSTs:1)
- Bartonella melophagi (isolates:1; rSTs:1)
- Bartonella phoceensis (isolates:1; rSTs:1)
- Bartonella queenslandensis (isolates:2; rSTs:2)
- Bartonella quintana (isolates:24; rSTs:12 tree)
- Bartonella raoultii (isolates:2; rSTs:2)
- Bartonella rattaustraliani (isolates:1; rSTs:1)
- Bartonella rattimassiliensis (isolates:2; rSTs:1)
- Bartonella refiksaydamii (isolates:1; rSTs:1)
- Bartonella rochalimae (isolates:1; rSTs:1)
- Bartonella saheliensis (isolates:1; rSTs:1)
- Bartonella schoenbuchensis (isolates:3; rSTs:2)
- Bartonella senegalensis (isolates:1; rSTs:1)
- Bartonella sp. (isolates:47; rSTs:34 tree)
- Bartonella tamiae (isolates:2; rSTs:2)
- Bartonella taylorii (isolates:9; rSTs:6 tree)
- Bartonella tribocorum (isolates:8; rSTs:5 tree)
- Bartonella vinsonii (isolates:10; rSTs:9 tree)
- Bartonella washoeensis (isolates:4; rSTs:2)
- Bartonella (isolates:291; rSTs:185 tree)
- Beijerinckiaceae (isolates:27; rSTs:22 tree)
- Beijerinckia (isolates:3; rSTs:2)
- Methylocapsa (isolates:4; rSTs:4 tree)
- Methylocella (isolates:3; rSTs:3 tree)
- Methyloferula (isolates:1; rSTs:1)
- Methyloferula stellata (isolates:1; rSTs:1)
- Methylovirgula (isolates:3; rSTs:2)
- Pseudochelatococcus (isolates:2; rSTs:2)
- Rhodoblastus (isolates:11; rSTs:8 tree)
- Blastochloridaceae (isolates:5; rSTs:3 tree)
- Boseaceae (isolates:66; rSTs:51 tree)
- Bosea (isolates:66; rSTs:51 tree)
- Bosea caraganae (isolates:2; rSTs:1)
- Bosea lathyri (isolates:1; rSTs:1)
- Bosea lupini (isolates:1; rSTs:2)
- Bosea minatitlanensis (isolates:1; rSTs:1)
- Bosea psychrotolerans (isolates:1; rSTs:1)
- Bosea robiniae (isolates:1; rSTs:1)
- Bosea sp. (isolates:53; rSTs:39 tree)
- Bosea spartocytisi (isolates:2; rSTs:1)
- Bosea thiooxidans (isolates:2; rSTs:2)
- Bosea vaviloviae (isolates:1; rSTs:1)
- Bosea vestrisii (isolates:1; rSTs:1)
- Bosea (isolates:66; rSTs:51 tree)
- Breoghaniaceae (isolates:2; rSTs:2)
- Brucellaceae (isolates:1351; rSTs:341 tree)
- Brucella (isolates:1329; rSTs:325 tree)
- Brucella abortus (isolates:407; rSTs:65 tree)
- Brucella anthropi (isolates:15; rSTs:12 tree)
- Brucella canis (isolates:47; rSTs:8 tree)
- Brucella ceti (isolates:6; rSTs:1)
- Brucella cytisi (isolates:2; rSTs:2)
- Brucella daejeonensis (isolates:1; rSTs:1)
- Brucella endophytica (isolates:1; rSTs:1)
- Brucella gallinifaecis (isolates:1; rSTs:1)
- Brucella grignonensis (isolates:1; rSTs:1)
- Brucella haematophila (isolates:1; rSTs:1)
- Brucella inopinata (isolates:3; rSTs:3 tree)
- Brucella intermedia (isolates:40; rSTs:35 tree)
- Brucella lupini (isolates:2; rSTs:1)
- Brucella melitensis (isolates:601; rSTs:86 tree)
- Brucella microti (isolates:2; rSTs:1)
- Brucella neotomae (isolates:6; rSTs:1)
- Brucella oryzae (isolates:3; rSTs:1)
- Brucella ovis (isolates:19; rSTs:5 tree)
- Brucella pecoris (isolates:3; rSTs:1)
- Brucella pinnipedialis (isolates:7; rSTs:3 tree)
- Brucella pituitosa (isolates:5; rSTs:4 tree)
- Brucella pseudintermedia (isolates:3; rSTs:3 tree)
- Brucella pseudogrignonensis (isolates:9; rSTs:7 tree)
- Brucella rhizosphaerae (isolates:1; rSTs:1)
- Brucella sp. (isolates:63; rSTs:57 tree)
- Brucella suis (isolates:65; rSTs:9 tree)
- Brucella thiophenivorans (isolates:1; rSTs:1)
- Brucella tritici (isolates:6; rSTs:6 tree)
- Brucella vulpis (isolates:2; rSTs:1)
- [Ochrobactrum] quorumnocens (isolates:2; rSTs:2)
- [Ochrobactrum] soli (isolates:3; rSTs:3 tree)
- [Ochrobactrum] teleogrylli (isolates:1; rSTs:1)
- Falsochrobactrum (isolates:3; rSTs:3 tree)
- Ochrobactrum (isolates:1; rSTs:1)
- Candidatus Ochrobactrum gambitense (isolates:1; rSTs:1)
- Paenochrobactrum (isolates:1; rSTs:1)
- Paenochrobactrum gallinarii (isolates:1; rSTs:1)
- Pseudochrobactrum (isolates:17; rSTs:11 tree)
- Brucella (isolates:1329; rSTs:325 tree)
- Chelatococcaceae (isolates:21; rSTs:15 tree)
- Camelimonas (isolates:2; rSTs:2)
- Chelatococcus (isolates:19; rSTs:13 tree)
- Chelatococcus asaccharovorans (isolates:4; rSTs:2)
- Chelatococcus caeni (isolates:1; rSTs:1)
- Chelatococcus composti (isolates:3; rSTs:1)
- Chelatococcus daeguensis (isolates:2; rSTs:1)
- Chelatococcus reniformis (isolates:1; rSTs:1)
- Chelatococcus sambhunathii (isolates:2; rSTs:1)
- Chelatococcus sp. (isolates:6; rSTs:6 tree)
- Cohaesibacteraceae (isolates:7; rSTs:6 tree)
- Devosiaceae (isolates:99; rSTs:86 tree)
- Arsenicitalea (isolates:1; rSTs:1)
- Arsenicitalea aurantiaca (isolates:1; rSTs:1)
- Cucumibacter (isolates:2; rSTs:1)
- Cucumibacter marinus (isolates:2; rSTs:1)
- Devosia (isolates:71; rSTs:64 tree)
- Devosia algicola (isolates:1)
- Devosia aquimaris (isolates:1)
- Devosia aurantiaca (isolates:1; rSTs:1)
- Devosia beringensis (isolates:1; rSTs:1)
- Devosia chinhatensis (isolates:1; rSTs:1)
- Devosia crocina (isolates:1; rSTs:1)
- Devosia elaeis (isolates:1; rSTs:1)
- Devosia enhydra (isolates:1; rSTs:1)
- Devosia epidermidihirudinis (isolates:1; rSTs:1)
- Devosia equisanguinis (isolates:1; rSTs:1)
- Devosia faecipullorum (isolates:1; rSTs:1)
- Devosia geojensis (isolates:1; rSTs:1)
- Devosia ginsengisoli (isolates:1; rSTs:1)
- Devosia indica (isolates:1; rSTs:1)
- Devosia insulae (isolates:1; rSTs:1)
- Devosia lacusdianchii (isolates:1)
- Devosia limi (isolates:2; rSTs:1)
- Devosia litorisediminis (isolates:1; rSTs:1)
- Devosia lucknowensis (isolates:1; rSTs:1)
- Devosia marina (isolates:1; rSTs:1)
- Devosia naphthalenivorans (isolates:1; rSTs:1)
- Devosia neptuniae (isolates:1; rSTs:1)
- Devosia nitrariae (isolates:1; rSTs:1)
- Devosia oryziradicis (isolates:1; rSTs:1)
- Devosia oryzisoli (isolates:1; rSTs:1)
- Devosia pacifica (isolates:1; rSTs:1)
- Devosia psychrophila (isolates:2; rSTs:1)
- Devosia rhizoryzae (isolates:1; rSTs:1)
- Devosia rhodophyticola (isolates:1)
- Devosia riboflavina (isolates:1; rSTs:1)
- Devosia salina (isolates:1; rSTs:1)
- Devosia sediminis (isolates:1; rSTs:1)
- Devosia soli (isolates:1; rSTs:1)
- Devosia sp. (isolates:30; rSTs:30 tree)
- Devosia subaequoris (isolates:2; rSTs:1)
- Devosia submarina (isolates:1; rSTs:1)
- Devosia ureilytica (isolates:2; rSTs:2)
- Devosia yakushimensis (isolates:1; rSTs:1)
- Mariluticola (isolates:1)
- Mariluticola halotolerans (isolates:1)
- Maritalea (isolates:5; rSTs:5 tree)
- Paradevosia (isolates:2; rSTs:2)
- Paradevosia shaoguanensis (isolates:2; rSTs:2)
- Pelagibacterium (isolates:15; rSTs:12 tree)
- Pelagibacterium flavum (isolates:1)
- Pelagibacterium halotolerans (isolates:3; rSTs:1)
- Pelagibacterium lacus (isolates:1; rSTs:1)
- Pelagibacterium lentulum (isolates:2; rSTs:1)
- Pelagibacterium limicola (isolates:1; rSTs:1)
- Pelagibacterium luteolum (isolates:1; rSTs:1)
- Pelagibacterium montanilacus (isolates:1; rSTs:1)
- Pelagibacterium sediminicola (isolates:1; rSTs:1)
- Pelagibacterium sp. (isolates:3; rSTs:4 tree)
- Pelagibacterium xiamenense (isolates:1; rSTs:1)
- Youhaiella (isolates:2; rSTs:1)
- Youhaiella tibetensis (isolates:2; rSTs:1)
- Arsenicitalea (isolates:1; rSTs:1)
- Hyphomicrobiaceae (isolates:48; rSTs:39 tree)
- Dichotomicrobium (isolates:1; rSTs:1)
- Dichotomicrobium thermohalophilum (isolates:1; rSTs:1)
- Filomicrobium (isolates:3; rSTs:1)
- Hyphomicrobium (isolates:19; rSTs:18 tree)
- Hyphomicrobium album (isolates:1; rSTs:1)
- Hyphomicrobium denitrificans (isolates:2; rSTs:2)
- Hyphomicrobium facile (isolates:1; rSTs:1)
- Hyphomicrobium methylovorum (isolates:1; rSTs:1)
- Hyphomicrobium nitrativorans (isolates:1; rSTs:1)
- Hyphomicrobium sp. (isolates:9; rSTs:9 tree)
- Hyphomicrobium sulfonivorans (isolates:3; rSTs:2)
- Hyphomicrobium zavarzinii (isolates:1; rSTs:1)
- Limoniibacter (isolates:1; rSTs:1)
- Limoniibacter endophyticus (isolates:1; rSTs:1)
- Methyloceanibacter (isolates:6; rSTs:5 tree)
- Methyloligella (isolates:3; rSTs:2)
- Rhodomicrobium (isolates:7; rSTs:5 tree)
- Rhodoplanes (isolates:8; rSTs:6 tree)
- Dichotomicrobium (isolates:1; rSTs:1)
- Kaistiaceae (isolates:21; rSTs:17 tree)
- Bauldia (isolates:1; rSTs:1)
- Bauldia litoralis (isolates:1; rSTs:1)
- Kaistia (isolates:15; rSTs:12 tree)
- Kaistia adipata (isolates:1; rSTs:1)
- Kaistia algarum (isolates:1; rSTs:1)
- Kaistia dalseonensis (isolates:2; rSTs:1)
- Kaistia defluvii (isolates:1; rSTs:1)
- Kaistia geumhonensis (isolates:2; rSTs:1)
- Kaistia granuli (isolates:1; rSTs:1)
- Kaistia hirudinis (isolates:1; rSTs:1)
- Kaistia nematophila (isolates:1; rSTs:1)
- Kaistia soli (isolates:1; rSTs:1)
- Kaistia sp. (isolates:3; rSTs:2)
- Kaistia terrae (isolates:1; rSTs:1)
- Prosthecomicrobium (isolates:5; rSTs:4 tree)
- Bauldia (isolates:1; rSTs:1)
- Lichenibacteriaceae (isolates:3; rSTs:3 tree)
- Lichenihabitantaceae (isolates:4; rSTs:4 tree)
- Methylobacteriaceae (isolates:322; rSTs:258 tree)
- Enterovirga (isolates:2; rSTs:2)
- Methylobacterium (isolates:222; rSTs:175 tree)
- Methylobacterium adhaesivum (isolates:2; rSTs:1)
- Methylobacterium aerolatum (isolates:2; rSTs:1)
- Methylobacterium ajmalii (isolates:3; rSTs:1)
- Methylobacterium aquaticum (isolates:1; rSTs:1)
- Methylobacterium brachiatum (isolates:5; rSTs:4 tree)
- Methylobacterium brachythecii (isolates:2; rSTs:1)
- Methylobacterium bullatum (isolates:2; rSTs:1)
- Methylobacterium cerastii (isolates:1; rSTs:1)
- Methylobacterium crusticola (isolates:2; rSTs:1)
- Methylobacterium currus (isolates:3; rSTs:2)
- Methylobacterium dankookense (isolates:2; rSTs:1)
- Methylobacterium durans (isolates:2; rSTs:2)
- Methylobacterium frigidaeris (isolates:2; rSTs:1)
- Methylobacterium fujisawaense (isolates:2; rSTs:2)
- Methylobacterium gnaphalii (isolates:3; rSTs:1)
- Methylobacterium goesingense (isolates:2; rSTs:2)
- Methylobacterium gossipiicola (isolates:1; rSTs:1)
- Methylobacterium gregans (isolates:3; rSTs:1)
- Methylobacterium haplocladii (isolates:2; rSTs:1)
- Methylobacterium hispanicum (isolates:2; rSTs:2)
- Methylobacterium indicum (isolates:7; rSTs:4 tree)
- Methylobacterium iners (isolates:1; rSTs:1)
- Methylobacterium isbiliense (isolates:2; rSTs:1)
- Methylobacterium longum (isolates:2; rSTs:1)
- Methylobacterium marchantiae (isolates:1; rSTs:1)
- Methylobacterium mesophilicum (isolates:1; rSTs:1)
- Methylobacterium nodulans (isolates:2; rSTs:2)
- Methylobacterium nonmethylotrophicum (isolates:1; rSTs:1)
- Methylobacterium organophilum (isolates:1; rSTs:1)
- Methylobacterium oryzae (isolates:1; rSTs:1)
- Methylobacterium oryzihabitans (isolates:1; rSTs:1)
- Methylobacterium oxalidis (isolates:3; rSTs:1)
- Methylobacterium persicinum (isolates:2; rSTs:1)
- Methylobacterium phyllosphaerae (isolates:2; rSTs:1)
- Methylobacterium phyllostachyos (isolates:1; rSTs:1)
- Methylobacterium planeticum (isolates:1; rSTs:1)
- Methylobacterium platani (isolates:2; rSTs:1)
- Methylobacterium pseudosasicola (isolates:1; rSTs:1)
- Methylobacterium radiodurans (isolates:1; rSTs:1)
- Methylobacterium radiotolerans (isolates:7; rSTs:6 tree)
- Methylobacterium segetis (isolates:1; rSTs:1)
- Methylobacterium soli (isolates:2; rSTs:1)
- Methylobacterium sp. (isolates:125; rSTs:107 tree)
- Methylobacterium symbioticum (isolates:1; rSTs:1)
- Methylobacterium tardum (isolates:3; rSTs:2)
- Methylobacterium tarhaniae (isolates:1; rSTs:1)
- Methylobacterium terrae (isolates:1; rSTs:1)
- Methylobacterium terricola (isolates:1; rSTs:1)
- Methylobacterium thuringiense (isolates:1; rSTs:1)
- Methylobacterium trifolii (isolates:1; rSTs:1)
- Methylobacterium variabile (isolates:1; rSTs:1)
- Methylorubrum (isolates:42; rSTs:33 tree)
- Methylorubrum aminovorans (isolates:2; rSTs:1)
- Methylorubrum extorquens (isolates:24; rSTs:15 tree)
- Methylorubrum podarium (isolates:1)
- Methylorubrum populi (isolates:2; rSTs:2)
- Methylorubrum rhodesianum (isolates:2; rSTs:2)
- Methylorubrum rhodinum (isolates:2; rSTs:1)
- Methylorubrum salsuginis (isolates:1; rSTs:1)
- Methylorubrum sp. (isolates:5; rSTs:8 tree)
- Methylorubrum suomiense (isolates:1; rSTs:1)
- Methylorubrum thiocyanatum (isolates:1; rSTs:1)
- Methylorubrum zatmanii (isolates:1; rSTs:1)
- Microvirga (isolates:56; rSTs:48 tree)
- Microvirga aerilata (isolates:1; rSTs:1)
- Microvirga aerophila (isolates:2; rSTs:1)
- Microvirga alba (isolates:1; rSTs:1)
- Microvirga antarctica (isolates:1; rSTs:1)
- Microvirga arabica (isolates:1; rSTs:1)
- Microvirga arsenatis (isolates:2; rSTs:1)
- Microvirga arvi (isolates:1; rSTs:1)
- Microvirga brassicacearum (isolates:1; rSTs:1)
- Microvirga calopogonii (isolates:1; rSTs:1)
- Microvirga flavescens (isolates:1; rSTs:1)
- Microvirga flocculans (isolates:2; rSTs:1)
- Microvirga guangxiensis (isolates:1; rSTs:1)
- Microvirga lenta (isolates:1; rSTs:1)
- Microvirga lotononidis (isolates:2; rSTs:1)
- Microvirga lupini (isolates:1; rSTs:1)
- Microvirga makkahensis (isolates:1; rSTs:1)
- Microvirga massiliensis (isolates:3; rSTs:1)
- Microvirga mediterraneensis (isolates:1; rSTs:1)
- Microvirga ossetica (isolates:1; rSTs:1)
- Microvirga pakistanensis (isolates:1; rSTs:1)
- Microvirga pudoricolor (isolates:1; rSTs:1)
- Microvirga puerhi (isolates:1; rSTs:1)
- Microvirga rosea (isolates:1; rSTs:1)
- Microvirga roseola (isolates:1; rSTs:1)
- Microvirga soli (isolates:1; rSTs:1)
- Microvirga solisilvae (isolates:1; rSTs:1)
- Microvirga sp. (isolates:14; rSTs:13 tree)
- Microvirga splendida (isolates:1; rSTs:1)
- Microvirga subterranea (isolates:1; rSTs:1)
- Microvirga terrae (isolates:1; rSTs:1)
- Microvirga terrestris (isolates:1; rSTs:1)
- Microvirga terricola (isolates:1; rSTs:1)
- Microvirga thermotolerans (isolates:1; rSTs:1)
- Microvirga tunisiensis (isolates:2; rSTs:1)
- Microvirga vignae (isolates:1; rSTs:1)
- Microvirga zambiensis (isolates:1; rSTs:1)
- Methylocystaceae (isolates:61; rSTs:51 tree)
- Hansschlegelia (isolates:4; rSTs:4 tree)
- Methylocystis (isolates:32; rSTs:25 tree)
- Methylocystis bryophila (isolates:2; rSTs:1)
- Methylocystis echinoides (isolates:1; rSTs:1)
- Methylocystis heyeri (isolates:1; rSTs:2)
- Methylocystis hirsuta (isolates:1; rSTs:1)
- Methylocystis iwaonis (isolates:2; rSTs:2)
- Methylocystis parvus (isolates:3; rSTs:1)
- Methylocystis rosea (isolates:3; rSTs:3 tree)
- Methylocystis silviterrae (isolates:1; rSTs:1)
- Methylocystis sp. (isolates:17; rSTs:13 tree)
- Methylocystis suflitae (isolates:1)
- Methylopila (isolates:7; rSTs:5 tree)
- Methylosinus (isolates:18; rSTs:17 tree)
- Nitrobacteraceae (isolates:1018; rSTs:638 tree)
- Afipia (isolates:26; rSTs:12 tree)
- Afipia birgiae (isolates:1; rSTs:1)
- Afipia broomeae (isolates:2; rSTs:1)
- Afipia carboxidovorans (isolates:3; rSTs:1)
- Afipia clevelandensis (isolates:1; rSTs:1)
- Afipia felis (isolates:5; rSTs:1)
- Afipia massiliensis (isolates:2; rSTs:2)
- Afipia sp. (isolates:11; rSTs:4 tree)
- [Pseudomonas] carboxydohydrogena (isolates:1; rSTs:1)
- Bradyrhizobium (isolates:932; rSTs:568 tree)
- Bradyrhizobium acaciae (isolates:1; rSTs:1)
- Bradyrhizobium aeschynomenes (isolates:3; rSTs:3 tree)
- Bradyrhizobium agreste (isolates:1; rSTs:1)
- Bradyrhizobium algeriense (isolates:3; rSTs:2)
- Bradyrhizobium altum (isolates:1; rSTs:1)
- Bradyrhizobium amphicarpaeae (isolates:1; rSTs:1)
- Bradyrhizobium arachidis (isolates:4; rSTs:2)
- Bradyrhizobium archetypum (isolates:1; rSTs:1)
- Bradyrhizobium australafricanum (isolates:2; rSTs:2)
- Bradyrhizobium australiense (isolates:1; rSTs:1)
- Bradyrhizobium barranii (isolates:5; rSTs:5 tree)
- Bradyrhizobium betae (isolates:2; rSTs:1)
- Bradyrhizobium brasilense (isolates:7; rSTs:6 tree)
- Bradyrhizobium cajani (isolates:2; rSTs:2)
- Bradyrhizobium campsiandrae (isolates:2; rSTs:1)
- Bradyrhizobium canariense (isolates:19; rSTs:13 tree)
- Bradyrhizobium cenepequi (isolates:1; rSTs:1)
- Bradyrhizobium centrolobii (isolates:1; rSTs:1)
- Bradyrhizobium centrosematis (isolates:2; rSTs:1)
- Bradyrhizobium commune (isolates:1; rSTs:1)
- Bradyrhizobium cosmicum (isolates:2; rSTs:2)
- Bradyrhizobium cytisi (isolates:1; rSTs:1)
- Bradyrhizobium daqingense (isolates:2; rSTs:1)
- Bradyrhizobium denitrificans (isolates:3; rSTs:2)
- Bradyrhizobium diazoefficiens (isolates:43; rSTs:13 tree)
- Bradyrhizobium diversitatis (isolates:1; rSTs:1)
- Bradyrhizobium elkanii (isolates:59; rSTs:16 tree)
- Bradyrhizobium embrapense (isolates:1; rSTs:1)
- Bradyrhizobium erythrophlei (isolates:1; rSTs:1)
- Bradyrhizobium forestalis (isolates:1; rSTs:1)
- Bradyrhizobium frederickii (isolates:2; rSTs:2)
- Bradyrhizobium genosp. L (isolates:1; rSTs:1)
- Bradyrhizobium glycinis (isolates:1; rSTs:1)
- Bradyrhizobium guangdongense (isolates:3; rSTs:1)
- Bradyrhizobium guangxiense (isolates:1; rSTs:1)
- Bradyrhizobium guangzhouense (isolates:3; rSTs:3 tree)
- Bradyrhizobium hereditatis (isolates:1; rSTs:1)
- Bradyrhizobium hipponense (isolates:1; rSTs:1)
- Bradyrhizobium huanghuaihaiense (isolates:1; rSTs:1)
- Bradyrhizobium icense (isolates:1; rSTs:1)
- Bradyrhizobium iriomotense (isolates:2; rSTs:2)
- Bradyrhizobium ivorense (isolates:3; rSTs:3 tree)
- Bradyrhizobium japonicum (isolates:70; rSTs:21 tree)
- Bradyrhizobium jicamae (isolates:1; rSTs:1)
- Bradyrhizobium lablabi (isolates:1; rSTs:1)
- Bradyrhizobium liaoningense (isolates:3; rSTs:3 tree)
- Bradyrhizobium macuxiense (isolates:1; rSTs:1)
- Bradyrhizobium manausense (isolates:1; rSTs:1)
- Bradyrhizobium mercantei (isolates:1; rSTs:1)
- Bradyrhizobium murdochi (isolates:1; rSTs:1)
- Bradyrhizobium nanningense (isolates:2; rSTs:2)
- Bradyrhizobium neotropicale (isolates:1; rSTs:1)
- Bradyrhizobium niftali (isolates:1; rSTs:1)
- Bradyrhizobium nitroreducens (isolates:1; rSTs:1)
- Bradyrhizobium oligotrophicum (isolates:1; rSTs:1)
- Bradyrhizobium oropedii (isolates:1; rSTs:1)
- Bradyrhizobium ottawaense (isolates:10; rSTs:6 tree)
- Bradyrhizobium pachyrhizi (isolates:3; rSTs:3 tree)
- Bradyrhizobium paxllaeri (isolates:1; rSTs:1)
- Bradyrhizobium prioritasuperba (isolates:1; rSTs:1)
- Bradyrhizobium quebecense (isolates:2; rSTs:2)
- Bradyrhizobium retamae (isolates:1; rSTs:1)
- Bradyrhizobium rifense (isolates:1; rSTs:1)
- Bradyrhizobium roseus (isolates:1)
- Bradyrhizobium sacchari (isolates:3; rSTs:1)
- Bradyrhizobium sediminis (isolates:3; rSTs:3 tree)
- Bradyrhizobium semiaridum (isolates:1; rSTs:1)
- Bradyrhizobium septentrionale (isolates:2; rSTs:2)
- Bradyrhizobium shewense (isolates:1; rSTs:1)
- Bradyrhizobium sp. (isolates:579; rSTs:370 tree)
- Bradyrhizobium stylosanthis (isolates:2; rSTs:2)
- Bradyrhizobium symbiodeficiens (isolates:4; rSTs:4 tree)
- Bradyrhizobium tropiciagri (isolates:1; rSTs:1)
- Bradyrhizobium uaiense (isolates:1; rSTs:1)
- Bradyrhizobium valentinum (isolates:2; rSTs:1)
- Bradyrhizobium vignae (isolates:3; rSTs:3 tree)
- Bradyrhizobium viridifuturi (isolates:9; rSTs:2)
- Bradyrhizobium xenonodulans (isolates:1; rSTs:1)
- Bradyrhizobium yuanmingense (isolates:13; rSTs:13 tree)
- Bradyrhizobium zhanjiangense (isolates:4; rSTs:3 tree)
- Bradyrhizobium zhengyangense (isolates:3; rSTs:3 tree)
- Nitrobacter (isolates:8; rSTs:7 tree)
- Rhodopseudomonas (isolates:31; rSTs:32 tree)
- Rhodopseudomonas faecalis (isolates:1; rSTs:1)
- Rhodopseudomonas infernalis (isolates:1; rSTs:1)
- Rhodopseudomonas palustris (isolates:17; rSTs:12 tree)
- Rhodopseudomonas pentothenatexigens (isolates:2; rSTs:1)
- Rhodopseudomonas pseudopalustris (isolates:1; rSTs:1)
- Rhodopseudomonas rhenobacensis (isolates:1; rSTs:1)
- Rhodopseudomonas sp. (isolates:8; rSTs:15 tree)
- Tardiphaga (isolates:17; rSTs:17 tree)
- Undibacter (isolates:1; rSTs:1)
- Undibacter mobilis (isolates:1; rSTs:1)
- Variibacter (isolates:3; rSTs:1)
- Variibacter gotjawalensis (isolates:3; rSTs:1)
- Afipia (isolates:26; rSTs:12 tree)
- Notoacmeibacteraceae (isolates:4; rSTs:4 tree)
- Parvibaculaceae (isolates:13; rSTs:11 tree)
- Anderseniella (isolates:1; rSTs:1)
- Anderseniella sp. (isolates:1; rSTs:1)
- Candidatus Phaeomarinobacter (isolates:1; rSTs:1)
- Candidatus Phaeomarinobacter ectocarpi (isolates:1; rSTs:1)
- Kaustia (isolates:1; rSTs:1)
- Kaustia mangrovi (isolates:1; rSTs:1)
- Parvibaculum (isolates:3; rSTs:3 tree)
- Pyruvatibacter (isolates:3; rSTs:1)
- Pyruvatibacter mobilis (isolates:3; rSTs:1)
- Rhodoligotrophos (isolates:2; rSTs:2)
- Tepidicaulis (isolates:2; rSTs:2)
- Anderseniella (isolates:1; rSTs:1)
- Phreatobacteraceae (isolates:5; rSTs:5 tree)
- Phyllobacteriaceae (isolates:814; rSTs:506 tree)
- Aliihoeflea (isolates:3; rSTs:3 tree)
- Aminobacter (isolates:24; rSTs:18 tree)
- Aminobacter aganoensis (isolates:1; rSTs:1)
- Aminobacter aminovorans (isolates:4; rSTs:2)
- Aminobacter anthyllidis (isolates:2; rSTs:2)
- Aminobacter carboxidus (isolates:1; rSTs:1)
- Aminobacter ciceronei (isolates:2; rSTs:1)
- Aminobacter lissarensis (isolates:1; rSTs:1)
- Aminobacter niigataensis (isolates:2; rSTs:2)
- Aminobacter sp. (isolates:11; rSTs:8 tree)
- Aquamicrobium (isolates:7; rSTs:7 tree)
- Aquibium (isolates:4; rSTs:4 tree)
- Chelativorans (isolates:13; rSTs:12 tree)
- Chelativorans alearense (isolates:1; rSTs:1)
- Chelativorans intermedius (isolates:1; rSTs:1)
- Chelativorans multitrophicus (isolates:1; rSTs:1)
- Chelativorans oligotrophicus (isolates:1; rSTs:1)
- Chelativorans petroleitrophicus (isolates:1; rSTs:1)
- Chelativorans sp. (isolates:7; rSTs:6 tree)
- Chelativorans xinjiangense (isolates:1; rSTs:1)
- Hoeflea (isolates:16; rSTs:13 tree)
- Hoeflea alexandrii (isolates:2; rSTs:1)
- Hoeflea algicola (isolates:1; rSTs:1)
- Hoeflea halophila (isolates:1; rSTs:1)
- Hoeflea marina (isolates:1; rSTs:1)
- Hoeflea olei (isolates:1; rSTs:1)
- Hoeflea phototrophica (isolates:1; rSTs:1)
- Hoeflea poritis (isolates:1; rSTs:1)
- Hoeflea prorocentri (isolates:2; rSTs:1)
- Hoeflea sp. (isolates:5; rSTs:4 tree)
- Hoeflea ulvae (isolates:1; rSTs:1)
- Lentilitoribacter (isolates:1; rSTs:1)
- Lentilitoribacter sp. (isolates:1; rSTs:1)
- Mesorhizobium (isolates:639; rSTs:360 tree)
- Mesorhizobium abyssinicae (isolates:2; rSTs:2)
- Mesorhizobium albiziae (isolates:2; rSTs:1)
- Mesorhizobium alhagi (isolates:1; rSTs:1)
- Mesorhizobium amorphae (isolates:4; rSTs:2)
- Mesorhizobium atlanticum (isolates:1; rSTs:1)
- Mesorhizobium australicum (isolates:1; rSTs:1)
- Mesorhizobium camelthorni (isolates:1; rSTs:1)
- Mesorhizobium caraganae (isolates:1; rSTs:1)
- Mesorhizobium carmichaelinearum (isolates:1; rSTs:1)
- Mesorhizobium ciceri (isolates:9; rSTs:6 tree)
- Mesorhizobium comanense (isolates:1; rSTs:1)
- Mesorhizobium composti (isolates:1; rSTs:1)
- Mesorhizobium delmotii (isolates:1; rSTs:1)
- Mesorhizobium denitrificans (isolates:1; rSTs:1)
- Mesorhizobium ephedrae (isolates:1; rSTs:1)
- Mesorhizobium erdmanii (isolates:2; rSTs:2)
- Mesorhizobium escarrei (isolates:1; rSTs:1)
- Mesorhizobium hawassense (isolates:1; rSTs:1)
- Mesorhizobium helmanticense (isolates:1; rSTs:1)
- Mesorhizobium huakuii (isolates:1; rSTs:1)
- Mesorhizobium hungaricum (isolates:1; rSTs:1)
- Mesorhizobium intechi (isolates:1; rSTs:1)
- Mesorhizobium japonicum (isolates:12; rSTs:3 tree)
- Mesorhizobium jarvisii (isolates:3; rSTs:2)
- Mesorhizobium kowhaii (isolates:1; rSTs:1)
- Mesorhizobium liriopis (isolates:1; rSTs:1)
- Mesorhizobium loti (isolates:1; rSTs:1)
- Mesorhizobium mediterraneum (isolates:2; rSTs:1)
- Mesorhizobium metallidurans (isolates:1; rSTs:1)
- Mesorhizobium microcysteis (isolates:1; rSTs:1)
- Mesorhizobium muleiense (isolates:4; rSTs:3 tree)
- Mesorhizobium neociceri (isolates:1; rSTs:1)
- Mesorhizobium norvegicum (isolates:1; rSTs:1)
- Mesorhizobium onobrychidis (isolates:1; rSTs:1)
- Mesorhizobium opportunistum (isolates:3; rSTs:3 tree)
- Mesorhizobium plurifarium (isolates:4; rSTs:4 tree)
- Mesorhizobium prunaredense (isolates:1; rSTs:1)
- Mesorhizobium qingshengii (isolates:2; rSTs:2)
- Mesorhizobium sangaii (isolates:1; rSTs:1)
- Mesorhizobium sanjuanii (isolates:1; rSTs:1)
- Mesorhizobium sediminum (isolates:1; rSTs:1)
- Mesorhizobium shangrilense (isolates:1; rSTs:1)
- Mesorhizobium silamurunense (isolates:2; rSTs:2)
- Mesorhizobium soli (isolates:2; rSTs:2)
- Mesorhizobium sophorae (isolates:1; rSTs:1)
- Mesorhizobium sp. (isolates:546; rSTs:286 tree)
- Mesorhizobium tamadayense (isolates:1; rSTs:1)
- Mesorhizobium temperatum (isolates:1; rSTs:1)
- Mesorhizobium tianshanense (isolates:2; rSTs:1)
- Mesorhizobium ventifaucium (isolates:1; rSTs:1)
- Mesorhizobium waimense (isolates:1; rSTs:1)
- Mesorhizobium wenxiniae (isolates:1; rSTs:1)
- Mesorhizobium xinjiangense (isolates:1; rSTs:1)
- Mesorhizobium zhangyense (isolates:1; rSTs:1)
- Nitratireductor (isolates:36; rSTs:29 tree)
- Nitratireductor aestuarii (isolates:1; rSTs:1)
- Nitratireductor alexandrii (isolates:1; rSTs:1)
- Nitratireductor aquibiodomus (isolates:4; rSTs:3 tree)
- Nitratireductor aquimarinus (isolates:9; rSTs:5 tree)
- Nitratireductor arenosus (isolates:1; rSTs:1)
- Nitratireductor basaltis (isolates:1; rSTs:1)
- Nitratireductor indicus (isolates:3; rSTs:2)
- Nitratireductor kimnyeongensis (isolates:1; rSTs:1)
- Nitratireductor luteus (isolates:1; rSTs:1)
- Nitratireductor mangrovi (isolates:1; rSTs:1)
- Nitratireductor pacificus (isolates:1; rSTs:1)
- Nitratireductor rhodophyticola (isolates:4; rSTs:3)
- Nitratireductor soli (isolates:1; rSTs:1)
- Nitratireductor sp. (isolates:7; rSTs:7 tree)
- Oceaniradius (isolates:3; rSTs:3 tree)
- Oricola (isolates:5; rSTs:4 tree)
- Oryzicola (isolates:1; rSTs:1)
- Oryzicola mucosus (isolates:1; rSTs:1)
- Paramesorhizobium (isolates:1; rSTs:1)
- Paramesorhizobium deserti (isolates:1; rSTs:1)
- Phyllobacterium (isolates:44; rSTs:36 tree)
- Candidatus Phyllobacterium onerii (isolates:1)
- Phyllobacterium bourgognense (isolates:1; rSTs:1)
- Phyllobacterium brassicacearum (isolates:2; rSTs:1)
- Phyllobacterium calauticae (isolates:1; rSTs:1)
- Phyllobacterium endophyticum (isolates:4; rSTs:2)
- Phyllobacterium ifriqiyense (isolates:1; rSTs:1)
- Phyllobacterium leguminum (isolates:1; rSTs:1)
- Phyllobacterium myrsinacearum (isolates:5; rSTs:2)
- Phyllobacterium pellucidum (isolates:1; rSTs:1)
- Phyllobacterium phragmitis (isolates:1; rSTs:1)
- Phyllobacterium salinisoli (isolates:1; rSTs:1)
- Phyllobacterium sophorae (isolates:1; rSTs:1)
- Phyllobacterium sp. (isolates:21; rSTs:21 tree)
- Phyllobacterium trifolii (isolates:1; rSTs:1)
- Phyllobacterium zundukense (isolates:2; rSTs:1)
- Pseudaminobacter (isolates:6; rSTs:5 tree)
- Pseudohoeflea (isolates:2; rSTs:2)
- Roseitalea (isolates:4; rSTs:2)
- Salaquimonas (isolates:1; rSTs:1)
- Salaquimonas pukyongi (isolates:1; rSTs:1)
- Tianweitania (isolates:3; rSTs:3 tree)
- Zhengella (isolates:1; rSTs:1)
- Zhengella mangrovi (isolates:1; rSTs:1)
- Pleomorphomonadaceae (isolates:22; rSTs:18 tree)
- Chthonobacter (isolates:2; rSTs:2)
- Faunimonas (isolates:1; rSTs:1)
- Faunimonas pinastri (isolates:1; rSTs:1)
- Hartmannibacter (isolates:1; rSTs:1)
- Hartmannibacter diazotrophicus (isolates:1; rSTs:1)
- Methylobrevis (isolates:2; rSTs:2)
- Mongoliimonas (isolates:1; rSTs:1)
- Mongoliimonas terrestris (isolates:1; rSTs:1)
- Oharaeibacter (isolates:3; rSTs:1)
- Oharaeibacter diazotrophicus (isolates:3; rSTs:1)
- Oryzibacter (isolates:1)
- Oryzibacter oryziterrae (isolates:1)
- Pleomorphomonas (isolates:11; rSTs:10 tree)
- Propylenellaceae (isolates:1; rSTs:1)
- Pseudoxanthobacteraceae (isolates:1; rSTs:1)
- Reyranellaceae (isolates:5; rSTs:5 tree)
- Rhabdaerophilaceae (isolates:2; rSTs:2)
- Rhizobiaceae (isolates:1980; rSTs:1469)
- Agrobacterium (isolates:331; rSTs:228 tree)
- Agrobacterium albertimagni (isolates:1; rSTs:1)
- Agrobacterium arsenijevicii (isolates:1; rSTs:1)
- Agrobacterium bohemicum (isolates:2; rSTs:1)
- Agrobacterium burrii (isolates:1; rSTs:1)
- Agrobacterium cavarae (isolates:1; rSTs:1)
- Agrobacterium cucumeris (isolates:1; rSTs:1)
- Agrobacterium deltaense (isolates:3; rSTs:3 tree)
- Agrobacterium fabrum (isolates:32; rSTs:17 tree)
- Agrobacterium genomosp. 13 (isolates:1; rSTs:1)
- Agrobacterium larrymoorei (isolates:5; rSTs:4 tree)
- Agrobacterium leguminum (isolates:5; rSTs:5 tree)
- Agrobacterium pusense (isolates:36; rSTs:26 tree)
- Agrobacterium radiobacter (isolates:17; rSTs:3 tree)
- Agrobacterium rosae (isolates:11; rSTs:9 tree)
- Agrobacterium rubi (isolates:11; rSTs:4 tree)
- Agrobacterium salinitolerans (isolates:14; rSTs:12 tree)
- Agrobacterium sp. (isolates:62; rSTs:78 tree)
- Agrobacterium tomkonis (isolates:5; rSTs:4 tree)
- Agrobacterium tumefaciens (isolates:84; rSTs:37 tree)
- Agrobacterium vaccinii (isolates:2; rSTs:2)
- Agrobacterium vitis (isolates:36; rSTs:17 tree)
- Allorhizobium (isolates:16; rSTs:14 tree)
- Allorhizobium ampelinum (isolates:9; rSTs:8 tree)
- Allorhizobium borbori (isolates:1; rSTs:1)
- Allorhizobium pseudoryzae (isolates:1; rSTs:1)
- Allorhizobium sonneratiae (isolates:1; rSTs:1)
- Allorhizobium taibaishanense (isolates:2; rSTs:1)
- Allorhizobium terrae (isolates:1; rSTs:1)
- Allorhizobium undicola (isolates:1; rSTs:1)
- Ciceribacter (isolates:8; rSTs:7 tree)
- Ectorhizobium (isolates:1; rSTs:1)
- Ectorhizobium quercum (isolates:1; rSTs:1)
- Endobacterium (isolates:2; rSTs:1)
- Endobacterium cereale (isolates:2; rSTs:1)
- Ensifer (isolates:78; rSTs:64 tree)
- Fererhizobium (isolates:2; rSTs:1)
- Fererhizobium litorale (isolates:2; rSTs:1)
- Ferranicluibacter (isolates:1; rSTs:1)
- Ferranicluibacter rubi (isolates:1; rSTs:1)
- Flavimaribacter (isolates:1; rSTs:1)
- Flavimaribacter sediminis (isolates:1; rSTs:1)
- Gellertiella (isolates:1; rSTs:1)
- Gellertiella hungarica (isolates:1; rSTs:1)
- Georhizobium (isolates:1; rSTs:1)
- Georhizobium profundi (isolates:1; rSTs:1)
- Liberibacter (isolates:51; rSTs:19 tree)
- Metarhizobium (isolates:1)
- Metarhizobium album (isolates:1)
- Mycoplana (isolates:4; rSTs:4 tree)
- Neorhizobium (isolates:26; rSTs:33 tree)
- Neorhizobium alkalisoli (isolates:1; rSTs:1)
- Neorhizobium galegae (isolates:5; rSTs:5 tree)
- Neorhizobium huautlense (isolates:1; rSTs:1)
- Neorhizobium lilium (isolates:1; rSTs:1)
- Neorhizobium petrolearium (isolates:3; rSTs:2)
- Neorhizobium sp. (isolates:9; rSTs:17 tree)
- Neorhizobium tomejilense (isolates:4; rSTs:4 tree)
- Neorhizobium vignae (isolates:1; rSTs:1)
- Neorhizobium xiangyangii (isolates:1; rSTs:1)
- Pararhizobium (isolates:8; rSTs:8 tree)
- Pararhizobium antarcticum (isolates:1; rSTs:1)
- Pararhizobium arenae (isolates:1; rSTs:1)
- Pararhizobium capsulatum (isolates:1; rSTs:1)
- Pararhizobium haloflavum (isolates:1; rSTs:1)
- Pararhizobium mangrovi (isolates:1; rSTs:1)
- Pararhizobium polonicum (isolates:1; rSTs:1)
- Pararhizobium qamdonense (isolates:1)
- Pararhizobium sp. (isolates:1; rSTs:2)
- Peteryoungia (isolates:2; rSTs:2)
- Pseudorhizobium (isolates:11; rSTs:8 tree)
- Pseudorhizobium banfieldiae (isolates:1; rSTs:1)
- Pseudorhizobium endolithicum (isolates:1; rSTs:1)
- Pseudorhizobium flavum (isolates:4; rSTs:2)
- Pseudorhizobium halotolerans (isolates:2; rSTs:1)
- Pseudorhizobium marinum (isolates:1; rSTs:1)
- Pseudorhizobium pelagicum (isolates:1; rSTs:1)
- Pseudorhizobium tarimense (isolates:1; rSTs:1)
- Rhizobium (isolates:983; rSTs:838 tree)
- Rhizobium acaciae (isolates:3; rSTs:2)
- Rhizobium acidisoli (isolates:2; rSTs:1)
- Rhizobium aegyptiacum (isolates:1; rSTs:1)
- Rhizobium aethiopicum (isolates:1; rSTs:1)
- Rhizobium alamii (isolates:2; rSTs:1)
- Rhizobium alarense (isolates:1; rSTs:1)
- Rhizobium altiplani (isolates:1; rSTs:1)
- Rhizobium alvei (isolates:1; rSTs:1)
- Rhizobium anhuiense (isolates:10; rSTs:8 tree)
- Rhizobium azibense (isolates:2; rSTs:2)
- Rhizobium bangladeshense (isolates:17; rSTs:13 tree)
- Rhizobium beringeri (isolates:4; rSTs:2)
- Rhizobium binae (isolates:9; rSTs:6 tree)
- Rhizobium brockwellii (isolates:4; rSTs:3 tree)
- Rhizobium calliandrae (isolates:1; rSTs:1)
- Rhizobium cauense (isolates:1; rSTs:1)
- Rhizobium cellulosilyticum (isolates:4; rSTs:2)
- Rhizobium changzhiense (isolates:4; rSTs:4 tree)
- Rhizobium chutanense (isolates:2; rSTs:2)
- Rhizobium cremeum (isolates:2; rSTs:1)
- Rhizobium croatiense (isolates:3; rSTs:3 tree)
- Rhizobium daejeonense (isolates:3; rSTs:1)
- Rhizobium deserti (isolates:1; rSTs:1)
- Rhizobium dioscoreae (isolates:2; rSTs:2)
- Rhizobium ecuadorense (isolates:1; rSTs:1)
- Rhizobium esperanzae (isolates:2; rSTs:2)
- Rhizobium etli (isolates:3; rSTs:3 tree)
- Rhizobium fabae (isolates:2; rSTs:1)
- Rhizobium favelukesii (isolates:4; rSTs:3 tree)
- Rhizobium freirei (isolates:1; rSTs:1)
- Rhizobium gallicum (isolates:2; rSTs:2)
- Rhizobium giardinii (isolates:2; rSTs:1)
- Rhizobium glycinendophyticum (isolates:1; rSTs:1)
- Rhizobium grahamii (isolates:3; rSTs:3 tree)
- Rhizobium hainanense (isolates:1; rSTs:1)
- Rhizobium halophilum (isolates:1; rSTs:1)
- Rhizobium halophytocola (isolates:1; rSTs:1)
- Rhizobium herbae (isolates:1; rSTs:1)
- Rhizobium hidalgonense (isolates:8; rSTs:6 tree)
- Rhizobium indicum (isolates:2; rSTs:2)
- Rhizobium indigoferae (isolates:3; rSTs:1)
- Rhizobium jaguaris (isolates:1; rSTs:1)
- Rhizobium johnstonii (isolates:4; rSTs:1)
- Rhizobium laguerreae (isolates:94; rSTs:72 tree)
- Rhizobium leguminosarum (isolates:105; rSTs:60 tree)
- Rhizobium lemnae (isolates:1; rSTs:1)
- Rhizobium lentis (isolates:27; rSTs:15 tree)
- Rhizobium leucaenae (isolates:5; rSTs:2)
- Rhizobium lusitanum (isolates:5; rSTs:5 tree)
- Rhizobium mayense (isolates:1; rSTs:1)
- Rhizobium mesoamericanum (isolates:3; rSTs:3 tree)
- Rhizobium mesosinicum (isolates:1; rSTs:1)
- Rhizobium metallidurans (isolates:1; rSTs:1)
- Rhizobium miluonense (isolates:1; rSTs:1)
- Rhizobium mongolense (isolates:5; rSTs:3 tree)
- Rhizobium multihospitium (isolates:1; rSTs:1)
- Rhizobium nepotum (isolates:1; rSTs:1)
- Rhizobium oryzicola (isolates:1; rSTs:1)
- Rhizobium oryzihabitans (isolates:1; rSTs:1)
- Rhizobium oryziradicis (isolates:1; rSTs:1)
- Rhizobium paranaense (isolates:1; rSTs:1)
- Rhizobium phaseoli (isolates:26; rSTs:17 tree)
- Rhizobium pisi (isolates:3; rSTs:1)
- Rhizobium populisoli (isolates:1; rSTs:1)
- Rhizobium redzepovicii (isolates:4; rSTs:4 tree)
- Rhizobium rhizogenes (isolates:80; rSTs:50 tree)
- Rhizobium rhizolycopersici (isolates:1; rSTs:1)
- Rhizobium rhizophilum (isolates:1; rSTs:1)
- Rhizobium rhizoryzae (isolates:2; rSTs:1)
- Rhizobium rhododendri (isolates:1; rSTs:1)
- Rhizobium rosettiformans (isolates:4; rSTs:2)
- Rhizobium ruizarguesonis (isolates:149; rSTs:71 tree)
- Rhizobium setariae (isolates:1; rSTs:1)
- Rhizobium skierniewicense (isolates:3; rSTs:2)
- Rhizobium smilacinae (isolates:1; rSTs:1)
- Rhizobium soli (isolates:1; rSTs:1)
- Rhizobium sophorae (isolates:1; rSTs:1)
- Rhizobium sophoriradicis (isolates:3; rSTs:3 tree)
- Rhizobium sp. (isolates:296; rSTs:393 tree)
- Rhizobium straminoryzae (isolates:1; rSTs:1)
- Rhizobium subbaraonis (isolates:1; rSTs:1)
- Rhizobium sullae (isolates:5; rSTs:4 tree)
- Rhizobium terrae (isolates:1; rSTs:1)
- Rhizobium terricola (isolates:1; rSTs:1)
- Rhizobium tibeticum (isolates:3; rSTs:2)
- Rhizobium tropici (isolates:6; rSTs:4 tree)
- Rhizobium tubonense (isolates:1; rSTs:1)
- Rhizobium tumorigenes (isolates:2; rSTs:2)
- Rhizobium vallis (isolates:1; rSTs:1)
- Rhizobium viscosum (isolates:1; rSTs:1)
- Rhizobium wenxiniae (isolates:2; rSTs:1)
- Rhizobium wuzhouense (isolates:1; rSTs:1)
- Shinella (isolates:37; rSTs:29 tree)
- Shinella curvata (isolates:2; rSTs:1)
- Shinella daejeonensis (isolates:1; rSTs:1)
- Shinella fusca (isolates:1; rSTs:1)
- Shinella granuli (isolates:1; rSTs:1)
- Shinella kummerowiae (isolates:2; rSTs:2)
- Shinella lacus (isolates:1; rSTs:1)
- Shinella oryzae (isolates:2; rSTs:2)
- Shinella pollutisoli (isolates:1; rSTs:1)
- Shinella sedimenti (isolates:1; rSTs:1)
- Shinella sp. (isolates:15; rSTs:12 tree)
- Shinella sumterensis (isolates:3; rSTs:2)
- Shinella yambaruensis (isolates:3; rSTs:1)
- Shinella zoogloeoides (isolates:4; rSTs:3 tree)
- Sinorhizobium (isolates:411; rSTs:205 tree)
- Sinorhizobium alkalisoli (isolates:2; rSTs:2)
- Sinorhizobium americanum (isolates:6; rSTs:5 tree)
- Sinorhizobium arboris (isolates:1; rSTs:1)
- Sinorhizobium fredii (isolates:21; rSTs:9 tree)
- Sinorhizobium garamanticum (isolates:1; rSTs:1)
- Sinorhizobium glycinis (isolates:1; rSTs:1)
- Sinorhizobium kostiense (isolates:1; rSTs:1)
- Sinorhizobium medicae (isolates:70; rSTs:36 tree)
- Sinorhizobium meliloti (isolates:281; rSTs:132 tree)
- Sinorhizobium mexicanum (isolates:2; rSTs:1)
- Sinorhizobium numidicum (isolates:2; rSTs:1)
- Sinorhizobium psoraleae (isolates:2; rSTs:2)
- Sinorhizobium saheli (isolates:2; rSTs:1)
- Sinorhizobium shofinae (isolates:1)
- Sinorhizobium sojae (isolates:2; rSTs:1)
- Sinorhizobium sp. (isolates:13; rSTs:9 tree)
- Sinorhizobium terangae (isolates:3; rSTs:2)
- Xaviernesmea (isolates:4; rSTs:3 tree)
- Agrobacterium (isolates:331; rSTs:228 tree)
- Rhodobiaceae (isolates:3; rSTs:2)
- Rhodovibrionaceae (isolates:4; rSTs:3 tree)
- Roseiarcaceae (isolates:1; rSTs:1)
- Salinarimonadaceae (isolates:5; rSTs:4 tree)
- Segnochrobactraceae (isolates:1; rSTs:1)
- Stappiaceae (isolates:105; rSTs:90 tree)
- Hongsoonwoonella (isolates:1; rSTs:1)
- Hongsoonwoonella zoysiae (isolates:1; rSTs:1)
- Labrenzia (isolates:10; rSTs:7 tree)
- Pannonibacter (isolates:14; rSTs:14 tree)
- Pseudovibrio (isolates:30; rSTs:24 tree)
- Pseudovibrio ascidiaceicola (isolates:2; rSTs:2)
- Pseudovibrio axinellae (isolates:2; rSTs:1)
- Pseudovibrio brasiliensis (isolates:2; rSTs:1)
- Pseudovibrio denitrificans (isolates:2; rSTs:1)
- Pseudovibrio exalbescens (isolates:3; rSTs:2)
- Pseudovibrio flavus (isolates:1; rSTs:1)
- Pseudovibrio hongkongensis (isolates:1; rSTs:1)
- Pseudovibrio japonicus (isolates:1; rSTs:1)
- Pseudovibrio sp. (isolates:15; rSTs:13 tree)
- Pseudovibrio stylochi (isolates:1; rSTs:1)
- Roseibium (isolates:31; rSTs:26 tree)
- Roseibium aestuarii (isolates:1; rSTs:1)
- Roseibium aggregatum (isolates:1; rSTs:1)
- Roseibium album (isolates:5; rSTs:3 tree)
- Roseibium alexandrii (isolates:2; rSTs:2)
- Roseibium aquae (isolates:2; rSTs:1)
- Roseibium denhamense (isolates:2; rSTs:1)
- Roseibium hamelinense (isolates:2; rSTs:1)
- Roseibium limicola (isolates:1; rSTs:1)
- Roseibium litorale (isolates:1; rSTs:1)
- Roseibium marinum (isolates:1; rSTs:1)
- Roseibium polysiphoniae (isolates:2; rSTs:2)
- Roseibium salinum (isolates:1)
- Roseibium sediminis (isolates:1; rSTs:1)
- Roseibium sp. (isolates:8; rSTs:9 tree)
- Roseibium suaedae (isolates:1; rSTs:1)
- Stappia (isolates:19; rSTs:18 tree)
- Hongsoonwoonella (isolates:1; rSTs:1)
- Tepidamorphaceae (isolates:3; rSTs:3 tree)
- Xanthobacteraceae (isolates:81; rSTs:63 tree)
- Ancylobacter (isolates:29; rSTs:27 tree)
- Ancylobacter amanitiformis (isolates:1; rSTs:1)
- Ancylobacter aquaticus (isolates:1; rSTs:1)
- Ancylobacter crimeensis (isolates:1; rSTs:1)
- Ancylobacter defluvii (isolates:2; rSTs:1)
- Ancylobacter dichloromethanicus (isolates:2; rSTs:1)
- Ancylobacter koreensis (isolates:1; rSTs:1)
- Ancylobacter lacus (isolates:1; rSTs:1)
- Ancylobacter mangrovi (isolates:2; rSTs:2)
- Ancylobacter moscoviensis (isolates:1; rSTs:1)
- Ancylobacter novellus (isolates:2; rSTs:1)
- Ancylobacter oerskovii (isolates:1; rSTs:1)
- Ancylobacter polymorphus (isolates:2; rSTs:2)
- Ancylobacter pratisalsi (isolates:1; rSTs:1)
- Ancylobacter radicis (isolates:1; rSTs:1)
- Ancylobacter rudongensis (isolates:1; rSTs:1)
- Ancylobacter sonchi (isolates:1; rSTs:1)
- Ancylobacter sp. (isolates:6; rSTs:7 tree)
- Ancylobacter tetraedralis (isolates:1; rSTs:1)
- Ancylobacter vacuolatus (isolates:1; rSTs:1)
- Aquabacter (isolates:4; rSTs:4 tree)
- Azorhizobium (isolates:8; rSTs:5 tree)
- Labrys (isolates:9; rSTs:9 tree)
- Pseudolabrys (isolates:1; rSTs:1)
- Pseudolabrys taiwanensis (isolates:1; rSTs:1)
- Starkeya (isolates:3; rSTs:2 tree)
- Xanthobacter (isolates:27; rSTs:15 tree)
- Xanthobacter agilis (isolates:2; rSTs:1)
- Xanthobacter aminoxidans (isolates:1; rSTs:1)
- Xanthobacter autotrophicus (isolates:1; rSTs:1)
- Xanthobacter dioxanivorans (isolates:1; rSTs:1)
- Xanthobacter flavus (isolates:1; rSTs:1)
- Xanthobacter oligotrophicus (isolates:2; rSTs:1)
- Xanthobacter sp. (isolates:17; rSTs:8 tree)
- Xanthobacter tagetidis (isolates:2; rSTs:1)
- Ancylobacter (isolates:29; rSTs:27 tree)
- Hyphomonadales (isolates:36; rSTs:31 tree)
- Hyphomonadaceae (isolates:36; rSTs:31 tree)
- Candidatus Viadribacter (isolates:1; rSTs:1)
- Candidatus Viadribacter manganicus (isolates:1; rSTs:1)
- Henriciella (isolates:10; rSTs:8 tree)
- Hirschia (isolates:3; rSTs:2)
- Hyphomonas (isolates:20; rSTs:18 tree)
- Hyphomonas adhaerens (isolates:1; rSTs:1)
- Hyphomonas atlantica (isolates:1; rSTs:1)
- Hyphomonas beringensis (isolates:1; rSTs:1)
- Hyphomonas chukchiensis (isolates:1; rSTs:1)
- Hyphomonas hirschiana (isolates:1; rSTs:1)
- Hyphomonas jannaschiana (isolates:1; rSTs:1)
- Hyphomonas johnsonii (isolates:1; rSTs:1)
- Hyphomonas oceanitis (isolates:1; rSTs:1)
- Hyphomonas pacifica (isolates:3; rSTs:2)
- Hyphomonas polymorpha (isolates:1; rSTs:1)
- Hyphomonas sediminis (isolates:1; rSTs:1)
- Hyphomonas sp. (isolates:7; rSTs:6 tree)
- Ponticaulis (isolates:1; rSTs:1)
- Ponticaulis koreensis (isolates:1; rSTs:1)
- Vitreimonas (isolates:1; rSTs:1)
- Vitreimonas flagellata (isolates:1; rSTs:1)
- Candidatus Viadribacter (isolates:1; rSTs:1)
- Hyphomonadaceae (isolates:36; rSTs:31 tree)
- Iodidimonadales (isolates:7; rSTs:5 tree)
- Kordiimonadales (isolates:16; rSTs:14 tree)
- Kordiimonadaceae (isolates:14; rSTs:12 tree)
- Eilatimonas (isolates:1; rSTs:1)
- Eilatimonas milleporae (isolates:1; rSTs:1)
- Kordiimonas (isolates:12; rSTs:11 tree)
- Kordiimonas aestuarii (isolates:1; rSTs:1)
- Kordiimonas aquimaris (isolates:1; rSTs:1)
- Kordiimonas gwangyangensis (isolates:2; rSTs:2)
- Kordiimonas lacus (isolates:2; rSTs:1)
- Kordiimonas laminariae (isolates:1; rSTs:1)
- Kordiimonas lipolytica (isolates:1; rSTs:1)
- Kordiimonas marina (isolates:1; rSTs:1)
- Kordiimonas pumila (isolates:1; rSTs:1)
- Kordiimonas sediminis (isolates:1; rSTs:1)
- Kordiimonas sp. (isolates:1; rSTs:1)
- Pseudokordiimonas (isolates:1)
- Pseudokordiimonas caeni (isolates:1)
- Eilatimonas (isolates:1; rSTs:1)
- Temperatibacteraceae (isolates:2; rSTs:2)
- Kordiimonadaceae (isolates:14; rSTs:12 tree)
- Magnetococcales (isolates:4; rSTs:4 tree)
- Maricaulales (isolates:37; rSTs:30 tree)
- Maricaulaceae (isolates:30; rSTs:23 tree)
- Alkalicaulis (isolates:1; rSTs:1)
- Alkalicaulis satelles (isolates:1; rSTs:1)
- Euryhalocaulis (isolates:1; rSTs:1)
- Euryhalocaulis caribicus (isolates:1; rSTs:1)
- Glycocaulis (isolates:3; rSTs:2)
- Hyphobacterium (isolates:4; rSTs:1)
- Maricaulis (isolates:7; rSTs:7 tree)
- Marinicauda (isolates:7; rSTs:4 tree)
- Oceanicaulis (isolates:6; rSTs:6 tree)
- Woodsholea (isolates:1; rSTs:1)
- Woodsholea maritima (isolates:1; rSTs:1)
- Alkalicaulis (isolates:1; rSTs:1)
- Robiginitomaculaceae (isolates:7; rSTs:7 tree)
- Maricaulaceae (isolates:30; rSTs:23 tree)
- Micropepsales (isolates:4; rSTs:3 tree)
- Minwuiales (isolates:6; rSTs:3 tree)
- Parvularculales (isolates:16; rSTs:12 tree)
- Parvularculaceae (isolates:16; rSTs:12 tree)
- Amphiplicatus (isolates:2; rSTs:1)
- Amphiplicatus metriothermophilus (isolates:2; rSTs:1)
- Aquisalinus (isolates:5; rSTs:2)
- Hyphococcus (isolates:1; rSTs:1)
- Hyphococcus flavus (isolates:1; rSTs:1)
- Marinicaulis (isolates:1; rSTs:1)
- Marinicaulis flavus (isolates:1; rSTs:1)
- Parvularcula (isolates:7; rSTs:7 tree)
- Parvularcula bermudensis (isolates:1; rSTs:1)
- Parvularcula dongshanensis (isolates:1; rSTs:1)
- Parvularcula lutaonensis (isolates:1; rSTs:1)
- Parvularcula marina (isolates:1; rSTs:1)
- Parvularcula maris (isolates:1; rSTs:1)
- Parvularcula mediterranea (isolates:1; rSTs:1)
- Parvularcula oceani (isolates:1; rSTs:1)
- Amphiplicatus (isolates:2; rSTs:1)
- Parvularculaceae (isolates:16; rSTs:12 tree)
- Rhodobacterales (isolates:1931; rSTs:1423)
- Neomegalonemataceae (isolates:1; rSTs:1)
- Paracoccaceae (isolates:799; rSTs:609 tree)
- Abyssibius (isolates:1; rSTs:1)
- Abyssibius alkaniclasticus (isolates:1; rSTs:1)
- Acidimangrovimonas (isolates:1; rSTs:1)
- Acidimangrovimonas sediminis (isolates:1; rSTs:1)
- Aestuariivita (isolates:1; rSTs:1)
- Aestuariivita boseongensis (isolates:1; rSTs:1)
- Agaricicola (isolates:1; rSTs:1)
- Agaricicola taiwanensis (isolates:1; rSTs:1)
- Albibacillus (isolates:1; rSTs:1)
- Albibacillus kandeliae (isolates:1; rSTs:1)
- Albidovulum (isolates:1; rSTs:1)
- Albidovulum inexpectatum (isolates:1; rSTs:1)
- Albimonas (isolates:3; rSTs:3 tree)
- Alexandriicola (isolates:1; rSTs:1)
- Alexandriicola marinus (isolates:1; rSTs:1)
- Algicella (isolates:1; rSTs:1)
- Algicella marina (isolates:1; rSTs:1)
- Aliiroseovarius (isolates:44; rSTs:31 tree)
- Aliiroseovarius crassostreae (isolates:10; rSTs:10 tree)
- Aliiroseovarius halocynthiae (isolates:2; rSTs:1)
- Aliiroseovarius lamellibrachiae (isolates:1; rSTs:1)
- Aliiroseovarius marinus (isolates:2; rSTs:2)
- Aliiroseovarius pelagivivens (isolates:1; rSTs:1)
- Aliiroseovarius sediminilitoris (isolates:1; rSTs:1)
- Aliiroseovarius sediminis (isolates:1; rSTs:1)
- Aliiroseovarius sp. (isolates:24; rSTs:12 tree)
- Aliiroseovarius subalbicans (isolates:1; rSTs:1)
- Aliiroseovarius zhejiangensis (isolates:1; rSTs:1)
- Aliishimia (isolates:1; rSTs:1)
- Aliishimia ponticola (isolates:1; rSTs:1)
- Alkalilacustris (isolates:1; rSTs:1)
- Alkalilacustris brevis (isolates:1; rSTs:1)
- Allgaiera (isolates:2; rSTs:1)
- Allgaiera indica (isolates:2; rSTs:1)
- Allosediminivita (isolates:2; rSTs:1)
- Allosediminivita pacifica (isolates:2; rSTs:1)
- Alterinioella (isolates:1; rSTs:1)
- Alterinioella nitratireducens (isolates:1; rSTs:1)
- Amaricoccus (isolates:2; rSTs:2)
- Amylibacter (isolates:4; rSTs:4 tree)
- Anianabacter (isolates:1; rSTs:1)
- Anianabacter salinae (isolates:1; rSTs:1)
- Antarcticimicrobium (isolates:2; rSTs:2)
- Aquicoccus (isolates:2; rSTs:2)
- Aquicoccus porphyridii (isolates:2; rSTs:2)
- Aquimixticola (isolates:1; rSTs:1)
- Aquimixticola soesokkakensis (isolates:1; rSTs:1)
- Arenibacterium (isolates:2; rSTs:2)
- Ascidiaceihabitans (isolates:1; rSTs:1)
- Ascidiaceihabitans donghaensis (isolates:1; rSTs:1)
- Boseongicola (isolates:1; rSTs:1)
- Boseongicola aestuarii (isolates:1; rSTs:1)
- Brevirhabdus (isolates:3; rSTs:1)
- Brevirhabdus pacifica (isolates:3; rSTs:1)
- Cereibacter (isolates:47; rSTs:22 tree)
- Chachezhania (isolates:2; rSTs:2)
- Cochlodiniinecator (isolates:1; rSTs:1)
- Cochlodiniinecator piscidefendens (isolates:1; rSTs:1)
- Cognatishimia (isolates:5; rSTs:5 tree)
- Cognatiyoonia (isolates:2; rSTs:2)
- Coraliihabitans (isolates:1; rSTs:1)
- Coraliihabitans acroporae (isolates:1; rSTs:1)
- Cribrihabitans (isolates:2; rSTs:1)
- Cribrihabitans marinus (isolates:2; rSTs:1)
- Cypionkella (isolates:2; rSTs:2)
- Defluviimonas (isolates:10; rSTs:10 tree)
- Falsigemmobacter (isolates:2; rSTs:2)
- Falsirhodobacter (isolates:5; rSTs:5 tree)
- Fertoeibacter (isolates:1; rSTs:1)
- Fertoeibacter niger (isolates:1; rSTs:1)
- Flavimaricola (isolates:1; rSTs:1)
- Flavimaricola marinus (isolates:1; rSTs:1)
- Fluviibacterium (isolates:1; rSTs:1)
- Fluviibacterium aquatile (isolates:1; rSTs:1)
- Frigidibacter (isolates:12; rSTs:7 tree)
- Fuscibacter (isolates:1; rSTs:1)
- Fuscibacter oryzae (isolates:1; rSTs:1)
- Fuscovulum (isolates:2; rSTs:2)
- Fuscovulum blasticum (isolates:2; rSTs:2)
- Gemmobacter (isolates:22; rSTs:18 tree)
- Gemmobacter aestuarii (isolates:1; rSTs:1)
- Gemmobacter aquarius (isolates:1; rSTs:1)
- Gemmobacter aquaticus (isolates:2; rSTs:1)
- Gemmobacter aquatilis (isolates:1; rSTs:1)
- Gemmobacter caeni (isolates:2; rSTs:1)
- Gemmobacter caeruleus (isolates:1; rSTs:1)
- Gemmobacter fulvus (isolates:3; rSTs:2)
- Gemmobacter lanyuensis (isolates:1; rSTs:1)
- Gemmobacter lutimaris (isolates:1; rSTs:1)
- Gemmobacter megaterium (isolates:2; rSTs:1)
- Gemmobacter nanjingensis (isolates:1; rSTs:1)
- Gemmobacter nectariphilus (isolates:1; rSTs:1)
- Gemmobacter serpentinus (isolates:1; rSTs:1)
- Gemmobacter sp. (isolates:2; rSTs:2)
- Gemmobacter straminiformis (isolates:1; rSTs:1)
- Gemmobacter tilapiae (isolates:1; rSTs:1)
- Gymnodinialimonas (isolates:2; rSTs:2)
- Haematobacter (isolates:8; rSTs:6 tree)
- Halocynthiibacter (isolates:5; rSTs:4 tree)
- Halovulum (isolates:2; rSTs:2)
- Histidinibacterium (isolates:2; rSTs:2)
- Jhaorihella (isolates:1; rSTs:1)
- Jhaorihella thermophila (isolates:1; rSTs:1)
- Kandeliimicrobium (isolates:1; rSTs:1)
- Kandeliimicrobium roseum (isolates:1; rSTs:1)
- Kangsaoukella (isolates:1; rSTs:1)
- Kangsaoukella pontilimi (isolates:1; rSTs:1)
- Limibaculum (isolates:1; rSTs:1)
- Limibaculum sediminis (isolates:1; rSTs:1)
- Limimaricola (isolates:9; rSTs:9 tree)
- Limimaricola cinnabarinus (isolates:1; rSTs:1)
- Limimaricola hongkongensis (isolates:1; rSTs:1)
- Limimaricola litoreus (isolates:1; rSTs:1)
- Limimaricola pyoseonensis (isolates:1; rSTs:1)
- Limimaricola soesokkakensis (isolates:2; rSTs:1)
- Limimaricola sp. (isolates:1; rSTs:2 tree)
- Limimaricola variabilis (isolates:2; rSTs:2)
- Litorivita (isolates:1; rSTs:1)
- Litorivita pollutaquae (isolates:1; rSTs:1)
- Maliponia (isolates:1; rSTs:1)
- Maliponia aquimaris (isolates:1; rSTs:1)
- Mangrovicoccus (isolates:3; rSTs:2)
- Marimonas (isolates:2; rSTs:2)
- Marinibacterium (isolates:2; rSTs:2)
- Marinosulfonomonas (isolates:1)
- Marinosulfonomonas sp. (isolates:1)
- Marivivens (isolates:5; rSTs:5 tree)
- Meinhardsimonia (isolates:2; rSTs:1)
- Meinhardsimonia xiamenensis (isolates:2; rSTs:1)
- Meridianimarinicoccus (isolates:1; rSTs:1)
- Meridianimarinicoccus roseus (isolates:1; rSTs:1)
- Monaibacterium (isolates:1; rSTs:1)
- Monaibacterium marinum (isolates:1; rSTs:1)
- Natronohydrobacter (isolates:1; rSTs:1)
- Natronohydrobacter thiooxidans (isolates:1; rSTs:1)
- Neotabrizicola (isolates:1; rSTs:1)
- Neotabrizicola shimadae (isolates:1; rSTs:1)
- Neptunicoccus (isolates:1; rSTs:1)
- Neptunicoccus sediminis (isolates:1; rSTs:1)
- Nioella (isolates:4; rSTs:4 tree)
- Oceanibium (isolates:1; rSTs:1)
- Oceanibium sediminis (isolates:1; rSTs:1)
- Oceanicella (isolates:3; rSTs:2)
- Oceanicella actignis (isolates:3; rSTs:2)
- Oceaniglobus (isolates:3; rSTs:3 tree)
- Oceanomicrobium (isolates:1; rSTs:1)
- Oceanomicrobium pacificus (isolates:1; rSTs:1)
- Pacificitalea (isolates:2; rSTs:1)
- Pacificitalea manganoxidans (isolates:2; rSTs:1)
- Paenihalocynthiibacter (isolates:1; rSTs:1)
- Paenihalocynthiibacter styelae (isolates:1; rSTs:1)
- Paenirhodobacter (isolates:1; rSTs:1)
- Paenirhodobacter enshiensis (isolates:1; rSTs:1)
- Paracoccus (isolates:186; rSTs:149 tree)
- Paracoccus acridae (isolates:1; rSTs:1)
- Paracoccus aeridis (isolates:1; rSTs:1)
- Paracoccus aerius (isolates:2; rSTs:1)
- Paracoccus aerodenitrificans (isolates:1; rSTs:1)
- Paracoccus aestuarii (isolates:2; rSTs:1)
- Paracoccus aestuariivivens (isolates:1; rSTs:1)
- Paracoccus albicereus (isolates:1; rSTs:1)
- Paracoccus albus (isolates:1; rSTs:1)
- Paracoccus alcaliphilus (isolates:2; rSTs:1)
- Paracoccus alkanivorans (isolates:1; rSTs:1)
- Paracoccus alkenifer (isolates:1; rSTs:1)
- Paracoccus aminophilus (isolates:1; rSTs:1)
- Paracoccus aminovorans (isolates:4; rSTs:3 tree)
- Paracoccus amoyensis (isolates:1; rSTs:1)
- Paracoccus aurantiacus (isolates:1; rSTs:1)
- Paracoccus beibuensis (isolates:1; rSTs:1)
- Paracoccus binzhouensis (isolates:1; rSTs:1)
- Paracoccus bogoriensis (isolates:1; rSTs:1)
- Paracoccus caeni (isolates:1; rSTs:1)
- Paracoccus chinensis (isolates:1; rSTs:1)
- Paracoccus contaminans (isolates:1; rSTs:1)
- Paracoccus denitrificans (isolates:11; rSTs:4 tree)
- Paracoccus everestensis (isolates:1; rSTs:1)
- Paracoccus fistulariae (isolates:2; rSTs:1)
- Paracoccus fontiphilus (isolates:1; rSTs:1)
- Paracoccus gahaiensis (isolates:1; rSTs:1)
- Paracoccus haematequi (isolates:1; rSTs:1)
- Paracoccus haeundaensis (isolates:1; rSTs:1)
- Paracoccus halophilus (isolates:2; rSTs:1)
- Paracoccus hibiscisoli (isolates:1; rSTs:1)
- Paracoccus homiensis (isolates:1; rSTs:1)
- Paracoccus indicus (isolates:1; rSTs:1)
- Paracoccus isoporae (isolates:1; rSTs:1)
- Paracoccus jeotgali (isolates:1; rSTs:1)
- Paracoccus kondratievae (isolates:2; rSTs:2)
- Paracoccus laeviglucosivorans (isolates:2; rSTs:1)
- Paracoccus liaowanqingii (isolates:2; rSTs:2)
- Paracoccus lichenicola (isolates:1; rSTs:1)
- Paracoccus limosus (isolates:1; rSTs:1)
- Paracoccus litorisediminis (isolates:1; rSTs:1)
- Paracoccus luteus (isolates:1; rSTs:1)
- Paracoccus lutimaris (isolates:1; rSTs:1)
- Paracoccus marcusii (isolates:2; rSTs:2)
- Paracoccus marinaquae (isolates:1; rSTs:1)
- Paracoccus marinus (isolates:1; rSTs:1)
- Paracoccus methylarcula (isolates:1; rSTs:1)
- Paracoccus methylovorus (isolates:1; rSTs:1)
- Paracoccus mutanolyticus (isolates:1; rSTs:1)
- Paracoccus nototheniae (isolates:1; rSTs:1)
- Paracoccus onchidii (isolates:1; rSTs:1)
- Paracoccus onubensis (isolates:2; rSTs:2)
- Paracoccus pantotrophus (isolates:10; rSTs:7 tree)
- Paracoccus ravus (isolates:1; rSTs:1)
- Paracoccus rhizosphaerae (isolates:1; rSTs:1)
- Paracoccus salipaludis (isolates:1; rSTs:1)
- Paracoccus saliphilus (isolates:1; rSTs:1)
- Paracoccus salsus (isolates:1; rSTs:1)
- Paracoccus sanguinis (isolates:6; rSTs:4 tree)
- Paracoccus sediminicola (isolates:1; rSTs:1)
- Paracoccus sediminilitoris (isolates:1; rSTs:1)
- Paracoccus sediminis (isolates:2; rSTs:1)
- Paracoccus seriniphilus (isolates:2; rSTs:1)
- Paracoccus shandongensis (isolates:1; rSTs:1)
- Paracoccus shanxieyensis (isolates:2; rSTs:1)
- Paracoccus siganidrum (isolates:2; rSTs:1)
- Paracoccus solventivorans (isolates:1; rSTs:1)
- Paracoccus sp. (isolates:50; rSTs:42 tree)
- Paracoccus sphaerophysae (isolates:1; rSTs:1)
- Paracoccus stylophorae (isolates:1; rSTs:1)
- Paracoccus subflavus (isolates:1; rSTs:1)
- Paracoccus sulfuroxidans (isolates:2; rSTs:1)
- Paracoccus suum (isolates:1; rSTs:1)
- Paracoccus tegillarcae (isolates:1; rSTs:1)
- Paracoccus thiocyanatus (isolates:3; rSTs:2)
- Paracoccus tibetensis (isolates:1; rSTs:1)
- Paracoccus versutus (isolates:7; rSTs:5 tree)
- Paracoccus xiamenensis (isolates:1; rSTs:1)
- Paracoccus yeei (isolates:8; rSTs:6 tree)
- Paracoccus zeaxanthinifaciens (isolates:1; rSTs:1)
- Paracoccus zhejiangensis (isolates:1; rSTs:1)
- Pararhodobacter (isolates:7; rSTs:6 tree)
- Parasedimentitalea (isolates:3; rSTs:2)
- Paroceanicella (isolates:1; rSTs:1)
- Paroceanicella profunda (isolates:1; rSTs:1)
- Pelagivirga (isolates:1; rSTs:1)
- Pelagivirga sediminicola (isolates:1; rSTs:1)
- Pelagovum (isolates:2; rSTs:1)
- Pelagovum pacificum (isolates:2; rSTs:1)
- Phaeovulum (isolates:6; rSTs:3 tree)
- Phycocomes (isolates:1; rSTs:1)
- Phycocomes zhengii (isolates:1; rSTs:1)
- Pikeienuella (isolates:1; rSTs:1)
- Pikeienuella piscinae (isolates:1; rSTs:1)
- Planktomarina (isolates:1; rSTs:1)
- Planktomarina temperata (isolates:1; rSTs:1)
- Planktotalea (isolates:3; rSTs:2 tree)
- Polymorphum (isolates:1; rSTs:1)
- Polymorphum gilvum (isolates:1; rSTs:1)
- Pontibrevibacter (isolates:2; rSTs:2)
- Pontibrevibacter nitratireducens (isolates:2; rSTs:2)
- Pontivivens (isolates:3; rSTs:2)
- Profundibacter (isolates:1; rSTs:1)
- Profundibacter amoris (isolates:1; rSTs:1)
- Pseudaestuariivita (isolates:2; rSTs:2)
- Pseudodonghicola (isolates:3; rSTs:2)
- Pseudogemmobacter (isolates:4; rSTs:4 tree)
- Pseudohalocynthiibacter (isolates:2; rSTs:2)
- Pseudooceanicola (isolates:21; rSTs:17 tree)
- Pseudooceanicola aestuarii (isolates:1; rSTs:1)
- Pseudooceanicola algae (isolates:1; rSTs:1)
- Pseudooceanicola antarcticus (isolates:2; rSTs:1)
- Pseudooceanicola atlanticus (isolates:1; rSTs:1)
- Pseudooceanicola batsensis (isolates:1; rSTs:1)
- Pseudooceanicola endophyticus (isolates:1; rSTs:1)
- Pseudooceanicola lipolyticus (isolates:1; rSTs:1)
- Pseudooceanicola marinus (isolates:3; rSTs:2)
- Pseudooceanicola nanhaiensis (isolates:2; rSTs:1)
- Pseudooceanicola nitratireducens (isolates:4; rSTs:3 tree)
- Pseudooceanicola onchidii (isolates:1; rSTs:1)
- Pseudooceanicola sediminis (isolates:1; rSTs:1)
- Pseudooceanicola sp. (isolates:1; rSTs:1)
- Pseudooceanicola spongiae (isolates:1; rSTs:1)
- Pseudooctadecabacter (isolates:1; rSTs:1)
- Pseudooctadecabacter jejudonensis (isolates:1; rSTs:1)
- Pseudophaeobacter (isolates:5; rSTs:5 tree)
- Pseudoprimorskyibacter (isolates:1; rSTs:1)
- Pseudoprimorskyibacter insulae (isolates:1; rSTs:1)
- Pseudorhodobacter (isolates:8; rSTs:6 tree)
- Pseudoroseicyclus (isolates:3; rSTs:2)
- Pseudotabrizicola (isolates:4; rSTs:4 tree)
- Pseudothioclava (isolates:1; rSTs:1)
- Pseudothioclava arenosa (isolates:1; rSTs:1)
- Psychromarinibacter (isolates:2; rSTs:2)
- Pukyongiella (isolates:1; rSTs:1)
- Pukyongiella litopenaei (isolates:1; rSTs:1)
- Puniceibacterium (isolates:3; rSTs:3 tree)
- Qingshengfaniella (isolates:1; rSTs:1)
- Qingshengfaniella alkalisoli (isolates:1; rSTs:1)
- Rhabdonatronobacter (isolates:1; rSTs:1)
- Rhabdonatronobacter sediminivivens (isolates:1; rSTs:1)
- Rhodobaca (isolates:2; rSTs:1)
- Rhodobaca barguzinensis (isolates:2; rSTs:1)
- Rhodobacter (isolates:37; rSTs:26 tree)
- Candidatus Rhodobacter lobularis (isolates:1; rSTs:1)
- Rhodobacter aestuarii (isolates:2; rSTs:1)
- Rhodobacter amnigenus (isolates:2; rSTs:1)
- Rhodobacter calidifons (isolates:1; rSTs:1)
- Rhodobacter capsulatus (isolates:16; rSTs:9 tree)
- Rhodobacter kunshanensis (isolates:1; rSTs:1)
- Rhodobacter maris (isolates:1; rSTs:1)
- Rhodobacter ruber (isolates:1; rSTs:1)
- Rhodobacter sp. (isolates:10; rSTs:8 tree)
- Rhodobacter viridis (isolates:1; rSTs:1)
- Rhodobacter xinxiangensis (isolates:1; rSTs:1)
- Rhodobaculum (isolates:1; rSTs:1)
- Rhodobaculum claviforme (isolates:1; rSTs:1)
- Rhodophyticola (isolates:2; rSTs:3 tree)
- Rhodosalinus (isolates:2; rSTs:2)
- Rhodovulum (isolates:41; rSTs:28 tree)
- Rhodovulum adriaticum (isolates:2; rSTs:1)
- Rhodovulum bhavnagarense (isolates:1; rSTs:1)
- Rhodovulum euryhalinum (isolates:1; rSTs:1)
- Rhodovulum imhoffii (isolates:2; rSTs:1)
- Rhodovulum kholense (isolates:1; rSTs:1)
- Rhodovulum marinum (isolates:1; rSTs:1)
- Rhodovulum robiginosum (isolates:1; rSTs:1)
- Rhodovulum sp. (isolates:4; rSTs:4 tree)
- Rhodovulum steppense (isolates:1; rSTs:1)
- Rhodovulum strictum (isolates:1; rSTs:1)
- Rhodovulum sulfidophilum (isolates:21; rSTs:11 tree)
- Rhodovulum tesquicola (isolates:1; rSTs:1)
- Rhodovulum viride (isolates:1; rSTs:1)
- Rhodovulum visakhapatnamense (isolates:3; rSTs:2)
- Roseibaca (isolates:5; rSTs:4 tree)
- Roseicitreum (isolates:2; rSTs:1)
- Roseicitreum antarcticum (isolates:2; rSTs:1)
- Roseinatronobacter (isolates:5; rSTs:4 tree)
- Roseitranquillus (isolates:1; rSTs:1)
- Roseitranquillus sediminis (isolates:1; rSTs:1)
- Rubricella (isolates:1; rSTs:1)
- Rubricella aquisinus (isolates:1; rSTs:1)
- Rubrimonas (isolates:1; rSTs:1)
- Rubrimonas cliftonensis (isolates:1; rSTs:1)
- Sedimentimonas (isolates:3; rSTs:3 tree)
- Sedimentitalea (isolates:2; rSTs:1)
- Sedimentitalea nanhaiensis (isolates:2; rSTs:1)
- Silicimonas (isolates:2; rSTs:1)
- Silicimonas algicola (isolates:2; rSTs:1)
- Sinirhodobacter (isolates:8; rSTs:8 tree)
- Solirhodobacter (isolates:1; rSTs:1)
- Solirhodobacter olei (isolates:1; rSTs:1)
- Stagnihabitans (isolates:1; rSTs:1)
- Stagnihabitans tardus (isolates:1; rSTs:1)
- Szabonella (isolates:1; rSTs:1)
- Szabonella alba (isolates:1; rSTs:1)
- Tabrizicola (isolates:9; rSTs:9 tree)
- Tabrizicola aquatica (isolates:1; rSTs:1)
- Tabrizicola flagellatus (isolates:1; rSTs:1)
- Tabrizicola oligotrophica (isolates:1; rSTs:1)
- Tabrizicola piscis (isolates:1; rSTs:1)
- Tabrizicola rongguiensis (isolates:1; rSTs:1)
- Tabrizicola soli (isolates:1; rSTs:1)
- Tabrizicola sp. (isolates:2; rSTs:2)
- Tabrizicola thermarum (isolates:1; rSTs:1)
- Thalassobium (isolates:1; rSTs:1)
- Thalassobium sp. (isolates:1; rSTs:1)
- Thalassorhabdomicrobium (isolates:2; rSTs:2)
- Thalassorhabdomicrobium marinisediminis (isolates:2; rSTs:2)
- Thermohalobaculum (isolates:1; rSTs:1)
- Thermohalobaculum xanthum (isolates:1; rSTs:1)
- Thioclava (isolates:25; rSTs:26 tree)
- Thioclava atlantica (isolates:1; rSTs:1)
- Thioclava dalianensis (isolates:2; rSTs:2)
- Thioclava electrotropha (isolates:1; rSTs:1)
- Thioclava indica (isolates:1; rSTs:1)
- Thioclava marina (isolates:1; rSTs:1)
- Thioclava nitratireducens (isolates:2; rSTs:2)
- Thioclava pacifica (isolates:1; rSTs:1)
- Thioclava sediminum (isolates:1; rSTs:1)
- Thioclava sp. (isolates:15; rSTs:16 tree)
- Tritonibacter (isolates:64; rSTs:18 tree)
- Tritonibacter aquimaris (isolates:1; rSTs:1)
- Tritonibacter horizontis (isolates:1; rSTs:1)
- Tritonibacter litoralis (isolates:1; rSTs:1)
- Tritonibacter mobilis (isolates:55; rSTs:12 tree)
- Tritonibacter multivorans (isolates:3; rSTs:1)
- Tritonibacter scottomollicae (isolates:2; rSTs:2)
- Tritonibacter sp. (isolates:1)
- Vannielia (isolates:5; rSTs:4 tree)
- Xinfangfangia (isolates:1; rSTs:1 tree)
- Xinfangfangia pollutisoli (isolates:1; rSTs:1)
- Yoonia (isolates:19; rSTs:17 tree)
- Yoonia litorea (isolates:1; rSTs:1)
- Yoonia maricola (isolates:1; rSTs:1)
- Yoonia maritima (isolates:2; rSTs:2)
- Yoonia ponticola (isolates:1; rSTs:1)
- Yoonia rosea (isolates:1; rSTs:1)
- Yoonia sediminilitoris (isolates:2; rSTs:2)
- Yoonia sp. (isolates:7; rSTs:6 tree)
- Yoonia tamlensis (isolates:1; rSTs:1)
- Yoonia vestfoldensis (isolates:3; rSTs:2)
- Zongyanglinia (isolates:2; rSTs:2)
- Abyssibius (isolates:1; rSTs:1)
- Roseobacteraceae (isolates:1131; rSTs:813 tree)
- Actibacterium (isolates:9; rSTs:8 tree)
- Actibacterium atlanticum (isolates:1; rSTs:1)
- Actibacterium lipolyticum (isolates:1; rSTs:1)
- Actibacterium mucosum (isolates:1; rSTs:1)
- Actibacterium naphthalenivorans (isolates:1; rSTs:1)
- Actibacterium pelagium (isolates:2; rSTs:2)
- Actibacterium sp. (isolates:2; rSTs:1)
- Actibacterium ureilyticum (isolates:1; rSTs:1)
- Aliiruegeria (isolates:3; rSTs:3 tree)
- Alloyangia (isolates:4; rSTs:4 tree)
- Antarctobacter (isolates:2; rSTs:2)
- Antarctobacter heliothermus (isolates:2; rSTs:2)
- Celeribacter (isolates:22; rSTs:17 tree)
- Celeribacter baekdonensis (isolates:3; rSTs:3 tree)
- Celeribacter ethanolicus (isolates:2; rSTs:2)
- Celeribacter halophilus (isolates:8; rSTs:4 tree)
- Celeribacter indicus (isolates:1; rSTs:1)
- Celeribacter litoreus (isolates:1; rSTs:1)
- Celeribacter marinus (isolates:2; rSTs:1)
- Celeribacter naphthalenivorans (isolates:1; rSTs:1)
- Celeribacter neptunius (isolates:1; rSTs:1)
- Celeribacter persicus (isolates:1; rSTs:1)
- Celeribacter sp. (isolates:2; rSTs:2)
- Citreicella (isolates:1; rSTs:1)
- Citreicella sp. (isolates:1; rSTs:1)
- Citreimonas (isolates:1; rSTs:1)
- Citreimonas salinaria (isolates:1; rSTs:1)
- Dinoroseobacter (isolates:4; rSTs:3 tree)
- Donghicola (isolates:5; rSTs:5 tree)
- Epibacterium (isolates:5; rSTs:4 tree)
- Falsihalocynthiibacter (isolates:1; rSTs:1)
- Falsihalocynthiibacter arcticus (isolates:1; rSTs:1)
- Falsiruegeria (isolates:3; rSTs:3 tree)
- Hasllibacter (isolates:1; rSTs:1)
- Hasllibacter halocynthiae (isolates:1; rSTs:1)
- Heliomarina (isolates:1; rSTs:1)
- Heliomarina baculiformis (isolates:1; rSTs:1)
- Jannaschia (isolates:20; rSTs:18 tree)
- Jannaschia aquimarina (isolates:2; rSTs:1)
- Jannaschia donghaensis (isolates:1; rSTs:1)
- Jannaschia faecimaris (isolates:1; rSTs:1)
- Jannaschia formosa (isolates:1; rSTs:1)
- Jannaschia helgolandensis (isolates:1; rSTs:1)
- Jannaschia marina (isolates:1; rSTs:1)
- Jannaschia pohangensis (isolates:1; rSTs:1)
- Jannaschia rubra (isolates:3; rSTs:2)
- Jannaschia seohaensis (isolates:1; rSTs:1)
- Jannaschia seosinensis (isolates:1; rSTs:1)
- Jannaschia sp. (isolates:7; rSTs:7 tree)
- Ketogulonicigenium (isolates:7; rSTs:4 tree)
- Leisingera (isolates:39; rSTs:38 tree)
- Leisingera aquaemixtae (isolates:7; rSTs:7 tree)
- Leisingera aquimarina (isolates:1; rSTs:1)
- Leisingera caerulea (isolates:6; rSTs:6 tree)
- Leisingera daeponensis (isolates:1; rSTs:1)
- Leisingera methylohalidivorans (isolates:1; rSTs:1)
- Leisingera sp. (isolates:22; rSTs:21 tree)
- Leisingera thetidis (isolates:1; rSTs:1)
- Lentibacter (isolates:6; rSTs:6 tree)
- Litoreibacter (isolates:9; rSTs:9 tree)
- Litoreibacter albidus (isolates:1; rSTs:1)
- Litoreibacter arenae (isolates:1; rSTs:1)
- Litoreibacter ascidiaceicola (isolates:1; rSTs:1)
- Litoreibacter halocynthiae (isolates:2; rSTs:2)
- Litoreibacter janthinus (isolates:1; rSTs:1)
- Litoreibacter meonggei (isolates:1; rSTs:1)
- Litoreibacter ponti (isolates:1; rSTs:1)
- Litoreibacter roseus (isolates:1; rSTs:1)
- Loktanella (isolates:11; rSTs:11 tree)
- Lutimaribacter (isolates:5; rSTs:3 tree)
- Mameliella (isolates:22; rSTs:14 tree)
- Marinovum (isolates:7; rSTs:5 tree)
- Maritimibacter (isolates:10; rSTs:7 tree)
- Marivita (isolates:36; rSTs:7 tree)
- Mesobacterium (isolates:1; rSTs:1)
- Mesobacterium pallidum (isolates:1; rSTs:1)
- Mesobaculum (isolates:1; rSTs:1)
- Mesobaculum littorinae (isolates:1; rSTs:1)
- Nereida (isolates:4; rSTs:3)
- Oceanicola (isolates:1; rSTs:1)
- Oceanicola granulosus (isolates:1; rSTs:1)
- Oceaniovalibus (isolates:1; rSTs:1)
- Oceaniovalibus guishaninsula (isolates:1; rSTs:1)
- Octadecabacter (isolates:9; rSTs:7 tree)
- Octadecabacter algicola (isolates:1; rSTs:1)
- Octadecabacter antarcticus (isolates:1; rSTs:1)
- Octadecabacter arcticus (isolates:1; rSTs:1)
- Octadecabacter ascidiaceicola (isolates:1; rSTs:1)
- Octadecabacter dasysiphoniae (isolates:1; rSTs:1)
- Octadecabacter sp. (isolates:2; rSTs:1)
- Octadecabacter temperatus (isolates:2; rSTs:1)
- Pacificibacter (isolates:5; rSTs:4 tree)
- Pacificoceanicola (isolates:1; rSTs:1)
- Pacificoceanicola onchidii (isolates:1; rSTs:1)
- Palleronia (isolates:12; rSTs:11 tree)
- Palleronia abyssalis (isolates:1; rSTs:1)
- Palleronia aestuarii (isolates:1; rSTs:1)
- Palleronia caenipelagi (isolates:1; rSTs:1)
- Palleronia marisminoris (isolates:2; rSTs:1)
- Palleronia pelagia (isolates:1; rSTs:1)
- Palleronia pontilimi (isolates:1; rSTs:1)
- Palleronia rufa (isolates:1; rSTs:1)
- Palleronia salina (isolates:1; rSTs:1)
- Palleronia sediminis (isolates:1; rSTs:1)
- Palleronia sp. (isolates:2; rSTs:2)
- Pelagimonas (isolates:4; rSTs:2)
- Phaeobacter (isolates:78; rSTs:62 tree)
- Phaeobacter gallaeciensis (isolates:7; rSTs:3 tree)
- Phaeobacter inhibens (isolates:46; rSTs:38 tree)
- Phaeobacter italicus (isolates:9; rSTs:8 tree)
- Phaeobacter marinintestinus (isolates:1; rSTs:1)
- Phaeobacter piscinae (isolates:8; rSTs:6 tree)
- Phaeobacter porticola (isolates:1; rSTs:1)
- Phaeobacter sp. (isolates:6; rSTs:5 tree)
- Phycobacter (isolates:1)
- Phycobacter azelaicus (isolates:1)
- Pontibaca (isolates:2; rSTs:2)
- Ponticoccus (isolates:1; rSTs:1)
- Ponticoccus alexandrii (isolates:1; rSTs:1)
- Poseidonocella (isolates:2; rSTs:2)
- Primorskyibacter (isolates:4; rSTs:4 tree)
- Profundibacterium (isolates:1; rSTs:1)
- Profundibacterium mesophilum (isolates:1; rSTs:1)
- Pseudoponticoccus (isolates:1; rSTs:1)
- Pseudoponticoccus marisrubri (isolates:1; rSTs:1)
- Pseudoruegeria (isolates:2; rSTs:2 tree)
- Pseudosulfitobacter (isolates:121; rSTs:5 tree)
- Rhodoalgimonas (isolates:1; rSTs:1)
- Rhodoalgimonas zhirmunskyi (isolates:1; rSTs:1)
- Roseibacterium (isolates:4; rSTs:4 tree)
- Roseicyclus (isolates:3; rSTs:2)
- Roseisalinus (isolates:1; rSTs:1)
- Roseisalinus antarcticus (isolates:1; rSTs:1)
- Roseivivax (isolates:14; rSTs:13 tree)
- Roseivivax halodurans (isolates:1; rSTs:1)
- Roseivivax halotolerans (isolates:1; rSTs:1)
- Roseivivax isoporae (isolates:1; rSTs:1)
- Roseivivax jejudonensis (isolates:1; rSTs:1)
- Roseivivax lentus (isolates:1; rSTs:1)
- Roseivivax marinus (isolates:4; rSTs:4 tree)
- Roseivivax sediminis (isolates:1; rSTs:1)
- Roseivivax sp. (isolates:4; rSTs:3 tree)
- Roseobacter (isolates:13; rSTs:11 tree)
- Roseovarius (isolates:76; rSTs:62 tree)
- Roseovarius aestuarii (isolates:2; rSTs:1)
- Roseovarius aestuariivivens (isolates:1; rSTs:1)
- Roseovarius albus (isolates:1; rSTs:1)
- Roseovarius amoyensis (isolates:1; rSTs:1)
- Roseovarius arcticus (isolates:1; rSTs:1)
- Roseovarius atlanticus (isolates:4; rSTs:2)
- Roseovarius autotrophicus (isolates:1; rSTs:1)
- Roseovarius azorensis (isolates:1; rSTs:1)
- Roseovarius bejariae (isolates:1; rSTs:1)
- Roseovarius carneus (isolates:1; rSTs:1)
- Roseovarius confluentis (isolates:1; rSTs:1)
- Roseovarius dicentrarchi (isolates:1; rSTs:1)
- Roseovarius faecimaris (isolates:1; rSTs:1)
- Roseovarius gaetbuli (isolates:1; rSTs:1)
- Roseovarius gahaiensis (isolates:1; rSTs:1)
- Roseovarius halotolerans (isolates:2; rSTs:1)
- Roseovarius indicus (isolates:4; rSTs:2)
- Roseovarius litoreus (isolates:1; rSTs:1)
- Roseovarius litorisediminis (isolates:1; rSTs:1)
- Roseovarius lutimaris (isolates:1; rSTs:1)
- Roseovarius marisflavi (isolates:1; rSTs:1)
- Roseovarius mucosus (isolates:3; rSTs:3 tree)
- Roseovarius nanhaiticus (isolates:3; rSTs:2)
- Roseovarius nitratireducens (isolates:1; rSTs:1)
- Roseovarius nubinhibens (isolates:2; rSTs:2)
- Roseovarius pacificus (isolates:2; rSTs:1)
- Roseovarius pelagicus (isolates:1; rSTs:1)
- Roseovarius salinarum (isolates:1; rSTs:1)
- Roseovarius sp. (isolates:30; rSTs:25 tree)
- Roseovarius spongiae (isolates:1; rSTs:1)
- Roseovarius tolerans (isolates:3; rSTs:2)
- Rubellimicrobium (isolates:8; rSTs:7 tree)
- Rubellimicrobium aerolatum (isolates:1; rSTs:1)
- Rubellimicrobium arenae (isolates:2; rSTs:1)
- Rubellimicrobium mesophilum (isolates:1; rSTs:1)
- Rubellimicrobium roseum (isolates:1; rSTs:1)
- Rubellimicrobium rubrum (isolates:1; rSTs:1)
- Rubellimicrobium sp. (isolates:1; rSTs:1)
- Rubellimicrobium thermophilum (isolates:1; rSTs:1)
- Ruegeria (isolates:152; rSTs:239 tree)
- Ruegeria alba (isolates:1; rSTs:1)
- Ruegeria arenilitoris (isolates:32; rSTs:30 tree)
- Ruegeria atlantica (isolates:5; rSTs:5 tree)
- Ruegeria conchae (isolates:9; rSTs:8 tree)
- Ruegeria denitrificans (isolates:1; rSTs:1)
- Ruegeria faecimaris (isolates:6; rSTs:6 tree)
- Ruegeria haliotis (isolates:1; rSTs:1)
- Ruegeria halocynthiae (isolates:1; rSTs:1)
- Ruegeria intermedia (isolates:1; rSTs:1)
- Ruegeria lacuscaerulensis (isolates:1; rSTs:1)
- Ruegeria marina (isolates:1; rSTs:1)
- Ruegeria marisrubri (isolates:1; rSTs:1)
- Ruegeria meonggei (isolates:1; rSTs:1)
- Ruegeria pomeroyi (isolates:12; rSTs:11 tree)
- Ruegeria profundi (isolates:3; rSTs:2)
- Ruegeria sediminis (isolates:1; rSTs:1)
- Ruegeria sp. (isolates:74; rSTs:166 tree)
- Ruegeria spongiae (isolates:1; rSTs:1)
- Sagittula (isolates:5; rSTs:5 tree)
- Salibaculum (isolates:2; rSTs:2)
- Salinihabitans (isolates:1; rSTs:1)
- Salinihabitans flavidus (isolates:1; rSTs:1)
- Salipiger (isolates:27; rSTs:22 tree)
- Salipiger abyssi (isolates:2; rSTs:2)
- Salipiger aestuarii (isolates:4; rSTs:3 tree)
- Salipiger bermudensis (isolates:5; rSTs:5 tree)
- Salipiger manganoxidans (isolates:2; rSTs:2)
- Salipiger mangrovisoli (isolates:1; rSTs:1)
- Salipiger marinus (isolates:1; rSTs:1)
- Salipiger mucosus (isolates:1; rSTs:1)
- Salipiger pallidus (isolates:1; rSTs:1)
- Salipiger pentaromativorans (isolates:1; rSTs:1)
- Salipiger profundus (isolates:3; rSTs:1)
- Salipiger sp. (isolates:2)
- Salipiger thiooxidans (isolates:4; rSTs:4 tree)
- Sediminimonas (isolates:1; rSTs:1)
- Sediminimonas qiaohouensis (isolates:1; rSTs:1)
- Seohaeicola (isolates:1; rSTs:1)
- Seohaeicola zhoushanensis (isolates:1; rSTs:1)
- Shimia (isolates:31; rSTs:30 tree)
- Shimia abyssi (isolates:1; rSTs:1)
- Shimia aestuarii (isolates:1; rSTs:1)
- Shimia biformata (isolates:1; rSTs:1)
- Shimia gijangensis (isolates:1; rSTs:1)
- Shimia haliotis (isolates:1; rSTs:1)
- Shimia isoporae (isolates:1; rSTs:1)
- Shimia litoralis (isolates:1; rSTs:1)
- Shimia marina (isolates:2; rSTs:2)
- Shimia sagamensis (isolates:1; rSTs:1)
- Shimia sediminis (isolates:1; rSTs:1)
- Shimia sp. (isolates:9; rSTs:9 tree)
- Shimia thalassica (isolates:11; rSTs:10 tree)
- Sinisalibacter (isolates:2; rSTs:2)
- Sulfitobacter (isolates:260; rSTs:86 tree)
- Sulfitobacter aestuariivivens (isolates:1; rSTs:1)
- Sulfitobacter albidus (isolates:1; rSTs:1)
- Sulfitobacter alexandrii (isolates:1; rSTs:1)
- Sulfitobacter algicola (isolates:1; rSTs:1)
- Sulfitobacter brevis (isolates:1; rSTs:1)
- Sulfitobacter delicatus (isolates:1; rSTs:1)
- Sulfitobacter donghicola (isolates:2; rSTs:1)
- Sulfitobacter dubius (isolates:3; rSTs:3 tree)
- Sulfitobacter faviae (isolates:4; rSTs:4 tree)
- Sulfitobacter geojensis (isolates:36; rSTs:4 tree)
- Sulfitobacter guttiformis (isolates:2; rSTs:1)
- Sulfitobacter indolifex (isolates:2; rSTs:1)
- Sulfitobacter litoralis (isolates:1; rSTs:1)
- Sulfitobacter marinus (isolates:1; rSTs:1)
- Sulfitobacter maritimus (isolates:1; rSTs:1)
- Sulfitobacter mediterraneus (isolates:91; rSTs:8 tree)
- Sulfitobacter noctilucae (isolates:1; rSTs:1)
- Sulfitobacter noctilucicola (isolates:2; rSTs:1)
- Sulfitobacter pacificus (isolates:1; rSTs:1)
- Sulfitobacter pontiacus (isolates:10; rSTs:10 tree)
- Sulfitobacter sabulilitoris (isolates:1; rSTs:1)
- Sulfitobacter sediminilitoris (isolates:1; rSTs:1)
- Sulfitobacter sp. (isolates:94; rSTs:39 tree)
- Sulfitobacter undariae (isolates:1; rSTs:1)
- Tateyamaria (isolates:6; rSTs:6 tree)
- Thalassobacter (isolates:6; rSTs:4 tree)
- Thalassococcus (isolates:2; rSTs:2)
- Thalassovita (isolates:13; rSTs:9 tree)
- Thalassobius sp. Cn5-15 (isolates:1; rSTs:1)
- Thalassobius vesicularis (isolates:1; rSTs:1)
- Thalassovita aquimarina (isolates:1; rSTs:1)
- Thalassovita autumnalis (isolates:2; rSTs:1)
- Thalassovita gelatinovora (isolates:3; rSTs:1)
- Thalassovita litoralis (isolates:1; rSTs:1)
- Thalassovita mangrovi (isolates:1; rSTs:1)
- Thalassovita mediterranea (isolates:2; rSTs:1)
- Thalassovita taeanensis (isolates:1; rSTs:1)
- Thetidibacter (isolates:1; rSTs:1)
- Thetidibacter halocola (isolates:1; rSTs:1)
- Thiosulfatihalobacter (isolates:2; rSTs:2)
- Thiosulfatihalobacter marinus (isolates:2; rSTs:2)
- Tranquillimonas (isolates:2; rSTs:2 tree)
- Tropicibacter (isolates:4; rSTs:3 tree)
- Tropicimonas (isolates:3; rSTs:3 tree)
- Wenxinia (isolates:4; rSTs:3 tree)
- Actibacterium (isolates:9; rSTs:8 tree)
- Rhodospirillales (isolates:1070; rSTs:768 tree)
- Acetobacteraceae (isolates:763; rSTs:523 tree)
- Acetobacter (isolates:205; rSTs:117 tree)
- Acetobacter aceti (isolates:7; rSTs:2)
- Acetobacter ascendens (isolates:3; rSTs:3 tree)
- Acetobacter cerevisiae (isolates:8; rSTs:6 tree)
- Acetobacter cibinongensis (isolates:4; rSTs:2)
- Acetobacter conturbans (isolates:1; rSTs:1)
- Acetobacter estunensis (isolates:3; rSTs:2)
- Acetobacter fabarum (isolates:6; rSTs:3 tree)
- Acetobacter fallax (isolates:2; rSTs:1)
- Acetobacter farinalis (isolates:2; rSTs:1)
- Acetobacter garciniae (isolates:2; rSTs:1)
- Acetobacter ghanensis (isolates:3; rSTs:1)
- Acetobacter indonesiensis (isolates:7; rSTs:5 tree)
- Acetobacter lambici (isolates:3; rSTs:1)
- Acetobacter lovaniensis (isolates:4; rSTs:2)
- Acetobacter malorum (isolates:7; rSTs:5 tree)
- Acetobacter musti (isolates:1; rSTs:1)
- Acetobacter nitrogenifigens (isolates:3; rSTs:1)
- Acetobacter oeni (isolates:4; rSTs:1)
- Acetobacter okinawensis (isolates:5; rSTs:5 tree)
- Acetobacter orientalis (isolates:10; rSTs:6 tree)
- Acetobacter orleanensis (isolates:5; rSTs:1)
- Acetobacter oryzifermentans (isolates:1; rSTs:1)
- Acetobacter oryzoeni (isolates:2; rSTs:1)
- Acetobacter papayae (isolates:1; rSTs:1)
- Acetobacter pasteurianus (isolates:29; rSTs:14 tree)
- Acetobacter peroxydans (isolates:4; rSTs:1)
- Acetobacter persici (isolates:9; rSTs:9 tree)
- Acetobacter pomorum (isolates:7; rSTs:2)
- Acetobacter sacchari (isolates:1; rSTs:1)
- Acetobacter senegalensis (isolates:12; rSTs:11 tree)
- Acetobacter sicerae (isolates:2; rSTs:2)
- Acetobacter sp. (isolates:21; rSTs:8 tree)
- Acetobacter suratthaniensis (isolates:2; rSTs:1)
- Acetobacter syzygii (isolates:6; rSTs:3 tree)
- Acetobacter thailandicus (isolates:6; rSTs:5 tree)
- Acetobacter tropicalis (isolates:11; rSTs:5 tree)
- Acetobacter vaccinii (isolates:1; rSTs:1)
- Acidibrevibacterium (isolates:1; rSTs:1)
- Acidibrevibacterium fodinaquatile (isolates:1; rSTs:1)
- Acidicaldus (isolates:1)
- Acidicaldus organivorans (isolates:1)
- Acidiphilium (isolates:14; rSTs:11 tree)
- Acidiphilium acidophilum (isolates:2; rSTs:2)
- Acidiphilium angustum (isolates:1; rSTs:1)
- Acidiphilium cryptum (isolates:1; rSTs:1)
- Acidiphilium iwatense (isolates:1; rSTs:1)
- Acidiphilium multivorum (isolates:2; rSTs:1)
- Acidiphilium rubrum (isolates:1; rSTs:1)
- Acidiphilium sp. (isolates:6; rSTs:4 tree)
- Acidisoma (isolates:3; rSTs:5 tree)
- Acidisphaera (isolates:1; rSTs:1)
- Acidisphaera rubrifaciens (isolates:1; rSTs:1)
- Acidocella (isolates:10; rSTs:6 tree)
- Acidomonas (isolates:5; rSTs:3 tree)
- Ameyamaea (isolates:3; rSTs:1)
- Ameyamaea chiangmaiensis (isolates:3; rSTs:1)
- Aristophania (isolates:2; rSTs:2)
- Aristophania vespae (isolates:2; rSTs:2)
- Asaia (isolates:32; rSTs:21 tree)
- Asaia astilbis (isolates:1; rSTs:1)
- Asaia bogorensis (isolates:12; rSTs:5 tree)
- Asaia krungthepensis (isolates:1; rSTs:1)
- Asaia lannensis (isolates:2; rSTs:1)
- Asaia platycodi (isolates:1; rSTs:1)
- Asaia prunellae (isolates:1; rSTs:1)
- Asaia siamensis (isolates:3; rSTs:1)
- Asaia sp. (isolates:7; rSTs:7 tree)
- Asaia spathodeae (isolates:4; rSTs:3)
- Belnapia (isolates:6; rSTs:6 tree)
- Bombella (isolates:12; rSTs:12 tree)
- Bombella apis (isolates:2; rSTs:2)
- Bombella dulcis (isolates:1; rSTs:1)
- Bombella favorum (isolates:1; rSTs:1)
- Bombella intestini (isolates:1; rSTs:1)
- Bombella mellum (isolates:1; rSTs:1)
- Bombella pluederhausensis (isolates:1; rSTs:1)
- Bombella pollinis (isolates:1; rSTs:1)
- Bombella saccharophila (isolates:1; rSTs:1)
- Bombella sp. (isolates:3; rSTs:3 tree)
- Brytella (isolates:2; rSTs:1)
- Brytella acorum (isolates:2; rSTs:1)
- Caldovatus (isolates:2; rSTs:2)
- Commensalibacter (isolates:43; rSTs:26 tree)
- Commensalibacter communis (isolates:10; rSTs:5 tree)
- Commensalibacter intestini (isolates:2; rSTs:2)
- Commensalibacter melissae (isolates:11; rSTs:10 tree)
- Commensalibacter papalotli (ex Botero et al. 2024) (isolates:2)
- Commensalibacter papalotli (ex Servin-Garciduenas et al. 2014) (isolates:1; rSTs:1)
- Commensalibacter sp. (isolates:17; rSTs:8 tree)
- Crenalkalicoccus (isolates:1; rSTs:1)
- Crenalkalicoccus roseus (isolates:1; rSTs:1)
- Dankookia (isolates:1; rSTs:1)
- Dankookia rubra (isolates:1; rSTs:1)
- Endobacter (isolates:3; rSTs:1)
- Endobacter medicaginis (isolates:3; rSTs:1)
- Entomobacter (isolates:1; rSTs:1)
- Entomobacter blattae (isolates:1; rSTs:1)
- Falsiroseomonas (isolates:7; rSTs:6 tree)
- Formicincola (isolates:1; rSTs:1)
- Formicincola oecophyllae (isolates:1; rSTs:1)
- Gluconacetobacter (isolates:30; rSTs:19 tree)
- Gluconacetobacter aggeris (isolates:1; rSTs:1)
- Gluconacetobacter asukensis (isolates:1; rSTs:1)
- Gluconacetobacter azotocaptans (isolates:3; rSTs:2)
- Gluconacetobacter diazotrophicus (isolates:4; rSTs:4 tree)
- Gluconacetobacter dulcium (isolates:3; rSTs:2)
- Gluconacetobacter entanii (isolates:8; rSTs:3 tree)
- Gluconacetobacter johannae (isolates:2; rSTs:1)
- Gluconacetobacter liquefaciens (isolates:3; rSTs:1)
- Gluconacetobacter sacchari (isolates:2; rSTs:1)
- Gluconacetobacter takamatsuzukensis (isolates:1; rSTs:1)
- Gluconacetobacter tumulicola (isolates:1; rSTs:1)
- Gluconacetobacter tumulisoli (isolates:1; rSTs:1)
- Gluconobacter (isolates:130; rSTs:88 tree)
- Gluconobacter aidae (isolates:1; rSTs:1)
- Gluconobacter albidus (isolates:8; rSTs:5 tree)
- Gluconobacter cadivus (isolates:2; rSTs:2)
- Gluconobacter cerevisiae (isolates:2; rSTs:1)
- Gluconobacter cerinus (isolates:20; rSTs:16 tree)
- Gluconobacter frateurii (isolates:4; rSTs:2)
- Gluconobacter japonicus (isolates:11; rSTs:6 tree)
- Gluconobacter kanchanaburiensis (isolates:3; rSTs:1)
- Gluconobacter kondonii (isolates:11; rSTs:9 tree)
- Gluconobacter morbifer (isolates:1; rSTs:1)
- Gluconobacter oxydans (isolates:16; rSTs:12 tree)
- Gluconobacter potus (isolates:2; rSTs:2)
- Gluconobacter roseus (isolates:4; rSTs:2)
- Gluconobacter sp. (isolates:20; rSTs:15 tree)
- Gluconobacter sphaericus (isolates:8; rSTs:4 tree)
- Gluconobacter thailandicus (isolates:9; rSTs:4 tree)
- Gluconobacter vitians (isolates:1; rSTs:1)
- Gluconobacter wancherniae (isolates:7; rSTs:4 tree)
- Granulibacter (isolates:10; rSTs:8 tree)
- Humitalea (isolates:1; rSTs:1)
- Humitalea rosea (isolates:1; rSTs:1)
- Komagataeibacter (isolates:64; rSTs:48 tree)
- Komagataeibacter diospyri (isolates:2; rSTs:2)
- Komagataeibacter europaeus (isolates:8; rSTs:7 tree)
- Komagataeibacter intermedius (isolates:5; rSTs:3 tree)
- Komagataeibacter kakiaceti (isolates:2; rSTs:1)
- Komagataeibacter medellinensis (isolates:2; rSTs:2)
- Komagataeibacter melaceti (isolates:1; rSTs:1)
- Komagataeibacter melomenusus (isolates:2; rSTs:1)
- Komagataeibacter nataicola (isolates:5; rSTs:3 tree)
- Komagataeibacter oboediens (isolates:10; rSTs:8 tree)
- Komagataeibacter rhaeticus (isolates:8; rSTs:5 tree)
- Komagataeibacter saccharivorans (isolates:5; rSTs:4 tree)
- Komagataeibacter sp. (isolates:3; rSTs:4 tree)
- Komagataeibacter sucrofermentans (isolates:2; rSTs:1)
- Komagataeibacter swingsii (isolates:3; rSTs:2)
- Komagataeibacter xylinus (isolates:6; rSTs:4 tree)
- Kozakia (isolates:5; rSTs:3 tree)
- Lichenicoccus (isolates:1; rSTs:1)
- Lichenicoccus roseus (isolates:1; rSTs:1)
- Lichenicola (isolates:1; rSTs:1)
- Lichenicola cladoniae (isolates:1; rSTs:1)
- Limobrevibacterium (isolates:1; rSTs:1)
- Limobrevibacterium gyesilva (isolates:1; rSTs:1)
- Neoasaia (isolates:3; rSTs:1)
- Neoasaia chiangmaiensis (isolates:3; rSTs:1)
- Neokomagataea (isolates:3; rSTs:3 tree)
- Neoroseomonas (isolates:11; rSTs:9 tree)
- Neoroseomonas alba (isolates:1; rSTs:1)
- Neoroseomonas alkaliterrae (isolates:2; rSTs:2)
- Neoroseomonas eburnea (isolates:1; rSTs:1)
- Neoroseomonas lacus (isolates:1; rSTs:1)
- Neoroseomonas marina (isolates:1; rSTs:1)
- Neoroseomonas nitratireducens (isolates:1)
- Neoroseomonas oryzicola (isolates:2; rSTs:1)
- Neoroseomonas soli (isolates:1; rSTs:1)
- Neoroseomonas terrae (isolates:1; rSTs:1)
- Nguyenibacter (isolates:2; rSTs:2)
- Novacetimonas (isolates:21; rSTs:13 tree)
- Oecophyllibacter (isolates:3; rSTs:3 tree)
- Oleomonas (isolates:1; rSTs:1)
- Oleomonas cavernae (isolates:1; rSTs:1)
- Paeniroseomonas (isolates:1; rSTs:1)
- Paeniroseomonas aquatica (isolates:1; rSTs:1)
- Paracraurococcus (isolates:2; rSTs:1)
- Paracraurococcus ruber (isolates:2; rSTs:1)
- Pararoseomonas (isolates:2; rSTs:2)
- Parasaccharibacter (isolates:10; rSTs:8 tree)
- Plastoroseomonas (isolates:3; rSTs:3 tree)
- Pseudoroseomonas (isolates:14; rSTs:13 tree)
- Pseudoroseomonas aerophila (isolates:1; rSTs:1)
- Pseudoroseomonas aestuarii (isolates:1; rSTs:1)
- Pseudoroseomonas cervicalis (isolates:3; rSTs:3 tree)
- Pseudoroseomonas coralli (isolates:1; rSTs:1)
- Pseudoroseomonas deserti (isolates:1; rSTs:1)
- Pseudoroseomonas ludipueritiae (isolates:1; rSTs:1)
- Pseudoroseomonas oryzae (isolates:1; rSTs:1)
- Pseudoroseomonas rhizosphaerae (isolates:1; rSTs:1)
- Pseudoroseomonas vastitatis (isolates:2; rSTs:2)
- Pseudoroseomonas wenyumeiae (isolates:2; rSTs:1)
- Rhodopila (isolates:1; rSTs:1)
- Rhodopila globiformis (isolates:1; rSTs:1)
- Rhodovarius (isolates:2; rSTs:2)
- Rhodovastum (isolates:2; rSTs:1)
- Rhodovastum atsumiense (isolates:2; rSTs:1)
- Roseicella (isolates:4; rSTs:4 tree)
- Roseococcus (isolates:6; rSTs:5 tree)
- Roseomonas (isolates:54; rSTs:43 tree)
- Roseomonas acroporae (isolates:1; rSTs:1)
- Roseomonas aerilata (isolates:1; rSTs:1)
- Roseomonas fluvialis (isolates:1; rSTs:1)
- Roseomonas gilardii (isolates:6; rSTs:5 tree)
- Roseomonas haemaphysalidis (isolates:2; rSTs:1)
- Roseomonas harenae (isolates:1; rSTs:1)
- Roseomonas marmotae (isolates:2; rSTs:2)
- Roseomonas mucosa (isolates:19; rSTs:13 tree)
- Roseomonas nepalensis (isolates:1; rSTs:1)
- Roseomonas oleicola (isolates:1; rSTs:1)
- Roseomonas pecuniae (isolates:1; rSTs:1)
- Roseomonas ponticola (isolates:1; rSTs:1)
- Roseomonas rosea (isolates:1; rSTs:1)
- Roseomonas rosulenta (isolates:1)
- Roseomonas rubea (isolates:1; rSTs:1)
- Roseomonas sp. (isolates:14; rSTs:12 tree)
- Rubritepida (isolates:1; rSTs:1)
- Rubritepida flocculans (isolates:1; rSTs:1)
- Sabulicella (isolates:1; rSTs:1)
- Sabulicella rubraurantiaca (isolates:1; rSTs:1)
- Saccharibacter (isolates:6; rSTs:3 tree)
- Sediminicoccus (isolates:1)
- Sediminicoccus sp. (isolates:1)
- Siccirubricoccus (isolates:5; rSTs:3 tree)
- Swaminathania (isolates:2; rSTs:1)
- Swaminathania salitolerans (isolates:2; rSTs:1)
- Swingsia (isolates:1; rSTs:1)
- Swingsia samuiensis (isolates:1; rSTs:1)
- Tanticharoenia (isolates:2; rSTs:1)
- Tanticharoenia sakaeratensis (isolates:2; rSTs:1)
- Acetobacter (isolates:205; rSTs:117 tree)
- Azospirillaceae (isolates:124; rSTs:92 tree)
- Arenibaculum (isolates:1; rSTs:1)
- Arenibaculum pallidiluteum (isolates:1; rSTs:1)
- Azospirillum (isolates:93; rSTs:66 tree)
- Azospirillum aestuarii (isolates:1; rSTs:1)
- Azospirillum agricola (isolates:2; rSTs:2)
- Azospirillum argentinense (isolates:6; rSTs:6 tree)
- Azospirillum baldaniorum (isolates:4; rSTs:2)
- Azospirillum brasilense (isolates:23; rSTs:8 tree)
- Azospirillum canadense (isolates:1; rSTs:1)
- Azospirillum cavernae (isolates:1; rSTs:1)
- Azospirillum doebereinerae (isolates:2; rSTs:2)
- Azospirillum endophyticum (isolates:1; rSTs:1)
- Azospirillum fermentarium (isolates:1; rSTs:1)
- Azospirillum formosense (isolates:2; rSTs:2)
- Azospirillum griseum (isolates:1; rSTs:1)
- Azospirillum halopraeferens (isolates:2; rSTs:1)
- Azospirillum humicireducens (isolates:1; rSTs:1)
- Azospirillum isscasi (isolates:1)
- Azospirillum lipoferum (isolates:2; rSTs:1)
- Azospirillum melinis (isolates:2; rSTs:1)
- Azospirillum oleiclasticum (isolates:2; rSTs:1)
- Azospirillum oryzae (isolates:4; rSTs:2)
- Azospirillum palustre (isolates:1; rSTs:1)
- Azospirillum picis (isolates:2; rSTs:1)
- Azospirillum ramasamyi (isolates:1; rSTs:1)
- Azospirillum rugosum (isolates:2; rSTs:1)
- Azospirillum soli (isolates:1; rSTs:1)
- Azospirillum sp. (isolates:23; rSTs:23 tree)
- Azospirillum tabaci (isolates:1; rSTs:1)
- Azospirillum thermophilum (isolates:1; rSTs:1)
- Azospirillum thiophilum (isolates:2; rSTs:1)
- Indioceanicola (isolates:1; rSTs:1)
- Indioceanicola profundi (isolates:1; rSTs:1)
- Nitrospirillum (isolates:15; rSTs:12 tree)
- Niveispirillum (isolates:6; rSTs:5 tree)
- Oleisolibacter (isolates:1; rSTs:1)
- Oleisolibacter albus (isolates:1; rSTs:1)
- Skermanella (isolates:7; rSTs:6 tree)
- Arenibaculum (isolates:1; rSTs:1)
- Dongiaceae (isolates:8; rSTs:6 tree)
- Elioraeaceae (isolates:5; rSTs:5 tree)
- Fodinicurvataceae (isolates:7; rSTs:6 tree)
- Kiloniellaceae (isolates:10; rSTs:10 tree)
- Magnetospirillaceae (isolates:5; rSTs:5 tree)
- Magnetovibrionaceae (isolates:4; rSTs:2)
- Novispirillaceae (isolates:20; rSTs:12 tree)
- Oceanibaculaceae (isolates:4; rSTs:4 tree)
- Rhodospirillaceae (isolates:52; rSTs:42 tree)
- Aerophototrophica (isolates:1; rSTs:1)
- Aerophototrophica crusticola (isolates:1; rSTs:1)
- Algihabitans (isolates:1; rSTs:1)
- Algihabitans albus (isolates:1; rSTs:1)
- Candidatus Endolissoclinum (isolates:2; rSTs:2)
- Candidatus Endolissoclinum faulkneri (isolates:2; rSTs:2)
- Defluviicoccus (isolates:1)
- Defluviicoccus vanus (isolates:1)
- Denitrobaculum (isolates:1; rSTs:1)
- Denitrobaculum tricleocarpae (isolates:1; rSTs:1)
- Elstera (isolates:3; rSTs:1)
- Ferrovibrio (isolates:1; rSTs:1)
- Ferrovibrio terrae (isolates:1; rSTs:1)
- Ferruginivarius (isolates:1; rSTs:1)
- Ferruginivarius sediminum (isolates:1; rSTs:1)
- Hwanghaeella (isolates:1; rSTs:1)
- Hwanghaeella grinnelliae (isolates:1; rSTs:1)
- Inquilinus (isolates:5; rSTs:5 tree)
- Magnetospirillum (isolates:15; rSTs:14 tree)
- Magnetospirillum aberrantis (isolates:1; rSTs:1)
- Magnetospirillum fulvum (isolates:2; rSTs:2)
- Magnetospirillum gryphiswaldense (isolates:3; rSTs:3 tree)
- Magnetospirillum molischianum (isolates:1; rSTs:1)
- Magnetospirillum moscoviense (isolates:1; rSTs:1)
- Magnetospirillum sp. (isolates:6; rSTs:5 tree)
- Magnetospirillum sulfuroxidans (isolates:1; rSTs:1)
- Marivibrio (isolates:1; rSTs:1)
- Marivibrio halodurans (isolates:1; rSTs:1)
- Pacificispira (isolates:1; rSTs:1)
- Pacificispira spongiicola (isolates:1; rSTs:1)
- Pararhodospirillum (isolates:2; rSTs:2)
- Phaeovibrio (isolates:1)
- Phaeovibrio sulfidiphilus (isolates:1)
- Rhodospira (isolates:1; rSTs:1)
- Rhodospira trueperi (isolates:1; rSTs:1)
- Rhodospirillum (isolates:6; rSTs:4 tree)
- Roseospira (isolates:6; rSTs:3 tree)
- Roseospirillum (isolates:1; rSTs:1)
- Roseospirillum parvum (isolates:1; rSTs:1)
- Telmatospirillum (isolates:1; rSTs:1)
- Telmatospirillum siberiense (isolates:1; rSTs:1)
- Aerophototrophica (isolates:1; rSTs:1)
- Shumkoniaceae (isolates:1)
- Stellaceae (isolates:4; rSTs:3 tree)
- Terasakiellaceae (isolates:5; rSTs:4 tree)
- Thalassobaculaceae (isolates:9; rSTs:8 tree)
- Thalassospiraceae (isolates:45; rSTs:43 tree)
- Magnetospira (isolates:1; rSTs:1)
- Magnetospira sp. (isolates:1; rSTs:1)
- Thalassospira (isolates:44; rSTs:42 tree)
- Thalassospira alkalitolerans (isolates:1; rSTs:1)
- Thalassospira australica (isolates:1; rSTs:1)
- Thalassospira indica (isolates:1; rSTs:1)
- Thalassospira lohafexi (isolates:1; rSTs:1)
- Thalassospira lucentensis (isolates:2; rSTs:1)
- Thalassospira marina (isolates:2; rSTs:2)
- Thalassospira mesophila (isolates:1; rSTs:1)
- Thalassospira permensis (isolates:2; rSTs:2)
- Thalassospira povalilytica (isolates:3; rSTs:3 tree)
- Thalassospira profundimaris (isolates:1; rSTs:1)
- Thalassospira sp. (isolates:23; rSTs:23 tree)
- Thalassospira tepidiphila (isolates:3; rSTs:2)
- Thalassospira xiamenensis (isolates:2; rSTs:2)
- Thalassospira xianhensis (isolates:1; rSTs:1)
- Magnetospira (isolates:1; rSTs:1)
- Zavarziniaceae (isolates:4; rSTs:3 tree)
- Acetobacteraceae (isolates:763; rSTs:523 tree)
- Rhodothalassiales (isolates:5; rSTs:3 tree)
- Rickettsiales (isolates:383; rSTs:232 tree)
- Anaplasmataceae (isolates:196; rSTs:135 tree)
- Anaplasma (isolates:39; rSTs:23 tree)
- Candidatus Neoehrlichia (isolates:6; rSTs:4 tree)
- Candidatus Xenolissoclinum (isolates:1)
- Candidatus Xenolissoclinum pacificiensis (isolates:1)
- Ehrlichia (isolates:45; rSTs:32 tree)
- Neorickettsia (isolates:5; rSTs:5 tree)
- Wolbachia (isolates:100; rSTs:71 tree)
- Candidatus Wolbachia massiliensis (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Aedes albopictus (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Anopheles demeilloni (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Armadillidium vulgare (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Atemnus politus (isolates:2)
- Wolbachia endosymbiont of Bemisia tabaci (isolates:1)
- Wolbachia endosymbiont of Brugia malayi (isolates:2; rSTs:1)
- Wolbachia endosymbiont of Brugia pahangi (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Cardiocondyla obscurior (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Carposina sasakii (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Ceratitis capitata (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Ceratosolen solmsi (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Chrysomya megacephala (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Cimex lectularius (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Corcyra cephalonica (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Cruorifilaria tuberocauda (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Ctenocephalides felis (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Culex molestus (isolates:1)
- Wolbachia endosymbiont of Culex quinquefasciatus (isolates:2; rSTs:1)
- Wolbachia endosymbiont of Cylisticus convexus (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Dactylopius coccus (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Delia radicum (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Diaphorina citri (isolates:8; rSTs:1)
- Wolbachia endosymbiont of Dipetalonema caudispina (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Dirofilaria (Dirofilaria) immitis (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Drosophila ananassae (isolates:1)
- Wolbachia endosymbiont of Drosophila auraria (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Drosophila incompta (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Drosophila innubila (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Drosophila mauritiana (isolates:3; rSTs:1)
- Wolbachia endosymbiont of Drosophila melanogaster (isolates:13; rSTs:1)
- Wolbachia endosymbiont of Drosophila santomea (isolates:2)
- Wolbachia endosymbiont of Drosophila sechellia (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Drosophila simulans (isolates:4; rSTs:1)
- Wolbachia endosymbiont of Drosophila subpulchrella (isolates:1)
- Wolbachia endosymbiont of Drosophila willistoni (isolates:1)
- Wolbachia endosymbiont of Erebia cassioides (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Folsomia candida (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Glossina morsitans morsitans (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Laodelphax striatellus (isolates:2; rSTs:2)
- Wolbachia endosymbiont of Leptopilina clavipes (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Listronotus oregonensis (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Litomosoides brasiliensis (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Litomosoides sigmodontis (isolates:2; rSTs:1)
- Wolbachia endosymbiont of Madathamugadia hiepei (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Mansonella ozzardi (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Mansonella perstans (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Muscidifurax uniraptor (isolates:1)
- Wolbachia endosymbiont of Nasonia oneida (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Nasonia vitripennis (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Nilaparvata lugens (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Nomada ferruginata (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Nomada flava (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Nomada leucophthalma (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Nomada panzeri (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Onchocerca ochengi (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Onchocerca volvulus (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Operophtera brumata (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Pentalonia nigronervosa (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Rhagoletis cerasi (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Spodoptera picta (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Tribolium confusum (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Trichogramma pretiosum (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Wiebesia pumilae (isolates:1; rSTs:1)
- Wolbachia endosymbiont of Wuchereria bancrofti (isolates:1)
- Wolbachia pipientis (isolates:1; rSTs:1)
- Wolbachia sp. (isolates:4; rSTs:13 tree)
- Candidatus Deianiraeaceae (isolates:1)
- Candidatus Midichloriaceae (isolates:8; rSTs:3 tree)
- Candidatus Anadelfobacter (isolates:1)
- Candidatus Anadelfobacter sociabilis (isolates:1)
- Candidatus Aquarickettsia (isolates:1; rSTs:1)
- Candidatus Aquarickettsia rohweri (isolates:1; rSTs:1)
- Candidatus Bandiella (isolates:2)
- Candidatus Bandiella numerosa (isolates:2)
- Candidatus Fokinia (isolates:2; rSTs:1)
- Candidatus Jidaibacter (isolates:1; rSTs:1)
- Candidatus Jidaibacter acanthamoeba (isolates:1; rSTs:1)
- Candidatus Midichloria (isolates:1)
- Candidatus Midichloria mitochondrii (isolates:1)
- Candidatus Anadelfobacter (isolates:1)
- Rickettsiaceae (isolates:174; rSTs:92 tree)
- Candidatus Megaera (isolates:2; rSTs:1)
- Candidatus Megaera polyxenophila (isolates:2; rSTs:1)
- Candidatus Phycorickettsia (isolates:1; rSTs:1)
- Candidatus Phycorickettsia trachydisci (isolates:1; rSTs:1)
- Candidatus Sarmatiella (isolates:1)
- Candidatus Sarmatiella mevalonica (isolates:1)
- Candidatus Sneabacter (isolates:1)
- Candidatus Sneabacter namystus (isolates:1)
- Orientia (isolates:21; rSTs:14 tree)
- Rickettsia (isolates:148; rSTs:76 tree)
- Candidatus Rickettsia colombianensi (isolates:1)
- Rickettsia aeschlimannii (isolates:1; rSTs:1)
- Rickettsia africae (isolates:1; rSTs:1)
- Rickettsia akari (isolates:1; rSTs:1)
- Rickettsia amblyommatis (isolates:5; rSTs:3 tree)
- Rickettsia argasii (isolates:1; rSTs:1)
- Rickettsia asembonensis (isolates:1; rSTs:1)
- Rickettsia asiatica (isolates:1; rSTs:1)
- Rickettsia australis (isolates:2; rSTs:1)
- Rickettsia bellii (isolates:4; rSTs:3 tree)
- Rickettsia canadensis (isolates:2; rSTs:2)
- Rickettsia conorii (isolates:14; rSTs:9 tree)
- Rickettsia endosymbiont of Cardiosporidium cionae (isolates:1)
- Rickettsia endosymbiont of Culicoides newsteadi (isolates:1; rSTs:1)
- Rickettsia endosymbiont of Ixodes pacificus (isolates:1; rSTs:1)
- Rickettsia endosymbiont of Ixodes scapularis (isolates:1; rSTs:1)
- Rickettsia endosymbiont of Oedothorax gibbosus (isolates:1; rSTs:1)
- Rickettsia endosymbiont of Proechinophthirus fluctus (isolates:1; rSTs:1)
- Rickettsia felis (isolates:3; rSTs:2)
- Rickettsia fournieri (isolates:1; rSTs:1)
- Rickettsia gravesii (isolates:1; rSTs:1)
- Rickettsia helvetica (isolates:1; rSTs:1)
- Rickettsia honei (isolates:1; rSTs:1)
- Rickettsia hoogstraalii (isolates:3; rSTs:3 tree)
- Rickettsia japonica (isolates:35; rSTs:2)
- Rickettsia massiliae (isolates:2; rSTs:2)
- Rickettsia monacensis (isolates:1; rSTs:1)
- Rickettsia montanensis (isolates:1; rSTs:1)
- Rickettsia parkeri (isolates:6; rSTs:4 tree)
- Rickettsia peacockii (isolates:1; rSTs:1)
- Rickettsia philipii (isolates:1; rSTs:1)
- Rickettsia prowazekii (isolates:13; rSTs:6 tree)
- Rickettsia rhipicephali (isolates:3; rSTs:3 tree)
- Rickettsia rickettsii (isolates:17; rSTs:5 tree)
- Rickettsia sibirica (isolates:3; rSTs:3 tree)
- Rickettsia slovaca (isolates:2; rSTs:2)
- Rickettsia sp. (isolates:4; rSTs:2)
- Rickettsia sp. MEAM1 (Bemisia tabaci) (isolates:2; rSTs:1)
- Rickettsia tamurae (isolates:2; rSTs:2)
- Rickettsia tillamookensis (isolates:1; rSTs:1)
- Rickettsia typhi (isolates:4; rSTs:1)
- Candidatus Megaera (isolates:2; rSTs:1)
- Anaplasmataceae (isolates:196; rSTs:135 tree)
- Sneathiellales (isolates:13; rSTs:11 tree)
- Sneathiellaceae (isolates:13; rSTs:11 tree)
- Oceanibacterium (isolates:1; rSTs:1)
- Oceanibacterium hippocampi (isolates:1; rSTs:1)
- Sneathiella (isolates:12; rSTs:10 tree)
- Sneathiella aquimaris (isolates:2; rSTs:1)
- Sneathiella chinensis (isolates:2; rSTs:1)
- Sneathiella chungangensis (isolates:2; rSTs:1)
- Sneathiella glossodoripedis (isolates:1; rSTs:1)
- Sneathiella limimaris (isolates:1; rSTs:1)
- Sneathiella litorea (isolates:1; rSTs:1)
- Sneathiella marina (isolates:1; rSTs:1)
- Sneathiella sedimenti (isolates:1; rSTs:1)
- Sneathiella sp. (isolates:1; rSTs:2)
- Oceanibacterium (isolates:1; rSTs:1)
- Sneathiellaceae (isolates:13; rSTs:11 tree)
- Sphingomonadales (isolates:1364; rSTs:1021 tree)
- Erythrobacteraceae (isolates:200; rSTs:178 tree)
- Actirhodobacter (isolates:1; rSTs:1)
- Actirhodobacter atriluteus (isolates:1; rSTs:1)
- Allopontixanthobacter (isolates:2; rSTs:2)
- Alteraurantiacibacter (isolates:3; rSTs:3 tree)
- Altererythrobacter (isolates:9; rSTs:8 tree)
- Altererythrobacter epoxidivorans (isolates:1; rSTs:1)
- Altererythrobacter ishigakiensis (isolates:2; rSTs:1)
- Altererythrobacter lutimaris (isolates:1; rSTs:1)
- Altererythrobacter rubellus (isolates:1; rSTs:1)
- Altererythrobacter segetis (isolates:1; rSTs:1)
- Altererythrobacter sp. (isolates:2; rSTs:2)
- Altererythrobacter xiamenensis (isolates:1; rSTs:1)
- Altericroceibacterium (isolates:4; rSTs:4 tree)
- Alteripontixanthobacter (isolates:2; rSTs:2)
- Alteriqipengyuania (isolates:3; rSTs:2 tree)
- Aurantiacibacter (isolates:20; rSTs:16 tree)
- Aurantiacibacter aquimixticola (isolates:1; rSTs:1)
- Aurantiacibacter arachoides (isolates:2; rSTs:1)
- Aurantiacibacter atlanticus (isolates:1; rSTs:1)
- Aurantiacibacter gangjinensis (isolates:2; rSTs:1)
- Aurantiacibacter luteus (isolates:1; rSTs:1)
- Aurantiacibacter marinus (isolates:2; rSTs:1)
- Aurantiacibacter odishensis (isolates:1; rSTs:1)
- Aurantiacibacter rhizosphaerae (isolates:1; rSTs:1)
- Aurantiacibacter sediminis (isolates:1; rSTs:1)
- Aurantiacibacter sp. (isolates:4; rSTs:3 tree)
- Aurantiacibacter spongiae (isolates:1; rSTs:1)
- Aurantiacibacter suaedae (isolates:1; rSTs:1)
- Aurantiacibacter xanthus (isolates:1; rSTs:1)
- Aurantiacibacter zhengii (isolates:1; rSTs:1)
- Caenibius (isolates:3; rSTs:2)
- Croceibacterium (isolates:9; rSTs:8 tree)
- Croceibacterium atlanticum (isolates:2; rSTs:1)
- Croceibacterium ferulae (isolates:1; rSTs:1)
- Croceibacterium mercuriale (isolates:1; rSTs:1)
- Croceibacterium salegens (isolates:1; rSTs:1)
- Croceibacterium selenioxidans (isolates:1; rSTs:1)
- Croceibacterium soli (isolates:1; rSTs:1)
- Croceibacterium sp. (isolates:1; rSTs:1)
- Croceibacterium xixiisoli (isolates:1; rSTs:1)
- Croceicoccus (isolates:19; rSTs:16 tree)
- Croceicoccus bisphenolivorans (isolates:1; rSTs:1)
- Croceicoccus estronivorus (isolates:1; rSTs:1)
- Croceicoccus gelatinilyticus (isolates:1; rSTs:1)
- Croceicoccus hydrothermalis (isolates:1; rSTs:1)
- Croceicoccus marinus (isolates:2; rSTs:2)
- Croceicoccus mobilis (isolates:2; rSTs:1)
- Croceicoccus naphthovorans (isolates:2; rSTs:1)
- Croceicoccus pelagius (isolates:2; rSTs:1)
- Croceicoccus ponticola (isolates:1; rSTs:1)
- Croceicoccus sediminis (isolates:1; rSTs:1)
- Croceicoccus sp. (isolates:5; rSTs:5 tree)
- Erythrobacter (isolates:32; rSTs:27 tree)
- Erythrobacter ani (isolates:1; rSTs:1)
- Erythrobacter aurantius (isolates:1; rSTs:1)
- Erythrobacter aureus (isolates:1; rSTs:1)
- Erythrobacter colymbi (isolates:1; rSTs:1)
- Erythrobacter cryptus (isolates:1; rSTs:1)
- Erythrobacter dokdonensis (isolates:2; rSTs:1)
- Erythrobacter donghaensis (isolates:1; rSTs:1)
- Erythrobacter fulvus (isolates:1; rSTs:1)
- Erythrobacter insulae (isolates:1; rSTs:1)
- Erythrobacter litoralis (isolates:2; rSTs:1)
- Erythrobacter longus (isolates:1; rSTs:1)
- Erythrobacter mangrovi (isolates:1; rSTs:1)
- Erythrobacter neustonensis (isolates:1; rSTs:1)
- Erythrobacter ramosus (isolates:2; rSTs:1)
- Erythrobacter rubeus (isolates:1; rSTs:1)
- Erythrobacter sanguineus (isolates:2; rSTs:1)
- Erythrobacter sp. (isolates:11; rSTs:10 tree)
- Erythrobacter tepidarius (isolates:1; rSTs:1)
- Parapontixanthobacter (isolates:1; rSTs:1)
- Parapontixanthobacter aurantiacus (isolates:1; rSTs:1)
- Paraurantiacibacter (isolates:1; rSTs:1)
- Paraurantiacibacter namhicola (isolates:1; rSTs:1)
- Parerythrobacter (isolates:3; rSTs:3 tree)
- Pelagerythrobacter (isolates:6; rSTs:5 tree)
- Pontixanthobacter (isolates:8; rSTs:7 tree)
- Porphyrobacter (isolates:1; rSTs:1)
- Porphyrobacter sp. (isolates:1; rSTs:1)
- Pseudopontixanthobacter (isolates:1; rSTs:1)
- Pseudopontixanthobacter vadosimaris (isolates:1; rSTs:1)
- Qipengyuania (isolates:60; rSTs:57 tree)
- Qipengyuania aerophila (isolates:1; rSTs:1)
- Qipengyuania aestuarii (isolates:1; rSTs:1)
- Qipengyuania algicida (isolates:1; rSTs:1)
- Qipengyuania aquimaris (isolates:1; rSTs:1)
- Qipengyuania aurantiaca (isolates:1; rSTs:1)
- Qipengyuania citrea (isolates:5; rSTs:4 tree)
- Qipengyuania flava (isolates:13; rSTs:10 tree)
- Qipengyuania gaetbuli (isolates:4; rSTs:4 tree)
- Qipengyuania gelatinilytica (isolates:1; rSTs:1)
- Qipengyuania huizhouensis (isolates:1; rSTs:1)
- Qipengyuania intermedia (isolates:1; rSTs:1)
- Qipengyuania marisflavi (isolates:1; rSTs:1)
- Qipengyuania mesophila (isolates:1; rSTs:1)
- Qipengyuania nanhaisediminis (isolates:1; rSTs:1)
- Qipengyuania oceanensis (isolates:1; rSTs:1)
- Qipengyuania pacifica (isolates:1; rSTs:1)
- Qipengyuania pelagi (isolates:1; rSTs:1)
- Qipengyuania polymorpha (isolates:1; rSTs:1)
- Qipengyuania proteolytica (isolates:1; rSTs:1)
- Qipengyuania psychrotolerans (isolates:1; rSTs:1)
- Qipengyuania qiaonensis (isolates:1; rSTs:1)
- Qipengyuania sediminis (isolates:1; rSTs:1)
- Qipengyuania seohaensis (isolates:1; rSTs:1)
- Qipengyuania soli (isolates:1; rSTs:1)
- Qipengyuania sp. (isolates:9; rSTs:10 tree)
- Qipengyuania sphaerica (isolates:1; rSTs:1)
- Qipengyuania spongiae (isolates:1; rSTs:1)
- Qipengyuania thermophila (isolates:1; rSTs:1)
- Qipengyuania vesicularis (isolates:1; rSTs:1)
- Qipengyuania vulgaris (isolates:1; rSTs:1)
- Qipengyuania xiamenensis (isolates:1; rSTs:1)
- Qipengyuania xiapuensis (isolates:2; rSTs:2)
- Tsuneonella (isolates:12; rSTs:11 tree)
- Tsuneonella aeria (isolates:1; rSTs:1)
- Tsuneonella amylolytica (isolates:1; rSTs:1)
- Tsuneonella deserti (isolates:1; rSTs:1)
- Tsuneonella dongtanensis (isolates:1; rSTs:1)
- Tsuneonella flava (isolates:2; rSTs:2)
- Tsuneonella litorea (isolates:1; rSTs:1)
- Tsuneonella mangrovi (isolates:1; rSTs:1)
- Tsuneonella rigui (isolates:1; rSTs:1)
- Tsuneonella suprasediminis (isolates:1; rSTs:1)
- Tsuneonella troitsensis (isolates:2; rSTs:1)
- Actirhodobacter (isolates:1; rSTs:1)
- Sphingomonadaceae (isolates:1097; rSTs:797 tree)
- Allosphingosinicella (isolates:2; rSTs:2)
- Aquisediminimonas (isolates:2; rSTs:2)
- Blastomonas (isolates:28; rSTs:12 tree)
- Citromicrobium (isolates:10; rSTs:5 tree)
- Hankyongella (isolates:1)
- Hankyongella ginsenosidimutans (isolates:1)
- Hephaestia (isolates:3; rSTs:3 tree)
- Novosphingobium (isolates:185; rSTs:135 tree)
- Novosphingobium acidiphilum (isolates:1; rSTs:1)
- Novosphingobium aerophilum (isolates:2; rSTs:2)
- Novosphingobium album (isolates:1; rSTs:1)
- Novosphingobium album (ex Liu et al. 2023) (isolates:1; rSTs:1)
- Novosphingobium aquimarinum (isolates:1; rSTs:1)
- Novosphingobium aromaticivorans (isolates:2; rSTs:1)
- Novosphingobium arvoryzae (isolates:1; rSTs:1)
- Novosphingobium aureum (isolates:1; rSTs:1)
- Novosphingobium barchaimii (isolates:1; rSTs:1)
- Novosphingobium beihaiensis (isolates:1; rSTs:1)
- Novosphingobium capsulatum (isolates:3; rSTs:2)
- Novosphingobium chloroacetimidivorans (isolates:1; rSTs:1)
- Novosphingobium clariflavum (isolates:1; rSTs:1)
- Novosphingobium colocasiae (isolates:1; rSTs:1)
- Novosphingobium cyanobacteriorum (isolates:1; rSTs:1)
- Novosphingobium decolorationis (isolates:1; rSTs:1)
- Novosphingobium endophyticum (isolates:1; rSTs:1)
- Novosphingobium flavum (isolates:1; rSTs:1)
- Novosphingobium fluoreni (isolates:1; rSTs:1)
- Novosphingobium fuchskuhlense (isolates:1; rSTs:1)
- Novosphingobium ginsenosidimutans (isolates:1; rSTs:1)
- Novosphingobium guangzhouense (isolates:1; rSTs:1)
- Novosphingobium hassiacum (isolates:1; rSTs:1)
- Novosphingobium huizhouense (isolates:1; rSTs:1)
- Novosphingobium humi (isolates:2; rSTs:2)
- Novosphingobium indicum (isolates:1; rSTs:1)
- Novosphingobium jiangmenense (isolates:1; rSTs:1)
- Novosphingobium kaempferiae (isolates:1; rSTs:1)
- Novosphingobium kunmingense (isolates:1; rSTs:1)
- Novosphingobium lentum (isolates:1; rSTs:1)
- Novosphingobium lindaniclasticum (isolates:1; rSTs:1)
- Novosphingobium malaysiense (isolates:1; rSTs:1)
- Novosphingobium mangrovi (isolates:1; rSTs:1)
- Novosphingobium mangrovi (ex Huang et al. 2023) (isolates:1; rSTs:1)
- Novosphingobium marinum (isolates:2; rSTs:1)
- Novosphingobium mathurense (isolates:1; rSTs:1)
- Novosphingobium meiothermophilum (isolates:1; rSTs:1)
- Novosphingobium naphthalenivorans (isolates:1; rSTs:1)
- Novosphingobium nitrogenifigens (isolates:2; rSTs:1)
- Novosphingobium olei (isolates:1; rSTs:1)
- Novosphingobium organovorum (isolates:1; rSTs:1)
- Novosphingobium ovatum (isolates:1; rSTs:1)
- Novosphingobium panipatense (isolates:1; rSTs:1)
- Novosphingobium pentaromativorans (isolates:1; rSTs:1)
- Novosphingobium percolationis (isolates:1; rSTs:1)
- Novosphingobium piscinae (isolates:1; rSTs:1)
- Novosphingobium pokkalii (isolates:1; rSTs:1)
- Novosphingobium profundi (isolates:1; rSTs:1)
- Novosphingobium resinovorum (isolates:5; rSTs:5 tree)
- Novosphingobium rosa (isolates:1; rSTs:1)
- Novosphingobium sediminicola (isolates:1; rSTs:1)
- Novosphingobium sediminis (isolates:1; rSTs:1)
- Novosphingobium silvae (isolates:1; rSTs:1)
- Novosphingobium sp. (isolates:115; rSTs:71 tree)
- Novosphingobium subterraneum (isolates:2; rSTs:1)
- Novosphingobium taihuense (isolates:2; rSTs:1)
- Novosphingobium terrae (isolates:1; rSTs:1)
- Novosphingobium umbonatum (isolates:1; rSTs:1)
- Novosphingopyxis (isolates:3; rSTs:3 tree)
- Parasphingopyxis (isolates:4; rSTs:4 tree)
- Parasphingorhabdus (isolates:5; rSTs:5 tree)
- Rhizorhabdus (isolates:9; rSTs:8 tree)
- Rhizorhapis (isolates:1; rSTs:1)
- Rhizorhapis suberifaciens (isolates:1; rSTs:1)
- Sphingobium (isolates:190; rSTs:143 tree)
- Sphingobium abikonense (isolates:1; rSTs:1)
- Sphingobium agri (isolates:1; rSTs:1)
- Sphingobium algorifonticola (isolates:1; rSTs:1)
- Sphingobium amiense (isolates:2; rSTs:1)
- Sphingobium baderi (isolates:3; rSTs:2)
- Sphingobium bisphenolivorans (isolates:1; rSTs:1)
- Sphingobium boeckii (isolates:1; rSTs:1)
- Sphingobium chlorophenolicum (isolates:3; rSTs:2)
- Sphingobium chungbukense (isolates:1; rSTs:1)
- Sphingobium cloacae (isolates:2; rSTs:1)
- Sphingobium cupriresistens (isolates:2; rSTs:2)
- Sphingobium estronivorans (isolates:1; rSTs:1)
- Sphingobium fluviale (isolates:1; rSTs:1)
- Sphingobium fontiphilum (isolates:1; rSTs:1)
- Sphingobium fuliginis (isolates:7; rSTs:5 tree)
- Sphingobium herbicidovorans (isolates:3; rSTs:1)
- Sphingobium indicum (isolates:5; rSTs:3 tree)
- Sphingobium jiangsuense (isolates:2; rSTs:1)
- Sphingobium lactosutens (isolates:1; rSTs:1)
- Sphingobium lignivorans (isolates:1; rSTs:1)
- Sphingobium limneticum (isolates:3; rSTs:2)
- Sphingobium naphthae (isolates:2; rSTs:2)
- Sphingobium nicotianae (isolates:1; rSTs:1)
- Sphingobium phenoxybenzoativorans (isolates:2; rSTs:2)
- Sphingobium psychrophilum (isolates:1; rSTs:1)
- Sphingobium quisquiliarum (isolates:1; rSTs:1)
- Sphingobium scionense (isolates:1; rSTs:1)
- Sphingobium soli (isolates:1; rSTs:1)
- Sphingobium sp. (isolates:100; rSTs:72 tree)
- Sphingobium subterraneum (isolates:1; rSTs:1)
- Sphingobium sufflavum (isolates:1; rSTs:1)
- Sphingobium terrigena (isolates:1; rSTs:1)
- Sphingobium ummariense (isolates:1; rSTs:1)
- Sphingobium vermicomposti (isolates:1; rSTs:1)
- Sphingobium wenxiniae (isolates:2; rSTs:1)
- Sphingobium xanthum (isolates:2; rSTs:2)
- Sphingobium xenophagum (isolates:5; rSTs:5 tree)
- Sphingobium yanoikuyae (isolates:24; rSTs:18 tree)
- Sphingomicrobium (isolates:12; rSTs:9 tree)
- Sphingomicrobium aestuariivivum (isolates:2; rSTs:1)
- Sphingomicrobium arenosum (isolates:1; rSTs:1)
- Sphingomicrobium astaxanthinifaciens (isolates:2; rSTs:1)
- Sphingomicrobium flavum (isolates:1; rSTs:1)
- Sphingomicrobium lutaoense (isolates:2; rSTs:1)
- Sphingomicrobium marinum (isolates:1; rSTs:1)
- Sphingomicrobium nitratireducens (isolates:1; rSTs:1)
- Sphingomicrobium sediminis (isolates:1; rSTs:1)
- Sphingomicrobium sp. (isolates:1; rSTs:1 tree)
- Sphingomonas (isolates:526; rSTs:378 tree)
- Sphingomonas abaci (isolates:1; rSTs:1)
- Sphingomonas abietis (isolates:1)
- Sphingomonas adhaesiva (isolates:2; rSTs:1)
- Sphingomonas aerolata (isolates:7; rSTs:3 tree)
- Sphingomonas aerophila (isolates:1; rSTs:1)
- Sphingomonas alba (isolates:1; rSTs:1)
- Sphingomonas albertensis (isolates:1; rSTs:1)
- Sphingomonas aliaeris (isolates:1; rSTs:1)
- Sphingomonas alpina (isolates:2; rSTs:1)
- Sphingomonas anseongensis (isolates:1; rSTs:1)
- Sphingomonas aquatilis (isolates:2; rSTs:1)
- Sphingomonas aracearum (isolates:1; rSTs:1)
- Sphingomonas arenae (isolates:2; rSTs:1)
- Sphingomonas asaccharolytica (isolates:1; rSTs:1)
- Sphingomonas astaxanthinifaciens (isolates:2; rSTs:2)
- Sphingomonas aurantiaca (isolates:5; rSTs:2)
- Sphingomonas azotifigens (isolates:1; rSTs:1)
- Sphingomonas baiyangensis (isolates:1; rSTs:1)
- Sphingomonas beigongshangi (isolates:2; rSTs:2)
- Sphingomonas brevis (isolates:1)
- Sphingomonas caeni (isolates:1)
- Sphingomonas canadensis (isolates:1; rSTs:1)
- Sphingomonas cannabina (isolates:1; rSTs:1)
- Sphingomonas carotinifaciens (isolates:4; rSTs:2)
- Sphingomonas caseinilyticus (isolates:1; rSTs:1)
- Sphingomonas cavernae (isolates:1; rSTs:1)
- Sphingomonas changbaiensis (isolates:1; rSTs:1)
- Sphingomonas changnyeongensis (isolates:1; rSTs:1)
- Sphingomonas chungangi (isolates:2; rSTs:1)
- Sphingomonas citri (isolates:1; rSTs:1)
- Sphingomonas citricola (isolates:1; rSTs:1)
- Sphingomonas colocasiae (isolates:1; rSTs:1)
- Sphingomonas corticis (isolates:1; rSTs:1)
- Sphingomonas cremea (isolates:1; rSTs:1)
- Sphingomonas crocodyli (isolates:1; rSTs:1)
- Sphingomonas crusticola (isolates:1; rSTs:1)
- Sphingomonas daechungensis (isolates:1; rSTs:1)
- Sphingomonas deserti (isolates:1; rSTs:1)
- Sphingomonas desiccabilis (isolates:3; rSTs:1)
- Sphingomonas dokdonensis (isolates:1; rSTs:1)
- Sphingomonas donggukensis (isolates:1; rSTs:1)
- Sphingomonas echinoides (isolates:3; rSTs:2)
- Sphingomonas edaphi (isolates:1; rSTs:1)
- Sphingomonas elodea (isolates:1; rSTs:1)
- Sphingomonas endolithica (isolates:1)
- Sphingomonas endophytica (isolates:1; rSTs:1)
- Sphingomonas faeni (isolates:1; rSTs:1)
- Sphingomonas fennica (isolates:1; rSTs:1)
- Sphingomonas flavalba (isolates:1; rSTs:1)
- Sphingomonas folli (isolates:1; rSTs:1)
- Sphingomonas formosensis (isolates:1; rSTs:1)
- Sphingomonas gei (isolates:1; rSTs:1)
- Sphingomonas gellani (isolates:1; rSTs:1)
- Sphingomonas gilva (isolates:1; rSTs:1)
- Sphingomonas ginkgonis (isolates:1; rSTs:1)
- Sphingomonas ginsenosidimutans (isolates:1; rSTs:1)
- Sphingomonas ginsenosidivorax (isolates:1; rSTs:1)
- Sphingomonas glacialis (isolates:2; rSTs:2)
- Sphingomonas glaciei (isolates:1; rSTs:1)
- Sphingomonas guangdongensis (isolates:1; rSTs:1)
- Sphingomonas haloaromaticamans (isolates:1; rSTs:1)
- Sphingomonas hankookensis (isolates:1; rSTs:1)
- Sphingomonas hankyongi (isolates:1; rSTs:1)
- Sphingomonas hengshuiensis (isolates:1; rSTs:1)
- Sphingomonas hominis (isolates:1; rSTs:1)
- Sphingomonas horti (isolates:1; rSTs:1)
- Sphingomonas hylomeconis (isolates:1; rSTs:1)
- Sphingomonas insulae (isolates:2; rSTs:1)
- Sphingomonas japonica (isolates:2; rSTs:1)
- Sphingomonas jaspsi (isolates:1; rSTs:1)
- Sphingomonas jatrophae (isolates:1; rSTs:1)
- Sphingomonas jeddahensis (isolates:1; rSTs:1)
- Sphingomonas jejuensis (isolates:1; rSTs:1)
- Sphingomonas jinjuensis (isolates:1; rSTs:1)
- Sphingomonas kaistensis (isolates:1; rSTs:1)
- Sphingomonas koreensis (isolates:75; rSTs:6 tree)
- Sphingomonas kyeonggiensis (isolates:2; rSTs:2)
- Sphingomonas lacunae (isolates:1; rSTs:1)
- Sphingomonas laterariae (isolates:1)
- Sphingomonas leidyi (isolates:1; rSTs:1)
- Sphingomonas lenta (isolates:1; rSTs:1)
- Sphingomonas liriopis (isolates:1; rSTs:1)
- Sphingomonas lutea (isolates:2; rSTs:2)
- Sphingomonas lycopersici (isolates:2; rSTs:2)
- Sphingomonas mali (isolates:1; rSTs:1)
- Sphingomonas melonis (isolates:9; rSTs:4 tree)
- Sphingomonas metalli (isolates:1; rSTs:1)
- Sphingomonas montana (isolates:1; rSTs:1)
- Sphingomonas montanisoli (isolates:1; rSTs:1)
- Sphingomonas morindae (isolates:1; rSTs:1)
- Sphingomonas mucosissima (isolates:1; rSTs:1)
- Sphingomonas naasensis (isolates:2; rSTs:1)
- Sphingomonas naphthae (isolates:1; rSTs:1)
- Sphingomonas nostoxanthinifaciens (isolates:1; rSTs:1)
- Sphingomonas olei (isolates:1; rSTs:1)
- Sphingomonas oleivorans (isolates:1; rSTs:1)
- Sphingomonas oligoaromativorans (isolates:1; rSTs:1)
- Sphingomonas oligophenolica (isolates:1; rSTs:1)
- Sphingomonas oryzagri (isolates:1; rSTs:1)
- Sphingomonas paeninsulae (isolates:1; rSTs:1)
- Sphingomonas palmae (isolates:1; rSTs:1)
- Sphingomonas panacis (isolates:1; rSTs:1)
- Sphingomonas panacisoli (isolates:1; rSTs:1)
- Sphingomonas panni (isolates:2; rSTs:1)
- Sphingomonas parapaucimobilis (isolates:1; rSTs:1)
- Sphingomonas parva (isolates:1; rSTs:1)
- Sphingomonas paucimobilis (isolates:11; rSTs:3 tree)
- Sphingomonas phyllosphaerae (isolates:1; rSTs:1)
- Sphingomonas piscis (isolates:1; rSTs:1)
- Sphingomonas pituitosa (isolates:1; rSTs:1)
- Sphingomonas pokkalii (isolates:1; rSTs:1)
- Sphingomonas pollutisoli (isolates:1; rSTs:1)
- Sphingomonas populi (isolates:1; rSTs:1)
- Sphingomonas prati (isolates:3; rSTs:1)
- Sphingomonas profundi (isolates:1; rSTs:1)
- Sphingomonas pruni (isolates:1; rSTs:1)
- Sphingomonas pseudosanguinis (isolates:2; rSTs:1)
- Sphingomonas psychrolutea (isolates:1; rSTs:1)
- Sphingomonas psychrotolerans (isolates:1; rSTs:1)
- Sphingomonas qomolangmaensis (isolates:1; rSTs:1)
- Sphingomonas radiodurans (isolates:1; rSTs:1)
- Sphingomonas rhizophila (isolates:1; rSTs:1)
- Sphingomonas rubra (isolates:1; rSTs:1)
- Sphingomonas sabuli (isolates:1; rSTs:1)
- Sphingomonas sanguinis (isolates:7; rSTs:4 tree)
- Sphingomonas sanxanigenens (isolates:1; rSTs:1)
- Sphingomonas sediminicola (isolates:1; rSTs:1)
- Sphingomonas segetis (isolates:1; rSTs:1)
- Sphingomonas sinipercae (isolates:1; rSTs:1)
- Sphingomonas solaris (isolates:1; rSTs:1)
- Sphingomonas soli (isolates:1; rSTs:1)
- Sphingomonas sp. (isolates:244; rSTs:211 tree)
- Sphingomonas spermidinifaciens (isolates:1; rSTs:1)
- Sphingomonas suaedae (isolates:1; rSTs:1)
- Sphingomonas tagetis (isolates:1; rSTs:1)
- Sphingomonas taxi (isolates:1; rSTs:1)
- Sphingomonas telluris (isolates:1; rSTs:1)
- Sphingomonas trueperi (isolates:1; rSTs:2)
- Sphingomonas turrisvirgatae (isolates:1; rSTs:1)
- Sphingomonas vulcanisoli (isolates:1; rSTs:1)
- Sphingomonas xanthus (isolates:1; rSTs:1)
- Sphingomonas xinjiangensis (isolates:1; rSTs:1)
- Sphingomonas yabuuchiae (isolates:3; rSTs:2)
- Sphingomonas yantingensis (isolates:1; rSTs:1)
- Sphingomonas yunnanensis (isolates:1; rSTs:1)
- Sphingomonas zeae (isolates:3; rSTs:2)
- Sphingopyxis (isolates:99; rSTs:73 tree)
- Sphingopyxis alaskensis (isolates:2; rSTs:2)
- Sphingopyxis bauzanensis (isolates:2; rSTs:1)
- Sphingopyxis flava (isolates:1; rSTs:1)
- Sphingopyxis fribergensis (isolates:1; rSTs:1)
- Sphingopyxis granuli (isolates:5; rSTs:5 tree)
- Sphingopyxis indica (isolates:2; rSTs:2)
- Sphingopyxis italica (isolates:1; rSTs:1)
- Sphingopyxis jiangsuensis (isolates:1; rSTs:1)
- Sphingopyxis lindanitolerans (isolates:1; rSTs:1)
- Sphingopyxis lutea (isolates:1; rSTs:1)
- Sphingopyxis macrogoltabida (isolates:3; rSTs:2)
- Sphingopyxis microcysteis (isolates:1; rSTs:1)
- Sphingopyxis panaciterrae (isolates:1; rSTs:1)
- Sphingopyxis panaciterrulae (isolates:1; rSTs:1)
- Sphingopyxis soli (isolates:1; rSTs:1)
- Sphingopyxis solisilvae (isolates:1; rSTs:1)
- Sphingopyxis sp. (isolates:66; rSTs:44 tree)
- Sphingopyxis terrae (isolates:6; rSTs:4 tree)
- Sphingopyxis witflariensis (isolates:1; rSTs:1)
- Sphingopyxis yananensis (isolates:1; rSTs:1)
- Sphingorhabdus (isolates:7; rSTs:6 tree)
- Sphingorhabdus contaminans (isolates:1; rSTs:1)
- Sphingorhabdus lacus (isolates:1; rSTs:1)
- Sphingorhabdus lutea (isolates:1)
- Sphingorhabdus profundilacus (isolates:1; rSTs:1)
- Sphingorhabdus rigui (isolates:1; rSTs:1)
- Sphingorhabdus soli (isolates:1; rSTs:1)
- Sphingorhabdus wooponensis (isolates:1; rSTs:1)
- Sphingosinithalassobacter (isolates:3; rSTs:3 tree)
- Stakelama (isolates:6; rSTs:5 tree)
- Tardibacter (isolates:1)
- Tardibacter chloracetimidivorans (isolates:1)
- Sphingosinicellaceae (isolates:38; rSTs:31 tree)
- Glacieibacterium (isolates:1; rSTs:1)
- Glacieibacterium frigidum (isolates:1; rSTs:1)
- Pacificimonas (isolates:4; rSTs:3 tree)
- Pedomonas (isolates:1; rSTs:1)
- Pedomonas mirosovicensis (isolates:1; rSTs:1)
- Polymorphobacter (isolates:9; rSTs:6 tree)
- Sandaracinobacter (isolates:1; rSTs:1)
- Sandaracinobacter neustonicus (isolates:1; rSTs:1)
- Sandaracinobacteroides (isolates:3; rSTs:3 tree)
- Sandarakinorhabdus (isolates:5; rSTs:5 tree)
- Sphingosinicella (isolates:12; rSTs:10 tree)
- Thermaurantiacus (isolates:2; rSTs:1)
- Thermaurantiacus tibetensis (isolates:2; rSTs:1)
- Glacieibacterium (isolates:1; rSTs:1)
- Zymomonadaceae (isolates:29; rSTs:15 tree)
- Erythrobacteraceae (isolates:200; rSTs:178 tree)
- Betaproteobacteria (isolates:90630; rSTs:29970)
- Burkholderiales (isolates:10994; rSTs:5419)
- Alcaligenaceae (isolates:2524; rSTs:654 tree)
- Achromobacter (isolates:347; rSTs:248 tree)
- Achromobacter aegrifaciens (isolates:10; rSTs:9 tree)
- Achromobacter aestuarii (isolates:1; rSTs:1)
- Achromobacter agilis (isolates:1; rSTs:1)
- Achromobacter aloeverae (isolates:1; rSTs:1)
- Achromobacter animicus (isolates:4; rSTs:4 tree)
- Achromobacter anxifer (isolates:4; rSTs:4 tree)
- Achromobacter arsenitoxydans (isolates:1; rSTs:1)
- Achromobacter deleyi (isolates:4; rSTs:2)
- Achromobacter denitrificans (isolates:17; rSTs:11 tree)
- Achromobacter dolens (isolates:8; rSTs:8 tree)
- Achromobacter insolitus (isolates:19; rSTs:14 tree)
- Achromobacter insuavis (isolates:15; rSTs:9 tree)
- Achromobacter kerstersii (isolates:2; rSTs:2)
- Achromobacter marplatensis (isolates:5; rSTs:3 tree)
- Achromobacter mucicolens (isolates:14; rSTs:14 tree)
- Achromobacter pestifer (isolates:1; rSTs:1)
- Achromobacter piechaudii (isolates:7; rSTs:5 tree)
- Achromobacter pulmonis (isolates:3; rSTs:3 tree)
- Achromobacter ruhlandii (isolates:32; rSTs:19 tree)
- Achromobacter sp. (isolates:46; rSTs:41 tree)
- Achromobacter spanius (isolates:9; rSTs:6 tree)
- Achromobacter veterisilvae (isolates:1; rSTs:1)
- Achromobacter xylosoxidans (isolates:142; rSTs:88 tree)
- Advenella (isolates:10; rSTs:10 tree)
- Advenella alkanexedens (isolates:2; rSTs:2)
- Advenella faeciporci (isolates:1; rSTs:1)
- Advenella incenata (isolates:1; rSTs:1)
- Advenella kashmirensis (isolates:1; rSTs:1)
- Advenella mandrilli (isolates:1; rSTs:1)
- Advenella mimigardefordensis (isolates:1; rSTs:1)
- Advenella sp. (isolates:3; rSTs:3 tree)
- Alcaligenes (isolates:63; rSTs:58 tree)
- Alcaligenes ammonioxydans (isolates:2; rSTs:2)
- Alcaligenes aquatilis (isolates:4; rSTs:4 tree)
- Alcaligenes endophyticus (isolates:2; rSTs:1)
- Alcaligenes faecalis (isolates:32; rSTs:18 tree)
- Alcaligenes nematophilus (isolates:6; rSTs:2)
- Alcaligenes pakistanensis (isolates:1; rSTs:1)
- Alcaligenes parafaecalis (isolates:1; rSTs:1)
- Alcaligenes phenolicus (isolates:2; rSTs:1)
- Alcaligenes sp. (isolates:13; rSTs:28 tree)
- Allopusillimonas (isolates:4; rSTs:3 tree)
- Basilea (isolates:2; rSTs:1)
- Basilea psittacipulmonis (isolates:2; rSTs:1)
- Bordetella (isolates:1932; rSTs:217 tree)
- Bordetella ansorpii (isolates:3; rSTs:2)
- Bordetella avium (isolates:31; rSTs:9 tree)
- Bordetella bronchialis (isolates:2; rSTs:2)
- Bordetella bronchiseptica (isolates:145; rSTs:74 tree)
- Bordetella flabilis (isolates:1; rSTs:1)
- Bordetella genomosp. 1 (isolates:2; rSTs:2)
- Bordetella genomosp. 10 (isolates:1; rSTs:1)
- Bordetella genomosp. 11 (isolates:1; rSTs:1)
- Bordetella genomosp. 12 (isolates:1; rSTs:1)
- Bordetella genomosp. 13 (isolates:1; rSTs:1)
- Bordetella genomosp. 2 (isolates:1; rSTs:1)
- Bordetella genomosp. 4 (isolates:2; rSTs:2)
- Bordetella genomosp. 5 (isolates:2; rSTs:2)
- Bordetella genomosp. 7 (isolates:2; rSTs:2)
- Bordetella genomosp. 8 (isolates:1; rSTs:1)
- Bordetella genomosp. 9 (isolates:2; rSTs:2)
- Bordetella hinzii (isolates:35; rSTs:21 tree)
- Bordetella holmesii (isolates:102; rSTs:8 tree)
- Bordetella parapertussis (isolates:102; rSTs:7 tree)
- Bordetella pertussis (isolates:1452; rSTs:50 tree)
- Bordetella petrii (isolates:3; rSTs:3 tree)
- Bordetella pseudohinzii (isolates:8; rSTs:3 tree)
- Bordetella sp. (isolates:18; rSTs:11 tree)
- Bordetella trematum (isolates:14; rSTs:10 tree)
- Brackiella (isolates:1; rSTs:1)
- Brackiella oedipodis (isolates:1; rSTs:1)
- Candidimonas (isolates:3; rSTs:3 tree)
- Castellaniella (isolates:7; rSTs:6 tree)
- Corticimicrobacter (isolates:1; rSTs:1)
- Corticimicrobacter populi (isolates:1; rSTs:1)
- Derxia (isolates:2; rSTs:2)
- Eoetvoesiella (isolates:3; rSTs:1)
- Eoetvoesiella caeni (isolates:3; rSTs:1)
- Jezberella (isolates:1; rSTs:1)
- Jezberella montanilacus (isolates:1; rSTs:1)
- Kerstersia (isolates:17; rSTs:10 tree)
- Mesopusillimonas (isolates:1; rSTs:1)
- Mesopusillimonas faecipullorum (isolates:1; rSTs:1)
- Neopusillimonas (isolates:2; rSTs:2)
- Neopusillimonas maritima (isolates:2; rSTs:2)
- Oligella (isolates:21; rSTs:15 tree)
- Orrella (isolates:4; rSTs:4 tree)
- Paenalcaligenes (isolates:5; rSTs:4 tree)
- Paracandidimonas (isolates:1; rSTs:1)
- Paracandidimonas soli (isolates:1; rSTs:1)
- Paralcaligenes (isolates:2; rSTs:2)
- Parapusillimonas (isolates:2; rSTs:1)
- Parapusillimonas granuli (isolates:2; rSTs:1)
- Parvibium (isolates:1; rSTs:1)
- Parvibium lacunae (isolates:1; rSTs:1)
- Pelistega (isolates:8; rSTs:7 tree)
- Pigmentiphaga (isolates:11; rSTs:10 tree)
- Pollutimonas (isolates:6; rSTs:5 tree)
- Pusillimonas (isolates:13; rSTs:11 tree)
- Sheuella (isolates:1; rSTs:1)
- Sheuella amnicola (isolates:1; rSTs:1)
- Taylorella (isolates:49; rSTs:23 tree)
- Verticiella (isolates:2; rSTs:2)
- Zwartia (isolates:2; rSTs:2)
- Achromobacter (isolates:347; rSTs:248 tree)
- Burkholderiaceae (isolates:6879; rSTs:3479)
- Burkholderia (isolates:5210; rSTs:2376)
- Burkholderia aenigmatica (isolates:27; rSTs:8 tree)
- Burkholderia alba (isolates:1; rSTs:1)
- Burkholderia ambifaria (isolates:96; rSTs:54 tree)
- Burkholderia anthina (isolates:19; rSTs:16 tree)
- Burkholderia arboris (isolates:6; rSTs:6 tree)
- Burkholderia catarinensis (isolates:1; rSTs:1)
- Burkholderia cenocepacia (isolates:446; rSTs:167 tree)
- Burkholderia cepacia (isolates:120; rSTs:73 tree)
- Burkholderia contaminans (isolates:129; rSTs:36 tree)
- Burkholderia diffusa (isolates:11; rSTs:8 tree)
- Burkholderia dolosa (isolates:41; rSTs:14 tree)
- Burkholderia gladioli (isolates:303; rSTs:208 tree)
- Burkholderia glumae (isolates:70; rSTs:19 tree)
- Burkholderia guangdongensis (isolates:1; rSTs:1)
- Burkholderia humptydooensis (isolates:7; rSTs:2)
- Burkholderia lata (isolates:14; rSTs:13 tree)
- Burkholderia latens (isolates:9; rSTs:7 tree)
- Burkholderia mallei (isolates:111; rSTs:15 tree)
- Burkholderia mayonis (isolates:2; rSTs:2)
- Burkholderia metallica (isolates:9; rSTs:7 tree)
- Burkholderia multivorans (isolates:636; rSTs:247 tree)
- Burkholderia oklahomensis (isolates:12; rSTs:3 tree)
- Burkholderia orbicola (isolates:36; rSTs:19 tree)
- Burkholderia paludis (isolates:3; rSTs:2)
- Burkholderia perseverans (isolates:1; rSTs:1)
- Burkholderia plantarii (isolates:7; rSTs:5 tree)
- Burkholderia pseudomallei (isolates:2022; rSTs:618 tree)
- Burkholderia pseudomultivorans (isolates:23; rSTs:14 tree)
- Burkholderia puraquae (isolates:2; rSTs:1)
- Burkholderia pyrrocinia (isolates:18; rSTs:14 tree)
- Burkholderia reimsis (isolates:1; rSTs:1)
- Burkholderia savannae (isolates:4; rSTs:4 tree)
- Burkholderia semiarida (isolates:4; rSTs:3 tree)
- Burkholderia seminalis (isolates:18; rSTs:15 tree)
- Burkholderia singularis (isolates:2; rSTs:2)
- Burkholderia sola (isolates:1; rSTs:1)
- Burkholderia sp. (isolates:229; rSTs:306 tree)
- Burkholderia stabilis (isolates:24; rSTs:9 tree)
- Burkholderia stagnalis (isolates:106; rSTs:29 tree)
- Burkholderia territorii (isolates:47; rSTs:30 tree)
- Burkholderia thailandensis (isolates:75; rSTs:33 tree)
- Burkholderia ubonensis (isolates:312; rSTs:214 tree)
- Burkholderia vietnamiensis (isolates:199; rSTs:142 tree)
- Candidatus Burkholderia brachyanthoides (isolates:1; rSTs:1)
- Candidatus Burkholderia crenata (isolates:1; rSTs:1)
- Candidatus Burkholderia humilis (isolates:1; rSTs:1)
- Candidatus Burkholderia pumila (isolates:1; rSTs:1)
- Candidatus Burkholderia verschuerenii (isolates:1; rSTs:1)
- Caballeronia (isolates:115; rSTs:99 tree)
- Caballeronia arationis (isolates:2; rSTs:2)
- Caballeronia arvi (isolates:1; rSTs:1)
- Caballeronia calidae (isolates:1; rSTs:1)
- Caballeronia catudaia (isolates:1; rSTs:1)
- Caballeronia choica (isolates:1; rSTs:1)
- Caballeronia concitans (isolates:1; rSTs:1)
- Caballeronia cordobensis (isolates:2; rSTs:1)
- Caballeronia fortuita (isolates:1; rSTs:1)
- Caballeronia glathei (isolates:2; rSTs:1)
- Caballeronia glebae (isolates:1; rSTs:1)
- Caballeronia grimmiae (isolates:3; rSTs:2)
- Caballeronia humi (isolates:1; rSTs:1)
- Caballeronia hypogeia (isolates:1; rSTs:1)
- Caballeronia insecticola (isolates:1; rSTs:1)
- Caballeronia jiangsuensis (isolates:1; rSTs:1)
- Caballeronia megalochromosomata (isolates:1; rSTs:1)
- Caballeronia mineralivorans (isolates:1; rSTs:1)
- Caballeronia novacaledonica (isolates:1; rSTs:1)
- Caballeronia pedi (isolates:1; rSTs:1)
- Caballeronia peredens (isolates:1; rSTs:1)
- Caballeronia ptereochthonis (isolates:1; rSTs:1)
- Caballeronia sordidicola (isolates:4; rSTs:3 tree)
- Caballeronia sp. (isolates:69; rSTs:57 tree)
- Caballeronia telluris (isolates:1; rSTs:1)
- Caballeronia temeraria (isolates:1; rSTs:1)
- Caballeronia terrestris (isolates:1; rSTs:1)
- Caballeronia turbans (isolates:1; rSTs:1)
- Caballeronia udeis (isolates:6; rSTs:6 tree)
- Caballeronia zhejiangensis (isolates:6; rSTs:6 tree)
- Candidatus Glomeribacter (isolates:3; rSTs:1)
- Candidatus Glomeribacter gigasporarum (isolates:3; rSTs:1)
- Candidatus Vallotia (isolates:4; rSTs:4 tree)
- Chitinasiproducens (isolates:1; rSTs:1)
- Chitinasiproducens palmae (isolates:1; rSTs:1)
- Cupriavidus (isolates:155; rSTs:131 tree)
- Cupriavidus agavae (isolates:1; rSTs:1)
- Cupriavidus alkaliphilus (isolates:6; rSTs:6 tree)
- Cupriavidus basilensis (isolates:7; rSTs:5 tree)
- Cupriavidus campinensis (isolates:4; rSTs:3 tree)
- Cupriavidus cauae (isolates:2; rSTs:2)
- Cupriavidus gilardii (isolates:14; rSTs:8 tree)
- Cupriavidus lacunae (isolates:1; rSTs:1)
- Cupriavidus laharis (isolates:1; rSTs:1)
- Cupriavidus malaysiensis (isolates:1; rSTs:1)
- Cupriavidus metallidurans (isolates:16; rSTs:9 tree)
- Cupriavidus nantongensis (isolates:2; rSTs:2)
- Cupriavidus necator (isolates:13; rSTs:6 tree)
- Cupriavidus neocaledonicus (isolates:3; rSTs:2)
- Cupriavidus numazuensis (isolates:1; rSTs:1)
- Cupriavidus oxalaticus (isolates:7; rSTs:3 tree)
- Cupriavidus pampae (isolates:1; rSTs:1)
- Cupriavidus pauculus (isolates:7; rSTs:4 tree)
- Cupriavidus pinatubonensis (isolates:4; rSTs:4 tree)
- Cupriavidus plantarum (isolates:6; rSTs:5 tree)
- Cupriavidus respiraculi (isolates:2; rSTs:2)
- Cupriavidus sp. (isolates:46; rSTs:59 tree)
- Cupriavidus taiwanensis (isolates:9; rSTs:4 tree)
- Cupriavidus yeoncheonensis (isolates:1; rSTs:1)
- Ephemeroptericola (isolates:1; rSTs:1)
- Ephemeroptericola cinctiostellae (isolates:1; rSTs:1)
- Formosimonas (isolates:1; rSTs:1)
- Formosimonas limnophila (isolates:1; rSTs:1)
- Hydromonas (isolates:1; rSTs:1)
- Hydromonas duriensis (isolates:1; rSTs:1)
- Lautropia (isolates:4; rSTs:3 tree)
- Limnobacter (isolates:11; rSTs:10 tree)
- Mycetohabitans (isolates:10; rSTs:8 tree)
- Mycoavidus (isolates:5; rSTs:4 tree)
- Pandoraea (isolates:95; rSTs:73 tree)
- Candidatus Pandoraea novymonadis (isolates:1; rSTs:1)
- Pandoraea anapnoica (isolates:1; rSTs:1)
- Pandoraea anhela (isolates:1; rSTs:1)
- Pandoraea apista (isolates:23; rSTs:14 tree)
- Pandoraea aquatica (isolates:1; rSTs:1)
- Pandoraea bronchicola (isolates:1; rSTs:1)
- Pandoraea capi (isolates:2; rSTs:2)
- Pandoraea captiosa (isolates:1; rSTs:1)
- Pandoraea cepalis (isolates:4; rSTs:3 tree)
- Pandoraea commovens (isolates:2; rSTs:2)
- Pandoraea communis (isolates:3; rSTs:3 tree)
- Pandoraea eparura (isolates:1; rSTs:1)
- Pandoraea faecigallinarum (isolates:1; rSTs:1)
- Pandoraea fibrosis (isolates:3; rSTs:2)
- Pandoraea horticolens (isolates:1; rSTs:1)
- Pandoraea iniqua (isolates:2; rSTs:2)
- Pandoraea morbifera (isolates:1; rSTs:1)
- Pandoraea norimbergensis (isolates:1; rSTs:1)
- Pandoraea nosoerga (isolates:4; rSTs:3 tree)
- Pandoraea oxalativorans (isolates:1; rSTs:1)
- Pandoraea pneumonica (isolates:1; rSTs:1)
- Pandoraea pnomenusa (isolates:10; rSTs:8 tree)
- Pandoraea pulmonicola (isolates:2; rSTs:1)
- Pandoraea soli (isolates:1; rSTs:1)
- Pandoraea sp. (isolates:11; rSTs:8 tree)
- Pandoraea sputorum (isolates:10; rSTs:7 tree)
- Pandoraea terrae (isolates:1; rSTs:1)
- Pandoraea terrigena (isolates:1; rSTs:1)
- Pandoraea thiooxydans (isolates:2; rSTs:1)
- Pandoraea vervacti (isolates:1; rSTs:1)
- Paraburkholderia (isolates:387; rSTs:306 tree)
- Candidatus Paraburkholderia calva (isolates:1; rSTs:1)
- Candidatus Paraburkholderia kirkii (isolates:1; rSTs:1)
- Paraburkholderia acidicola (isolates:1; rSTs:1)
- Paraburkholderia acidipaludis (isolates:1; rSTs:1)
- Paraburkholderia acidiphila (isolates:1; rSTs:1)
- Paraburkholderia acidisoli (isolates:1; rSTs:1)
- Paraburkholderia adhaesiva (isolates:1; rSTs:1)
- Paraburkholderia agricolaris (isolates:1; rSTs:1)
- Paraburkholderia antibiotica (isolates:1; rSTs:1)
- Paraburkholderia aromaticivorans (isolates:1; rSTs:1)
- Paraburkholderia aspalathi (isolates:13; rSTs:7 tree)
- Paraburkholderia atlantica (isolates:7; rSTs:7 tree)
- Paraburkholderia azotifigens (isolates:1; rSTs:1)
- Paraburkholderia bannensis (isolates:9; rSTs:8 tree)
- Paraburkholderia bonniea (isolates:3; rSTs:2)
- Paraburkholderia bryophila (isolates:6; rSTs:4 tree)
- Paraburkholderia caballeronis (isolates:9; rSTs:3 tree)
- Paraburkholderia caffeinilytica (isolates:3; rSTs:1)
- Paraburkholderia caffeinitolerans (isolates:1; rSTs:1)
- Paraburkholderia caledonica (isolates:3; rSTs:2)
- Paraburkholderia caribensis (isolates:12; rSTs:8 tree)
- Paraburkholderia diazotrophica (isolates:1; rSTs:1)
- Paraburkholderia dilworthii (isolates:1; rSTs:1)
- Paraburkholderia dinghuensis (isolates:1; rSTs:1)
- Paraburkholderia dioscoreae (isolates:1; rSTs:1)
- Paraburkholderia dipogonis (isolates:1; rSTs:1)
- Paraburkholderia domus (isolates:7; rSTs:5 tree)
- Paraburkholderia eburnea (isolates:2; rSTs:1)
- Paraburkholderia edwinii (isolates:1; rSTs:1)
- Paraburkholderia elongata (isolates:1; rSTs:1)
- Paraburkholderia ferrariae (isolates:1; rSTs:1)
- Paraburkholderia flagellata (isolates:1; rSTs:1)
- Paraburkholderia flava (isolates:1; rSTs:1)
- Paraburkholderia franconis (isolates:1; rSTs:1)
- Paraburkholderia fungorum (isolates:15; rSTs:10 tree)
- Paraburkholderia fynbosensis (isolates:1; rSTs:1)
- Paraburkholderia gardini (isolates:2; rSTs:2)
- Paraburkholderia ginsengisoli (isolates:2; rSTs:1)
- Paraburkholderia ginsengiterrae (isolates:2; rSTs:2)
- Paraburkholderia graminis (isolates:7; rSTs:6 tree)
- Paraburkholderia guartelaensis (isolates:2; rSTs:2)
- Paraburkholderia haematera (isolates:1; rSTs:1)
- Paraburkholderia hayleyella (isolates:1; rSTs:1)
- Paraburkholderia heleia (isolates:2; rSTs:2)
- Paraburkholderia hiiakae (isolates:1; rSTs:1)
- Paraburkholderia hospita (isolates:10; rSTs:7 tree)
- Paraburkholderia humisilvae (isolates:1; rSTs:1)
- Paraburkholderia kirstenboschensis (isolates:4; rSTs:3 tree)
- Paraburkholderia kururiensis (isolates:8; rSTs:4 tree)
- Paraburkholderia lacunae (isolates:1; rSTs:1)
- Paraburkholderia lycopersici (isolates:1; rSTs:1)
- Paraburkholderia madseniana (isolates:6; rSTs:4 tree)
- Paraburkholderia megapolitana (isolates:4; rSTs:2)
- Paraburkholderia metrosideri (isolates:1; rSTs:1)
- Paraburkholderia mimosarum (isolates:4; rSTs:2)
- Paraburkholderia monticola (isolates:1; rSTs:1)
- Paraburkholderia nemoris (isolates:6; rSTs:6 tree)
- Paraburkholderia nodosa (isolates:1; rSTs:1)
- Paraburkholderia oxyphila (isolates:1; rSTs:1)
- Paraburkholderia pallida (isolates:1; rSTs:1)
- Paraburkholderia panacisoli (isolates:1; rSTs:1)
- Paraburkholderia phenazinium (isolates:8; rSTs:6 tree)
- Paraburkholderia phenoliruptrix (isolates:11; rSTs:7 tree)
- Paraburkholderia phosphatilytica (isolates:1; rSTs:1)
- Paraburkholderia phymatum (isolates:2; rSTs:1)
- Paraburkholderia phytofirmans (isolates:1; rSTs:1)
- Paraburkholderia piptadeniae (isolates:1; rSTs:1)
- Paraburkholderia podalyriae (isolates:1; rSTs:1)
- Paraburkholderia polaris (isolates:1; rSTs:1)
- Paraburkholderia rhizosphaerae (isolates:1; rSTs:1)
- Paraburkholderia rhynchosiae (isolates:2; rSTs:1)
- Paraburkholderia ribeironis (isolates:1; rSTs:1)
- Paraburkholderia sabiae (isolates:3; rSTs:2)
- Paraburkholderia sacchari (isolates:3; rSTs:2)
- Paraburkholderia saeva (isolates:3; rSTs:3 tree)
- Paraburkholderia sartisoli (isolates:1; rSTs:1)
- Paraburkholderia sediminicola (isolates:1; rSTs:1)
- Paraburkholderia silvatlantica (isolates:5; rSTs:3 tree)
- Paraburkholderia silviterrae (isolates:1; rSTs:1)
- Paraburkholderia solisilvae (isolates:1; rSTs:1)
- Paraburkholderia solitsugae (isolates:1; rSTs:1)
- Paraburkholderia sp. (isolates:83; rSTs:80 tree)
- Paraburkholderia sprentiae (isolates:1; rSTs:1)
- Paraburkholderia steynii (isolates:1; rSTs:1)
- Paraburkholderia strydomiana (isolates:3; rSTs:3 tree)
- Paraburkholderia susongensis (isolates:1; rSTs:1)
- Paraburkholderia tagetis (isolates:1; rSTs:1)
- Paraburkholderia terrae (isolates:5; rSTs:4 tree)
- Paraburkholderia terricola (isolates:7; rSTs:6 tree)
- Paraburkholderia tropica (isolates:37; rSTs:22 tree)
- Paraburkholderia tuberum (isolates:3; rSTs:2)
- Paraburkholderia ultramafica (isolates:1; rSTs:1)
- Paraburkholderia unamae (isolates:3; rSTs:3 tree)
- Paraburkholderia xenovorans (isolates:3; rSTs:2)
- Paraburkholderia youngii (isolates:5; rSTs:5 tree)
- Pararobbsia (isolates:2; rSTs:2)
- Paucimonas (isolates:1; rSTs:1)
- Paucimonas lemoignei (isolates:1; rSTs:1)
- Polynucleobacter (isolates:253; rSTs:223 tree)
- Polynucleobacter acidiphobus (isolates:1; rSTs:1)
- Polynucleobacter aenigmaticus (isolates:1; rSTs:1)
- Polynucleobacter alcilacus (isolates:1; rSTs:1)
- Polynucleobacter antarcticus (isolates:1; rSTs:1)
- Polynucleobacter arcticus (isolates:1; rSTs:1)
- Polynucleobacter asymbioticus (isolates:9; rSTs:6 tree)
- Polynucleobacter bastaniensis (isolates:1; rSTs:1)
- Polynucleobacter brandtiae (isolates:1; rSTs:1)
- Polynucleobacter campilacus (isolates:1; rSTs:1)
- Polynucleobacter corsicus (isolates:1; rSTs:1)
- Polynucleobacter cosmopolitanus (isolates:1; rSTs:1)
- Polynucleobacter difficilis (isolates:1; rSTs:1)
- Polynucleobacter duraquae (isolates:1; rSTs:1)
- Polynucleobacter finlandensis (isolates:1; rSTs:1)
- Polynucleobacter hallstattensis (isolates:1; rSTs:1)
- Polynucleobacter hirudinilacicola (isolates:1; rSTs:1)
- Polynucleobacter ibericus (isolates:1; rSTs:1)
- Polynucleobacter kasalickyi (isolates:1; rSTs:1)
- Polynucleobacter meluiroseus (isolates:1; rSTs:1)
- Polynucleobacter necessarius (isolates:1; rSTs:1)
- Polynucleobacter nymphae (isolates:1; rSTs:1)
- Polynucleobacter paludilacus (isolates:1; rSTs:1)
- Polynucleobacter paneuropaeus (isolates:113; rSTs:86 tree)
- Polynucleobacter parvulilacunae (isolates:1; rSTs:1)
- Polynucleobacter rarus (isolates:1; rSTs:1)
- Polynucleobacter sinensis (isolates:1; rSTs:1)
- Polynucleobacter sp. (isolates:89; rSTs:90 tree)
- Polynucleobacter sphagniphilus (isolates:11; rSTs:10 tree)
- Polynucleobacter tropicus (isolates:1; rSTs:1)
- Polynucleobacter victoriensis (isolates:1; rSTs:1)
- Polynucleobacter wuianus (isolates:2; rSTs:2)
- Polynucleobacter yangtzensis (isolates:3; rSTs:3 tree)
- Quisquiliibacterium (isolates:1; rSTs:1)
- Quisquiliibacterium transsilvanicum (isolates:1; rSTs:1)
- Ralstonia (isolates:589; rSTs:214 tree)
- Ralstonia chuxiongensis (isolates:2; rSTs:2)
- Ralstonia insidiosa (isolates:21; rSTs:7 tree)
- Ralstonia mannitolilytica (isolates:27; rSTs:16 tree)
- Ralstonia mojiangensis (isolates:5; rSTs:5 tree)
- Ralstonia pickettii (isolates:90; rSTs:20 tree)
- Ralstonia pseudosolanacearum (isolates:104; rSTs:59 tree)
- Ralstonia solanacearum (isolates:284; rSTs:64 tree)
- Ralstonia soli (isolates:1; rSTs:1)
- Ralstonia sp. (isolates:42; rSTs:31 tree)
- Ralstonia syzygii (isolates:8; rSTs:4 tree)
- Ralstonia wenshanensis (isolates:5; rSTs:5 tree)
- Robbsia (isolates:6; rSTs:4 tree)
- Trinickia (isolates:22; rSTs:13 tree)
- Trinickia acidisoli (isolates:1; rSTs:1)
- Trinickia caryophylli (isolates:7; rSTs:1)
- Trinickia dabaoshanensis (isolates:1; rSTs:1)
- Trinickia diaoshuihuensis (isolates:1; rSTs:1)
- Trinickia dinghuensis (isolates:1; rSTs:1)
- Trinickia fusca (isolates:1; rSTs:1)
- Trinickia mobilis (isolates:1; rSTs:1)
- Trinickia soli (isolates:2; rSTs:1)
- Trinickia sp. (isolates:1; rSTs:1)
- Trinickia symbiotica (isolates:4; rSTs:2)
- Trinickia terrae (isolates:1; rSTs:1)
- Trinickia violacea (isolates:1; rSTs:1)
- Zeimonas (isolates:2; rSTs:2)
- Burkholderia (isolates:5210; rSTs:2376)
- Comamonadaceae (isolates:796; rSTs:647 tree)
- Acidovorax (isolates:93; rSTs:76 tree)
- Acidovorax benzenivorans (isolates:1)
- Acidovorax carolinensis (isolates:4; rSTs:3 tree)
- Acidovorax defluvii (isolates:1; rSTs:1)
- Acidovorax delafieldii (isolates:2; rSTs:1)
- Acidovorax facilis (isolates:1; rSTs:1)
- Acidovorax kalamii (isolates:2; rSTs:2)
- Acidovorax radicis (isolates:2; rSTs:1)
- Acidovorax soli (isolates:1; rSTs:1)
- Acidovorax sp. (isolates:75; rSTs:62 tree)
- Acidovorax temperans (isolates:4; rSTs:4 tree)
- Albitalea (isolates:1; rSTs:1)
- Albitalea terrae (isolates:1; rSTs:1)
- Alicycliphilus (isolates:7; rSTs:7 tree)
- Allofranklinella (isolates:3; rSTs:3 tree)
- Brachymonas (isolates:6; rSTs:6 tree)
- Caenimonas (isolates:5; rSTs:5 tree)
- Candidatus Symbiobacter (isolates:1; rSTs:1)
- Candidatus Symbiobacter mobilis (isolates:1; rSTs:1)
- Comamonas (isolates:153; rSTs:108 tree)
- Comamonas antarctica (isolates:1; rSTs:1)
- Comamonas aquatica (isolates:31; rSTs:21 tree)
- Comamonas avium (isolates:1; rSTs:1)
- Comamonas badia (isolates:1; rSTs:1)
- Comamonas composti (isolates:1; rSTs:1)
- Comamonas denitrificans (isolates:1; rSTs:1)
- Comamonas flocculans (isolates:1; rSTs:1)
- Comamonas fluminis (isolates:1; rSTs:1)
- Comamonas granuli (isolates:1; rSTs:1)
- Comamonas jiangduensis (isolates:2; rSTs:1)
- Comamonas kerstersii (isolates:7; rSTs:3 tree)
- Comamonas koreensis (isolates:2; rSTs:2)
- Comamonas odontotermitis (isolates:3; rSTs:2)
- Comamonas phosphati (isolates:1; rSTs:1)
- Comamonas piscis (isolates:2; rSTs:1)
- Comamonas resistens (isolates:2)
- Comamonas sediminis (isolates:1; rSTs:1)
- Comamonas serinivorans (isolates:1; rSTs:1)
- Comamonas sp. (isolates:30; rSTs:29 tree)
- Comamonas suwonensis (isolates:1; rSTs:1)
- Comamonas terrae (isolates:1; rSTs:1)
- Comamonas terrigena (isolates:10; rSTs:6 tree)
- Comamonas testosteroni (isolates:18; rSTs:11 tree)
- Comamonas thiooxydans (isolates:33; rSTs:19 tree)
- Corticibacter (isolates:2; rSTs:1)
- Corticibacter populi (isolates:2; rSTs:1)
- Curvibacter (isolates:6; rSTs:6 tree)
- Delftia (isolates:72; rSTs:59 tree)
- Diaphorobacter (isolates:15; rSTs:12 tree)
- Extensimonas (isolates:5; rSTs:3 tree)
- Giesbergeria (isolates:1; rSTs:1)
- Giesbergeria anulus (isolates:1; rSTs:1)
- Hydrogenophaga (isolates:36; rSTs:27 tree)
- Hydrogenophaga aromaticivorans (isolates:2; rSTs:2)
- Hydrogenophaga borbori (isolates:1; rSTs:1)
- Hydrogenophaga crassostreae (isolates:2; rSTs:1)
- Hydrogenophaga crocea (isolates:1; rSTs:1)
- Hydrogenophaga electricum (isolates:1; rSTs:1)
- Hydrogenophaga flava (isolates:1; rSTs:1)
- Hydrogenophaga intermedia (isolates:3; rSTs:1)
- Hydrogenophaga laconesensis (isolates:2; rSTs:1)
- Hydrogenophaga palleronii (isolates:1; rSTs:1)
- Hydrogenophaga pseudoflava (isolates:2; rSTs:2)
- Hydrogenophaga sp. (isolates:17; rSTs:13 tree)
- Hydrogenophaga taeniospiralis (isolates:3; rSTs:2)
- Hylemonella (isolates:3; rSTs:3 tree)
- Lampropedia (isolates:5; rSTs:5 tree)
- Limnohabitans (isolates:37; rSTs:34 tree)
- Macromonas (isolates:2; rSTs:2)
- Malikia (isolates:3; rSTs:3 tree)
- Melaminivora (isolates:5; rSTs:4 tree)
- Oryzisolibacter (isolates:1; rSTs:1)
- Oryzisolibacter propanilivorax (isolates:1; rSTs:1)
- Ottowia (isolates:8; rSTs:7 tree)
- Paenacidovorax (isolates:3; rSTs:2)
- Paracidovorax (isolates:40; rSTs:22 tree)
- Paracidovorax anthurii (isolates:1; rSTs:1)
- Paracidovorax avenae (isolates:8; rSTs:6 tree)
- Paracidovorax cattleyae (isolates:3; rSTs:2)
- Paracidovorax citrulli (isolates:22; rSTs:7 tree)
- Paracidovorax konjaci (isolates:1; rSTs:1)
- Paracidovorax oryzae (isolates:2; rSTs:2)
- Paracidovorax valerianellae (isolates:2; rSTs:2)
- Paracidovorax wautersii (isolates:1; rSTs:1)
- Polaromonas (isolates:23; rSTs:21 tree)
- Pseudacidovorax (isolates:5; rSTs:4 tree)
- Pseudorhodoferax (isolates:5; rSTs:5 tree)
- Pulveribacter (isolates:1; rSTs:1)
- Pulveribacter suum (isolates:1; rSTs:1)
- Ramlibacter (isolates:22; rSTs:22 tree)
- Ramlibacter agri (isolates:1; rSTs:1)
- Ramlibacter albus (isolates:1; rSTs:1)
- Ramlibacter algicola (isolates:1; rSTs:1)
- Ramlibacter alkalitolerans (isolates:1; rSTs:1)
- Ramlibacter aquaticus (isolates:1; rSTs:1)
- Ramlibacter aurantiacus (isolates:1; rSTs:1)
- Ramlibacter cellulosilyticus (isolates:1; rSTs:1)
- Ramlibacter ginsenosidimutans (isolates:1; rSTs:1)
- Ramlibacter henchirensis (isolates:1; rSTs:1)
- Ramlibacter humi (isolates:1; rSTs:1)
- Ramlibacter lithotrophicus (isolates:1; rSTs:1)
- Ramlibacter montanisoli (isolates:1; rSTs:1)
- Ramlibacter monticola (isolates:1; rSTs:1)
- Ramlibacter pallidus (isolates:1; rSTs:1)
- Ramlibacter paludis (isolates:1; rSTs:1)
- Ramlibacter pinisoli (isolates:1; rSTs:1)
- Ramlibacter rhizophilus (isolates:1; rSTs:1)
- Ramlibacter sp. (isolates:4; rSTs:4 tree)
- Ramlibacter tataouinensis (isolates:1; rSTs:1)
- Rhodoferax (isolates:28; rSTs:26 tree)
- Rhodoferax antarcticus (isolates:3; rSTs:3 tree)
- Rhodoferax aquaticus (isolates:1; rSTs:1)
- Rhodoferax bucti (isolates:1; rSTs:1)
- Rhodoferax fermentans (isolates:2; rSTs:1)
- Rhodoferax ferrireducens (isolates:3; rSTs:3 tree)
- Rhodoferax koreense (isolates:1; rSTs:1)
- Rhodoferax lacus (isolates:1; rSTs:1)
- Rhodoferax saidenbachensis (isolates:2; rSTs:1)
- Rhodoferax sediminis (isolates:1; rSTs:1)
- Rhodoferax sp. (isolates:13; rSTs:13 tree)
- Serpentinimonas (isolates:4; rSTs:4 tree)
- Simplicispira (isolates:8; rSTs:6 tree)
- Tibeticola (isolates:1; rSTs:1)
- Tibeticola sediminis (isolates:1; rSTs:1)
- Vandammella (isolates:8; rSTs:7 tree)
- Variovorax (isolates:152; rSTs:136 tree)
- Variovorax beijingensis (isolates:3; rSTs:3 tree)
- Variovorax boronicumulans (isolates:13; rSTs:11 tree)
- Variovorax dokdonensis (isolates:1; rSTs:1)
- Variovorax ginsengisoli (isolates:1; rSTs:1)
- Variovorax gossypii (isolates:1)
- Variovorax guangxiensis (isolates:2; rSTs:2)
- Variovorax paradoxus (isolates:10; rSTs:9 tree)
- Variovorax soli (isolates:1; rSTs:1)
- Variovorax sp. (isolates:120; rSTs:108 tree)
- Verminephrobacter (isolates:23; rSTs:12 tree)
- Xenophilus (isolates:3; rSTs:3 tree)
- Acidovorax (isolates:93; rSTs:76 tree)
- Oxalobacteraceae (isolates:510; rSTs:417 tree)
- Actimicrobium (isolates:4; rSTs:3 tree)
- Collimonas (isolates:17; rSTs:18 tree)
- Collimonas antrihumi (isolates:1; rSTs:1)
- Collimonas arenae (isolates:2; rSTs:1)
- Collimonas fungivorans (isolates:3; rSTs:3 tree)
- Collimonas humicola (isolates:2; rSTs:2)
- Collimonas pratensis (isolates:3; rSTs:3 tree)
- Collimonas silvisoli (isolates:1; rSTs:1)
- Collimonas sp. (isolates:5; rSTs:7 tree)
- Duganella (isolates:54; rSTs:39 tree)
- Duganella aceris (isolates:1; rSTs:1)
- Duganella alba (isolates:2; rSTs:1)
- Duganella aquatilis (isolates:1; rSTs:1)
- Duganella callida (isolates:1; rSTs:1)
- Duganella dendranthematis (isolates:1; rSTs:1)
- Duganella fentianensis (isolates:1; rSTs:1)
- Duganella flavida (isolates:1; rSTs:1)
- Duganella guangzhouensis (isolates:1; rSTs:1)
- Duganella lactea (isolates:2; rSTs:2)
- Duganella levis (isolates:1; rSTs:1)
- Duganella margarita (isolates:2; rSTs:2)
- Duganella phyllosphaerae (isolates:1; rSTs:1)
- Duganella qianjiadongensis (isolates:1; rSTs:1)
- Duganella radicis (isolates:1; rSTs:1)
- Duganella rivi (isolates:1; rSTs:1)
- Duganella sacchari (isolates:1; rSTs:1)
- Duganella sp. (isolates:28; rSTs:16 tree)
- Duganella violaceicalia (isolates:2; rSTs:1)
- Duganella vulcania (isolates:3; rSTs:3 tree)
- Duganella zoogloeoides (isolates:2; rSTs:1)
- Glaciimonas (isolates:9; rSTs:6 tree)
- Herbaspirillum (isolates:83; rSTs:61 tree)
- Herbaspirillum aquaticum (isolates:2; rSTs:2)
- Herbaspirillum autotrophicum (isolates:1; rSTs:1)
- Herbaspirillum camelliae (isolates:1; rSTs:1)
- Herbaspirillum chlorophenolicum (isolates:2; rSTs:1)
- Herbaspirillum frisingense (isolates:4; rSTs:4 tree)
- Herbaspirillum hiltneri (isolates:2; rSTs:2)
- Herbaspirillum huttiense (isolates:9; rSTs:8 tree)
- Herbaspirillum lusitanum (isolates:2; rSTs:2)
- Herbaspirillum rhizosphaerae (isolates:1; rSTs:1)
- Herbaspirillum robiniae (isolates:3; rSTs:3 tree)
- Herbaspirillum rubrisubalbicans (isolates:9; rSTs:3 tree)
- Herbaspirillum seropedicae (isolates:7; rSTs:5 tree)
- Herbaspirillum sp. (isolates:40; rSTs:28 tree)
- Herminiimonas (isolates:7; rSTs:5 tree)
- Janthinobacterium (isolates:112; rSTs:90 tree)
- Janthinobacterium agaricidamnosum (isolates:2; rSTs:1)
- Janthinobacterium kumbetense (isolates:1; rSTs:1)
- Janthinobacterium lividum (isolates:20; rSTs:14 tree)
- Janthinobacterium psychrotolerans (isolates:1; rSTs:1)
- Janthinobacterium rivuli (isolates:1; rSTs:1)
- Janthinobacterium sp. (isolates:83; rSTs:68 tree)
- Janthinobacterium svalbardensis (isolates:1; rSTs:1)
- Janthinobacterium tructae (isolates:2; rSTs:2)
- Janthinobacterium violaceinigrum (isolates:1; rSTs:1)
- Lacisediminimonas (isolates:1; rSTs:1)
- Lacisediminimonas profundi (isolates:1; rSTs:1)
- Massilia (isolates:97; rSTs:92 tree)
- Massilia agilis (isolates:1; rSTs:1)
- Massilia agri (isolates:1; rSTs:1)
- Massilia agrisoli (isolates:1; rSTs:1)
- Massilia alkalitolerans (isolates:1; rSTs:1)
- Massilia antarctica (isolates:2; rSTs:2)
- Massilia arenae (isolates:1; rSTs:1)
- Massilia arenosa (isolates:1; rSTs:1)
- Massilia atriviolacea (isolates:1; rSTs:1)
- Massilia aurea (isolates:2; rSTs:2)
- Massilia brevitalea (isolates:1; rSTs:1)
- Massilia cavernae (isolates:1; rSTs:1)
- Massilia eburnea (isolates:1; rSTs:1)
- Massilia eurypsychrophila (isolates:1; rSTs:1)
- Massilia forsythiae (isolates:1; rSTs:1)
- Massilia frigida (isolates:1; rSTs:1)
- Massilia genomosp. 1 (isolates:1; rSTs:1)
- Massilia glaciei (isolates:1; rSTs:1)
- Massilia horti (isolates:1; rSTs:1)
- Massilia litorea (isolates:1)
- Massilia mucilaginosa (isolates:1; rSTs:1)
- Massilia niastensis (isolates:1; rSTs:1)
- Massilia norwichensis (isolates:1; rSTs:1)
- Massilia oculi (isolates:2; rSTs:2)
- Massilia phyllostachyos (isolates:1; rSTs:1)
- Massilia pinisoli (isolates:1; rSTs:1)
- Massilia polaris (isolates:1; rSTs:1)
- Massilia psychrophila (isolates:2; rSTs:1)
- Massilia puerhi (isolates:1)
- Massilia putida (isolates:1; rSTs:1)
- Massilia rhizosphaerae (isolates:1; rSTs:1)
- Massilia rubra (isolates:1; rSTs:1)
- Massilia soli (isolates:1; rSTs:1)
- Massilia solisilvae (isolates:1; rSTs:1)
- Massilia sp. (isolates:51; rSTs:49 tree)
- Massilia terrae (isolates:1; rSTs:1)
- Massilia timonae (isolates:3; rSTs:3 tree)
- Massilia varians (isolates:3; rSTs:3 tree)
- Massilia violaceinigra (isolates:1; rSTs:1)
- Massilia yuzhufengensis (isolates:1; rSTs:1)
- Noviherbaspirillum (isolates:19; rSTs:18 tree)
- Noviherbaspirillum aerium (isolates:1; rSTs:1)
- Noviherbaspirillum aridicola (isolates:1; rSTs:1)
- Noviherbaspirillum autotrophicum (isolates:1; rSTs:1)
- Noviherbaspirillum cavernae (isolates:1; rSTs:1)
- Noviherbaspirillum denitrificans (isolates:1; rSTs:1)
- Noviherbaspirillum galbum (isolates:1; rSTs:1)
- Noviherbaspirillum humi (isolates:1; rSTs:1)
- Noviherbaspirillum malthae (isolates:1; rSTs:1)
- Noviherbaspirillum massiliense (isolates:2; rSTs:1)
- Noviherbaspirillum pedocola (isolates:1; rSTs:1)
- Noviherbaspirillum saxi (isolates:1; rSTs:1)
- Noviherbaspirillum sedimenti (isolates:1; rSTs:1)
- Noviherbaspirillum soli (isolates:1; rSTs:1)
- Noviherbaspirillum sp. (isolates:4; rSTs:4 tree)
- Noviherbaspirillum suwonense (isolates:1; rSTs:1)
- Oxalicibacterium (isolates:3; rSTs:3 tree)
- Oxalobacter (isolates:20; rSTs:12 tree)
- Pseudoduganella (isolates:25; rSTs:19 tree)
- Pseudoduganella albidiflava (isolates:2; rSTs:1)
- Pseudoduganella aquatica (isolates:2; rSTs:2)
- Pseudoduganella armeniaca (isolates:1; rSTs:1)
- Pseudoduganella buxea (isolates:2; rSTs:1)
- Pseudoduganella danionis (isolates:1; rSTs:1)
- Pseudoduganella dura (isolates:2; rSTs:1)
- Pseudoduganella flava (isolates:2; rSTs:1)
- Pseudoduganella ginsengisoli (isolates:1; rSTs:1)
- Pseudoduganella guangdongensis (isolates:1; rSTs:1)
- Pseudoduganella lurida (isolates:1; rSTs:1)
- Pseudoduganella lutea (isolates:1; rSTs:1)
- Pseudoduganella namucuonensis (isolates:1; rSTs:1)
- Pseudoduganella plicata (isolates:2; rSTs:1)
- Pseudoduganella rivuli (isolates:1; rSTs:1)
- Pseudoduganella sp. (isolates:1; rSTs:1)
- Pseudoduganella umbonata (isolates:2; rSTs:1)
- Pseudoduganella violacea (isolates:1; rSTs:1)
- Pseudoduganella violaceinigra (isolates:1; rSTs:1)
- Rugamonas (isolates:9; rSTs:9 tree)
- Sapientia (isolates:1; rSTs:1)
- Sapientia aquatica (isolates:1; rSTs:1)
- Solimicrobium (isolates:1; rSTs:1)
- Solimicrobium silvestre (isolates:1; rSTs:1)
- Telluria (isolates:5; rSTs:4 tree)
- Undibacterium (isolates:43; rSTs:35 tree)
- Undibacterium amnicola (isolates:1; rSTs:1)
- Undibacterium aquatile (isolates:1; rSTs:1)
- Undibacterium baiyunense (isolates:1; rSTs:1)
- Undibacterium crateris (isolates:1; rSTs:1)
- Undibacterium curvum (isolates:1; rSTs:1)
- Undibacterium fentianense (isolates:1; rSTs:1)
- Undibacterium flavidum (isolates:1; rSTs:1)
- Undibacterium griseum (isolates:1; rSTs:1)
- Undibacterium hunanense (isolates:1; rSTs:1)
- Undibacterium jejuense (isolates:1; rSTs:1)
- Undibacterium luofuense (isolates:1; rSTs:1)
- Undibacterium macrobrachii (isolates:1; rSTs:1)
- Undibacterium nitidum (isolates:1; rSTs:1)
- Undibacterium oligocarboniphilum (isolates:2; rSTs:1)
- Undibacterium parvum (isolates:1; rSTs:1)
- Undibacterium pigrum (isolates:1; rSTs:1)
- Undibacterium rivi (isolates:1; rSTs:1)
- Undibacterium rugosum (isolates:2; rSTs:2)
- Undibacterium seohonense (isolates:1; rSTs:1)
- Undibacterium sp. (isolates:19; rSTs:12 tree)
- Undibacterium squillarum (isolates:1; rSTs:1)
- Undibacterium terreum (isolates:1; rSTs:1)
- Undibacterium umbellatum (isolates:1; rSTs:1)
- Sphaerotilaceae (isolates:159; rSTs:125 tree)
- Aquincola (isolates:4; rSTs:4 tree)
- Azohydromonas (isolates:7; rSTs:6 tree)
- Caldimonas (isolates:14; rSTs:11 tree)
- Caldimonas brevitalea (isolates:1; rSTs:1)
- Caldimonas caldifontis (isolates:1; rSTs:1)
- Caldimonas manganoxidans (isolates:1; rSTs:1)
- Caldimonas mangrovi (isolates:1; rSTs:1)
- Caldimonas taiwanensis (isolates:1; rSTs:1)
- Caldimonas tepidiphila (isolates:1; rSTs:1)
- Caldimonas thermodepolymerans (isolates:6; rSTs:3 tree)
- Schlegelella aquatica (isolates:1; rSTs:1)
- Schlegelella koreensis (isolates:1; rSTs:1)
- Ideonella (isolates:13; rSTs:11 tree)
- Ideonella alba (isolates:2; rSTs:2)
- Ideonella aquatica (isolates:1; rSTs:1)
- Ideonella azotifigens (isolates:2; rSTs:1)
- Ideonella benzenivorans (isolates:1; rSTs:1)
- Ideonella dechloratans (isolates:2; rSTs:2)
- Ideonella livida (isolates:1; rSTs:1)
- Ideonella oryzae (isolates:1; rSTs:1)
- Ideonella paludis (isolates:1; rSTs:1)
- Ideonella sp. (isolates:2; rSTs:1)
- Inhella (isolates:5; rSTs:4 tree)
- Leptothrix (isolates:2; rSTs:2 tree)
- Methylibium (isolates:6; rSTs:4 tree)
- Piscinibacter (isolates:8; rSTs:6 tree)
- Roseateles (isolates:70; rSTs:55 tree)
- Mitsuaria sp. (isolates:9; rSTs:5 tree)
- Paucibacter aquatile (isolates:2; rSTs:2)
- Paucibacter sp. (isolates:16; rSTs:14 tree)
- Pelomonas aquatica (isolates:2; rSTs:2)
- Pelomonas sp. (isolates:17; rSTs:15 tree)
- Roseateles albus (isolates:1)
- Roseateles amylovorans (isolates:1; rSTs:1)
- Roseateles aquatilis (isolates:1; rSTs:1)
- Roseateles asaccharophilus (isolates:2; rSTs:1)
- Roseateles chitinivorans (isolates:1; rSTs:1)
- Roseateles chitosanitabidus (isolates:1; rSTs:1)
- Roseateles depolymerans (isolates:2; rSTs:1)
- Roseateles koreensis (isolates:1)
- Roseateles noduli (isolates:1; rSTs:1)
- Roseateles oligotrophus (isolates:2; rSTs:2)
- Roseateles puraquae (isolates:2; rSTs:1)
- Roseateles saccharophilus (isolates:2; rSTs:1)
- Roseateles sp. (isolates:4; rSTs:4 tree)
- Roseateles terrae (isolates:2; rSTs:1)
- Roseateles toxinivorans (isolates:1; rSTs:1)
- Rubrivivax (isolates:19; rSTs:14 tree)
- Scleromatobacter (isolates:1; rSTs:1)
- Scleromatobacter humisilvae (isolates:1; rSTs:1)
- Sphaerotilus (isolates:10; rSTs:7 tree)
- Sutterellaceae (isolates:66; rSTs:48 tree)
- Dakarella (isolates:2; rSTs:1)
- Dakarella massiliensis (isolates:2; rSTs:1)
- Duodenibacillus (isolates:1; rSTs:1)
- Duodenibacillus massiliensis (isolates:1; rSTs:1)
- Mesosutterella (isolates:4; rSTs:4 tree)
- Parasutterella (isolates:21; rSTs:11 tree)
- Sutterella (isolates:35; rSTs:29 tree)
- Sutterella faecalis (isolates:1; rSTs:1)
- Sutterella massiliensis (isolates:1; rSTs:1)
- Sutterella megalosphaeroides (isolates:1; rSTs:1)
- Sutterella parvirubra (isolates:2; rSTs:1)
- Sutterella seckii (isolates:1; rSTs:1)
- Sutterella sp. (isolates:1; rSTs:3 tree)
- Sutterella wadsworthensis (isolates:28; rSTs:21 tree)
- Turicimonas (isolates:3; rSTs:2)
- Turicimonas muris (isolates:3; rSTs:2)
- Dakarella (isolates:2; rSTs:1)
- Alcaligenaceae (isolates:2524; rSTs:654 tree)
- Ferrovales (isolates:2; rSTs:2)
- Neisseriales (isolates:79213; rSTs:24211)
- Aquaspirillaceae (isolates:55; rSTs:30 tree)
- Chitinibacteraceae (isolates:56; rSTs:47 tree)
- Amantichitinum (isolates:1; rSTs:1)
- Amantichitinum ursilacus (isolates:1; rSTs:1)
- Andreprevotia (isolates:3; rSTs:3 tree)
- Chitinibacter (isolates:5; rSTs:5 tree)
- Chitinilyticum (isolates:3; rSTs:3 tree)
- Chitinimonas (isolates:13; rSTs:9 tree)
- Chitiniphilus (isolates:4; rSTs:2 tree)
- Chitinolyticbacter (isolates:2; rSTs:2)
- Deefgea (isolates:8; rSTs:7 tree)
- Formivibrio (isolates:1; rSTs:1)
- Formivibrio citricus (isolates:1; rSTs:1)
- Iodobacter (isolates:8; rSTs:6 tree)
- Jeongeupia (isolates:4; rSTs:4 tree)
- Silvimonas (isolates:4; rSTs:4 tree)
- Amantichitinum (isolates:1; rSTs:1)
- Chromobacteriaceae (isolates:126; rSTs:111 tree)
- Aquitalea (isolates:15; rSTs:11 tree)
- Chromobacterium (isolates:81; rSTs:72 tree)
- Chromobacterium alkanivorans (isolates:4; rSTs:2)
- Chromobacterium alticapitis (isolates:1; rSTs:1)
- Chromobacterium amazonense (isolates:2; rSTs:2)
- Chromobacterium aquaticum (isolates:1; rSTs:1)
- Chromobacterium haemolyticum (isolates:4; rSTs:3 tree)
- Chromobacterium paludis (isolates:1; rSTs:1)
- Chromobacterium phragmitis (isolates:2; rSTs:2)
- Chromobacterium piscinae (isolates:1; rSTs:1)
- Chromobacterium rhizoryzae (isolates:1; rSTs:1)
- Chromobacterium sinusclupearum (isolates:1; rSTs:1)
- Chromobacterium sp. (isolates:12; rSTs:20 tree)
- Chromobacterium sphagni (isolates:2; rSTs:2)
- Chromobacterium subtsugae (isolates:6; rSTs:4 tree)
- Chromobacterium vaccinii (isolates:13; rSTs:11 tree)
- Chromobacterium violaceum (isolates:30; rSTs:20 tree)
- Gulbenkiania (isolates:3; rSTs:2)
- Paludibacterium (isolates:6; rSTs:4 tree)
- Pseudogulbenkiania (isolates:4; rSTs:4 tree)
- Vogesella (isolates:17; rSTs:18 tree)
- Vogesella alkaliphila (isolates:1; rSTs:1)
- Vogesella aquatica (isolates:1; rSTs:1)
- Vogesella fluminis (isolates:1; rSTs:1)
- Vogesella indigofera (isolates:7; rSTs:7 tree)
- Vogesella margarita (isolates:1; rSTs:1)
- Vogesella oryzae (isolates:1; rSTs:1)
- Vogesella sp. (isolates:4; rSTs:5 tree)
- Vogesella urethralis (isolates:1; rSTs:1)
- Leeiaceae (isolates:3; rSTs:3 tree)
- Neisseriaceae (isolates:78973; rSTs:24020)
- Alysiella (isolates:6; rSTs:3 tree)
- Aquella (isolates:1; rSTs:1)
- Aquella oligotrophica (isolates:1; rSTs:1)
- Bergeriella (isolates:2; rSTs:2)
- Bergeriella denitrificans (isolates:2; rSTs:2)
- Conchiformibius (isolates:5; rSTs:3 tree)
- Craterilacuibacter (isolates:2; rSTs:2)
- Crenobacter (isolates:8; rSTs:8 tree)
- Eikenella (isolates:38; rSTs:33 tree)
- Kingella (isolates:174; rSTs:106 tree)
- Neisseria (isolates:78640; rSTs:23792)
- Neisseria animalis (isolates:3; rSTs:1)
- Neisseria animaloris (isolates:4; rSTs:4 tree)
- Neisseria arctica (isolates:2; rSTs:1)
- Neisseria bacilliformis (isolates:6; rSTs:8 tree)
- Neisseria basseii (isolates:2; rSTs:1)
- Neisseria benedictiae (isolates:3; rSTs:2)
- Neisseria bergeri (isolates:63; rSTs:48 tree)
- Neisseria blantyrii (isolates:14; rSTs:7 tree)
- Neisseria brasiliensis (isolates:2; rSTs:2)
- Neisseria canis (isolates:2; rSTs:2)
- Neisseria chenwenguii (isolates:2; rSTs:2)
- Neisseria cinerea (isolates:39; rSTs:104 tree)
- Neisseria dentiae (isolates:4; rSTs:3 tree)
- Neisseria dumasiana (isolates:4; rSTs:2)
- Neisseria elongata (isolates:18; rSTs:24 tree)
- Neisseria gonorrhoeae (isolates:41013; rSTs:6290)
- Neisseria iguanae (isolates:1; rSTs:1)
- Neisseria lactamica (isolates:1266; rSTs:1078 tree)
- Neisseria lisongii (isolates:2; rSTs:2)
- Neisseria maigaei (isolates:1; rSTs:1)
- Neisseria meningitidis (isolates:35818; rSTs:15086)
- Neisseria montereyensis (isolates:1; rSTs:1)
- Neisseria mucosa (isolates:35; rSTs:123 tree)
- Neisseria musculi (isolates:9; rSTs:2)
- Neisseria oralis (isolates:7; rSTs:24 tree)
- Neisseria polysaccharea (isolates:70; rSTs:133 tree)
- Neisseria shayeganii (isolates:2; rSTs:2)
- Neisseria sp. (isolates:104; rSTs:110 tree)
- Neisseria subflava (isolates:90; rSTs:699 tree)
- Neisseria uirgultaei (isolates:9; rSTs:3 tree)
- Neisseria viridiae (isolates:23; rSTs:7 tree)
- Neisseria wadsworthii (isolates:3; rSTs:2)
- Neisseria weaveri (isolates:9; rSTs:8 tree)
- Neisseria weixii (isolates:3; rSTs:2)
- Neisseria yangbaofengii (isolates:2; rSTs:2)
- Neisseria zalophi (isolates:1; rSTs:1)
- Neisseria zoodegmatis (isolates:3; rSTs:4 tree)
- Paralysiella (isolates:1; rSTs:1)
- Paralysiella testudinis (isolates:1; rSTs:1)
- Simonsiella (isolates:3; rSTs:1)
- Simonsiella muelleri (isolates:3; rSTs:1)
- Snodgrassella (isolates:75; rSTs:55 tree)
- Stenoxybacter (isolates:1; rSTs:1)
- Stenoxybacter acetivorans (isolates:1; rSTs:1)
- Uruburuella (isolates:3; rSTs:2)
- Vitreoscilla (isolates:7; rSTs:4 tree)
- Wielerella (isolates:7; rSTs:6 tree)
- Nitrosomonadales (isolates:240; rSTs:195 tree)
- Gallionellaceae (isolates:15; rSTs:14 tree)
- Candidatus Nitrotoga (isolates:7; rSTs:7 tree)
- Ferrigenium (isolates:1; rSTs:1)
- Ferrigenium kumadai (isolates:1; rSTs:1)
- Ferriphaselus (isolates:2; rSTs:2)
- Gallionella (isolates:2; rSTs:2)
- Sideroxyarcus (isolates:1; rSTs:1)
- Sideroxyarcus emersonii (isolates:1; rSTs:1)
- Sideroxydans (isolates:2; rSTs:1)
- Sideroxydans lithotrophicus (isolates:2; rSTs:1)
- Methylophilaceae (isolates:87; rSTs:66 tree)
- Candidatus Methylopumilus (isolates:40; rSTs:23 tree)
- Methylobacillus (isolates:7; rSTs:7 tree)
- Methylobacillus arboreus (isolates:1; rSTs:1)
- Methylobacillus caricis (isolates:1; rSTs:1)
- Methylobacillus flagellatus (isolates:1; rSTs:1)
- Methylobacillus glycogenes (isolates:1; rSTs:1)
- Methylobacillus gramineus (isolates:1; rSTs:1)
- Methylobacillus methanolivorans (isolates:1; rSTs:1)
- Methylobacillus rhizosphaerae (isolates:1; rSTs:1)
- Methylophilus (isolates:22; rSTs:18 tree)
- Methyloradius (isolates:1; rSTs:1)
- Methyloradius palustris (isolates:1; rSTs:1)
- Methylotenera (isolates:10; rSTs:10 tree)
- Methylovorus (isolates:5; rSTs:5 tree)
- Novimethylophilus (isolates:1; rSTs:1)
- Novimethylophilus kurashikiensis (isolates:1; rSTs:1)
- Pseudomethylobacillus (isolates:1; rSTs:1)
- Pseudomethylobacillus aquaticus (isolates:1; rSTs:1)
- Nitrosomonadaceae (isolates:92; rSTs:77 tree)
- Nitrosomonas (isolates:65; rSTs:53 tree)
- Nitrosomonas aestuarii (isolates:2; rSTs:2)
- Nitrosomonas communis (isolates:4; rSTs:4 tree)
- Nitrosomonas cryotolerans (isolates:3; rSTs:1)
- Nitrosomonas europaea (isolates:5; rSTs:3 tree)
- Nitrosomonas eutropha (isolates:7; rSTs:5 tree)
- Nitrosomonas halophila (isolates:1; rSTs:1)
- Nitrosomonas marina (isolates:2; rSTs:2)
- Nitrosomonas mobilis (isolates:1; rSTs:1)
- Nitrosomonas nitrosa (isolates:4; rSTs:4 tree)
- Nitrosomonas oligotropha (isolates:4; rSTs:4 tree)
- Nitrosomonas sp. (isolates:22; rSTs:17 tree)
- Nitrosomonas stercoris (isolates:1; rSTs:1)
- Nitrosomonas supralitoralis (isolates:1; rSTs:1)
- Nitrosomonas ureae (isolates:8; rSTs:7 tree)
- Nitrosospira (isolates:26; rSTs:23 tree)
- Nitrosovibrio (isolates:1; rSTs:1)
- Nitrosovibrio tenuis (isolates:1; rSTs:1)
- Nitrosomonas (isolates:65; rSTs:53 tree)
- Sterolibacteriaceae (isolates:21; rSTs:17 tree)
- Denitratisoma (isolates:3; rSTs:2)
- Georgfuchsia (isolates:1; rSTs:1)
- Georgfuchsia toluolica (isolates:1; rSTs:1)
- Methyloversatilis (isolates:10; rSTs:8 tree)
- Rugosibacter (isolates:1; rSTs:1)
- Rugosibacter aromaticivorans (isolates:1; rSTs:1)
- Sterolibacterium (isolates:1; rSTs:1)
- Sterolibacterium denitrificans (isolates:1; rSTs:1)
- Sulfuricystis (isolates:2; rSTs:2)
- Sulfurisoma (isolates:2; rSTs:1)
- Sulfurisoma sediminicola (isolates:2; rSTs:1)
- Sulfuritalea (isolates:1; rSTs:1)
- Sulfuritalea hydrogenivorans (isolates:1; rSTs:1)
- Sulfuricellaceae (isolates:11; rSTs:9 tree)
- Thiobacillaceae (isolates:12; rSTs:10 tree)
- Usitatibacteraceae (isolates:2; rSTs:2)
- Gallionellaceae (isolates:15; rSTs:14 tree)
- Rhodocyclales (isolates:135; rSTs:119 tree)
- Azonexaceae (isolates:22; rSTs:22 tree)
- Fluviibacteraceae (isolates:3; rSTs:2)
- Rhodocyclaceae (isolates:45; rSTs:37 tree)
- Aromatoleum (isolates:15; rSTs:12 tree)
- Aromatoleum anaerobium (isolates:1; rSTs:1)
- Aromatoleum aromaticum (isolates:3; rSTs:2)
- Aromatoleum bremense (isolates:2; rSTs:1)
- Aromatoleum buckelii (isolates:1; rSTs:1)
- Aromatoleum diolicum (isolates:1; rSTs:1)
- Aromatoleum evansii (isolates:1; rSTs:1)
- Aromatoleum petrolei (isolates:2; rSTs:1)
- Aromatoleum toluclasticum (isolates:2; rSTs:2)
- Aromatoleum tolulyticum (isolates:1; rSTs:1)
- Aromatoleum toluvorans (isolates:1; rSTs:1)
- Azospira (isolates:8; rSTs:7 tree)
- Azovibrio (isolates:1; rSTs:1)
- Azovibrio restrictus (isolates:1; rSTs:1)
- Candidatus Dactylopiibacterium (isolates:4; rSTs:2)
- Candidatus Dactylopiibacterium carminicum (isolates:4; rSTs:2)
- Niveibacterium (isolates:5; rSTs:4 tree)
- Oryzomicrobium (isolates:1; rSTs:1)
- Oryzomicrobium terrae (isolates:1; rSTs:1)
- Propionivibrio (isolates:4; rSTs:4 tree)
- Rhodocyclus (isolates:7; rSTs:6 tree)
- Aromatoleum (isolates:15; rSTs:12 tree)
- Zoogloeaceae (isolates:65; rSTs:58 tree)
- Azoarcus (isolates:7; rSTs:7 tree)
- Cognatazoarcus (isolates:1; rSTs:1)
- Cognatazoarcus halotolerans (isolates:1; rSTs:1)
- Denitromonas (isolates:4; rSTs:3 tree)
- Nitrogeniibacter (isolates:3; rSTs:3 tree)
- Parazoarcus (isolates:3; rSTs:2)
- Parazoarcus communis (isolates:3; rSTs:2)
- Pseudazoarcus (isolates:1; rSTs:1)
- Pseudazoarcus pumilus (isolates:1; rSTs:1)
- Pseudothauera (isolates:4; rSTs:4 tree)
- Thauera (isolates:31; rSTs:26 tree)
- Thauera aminoaromatica (isolates:2; rSTs:2)
- Thauera aromatica (isolates:4; rSTs:4 tree)
- Thauera butanivorans (isolates:1; rSTs:1)
- Thauera chlorobenzoica (isolates:2; rSTs:1)
- Thauera humireducens (isolates:2; rSTs:2)
- Thauera linaloolentis (isolates:3; rSTs:1)
- Thauera mechernichensis (isolates:1; rSTs:1)
- Thauera phenolivorans (isolates:1; rSTs:1)
- Thauera phenylacetica (isolates:1; rSTs:1)
- Thauera propionica (isolates:1; rSTs:1)
- Thauera sedimentorum (isolates:2; rSTs:1)
- Thauera sp. (isolates:10; rSTs:9 tree)
- Thauera terpenica (isolates:1; rSTs:1)
- Uliginosibacterium (isolates:5; rSTs:5 tree)
- Zoogloea (isolates:6; rSTs:6 tree)
- Burkholderiales (isolates:10994; rSTs:5419)
- Gammaproteobacteria (isolates:288731; rSTs:79617)
- Acidiferrobacterales (isolates:5; rSTs:5 tree)
- Aeromonadales (isolates:1935; rSTs:1259 tree)
- Aeromonadaceae (isolates:1914; rSTs:1241 tree)
- Aeromonas (isolates:1883; rSTs:1214 tree)
- Aeromonas allosaccharophila (isolates:23; rSTs:21 tree)
- Aeromonas aquatica (isolates:1; rSTs:1)
- Aeromonas australiensis (isolates:2; rSTs:2)
- Aeromonas bestiarum (isolates:8; rSTs:8 tree)
- Aeromonas bivalvium (isolates:5; rSTs:2)
- Aeromonas cavernicola (isolates:1; rSTs:1)
- Aeromonas caviae (isolates:422; rSTs:312 tree)
- Aeromonas dhakensis (isolates:96; rSTs:71 tree)
- Aeromonas diversa (isolates:2; rSTs:1)
- Aeromonas encheleia (isolates:4; rSTs:3 tree)
- Aeromonas enteropelogenes (isolates:12; rSTs:10 tree)
- Aeromonas eucrenophila (isolates:1; rSTs:1)
- Aeromonas finlandensis (isolates:1; rSTs:1)
- Aeromonas fluvialis (isolates:1; rSTs:1)
- Aeromonas genomosp. paramedia (isolates:1; rSTs:1)
- Aeromonas hydrophila (isolates:290; rSTs:144 tree)
- Aeromonas jandaei (isolates:34; rSTs:28 tree)
- Aeromonas lacus (isolates:1; rSTs:1)
- Aeromonas lusitana (isolates:1; rSTs:1)
- Aeromonas media (isolates:21; rSTs:19 tree)
- Aeromonas molluscorum (isolates:1; rSTs:1)
- Aeromonas piscicola (isolates:4; rSTs:4 tree)
- Aeromonas popoffii (isolates:2; rSTs:2)
- Aeromonas rivipollensis (isolates:13; rSTs:10 tree)
- Aeromonas rivuli (isolates:2; rSTs:2)
- Aeromonas salmonicida (isolates:298; rSTs:67 tree)
- Aeromonas sanarellii (isolates:4; rSTs:4 tree)
- Aeromonas schubertii (isolates:6; rSTs:5 tree)
- Aeromonas simiae (isolates:5; rSTs:4 tree)
- Aeromonas sobria (isolates:12; rSTs:10 tree)
- Aeromonas sp. (isolates:264; rSTs:212 tree)
- Aeromonas taiwanensis (isolates:6; rSTs:3 tree)
- Aeromonas tecta (isolates:1; rSTs:1)
- Aeromonas veronii (isolates:338; rSTs:260 tree)
- Dongshaea (isolates:1; rSTs:1)
- Dongshaea marina (isolates:1; rSTs:1)
- Oceanimonas (isolates:11; rSTs:9 tree)
- Oceanisphaera (isolates:9; rSTs:8 tree)
- Oceanisphaera arctica (isolates:2; rSTs:1)
- Oceanisphaera avium (isolates:1; rSTs:1)
- Oceanisphaera litoralis (isolates:1; rSTs:1)
- Oceanisphaera marina (isolates:1; rSTs:1)
- Oceanisphaera pacifica (isolates:1; rSTs:1)
- Oceanisphaera profunda (isolates:1; rSTs:1)
- Oceanisphaera psychrotolerans (isolates:1; rSTs:1)
- Oceanisphaera sp. (isolates:1; rSTs:1)
- Tolumonas (isolates:4; rSTs:3 tree)
- Zobellella (isolates:6; rSTs:6 tree)
- Aeromonas (isolates:1883; rSTs:1214 tree)
- Succinivibrionaceae (isolates:21; rSTs:18 tree)
- Aeromonadaceae (isolates:1914; rSTs:1241 tree)
- Alteromonadales (isolates:1719; rSTs:1350)
- Alteromonadaceae (isolates:245; rSTs:210 tree)
- Aestuariibacter (isolates:2; rSTs:2)
- Agaribacter (isolates:1; rSTs:1)
- Agaribacter marinus (isolates:1; rSTs:1)
- Agarivorans (isolates:15; rSTs:12 tree)
- Algibacillus (isolates:1; rSTs:1)
- Algibacillus agarilyticus (isolates:1; rSTs:1)
- Alginatibacterium (isolates:1; rSTs:1)
- Alginatibacterium sediminis (isolates:1; rSTs:1)
- Aliagarivorans (isolates:2; rSTs:2)
- Aliiglaciecola (isolates:5; rSTs:5 tree)
- Alishewanella (isolates:10; rSTs:10 tree)
- Alishewanella aestuarii (isolates:1; rSTs:1)
- Alishewanella agri (isolates:1; rSTs:1)
- Alishewanella jeotgali (isolates:1; rSTs:1)
- Alishewanella longhuensis (isolates:1; rSTs:1)
- Alishewanella maricola (isolates:1; rSTs:1)
- Alishewanella sp. (isolates:4; rSTs:4 tree)
- Alishewanella tabrizica (isolates:1; rSTs:1)
- Alkalimarinus (isolates:6; rSTs:3 tree)
- Alteromonas (isolates:144; rSTs:118 tree)
- Alteromonas abrolhosensis (isolates:2; rSTs:1)
- Alteromonas aestuariivivens (isolates:1; rSTs:1)
- Alteromonas alba (isolates:1; rSTs:1)
- Alteromonas antoniana (isolates:1; rSTs:1)
- Alteromonas aquimaris (isolates:1; rSTs:1)
- Alteromonas australica (isolates:2; rSTs:2)
- Alteromonas confluentis (isolates:1; rSTs:1)
- Alteromonas facilis (isolates:1; rSTs:1)
- Alteromonas flava (isolates:1; rSTs:1)
- Alteromonas genovensis (isolates:2; rSTs:2)
- Alteromonas gilva (isolates:1; rSTs:1)
- Alteromonas gracilis (isolates:2; rSTs:2)
- Alteromonas halophila (isolates:1; rSTs:1)
- Alteromonas hispanica (isolates:1; rSTs:1)
- Alteromonas lipolytica (isolates:2; rSTs:1)
- Alteromonas lipotrueae (isolates:2; rSTs:2)
- Alteromonas lipotrueiana (isolates:1; rSTs:1)
- Alteromonas macleodii (isolates:24; rSTs:16 tree)
- Alteromonas marina (isolates:1; rSTs:1)
- Alteromonas mediterranea (isolates:18; rSTs:12 tree)
- Alteromonas naphthalenivorans (isolates:1; rSTs:1)
- Alteromonas oceani (isolates:1; rSTs:1)
- Alteromonas oceanisediminis (isolates:1; rSTs:1)
- Alteromonas pelagimontana (isolates:1; rSTs:1)
- Alteromonas ponticola (isolates:1; rSTs:1)
- Alteromonas portus (isolates:1; rSTs:1)
- Alteromonas profundi (isolates:1; rSTs:1)
- Alteromonas salexigens (isolates:1; rSTs:1)
- Alteromonas sediminis (isolates:1; rSTs:1)
- Alteromonas sp. (isolates:56; rSTs:48 tree)
- Alteromonas stellipolaris (isolates:13; rSTs:11 tree)
- Bowmanella (isolates:5; rSTs:5 tree)
- Catenovulum (isolates:5; rSTs:5 tree)
- Gayadomonas (isolates:1; rSTs:1)
- Gayadomonas joobiniege (isolates:1; rSTs:1)
- Glaciecola (isolates:6; rSTs:7 tree)
- Halioxenophilus (isolates:1; rSTs:1)
- Halioxenophilus sp. (isolates:1; rSTs:1)
- Hydrocarboniclastica (isolates:1; rSTs:1)
- Hydrocarboniclastica marina (isolates:1; rSTs:1)
- Lacimicrobium (isolates:4; rSTs:3 tree)
- Marinifaba (isolates:1; rSTs:1)
- Marinifaba aquimaris (isolates:1; rSTs:1)
- Marisediminitalea (isolates:2; rSTs:1)
- Marisediminitalea aggregata (isolates:2; rSTs:1)
- Neptunicella (isolates:1; rSTs:1)
- Neptunicella marina (isolates:1; rSTs:1)
- Ningiella (isolates:1; rSTs:1)
- Ningiella ruwaisensis (isolates:1; rSTs:1)
- Opacimonas (isolates:1; rSTs:1)
- Opacimonas viscosa (isolates:1; rSTs:1)
- Paraglaciecola (isolates:19; rSTs:17 tree)
- Paraglaciecola agarilytica (isolates:2; rSTs:1)
- Paraglaciecola arctica (isolates:2; rSTs:2)
- Paraglaciecola chathamensis (isolates:3; rSTs:3 tree)
- Paraglaciecola hydrolytica (isolates:1; rSTs:1)
- Paraglaciecola marina (isolates:1; rSTs:1)
- Paraglaciecola mesophila (isolates:1; rSTs:1)
- Paraglaciecola polaris (isolates:1; rSTs:1)
- Paraglaciecola psychrophila (isolates:2; rSTs:1)
- Paraglaciecola sp. (isolates:6; rSTs:6 tree)
- Paraneptunicella (isolates:1; rSTs:1)
- Paraneptunicella aestuarii (isolates:1; rSTs:1)
- Planctobacterium (isolates:1; rSTs:1)
- Planctobacterium marinum (isolates:1; rSTs:1)
- Saccharobesus (isolates:1; rSTs:1)
- Saccharobesus litoralis (isolates:1; rSTs:1)
- Salinimonas (isolates:6; rSTs:6 tree)
- Saliniradius (isolates:1; rSTs:1)
- Saliniradius amylolyticus (isolates:1; rSTs:1)
- Colwelliaceae (isolates:96; rSTs:77 tree)
- Cognaticolwellia (isolates:5; rSTs:4 tree)
- Colwellia (isolates:55; rSTs:38 tree)
- Candidatus Colwellia aromaticivorans (isolates:1; rSTs:1)
- Colwellia chukchiensis (isolates:2; rSTs:1)
- Colwellia demingiae (isolates:1; rSTs:1)
- Colwellia echini (isolates:1; rSTs:1)
- Colwellia hornerae (isolates:3; rSTs:1)
- Colwellia marinimaniae (isolates:1; rSTs:1)
- Colwellia maritima (isolates:1)
- Colwellia piezophila (isolates:1; rSTs:1)
- Colwellia polaris (isolates:1; rSTs:1)
- Colwellia ponticola (isolates:1; rSTs:1)
- Colwellia psychrerythraea (isolates:1; rSTs:1)
- Colwellia sp. (isolates:41; rSTs:28 tree)
- Litorilituus (isolates:2; rSTs:2)
- Pseudocolwellia (isolates:2; rSTs:2)
- Thalassomonas (isolates:4; rSTs:5 tree)
- Thalassotalea (isolates:28; rSTs:26 tree)
- Thalassotalea agarivorans (isolates:2; rSTs:1)
- Thalassotalea algicola (isolates:1; rSTs:1)
- Thalassotalea atypica (isolates:1; rSTs:1)
- Thalassotalea crassostreae (isolates:2; rSTs:1)
- Thalassotalea euphylliae (isolates:3; rSTs:3 tree)
- Thalassotalea eurytherma (isolates:1; rSTs:1)
- Thalassotalea hakodatensis (isolates:1; rSTs:1)
- Thalassotalea insulae (isolates:1; rSTs:1)
- Thalassotalea litorea (isolates:1; rSTs:1)
- Thalassotalea loyana (isolates:1; rSTs:1)
- Thalassotalea mangrovi (isolates:1; rSTs:1)
- Thalassotalea marina (isolates:1; rSTs:1)
- Thalassotalea piscium (isolates:2; rSTs:1)
- Thalassotalea ponticola (isolates:1; rSTs:1)
- Thalassotalea profundi (isolates:1; rSTs:1)
- Thalassotalea sediminis (isolates:1; rSTs:1)
- Thalassotalea sp. (isolates:7; rSTs:8 tree)
- Echinimonadaceae (isolates:5; rSTs:4 tree)
- Ferrimonadaceae (isolates:26; rSTs:22 tree)
- Ferrimonas (isolates:21; rSTs:19 tree)
- Ferrimonas aestuarii (isolates:1; rSTs:1)
- Ferrimonas balearica (isolates:10; rSTs:9 tree)
- Ferrimonas futtsuensis (isolates:1; rSTs:1)
- Ferrimonas kyonanensis (isolates:1; rSTs:1)
- Ferrimonas lipolytica (isolates:1; rSTs:1)
- Ferrimonas marina (isolates:2; rSTs:1)
- Ferrimonas sediminicola (isolates:1; rSTs:1)
- Ferrimonas sediminum (isolates:1; rSTs:1)
- Ferrimonas senticii (isolates:1; rSTs:1)
- Ferrimonas sp. (isolates:2; rSTs:2)
- Paraferrimonas (isolates:5; rSTs:3 tree)
- Ferrimonas (isolates:21; rSTs:19 tree)
- Idiomarinaceae (isolates:89; rSTs:74 tree)
- Aliidiomarina (isolates:14; rSTs:13 tree)
- Aliidiomarina celeris (isolates:1; rSTs:1)
- Aliidiomarina halalkaliphila (isolates:1; rSTs:1)
- Aliidiomarina haloalkalitolerans (isolates:1; rSTs:1)
- Aliidiomarina indica (isolates:1; rSTs:1)
- Aliidiomarina iranensis (isolates:1; rSTs:1)
- Aliidiomarina maris (isolates:2; rSTs:1)
- Aliidiomarina minuta (isolates:1; rSTs:1)
- Aliidiomarina quisquiliarum (isolates:1; rSTs:1)
- Aliidiomarina sanyensis (isolates:1; rSTs:1)
- Aliidiomarina sedimenti (isolates:1; rSTs:1)
- Aliidiomarina shirensis (isolates:1; rSTs:1)
- Aliidiomarina soli (isolates:1; rSTs:1)
- Aliidiomarina taiwanensis (isolates:1; rSTs:1)
- Idiomarina (isolates:39; rSTs:31 tree)
- Idiomarina abyssalis (isolates:8; rSTs:5 tree)
- Idiomarina aquatica (isolates:1; rSTs:1)
- Idiomarina baltica (isolates:1)
- Idiomarina fontislapidosi (isolates:2; rSTs:1)
- Idiomarina loihiensis (isolates:6; rSTs:3 tree)
- Idiomarina piscisalsi (isolates:1; rSTs:1)
- Idiomarina ramblicola (isolates:1; rSTs:1)
- Idiomarina rhizosphaerae (isolates:1; rSTs:1)
- Idiomarina seosinensis (isolates:1; rSTs:1)
- Idiomarina sp. (isolates:13; rSTs:14 tree)
- Idiomarina tyrosinivorans (isolates:1; rSTs:1)
- Idiomarina xiamenensis (isolates:1; rSTs:1)
- Idiomarina zobellii (isolates:2; rSTs:1)
- Pseudidiomarina (isolates:36; rSTs:30 tree)
- Pseudidiomarina aestuarii (isolates:1; rSTs:1)
- Pseudidiomarina andamanensis (isolates:2; rSTs:1)
- Pseudidiomarina aquimaris (isolates:1; rSTs:1)
- Pseudidiomarina atlantica (isolates:1; rSTs:1)
- Pseudidiomarina donghaiensis (isolates:2; rSTs:1)
- Pseudidiomarina fusca (isolates:1)
- Pseudidiomarina gelatinasegens (isolates:1; rSTs:1)
- Pseudidiomarina halophila (isolates:1; rSTs:1)
- Pseudidiomarina homiensis (isolates:2; rSTs:2)
- Pseudidiomarina indica (isolates:1; rSTs:1)
- Pseudidiomarina insulisalsae (isolates:1; rSTs:1)
- Pseudidiomarina mangrovi (isolates:1; rSTs:1)
- Pseudidiomarina marina (isolates:1; rSTs:1)
- Pseudidiomarina maritima (isolates:1; rSTs:1)
- Pseudidiomarina piscicola (isolates:1; rSTs:1)
- Pseudidiomarina planktonica (isolates:2; rSTs:1)
- Pseudidiomarina salinarum (isolates:2; rSTs:1)
- Pseudidiomarina sediminum (isolates:3; rSTs:2)
- Pseudidiomarina sp. (isolates:1; rSTs:8 tree)
- Pseudidiomarina tainanensis (isolates:1; rSTs:1)
- Pseudidiomarina taiwanensis (isolates:1; rSTs:1)
- Pseudidiomarina terrestris (isolates:6)
- Pseudidiomarina woesei (isolates:2; rSTs:1)
- Aliidiomarina (isolates:14; rSTs:13 tree)
- Moritellaceae (isolates:27; rSTs:18 tree)
- Pseudoalteromonadaceae (isolates:586; rSTs:444 tree)
- Algicola (isolates:1; rSTs:1)
- Algicola sagamiensis (isolates:1; rSTs:1)
- Flocculibacter (isolates:1; rSTs:1)
- Flocculibacter collagenilyticus (isolates:1; rSTs:1)
- Pseudoalteromonas (isolates:576; rSTs:436 tree)
- Pseudoalteromonas agarivorans (isolates:2; rSTs:2)
- Pseudoalteromonas aliena (isolates:3; rSTs:3 tree)
- Pseudoalteromonas amylolytica (isolates:1; rSTs:1)
- Pseudoalteromonas arabiensis (isolates:1; rSTs:2)
- Pseudoalteromonas arctica (isolates:7; rSTs:6 tree)
- Pseudoalteromonas atlantica (isolates:1; rSTs:1)
- Pseudoalteromonas aurantia (isolates:1; rSTs:1)
- Pseudoalteromonas byunsanensis (isolates:1; rSTs:1)
- Pseudoalteromonas caenipelagi (isolates:1; rSTs:1)
- Pseudoalteromonas carrageenovora (isolates:12; rSTs:8 tree)
- Pseudoalteromonas citrea (isolates:3; rSTs:2)
- Pseudoalteromonas denitrificans (isolates:1; rSTs:1)
- Pseudoalteromonas distincta (isolates:6; rSTs:5 tree)
- Pseudoalteromonas donghaensis (isolates:1; rSTs:1)
- Pseudoalteromonas espejiana (isolates:2; rSTs:1)
- Pseudoalteromonas flavipulchra (isolates:5; rSTs:3 tree)
- Pseudoalteromonas fuliginea (isolates:5; rSTs:3 tree)
- Pseudoalteromonas galatheae (isolates:1; rSTs:1)
- Pseudoalteromonas gelatinilytica (isolates:1; rSTs:1)
- Pseudoalteromonas issachenkonii (isolates:2; rSTs:1)
- Pseudoalteromonas lipolytica (isolates:4; rSTs:3 tree)
- Pseudoalteromonas luteoviolacea (isolates:25; rSTs:18 tree)
- Pseudoalteromonas maricaloris (isolates:2; rSTs:1)
- Pseudoalteromonas marina (isolates:5; rSTs:5 tree)
- Pseudoalteromonas mariniglutinosa (isolates:2; rSTs:1)
- Pseudoalteromonas neustonica (isolates:1; rSTs:1)
- Pseudoalteromonas nigrifaciens (isolates:5; rSTs:3 tree)
- Pseudoalteromonas ostreae (isolates:3; rSTs:1)
- Pseudoalteromonas peptidolytica (isolates:4; rSTs:2)
- Pseudoalteromonas phenolica (isolates:8; rSTs:6 tree)
- Pseudoalteromonas piratica (isolates:1; rSTs:1)
- Pseudoalteromonas piscicida (isolates:16; rSTs:6 tree)
- Pseudoalteromonas profundi (isolates:2; rSTs:2)
- Pseudoalteromonas prydzensis (isolates:3; rSTs:2)
- Pseudoalteromonas rhizosphaerae (isolates:3; rSTs:3 tree)
- Pseudoalteromonas rubra (isolates:13; rSTs:9 tree)
- Pseudoalteromonas ruthenica (isolates:14; rSTs:7 tree)
- Pseudoalteromonas shioyasakiensis (isolates:14; rSTs:10 tree)
- Pseudoalteromonas sp. (isolates:372; rSTs:292 tree)
- Pseudoalteromonas spiralis (isolates:1; rSTs:1)
- Pseudoalteromonas spongiae (isolates:4; rSTs:4 tree)
- Pseudoalteromonas telluritireducens (isolates:1; rSTs:1)
- Pseudoalteromonas tetraodonis (isolates:5; rSTs:3 tree)
- Pseudoalteromonas translucida (isolates:1; rSTs:1)
- Pseudoalteromonas tunicata (isolates:4; rSTs:2)
- Pseudoalteromonas ulvae (isolates:2; rSTs:2)
- Pseudoalteromonas undina (isolates:3; rSTs:3 tree)
- Pseudoalteromonas xiamenensis (isolates:1; rSTs:1)
- Psychrosphaera (isolates:8; rSTs:6 tree)
- Algicola (isolates:1; rSTs:1)
- Psychromonadaceae (isolates:24; rSTs:20 tree)
- Corallincola (isolates:3; rSTs:3 tree)
- Psychromonas (isolates:21; rSTs:17 tree)
- Psychromonas antarctica (isolates:1; rSTs:1)
- Psychromonas aquimarina (isolates:1; rSTs:1)
- Psychromonas arctica (isolates:2; rSTs:2)
- Psychromonas hadalis (isolates:1; rSTs:1)
- Psychromonas ingrahamii (isolates:1; rSTs:1)
- Psychromonas marina (isolates:1; rSTs:1)
- Psychromonas ossibalaenae (isolates:1; rSTs:1)
- Psychromonas sp. (isolates:13; rSTs:9 tree)
- Shewanellaceae (isolates:616; rSTs:476 tree)
- Parashewanella (isolates:6; rSTs:4 tree)
- Shewanella (isolates:610; rSTs:472 tree)
- Shewanella abyssi (isolates:1; rSTs:1)
- Shewanella acanthi (isolates:1; rSTs:1)
- Shewanella aegiceratis (isolates:1; rSTs:1)
- Shewanella aestuarii (isolates:3; rSTs:2)
- Shewanella algae (isolates:149; rSTs:116 tree)
- Shewanella algicola (isolates:3; rSTs:2)
- Shewanella algidipiscicola (isolates:3; rSTs:3 tree)
- Shewanella alkalitolerans (isolates:1; rSTs:1)
- Shewanella amazonensis (isolates:2; rSTs:1)
- Shewanella aquimarina (isolates:1; rSTs:1)
- Shewanella atlantica (isolates:1; rSTs:1)
- Shewanella avicenniae (isolates:1; rSTs:1)
- Shewanella baltica (isolates:51; rSTs:30 tree)
- Shewanella basaltis (isolates:1; rSTs:1)
- Shewanella benthica (isolates:3; rSTs:1)
- Shewanella bicestrii (isolates:1; rSTs:1)
- Shewanella canadensis (isolates:1; rSTs:1)
- Shewanella carassii (isolates:3; rSTs:2)
- Shewanella chilikensis (isolates:13; rSTs:9 tree)
- Shewanella colwelliana (isolates:5; rSTs:5 tree)
- Shewanella corallii (isolates:1; rSTs:1)
- Shewanella cyperi (isolates:2; rSTs:2)
- Shewanella decolorationis (isolates:4; rSTs:4 tree)
- Shewanella denitrificans (isolates:1; rSTs:1)
- Shewanella dokdonensis (isolates:2; rSTs:2)
- Shewanella donghaensis (isolates:1; rSTs:1)
- Shewanella electrica (isolates:1; rSTs:1)
- Shewanella electrodiphila (isolates:1; rSTs:1)
- Shewanella eurypsychrophilus (isolates:1; rSTs:1)
- Shewanella fidelis (isolates:6; rSTs:2)
- Shewanella fodinae (isolates:3; rSTs:2)
- Shewanella frigidimarina (isolates:4; rSTs:4 tree)
- Shewanella gaetbuli (isolates:1; rSTs:1)
- Shewanella gelidii (isolates:2; rSTs:2)
- Shewanella gelidimarina (isolates:1; rSTs:1)
- Shewanella glacialimarina (isolates:1; rSTs:1)
- Shewanella glacialipiscicola (isolates:5; rSTs:2)
- Shewanella goraebulensis (isolates:1)
- Shewanella hafniensis (isolates:2; rSTs:1)
- Shewanella halifaxensis (isolates:1; rSTs:1)
- Shewanella halotolerans (isolates:1; rSTs:1)
- Shewanella hanedai (isolates:2; rSTs:1)
- Shewanella holmiensis (isolates:1; rSTs:1)
- Shewanella indica (isolates:14; rSTs:12 tree)
- Shewanella insulae (isolates:5; rSTs:5 tree)
- Shewanella intestini (isolates:1; rSTs:1)
- Shewanella inventionis (isolates:3; rSTs:3 tree)
- Shewanella japonica (isolates:3; rSTs:3 tree)
- Shewanella jiangmenensis (isolates:1; rSTs:1)
- Shewanella kaireitica (isolates:1; rSTs:1)
- Shewanella khirikhana (isolates:1; rSTs:1)
- Shewanella litoralis (isolates:2; rSTs:1)
- Shewanella litorisediminis (isolates:2; rSTs:1)
- Shewanella livingstonensis (isolates:1; rSTs:1)
- Shewanella loihica (isolates:1; rSTs:1)
- Shewanella mangrovi (isolates:1; rSTs:1)
- Shewanella mangrovisoli (isolates:1; rSTs:1)
- Shewanella marina (isolates:1; rSTs:1)
- Shewanella marinintestina (isolates:1; rSTs:1)
- Shewanella marisflavi (isolates:3; rSTs:3 tree)
- Shewanella maritima (isolates:1; rSTs:1)
- Shewanella mesophila (isolates:1; rSTs:1)
- Shewanella metallivivens (isolates:2; rSTs:2)
- Shewanella morhuae (isolates:4; rSTs:3 tree)
- Shewanella nanhaiensis (isolates:1; rSTs:1)
- Shewanella olleyana (isolates:1; rSTs:1)
- Shewanella oncorhynchi (isolates:3; rSTs:3)
- Shewanella oneidensis (isolates:4; rSTs:1)
- Shewanella pealeana (isolates:1; rSTs:1)
- Shewanella piezotolerans (isolates:1; rSTs:1)
- Shewanella pneumatophori (isolates:1; rSTs:1)
- Shewanella polaris (isolates:1; rSTs:1)
- Shewanella profunda (isolates:1; rSTs:1)
- Shewanella psychromarinicola (isolates:3; rSTs:1)
- Shewanella psychrophila (isolates:1; rSTs:1)
- Shewanella psychropiezotolerans (isolates:1; rSTs:1)
- Shewanella psychrotolerans (isolates:1; rSTs:1)
- Shewanella putrefaciens (isolates:14; rSTs:11 tree)
- Shewanella rhizosphaerae (isolates:1; rSTs:1)
- Shewanella sairae (isolates:2; rSTs:1)
- Shewanella salipaludis (isolates:1; rSTs:1)
- Shewanella saliphila (isolates:2; rSTs:1)
- Shewanella schlegeliana (isolates:3; rSTs:1)
- Shewanella sedimentimangrovi (isolates:1; rSTs:1)
- Shewanella sediminis (isolates:1; rSTs:1)
- Shewanella seohaensis (isolates:2; rSTs:2)
- Shewanella septentrionalis (isolates:1; rSTs:1)
- Shewanella sp. (isolates:158; rSTs:129 tree)
- Shewanella spartinae (isolates:1; rSTs:1)
- Shewanella subflava (isolates:1; rSTs:1)
- Shewanella submarina (isolates:1; rSTs:1)
- Shewanella surugensis (isolates:1; rSTs:1)
- Shewanella ulleungensis (isolates:2; rSTs:2)
- Shewanella vesiculosa (isolates:2; rSTs:1)
- Shewanella violacea (isolates:1; rSTs:1)
- Shewanella waksmanii (isolates:1; rSTs:1)
- Shewanella woodyi (isolates:2; rSTs:2)
- Shewanella xiamenensis (isolates:49; rSTs:33 tree)
- Shewanella yunxiaonensis (isolates:1; rSTs:1)
- Shewanella zhangzhouensis (isolates:1; rSTs:1)
- Shewanella zhuhaiensis (isolates:1; rSTs:1)
- Alteromonadaceae (isolates:245; rSTs:210 tree)
- Arenicellales (isolates:3; rSTs:2)
- Candidatus Comchoanobacterales (isolates:2)
- Cardiobacteriales (isolates:110; rSTs:89 tree)
- Cardiobacteriaceae (isolates:65; rSTs:54 tree)
- Ignatzschineriaceae (isolates:44; rSTs:34 tree)
- Ostreibacteriaceae (isolates:1; rSTs:1)
- Cellvibrionales (isolates:188; rSTs:167 tree)
- Cellvibrionaceae (isolates:75; rSTs:66 tree)
- Aestuariicella (isolates:2; rSTs:2)
- Agaribacterium (isolates:1; rSTs:1)
- Agaribacterium haliotis (isolates:1; rSTs:1)
- Agarilytica (isolates:1; rSTs:1)
- Agarilytica rhodophyticola (isolates:1; rSTs:1)
- Candidatus Endobugula (isolates:1; rSTs:1)
- Candidatus Endobugula sertula (isolates:1; rSTs:1)
- Cellvibrio (isolates:18; rSTs:15 tree)
- Exilibacterium (isolates:1; rSTs:1)
- Exilibacterium tricleocarpae (isolates:1; rSTs:1)
- Gilvimarinus (isolates:9; rSTs:9 tree)
- Marinagarivorans (isolates:3; rSTs:3 tree)
- Marinibactrum (isolates:2; rSTs:1)
- Marinibactrum halimedae (isolates:2; rSTs:1)
- Marinimicrobium (isolates:5; rSTs:5 tree)
- Pseudomaricurvus (isolates:2; rSTs:2)
- Pseudoteredinibacter (isolates:3; rSTs:1)
- Pseudoteredinibacter isoporae (isolates:3; rSTs:1)
- Saccharophagus (isolates:5; rSTs:4 tree)
- Sessilibacter (isolates:1; rSTs:1)
- Sessilibacter corallicola (isolates:1; rSTs:1)
- Simiduia (isolates:5; rSTs:4 tree)
- Teredinibacter (isolates:15; rSTs:14 tree)
- Umboniibacter (isolates:1; rSTs:1)
- Umboniibacter marinipuniceus (isolates:1; rSTs:1)
- Halieaceae (isolates:29; rSTs:25 tree)
- Aequoribacter (isolates:2; rSTs:1)
- Aequoribacter fuscus (isolates:2; rSTs:1)
- Candidatus Paraluminiphilus (isolates:1; rSTs:1)
- Candidatus Paraluminiphilus aquimaris (isolates:1; rSTs:1)
- Chromatocurvus (isolates:2; rSTs:1)
- Chromatocurvus halotolerans (isolates:2; rSTs:1)
- Congregibacter (isolates:1; rSTs:1)
- Congregibacter litoralis (isolates:1; rSTs:1)
- Haliea (isolates:2; rSTs:2)
- Halioglobus (isolates:7; rSTs:5 tree)
- Kineobactrum (isolates:2; rSTs:2)
- Luminiphilus (isolates:1; rSTs:1)
- Luminiphilus syltensis (isolates:1; rSTs:1)
- Parahaliea (isolates:4; rSTs:4 tree)
- Pseudohaliea (isolates:1; rSTs:1)
- Pseudohaliea rubra (isolates:1; rSTs:1)
- Pseudohalioglobus (isolates:2; rSTs:2)
- Sediminihaliea (isolates:1; rSTs:1)
- Sediminihaliea albiluteola (isolates:1; rSTs:1)
- Seongchinamella (isolates:3; rSTs:3 tree)
- Aequoribacter (isolates:2; rSTs:1)
- Microbulbiferaceae (isolates:64; rSTs:59 tree)
- Microbulbifer (isolates:64; rSTs:59 tree)
- Microbulbifer agarilyticus (isolates:6; rSTs:6 tree)
- Microbulbifer aggregans (isolates:1; rSTs:1)
- Microbulbifer bruguierae (isolates:1)
- Microbulbifer celer (isolates:2; rSTs:1)
- Microbulbifer donghaiensis (isolates:1; rSTs:1)
- Microbulbifer elongatus (isolates:1; rSTs:1)
- Microbulbifer flavimaris (isolates:1; rSTs:1)
- Microbulbifer guangxiensis (isolates:1; rSTs:1)
- Microbulbifer hainanensis (isolates:1; rSTs:1)
- Microbulbifer halophilus (isolates:1; rSTs:1)
- Microbulbifer harenosus (isolates:1; rSTs:1)
- Microbulbifer hydrolyticus (isolates:2; rSTs:1)
- Microbulbifer mangrovi (isolates:1; rSTs:1)
- Microbulbifer marinus (isolates:1; rSTs:1)
- Microbulbifer okhotskensis (isolates:1; rSTs:1)
- Microbulbifer pacificus (isolates:1; rSTs:1)
- Microbulbifer rhizosphaerae (isolates:1; rSTs:1)
- Microbulbifer salipaludis (isolates:1; rSTs:1)
- Microbulbifer sediminum (isolates:1; rSTs:1)
- Microbulbifer sp. (isolates:21; rSTs:20 tree)
- Microbulbifer taiwanensis (isolates:1; rSTs:1)
- Microbulbifer thermotolerans (isolates:11; rSTs:10 tree)
- Microbulbifer variabilis (isolates:3; rSTs:3 tree)
- Microbulbifer yueqingensis (isolates:1; rSTs:1)
- Microbulbifer zhoushanensis (isolates:1; rSTs:1)
- Microbulbifer (isolates:64; rSTs:59 tree)
- Porticoccaceae (isolates:1; rSTs:1)
- Spongiibacteraceae (isolates:19; rSTs:16 tree)
- Dasania (isolates:3; rSTs:2)
- Marortus (isolates:1; rSTs:1)
- Marortus luteolus (isolates:1; rSTs:1)
- Oceanicoccus (isolates:1; rSTs:1)
- Oceanicoccus sagamiensis (isolates:1; rSTs:1)
- Sinobacterium (isolates:1; rSTs:1)
- Sinobacterium caligoides (isolates:1; rSTs:1)
- Spongiibacter (isolates:8; rSTs:7 tree)
- Zhongshania (isolates:5; rSTs:4 tree)
- Cellvibrionaceae (isolates:75; rSTs:66 tree)
- Chromatiales (isolates:300; rSTs:250 tree)
- Chromatiaceae (isolates:109; rSTs:94 tree)
- Allochromatium (isolates:7; rSTs:6 tree)
- Arsukibacterium (isolates:5; rSTs:5 tree)
- Caldichromatium (isolates:1; rSTs:1)
- Caldichromatium japonicum (isolates:1; rSTs:1)
- Candidatus Nitrosacidococcus (isolates:2; rSTs:2)
- Candidatus Nitrosoglobus (isolates:1; rSTs:1)
- Candidatus Nitrosoglobus terrae (isolates:1; rSTs:1)
- Candidatus Tenderia (isolates:1; rSTs:1)
- Candidatus Tenderia electrophaga (isolates:1; rSTs:1)
- Candidatus Thiosymbion (isolates:4; rSTs:2)
- Candidatus Thiosymbion oneisti (isolates:4; rSTs:2)
- Halochromatium (isolates:3; rSTs:3 tree)
- Imhoffiella (isolates:1; rSTs:1)
- Imhoffiella purpurea (isolates:1; rSTs:1)
- Lamprobacter (isolates:2; rSTs:2)
- Lamprobacter modestohalophilus (isolates:2; rSTs:2)
- Lamprocystis (isolates:1; rSTs:1)
- Lamprocystis purpurea (isolates:1; rSTs:1)
- Marichromatium (isolates:7; rSTs:7 tree)
- Nitrosococcus (isolates:8; rSTs:5 tree)
- Rhabdochromatium (isolates:1; rSTs:1)
- Rhabdochromatium marinum (isolates:1; rSTs:1)
- Rheinheimera (isolates:40; rSTs:33 tree)
- Rheinheimera aquimaris (isolates:3; rSTs:2)
- Rheinheimera baltica (isolates:4; rSTs:3 tree)
- Rheinheimera faecalis (isolates:1; rSTs:1)
- Rheinheimera hassiensis (isolates:1; rSTs:1)
- Rheinheimera lutimaris (isolates:1; rSTs:1)
- Rheinheimera mangrovi (isolates:1; rSTs:1)
- Rheinheimera maricola (isolates:2; rSTs:1)
- Rheinheimera mesophila (isolates:2; rSTs:1)
- Rheinheimera nanhaiensis (isolates:1; rSTs:1)
- Rheinheimera oceanensis (isolates:3; rSTs:1)
- Rheinheimera pacifica (isolates:3; rSTs:3 tree)
- Rheinheimera pleomorphica (isolates:2; rSTs:1)
- Rheinheimera riviphila (isolates:1; rSTs:1)
- Rheinheimera salexigens (isolates:1; rSTs:1)
- Rheinheimera soli (isolates:1; rSTs:1)
- Rheinheimera sp. (isolates:10; rSTs:10 tree)
- Rheinheimera tangshanensis (isolates:2; rSTs:2)
- Rheinheimera texasensis (isolates:1; rSTs:1)
- Thermochromatium (isolates:1; rSTs:1)
- Thermochromatium tepidum (isolates:1; rSTs:1)
- Thiobaca (isolates:1; rSTs:1)
- Thiobaca trueperi (isolates:1; rSTs:1)
- Thiocapsa (isolates:6; rSTs:6 tree)
- Thiococcus (isolates:2; rSTs:2)
- Thiococcus pfennigii (isolates:2; rSTs:2)
- Thiocystis (isolates:3; rSTs:3 tree)
- Thiodictyon (isolates:1; rSTs:1)
- Candidatus Thiodictyon syntrophicum (isolates:1; rSTs:1)
- Thioflavicoccus (isolates:1; rSTs:1)
- Thioflavicoccus mobilis (isolates:1; rSTs:1)
- Thiohalocapsa (isolates:3; rSTs:3 tree)
- Thiorhodococcus (isolates:3; rSTs:3 tree)
- Thiorhodovibrio (isolates:3; rSTs:2)
- Thiospirillum (isolates:1)
- Thiospirillum jenense (isolates:1)
- Ectothiorhodospiraceae (isolates:150; rSTs:122 tree)
- Acidihalobacter (isolates:4; rSTs:4 tree)
- Alkalilimnicola (isolates:3; rSTs:2)
- Alkalispirillum (isolates:1; rSTs:1)
- Alkalispirillum mobile (isolates:1; rSTs:1)
- Aquisalimonas (isolates:2; rSTs:2)
- Arhodomonas (isolates:3; rSTs:3 tree)
- Candidatus Macondimonas (isolates:1; rSTs:1)
- Candidatus Macondimonas diazotrophica (isolates:1; rSTs:1)
- Ectothiorhodosinus (isolates:2; rSTs:1)
- Ectothiorhodosinus mongolicus (isolates:2; rSTs:1)
- Ectothiorhodospira (isolates:19; rSTs:14 tree)
- Ectothiorhodospira haloalkaliphila (isolates:1; rSTs:1)
- Ectothiorhodospira lacustris (isolates:3; rSTs:1)
- Ectothiorhodospira magna (isolates:1; rSTs:1)
- Ectothiorhodospira marina (isolates:1; rSTs:1)
- Ectothiorhodospira mobilis (isolates:3; rSTs:2)
- Ectothiorhodospira shaposhnikovii (isolates:2; rSTs:2)
- Ectothiorhodospira sp. (isolates:4; rSTs:4 tree)
- Ectothiorhodospira variabilis (isolates:4; rSTs:2)
- Halofilum (isolates:1; rSTs:1)
- Halofilum ochraceum (isolates:1; rSTs:1)
- Halorhodospira (isolates:16; rSTs:12 tree)
- Inmirania (isolates:1; rSTs:1)
- Inmirania thermothiophila (isolates:1; rSTs:1)
- Natronocella (isolates:1; rSTs:1)
- Natronocella acetinitrilica (isolates:1; rSTs:1)
- Natronospira (isolates:2; rSTs:2)
- Nitrococcus (isolates:1; rSTs:1)
- Nitrococcus mobilis (isolates:1; rSTs:1)
- Spiribacter (isolates:13; rSTs:11 tree)
- Spiribacter aquaticus (isolates:1; rSTs:1)
- Spiribacter curvatus (isolates:1; rSTs:1)
- Spiribacter halobius (isolates:2; rSTs:1)
- Spiribacter roseus (isolates:2; rSTs:2)
- Spiribacter salilacus (isolates:1; rSTs:1)
- Spiribacter salinus (isolates:2; rSTs:2)
- Spiribacter sp. (isolates:2; rSTs:2)
- Spiribacter vilamensis (isolates:2; rSTs:1)
- Thioalbus (isolates:1; rSTs:1)
- Thioalbus denitrificans (isolates:1; rSTs:1)
- Thioalkalivibrio (isolates:77; rSTs:62 tree)
- Thioalkalivibrio denitrificans (isolates:1; rSTs:1)
- Thioalkalivibrio halophilus (isolates:1; rSTs:1)
- Thioalkalivibrio nitratireducens (isolates:1; rSTs:1)
- Thioalkalivibrio paradoxus (isolates:1; rSTs:1)
- Thioalkalivibrio sp. (isolates:67; rSTs:52 tree)
- Thioalkalivibrio sulfidiphilus (isolates:2; rSTs:2)
- Thioalkalivibrio thiocyanodenitrificans (isolates:1; rSTs:1)
- Thioalkalivibrio thiocyanoxidans (isolates:1; rSTs:1)
- Thioalkalivibrio versutus (isolates:2; rSTs:2)
- Thiogranum (isolates:1; rSTs:1)
- Thiogranum longum (isolates:1; rSTs:1)
- Thiorhodospira (isolates:1; rSTs:1)
- Thiorhodospira sibirica (isolates:1; rSTs:1)
- Granulosicoccaceae (isolates:2; rSTs:2)
- Halothiobacillaceae (isolates:5; rSTs:2)
- Oceanococcaceae (isolates:2; rSTs:2)
- Sedimenticolaceae (isolates:14; rSTs:13 tree)
- Thioalkalibacteraceae (isolates:6; rSTs:5 tree)
- Wenzhouxiangellaceae (isolates:10; rSTs:8 tree)
- Chromatiaceae (isolates:109; rSTs:94 tree)
- Enterobacterales (isolates:183615; rSTs:46366)
- Bruguierivoracaceae (isolates:15; rSTs:14 tree)
- Biostraticola (isolates:1; rSTs:1)
- Biostraticola tofi (isolates:1; rSTs:1)
- Sodalis (isolates:14; rSTs:13 tree)
- Candidatus Sodalis endolongispinus (isolates:1; rSTs:1)
- Candidatus Sodalis pierantonius (isolates:1; rSTs:1)
- Sodalis endosymbiont of Henestaris halophilus (isolates:1; rSTs:1)
- Sodalis glossinidius (isolates:2; rSTs:2)
- Sodalis ligni (isolates:2; rSTs:2)
- Sodalis praecaptivus (isolates:2; rSTs:2)
- Sodalis sp. (isolates:3; rSTs:2)
- Sodalis-like endosymbiont of Proechinophthirus fluctus (isolates:1; rSTs:1)
- Sodalis-like symbiont of Philaenus spumarius (isolates:1; rSTs:1)
- Biostraticola (isolates:1; rSTs:1)
- Budviciaceae (isolates:29; rSTs:18 tree)
- Enterobacteriaceae (isolates:174189; rSTs:41525)
- Atlantibacter (isolates:36; rSTs:25 tree)
- Buttiauxella (isolates:25; rSTs:25 tree)
- Buttiauxella agrestis (isolates:3; rSTs:3 tree)
- Buttiauxella brennerae (isolates:1; rSTs:1)
- Buttiauxella ferragutiae (isolates:3; rSTs:3 tree)
- Buttiauxella gaviniae (isolates:1; rSTs:1)
- Buttiauxella izardii (isolates:1; rSTs:1)
- Buttiauxella massiliensis (isolates:1; rSTs:1)
- Buttiauxella noackiae (isolates:2; rSTs:2)
- Buttiauxella sp. (isolates:12; rSTs:12 tree)
- Buttiauxella warmboldiae (isolates:1; rSTs:1)
- Candidatus Annandia (isolates:2; rSTs:1)
- Candidatus Blochmanniella (isolates:26; rSTs:17)
- Blochmannia endosymbiont of Camponotus (Colobopsis) obliquus (isolates:1; rSTs:1)
- Blochmannia endosymbiont of Camponotus modoc (isolates:3; rSTs:3)
- Blochmannia endosymbiont of Camponotus nipponensis (isolates:1; rSTs:1)
- Blochmannia endosymbiont of Camponotus sp. (isolates:7; rSTs:7)
- Blochmannia endosymbiont of Colobopsis nipponica (isolates:1; rSTs:1)
- Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri (isolates:1; rSTs:1)
- Candidatus Blochmannia ocreatus (isolates:1)
- Candidatus Blochmannia vicinus (isolates:3; rSTs:3)
- Candidatus Blochmanniella camponoti (isolates:3)
- Candidatus Blochmanniella chromaiodes (isolates:1)
- Candidatus Blochmanniella floridana (isolates:1)
- Candidatus Blochmanniella pennsylvanica (isolates:2)
- Candidatus Blochmanniella vafra (isolates:1)
- Candidatus Doolittlea (isolates:1; rSTs:1)
- Candidatus Doolittlea endobia (isolates:1; rSTs:1)
- Candidatus Gillettellia (isolates:1; rSTs:1)
- Candidatus Gillettellia cooleyia (isolates:1; rSTs:1)
- Candidatus Gullanella (isolates:1; rSTs:1)
- Candidatus Gullanella endobia (isolates:1; rSTs:1)
- Candidatus Hamiltonella (isolates:18; rSTs:16 tree)
- Candidatus Hartigia (isolates:1; rSTs:1)
- Candidatus Hartigia pinicola (isolates:1; rSTs:1)
- Candidatus Hoaglandella (isolates:1; rSTs:1)
- Candidatus Hoaglandella endobia (isolates:1; rSTs:1)
- Candidatus Ishikawella (isolates:1)
- Candidatus Ishikawella capsulata (isolates:1)
- Candidatus Mikella (isolates:1; rSTs:1)
- Candidatus Mikella endobia (isolates:1; rSTs:1)
- Candidatus Moranella (isolates:2; rSTs:2)
- Candidatus Moranella endobia (isolates:2; rSTs:2)
- Candidatus Profftia (isolates:2; rSTs:2)
- Candidatus Purcelliella (isolates:5; rSTs:3 tree)
- Candidatus Regiella (isolates:2; rSTs:1)
- Candidatus Regiella insecticola (isolates:2; rSTs:1)
- Candidatus Riesia (isolates:6; rSTs:5 tree)
- Candidatus Schneideria (isolates:3; rSTs:2)
- Candidatus Schneideria nysicola (isolates:3; rSTs:2)
- Candidatus Tachikawaea (isolates:1; rSTs:1)
- Candidatus Tachikawaea gelatinosa (isolates:1; rSTs:1)
- Cedecea (isolates:31; rSTs:20 tree)
- Citrobacter (isolates:3075; rSTs:1132 tree)
- Citrobacter amalonaticus (isolates:106; rSTs:59 tree)
- Citrobacter arsenatis (isolates:2; rSTs:2)
- Citrobacter braakii (isolates:201; rSTs:112 tree)
- Citrobacter cronae (isolates:32; rSTs:21 tree)
- Citrobacter enshiensis (isolates:2)
- Citrobacter europaeus (isolates:11; rSTs:9 tree)
- Citrobacter farmeri (isolates:67; rSTs:30 tree)
- Citrobacter freundii (isolates:1690; rSTs:407 tree)
- Citrobacter gillenii (isolates:3; rSTs:3 tree)
- Citrobacter koseri (isolates:264; rSTs:107 tree)
- Citrobacter meridianamericanus (isolates:1; rSTs:1)
- Citrobacter murliniae (isolates:1; rSTs:1)
- Citrobacter pasteurii (isolates:3; rSTs:2)
- Citrobacter portucalensis (isolates:238; rSTs:112 tree)
- Citrobacter rodentium (isolates:11; rSTs:1)
- Citrobacter sedlakii (isolates:30; rSTs:19 tree)
- Citrobacter sp. (isolates:360; rSTs:205 tree)
- Citrobacter telavivensis (isolates:1; rSTs:1)
- Citrobacter tructae (isolates:1; rSTs:1)
- Citrobacter werkmanii (isolates:27; rSTs:20 tree)
- Citrobacter youngae (isolates:24; rSTs:19 tree)
- Cronobacter (isolates:1490; rSTs:475 tree)
- Cronobacter condimenti (isolates:3; rSTs:1)
- Cronobacter dublinensis (isolates:94; rSTs:86 tree)
- Cronobacter malonaticus (isolates:107; rSTs:63 tree)
- Cronobacter muytjensii (isolates:12; rSTs:13 tree)
- Cronobacter sakazakii (isolates:1218; rSTs:271 tree)
- Cronobacter sp. (isolates:5; rSTs:2)
- Cronobacter turicensis (isolates:45; rSTs:34 tree)
- Cronobacter universalis (isolates:6; rSTs:5 tree)
- Dryocola (isolates:5; rSTs:3 tree)
- Edaphovirga (isolates:1; rSTs:1)
- Edaphovirga cremea (isolates:1; rSTs:1)
- Enterobacter (isolates:8526; rSTs:2562)
- Enterobacter asburiae (isolates:526; rSTs:207 tree)
- Enterobacter bugandensis (isolates:243; rSTs:136 tree)
- Enterobacter cancerogenus (isolates:26; rSTs:18 tree)
- Enterobacter chengduensis (isolates:41; rSTs:15 tree)
- Enterobacter chuandaensis (isolates:9; rSTs:7 tree)
- Enterobacter cloacae (isolates:557; rSTs:233 tree)
- Enterobacter dykesii (isolates:2; rSTs:2)
- Enterobacter genomosp. O (isolates:3; rSTs:3 tree)
- Enterobacter genomosp. S (isolates:1; rSTs:1)
- Enterobacter hormaechei (isolates:5564; rSTs:1185 tree)
- Enterobacter huaxiensis (isolates:7; rSTs:5 tree)
- Enterobacter kobei (isolates:420; rSTs:161 tree)
- Enterobacter ludwigii (isolates:199; rSTs:115 tree)
- Enterobacter mori (isolates:47; rSTs:39 tree)
- Enterobacter nematophilus (isolates:2; rSTs:2)
- Enterobacter oligotrophicus (isolates:3; rSTs:2)
- Enterobacter pasteurii (isolates:5; rSTs:5 tree)
- Enterobacter pseudoroggenkampii (isolates:4; rSTs:4 tree)
- Enterobacter quasihormaechei (isolates:6; rSTs:4)
- Enterobacter quasimori (isolates:2; rSTs:2)
- Enterobacter quasiroggenkampii (isolates:25; rSTs:23 tree)
- Enterobacter roggenkampii (isolates:540; rSTs:233 tree)
- Enterobacter sichuanensis (isolates:20; rSTs:18 tree)
- Enterobacter soli (isolates:10; rSTs:7 tree)
- Enterobacter sp. (isolates:252; rSTs:123 tree)
- Enterobacter vonholyi (isolates:8; rSTs:8 tree)
- Enterobacter wuhouensis (isolates:4; rSTs:4)
- Entomohabitans (isolates:1; rSTs:1)
- Entomohabitans teleogrylli (isolates:1; rSTs:1)
- Escherichia (isolates:42944; rSTs:11690)
- Escherichia albertii (isolates:481; rSTs:261 tree)
- Escherichia coli (isolates:41900; rSTs:11166)
- Escherichia fergusonii (isolates:237; rSTs:126 tree)
- Escherichia marmotae (isolates:111; rSTs:80 tree)
- Escherichia ruysiae (isolates:22; rSTs:8 tree)
- Escherichia sp. (isolates:188; rSTs:45 tree)
- Escherichia whittamii (isolates:5; rSTs:4 tree)
- Franconibacter (isolates:9; rSTs:9 tree)
- Huaxiibacter (isolates:1; rSTs:1)
- Huaxiibacter chinensis (isolates:1; rSTs:1)
- Intestinirhabdus (isolates:1; rSTs:1)
- Intestinirhabdus alba (isolates:1; rSTs:1)
- Jejubacter (isolates:1; rSTs:1)
- Jejubacter calystegiae (isolates:1; rSTs:1)
- Klebsiella (isolates:57963; rSTs:9670)
- Klebsiella aerogenes (isolates:921; rSTs:489 tree)
- Klebsiella africana (isolates:4; rSTs:4 tree)
- Klebsiella electrica (isolates:3; rSTs:6 tree)
- Klebsiella grimontii (isolates:195; rSTs:100 tree)
- Klebsiella huaxiensis (isolates:5; rSTs:4 tree)
- Klebsiella indica (isolates:1; rSTs:1)
- Klebsiella michiganensis (isolates:671; rSTs:241 tree)
- Klebsiella oxytoca (isolates:691; rSTs:243 tree)
- Klebsiella pasteurii (isolates:47; rSTs:31 tree)
- Klebsiella pneumoniae (isolates:51749; rSTs:6421)
- Klebsiella quasipneumoniae (isolates:1819; rSTs:1018 tree)
- Klebsiella quasivariicola (isolates:21; rSTs:8 tree)
- Klebsiella sp. (isolates:358; rSTs:165 tree)
- Klebsiella spallanzanii (isolates:5; rSTs:5 tree)
- Klebsiella variicola (isolates:1473; rSTs:934 tree)
- Kluyvera (isolates:54; rSTs:49 tree)
- Kluyvera ascorbata (isolates:20; rSTs:16 tree)
- Kluyvera cryocrescens (isolates:13; rSTs:13 tree)
- Kluyvera genomosp. 1 (isolates:1; rSTs:1)
- Kluyvera genomosp. 2 (isolates:2; rSTs:1)
- Kluyvera genomosp. 3 (isolates:1; rSTs:1)
- Kluyvera georgiana (isolates:4; rSTs:4 tree)
- Kluyvera intermedia (isolates:6; rSTs:3 tree)
- Kluyvera sichuanensis (isolates:2; rSTs:2)
- Kluyvera sp. (isolates:5; rSTs:8 tree)
- Kosakonia (isolates:70; rSTs:58 tree)
- Kosakonia arachidis (isolates:2; rSTs:1)
- Kosakonia cowanii (isolates:18; rSTs:15 tree)
- Kosakonia oryzae (isolates:3; rSTs:3 tree)
- Kosakonia oryzendophytica (isolates:3; rSTs:2)
- Kosakonia oryziphila (isolates:1; rSTs:1)
- Kosakonia pseudosacchari (isolates:4; rSTs:4 tree)
- Kosakonia quasisacchari (isolates:1; rSTs:1)
- Kosakonia radicincitans (isolates:14; rSTs:10 tree)
- Kosakonia sacchari (isolates:9; rSTs:8 tree)
- Kosakonia sp. (isolates:15; rSTs:13 tree)
- Leclercia (isolates:100; rSTs:61 tree)
- Lelliottia (isolates:55; rSTs:35 tree)
- Mangrovibacter (isolates:4; rSTs:4 tree)
- Phytobacter (isolates:28; rSTs:21 tree)
- Plesiomonas (isolates:43; rSTs:36 tree)
- Pluralibacter (isolates:55; rSTs:28 tree)
- Pseudenterobacter (isolates:3; rSTs:2)
- Pseudenterobacter timonensis (isolates:3; rSTs:2)
- Pseudescherichia (isolates:10; rSTs:7 tree)
- Pseudocitrobacter (isolates:7; rSTs:6 tree)
- Raoultella (isolates:473; rSTs:236 tree)
- Salmonella (isolates:35292; rSTs:14204)
- Scandinavium (isolates:15; rSTs:13 tree)
- Shigella (isolates:23727; rSTs:1035 tree)
- Shimwellia (isolates:5; rSTs:2)
- Siccibacter (isolates:9; rSTs:7 tree)
- Silvania (isolates:2; rSTs:2)
- Superficieibacter (isolates:4; rSTs:3 tree)
- Symbiopectobacterium (isolates:5; rSTs:5 tree)
- Tenebrionibacter (isolates:1; rSTs:1)
- Tenebrionibacter intestinalis (isolates:1; rSTs:1)
- Trabulsiella (isolates:3; rSTs:2)
- Yokenella (isolates:12; rSTs:7 tree)
- Erwiniaceae (isolates:1303; rSTs:736 tree)
- Buchnera (isolates:46; rSTs:39 tree)
- Duffyella (isolates:9; rSTs:8 tree)
- Erwinia (isolates:347; rSTs:122 tree)
- Candidatus Erwinia dacicola (isolates:5; rSTs:1)
- Candidatus Erwinia haradaeae (isolates:6; rSTs:5 tree)
- Erwinia amylovora (isolates:245; rSTs:44 tree)
- Erwinia aphidicola (isolates:11; rSTs:9 tree)
- Erwinia billingiae (isolates:6; rSTs:4 tree)
- Erwinia endophytica (isolates:1; rSTs:1)
- Erwinia mallotivora (isolates:7; rSTs:4 tree)
- Erwinia oleae (isolates:1; rSTs:1)
- Erwinia persicina (isolates:14; rSTs:11 tree)
- Erwinia phyllosphaerae (isolates:1; rSTs:1)
- Erwinia piriflorinigrans (isolates:1; rSTs:1)
- Erwinia psidii (isolates:4; rSTs:4 tree)
- Erwinia pyrifoliae (isolates:9; rSTs:6 tree)
- Erwinia rhapontici (isolates:9; rSTs:7 tree)
- Erwinia sorbitola (isolates:2; rSTs:2)
- Erwinia sp. (isolates:13; rSTs:13 tree)
- Erwinia tasmaniensis (isolates:1; rSTs:1)
- Erwinia tracheiphila (isolates:7; rSTs:4 tree)
- Erwinia typographi (isolates:1; rSTs:1)
- [Pantoea] beijingensis (isolates:3; rSTs:2)
- Izhakiella (isolates:2; rSTs:2)
- Mixta (isolates:14; rSTs:10 tree)
- Mixta calida (isolates:5; rSTs:3 tree)
- Mixta gaviniae (isolates:2; rSTs:1)
- Mixta hanseatica (isolates:1; rSTs:1)
- Mixta intestinalis (isolates:1; rSTs:1)
- Mixta mediterraneensis (isolates:1; rSTs:1)
- Mixta sp. (isolates:1; rSTs:1)
- Mixta tenebrionis (isolates:1; rSTs:1)
- Mixta theicola (isolates:2; rSTs:1)
- Pantoea (isolates:831; rSTs:514 tree)
- Candidatus Pantoea carbekii (isolates:2; rSTs:2)
- Candidatus Pantoea edessiphila (isolates:4; rSTs:4 tree)
- Candidatus Pantoea persica (isolates:1; rSTs:1)
- Pantoea agglomerans (isolates:154; rSTs:124 tree)
- Pantoea alfalfae (isolates:1; rSTs:1)
- Pantoea alhagi (isolates:2; rSTs:2)
- Pantoea allii (isolates:15; rSTs:8 tree)
- Pantoea alvi (isolates:1; rSTs:1)
- Pantoea ananatis (isolates:283; rSTs:116 tree)
- Pantoea anthophila (isolates:14; rSTs:11 tree)
- Pantoea bituminis (isolates:1; rSTs:1)
- Pantoea brenneri (isolates:21; rSTs:5 tree)
- Pantoea coffeiphila (isolates:1; rSTs:1)
- Pantoea communis (isolates:1; rSTs:1)
- Pantoea conspicua (isolates:1; rSTs:1)
- Pantoea cypripedii (isolates:5; rSTs:3)
- Pantoea deleyi (isolates:3; rSTs:1)
- Pantoea deserta (isolates:1; rSTs:1)
- Pantoea dispersa (isolates:50; rSTs:34 tree)
- Pantoea endophytica (isolates:4; rSTs:4 tree)
- Pantoea eucalypti (isolates:6; rSTs:5 tree)
- Pantoea eucrina (isolates:7; rSTs:7 tree)
- Pantoea floridensis (isolates:1; rSTs:1)
- Pantoea formicae (isolates:1; rSTs:1)
- Pantoea gossypiicola (isolates:1; rSTs:1)
- Pantoea latae (isolates:1; rSTs:1)
- Pantoea multigeneris (isolates:1; rSTs:1)
- Pantoea nemavictus (isolates:1; rSTs:1)
- Pantoea phytobeneficialis (isolates:2; rSTs:1)
- Pantoea piersonii (isolates:6; rSTs:3 tree)
- Pantoea rodasii (isolates:2; rSTs:1)
- Pantoea rwandensis (isolates:1; rSTs:1)
- Pantoea septica (isolates:4; rSTs:4 tree)
- Pantoea soli (isolates:1; rSTs:1)
- Pantoea sp. (isolates:176; rSTs:124 tree)
- Pantoea stewartii (isolates:39; rSTs:24 tree)
- Pantoea symbiotica (isolates:1; rSTs:1)
- Pantoea vagans (isolates:12; rSTs:11 tree)
- Pantoea varia (isolates:1; rSTs:1)
- Pantoea wallisii (isolates:1; rSTs:1)
- [Erwinia] mediterraneensis (isolates:1; rSTs:1)
- Phaseolibacter (isolates:1; rSTs:1)
- Phaseolibacter flectens (isolates:1; rSTs:1)
- Rosenbergiella (isolates:27; rSTs:24 tree)
- Rosenbergiella australiborealis (isolates:3; rSTs:3 tree)
- Rosenbergiella collisarenosi (isolates:4; rSTs:4 tree)
- Rosenbergiella epipactidis (isolates:11; rSTs:10 tree)
- Rosenbergiella gaditana (isolates:1; rSTs:1)
- Rosenbergiella metrosideri (isolates:1; rSTs:1)
- Rosenbergiella nectarea (isolates:7; rSTs:5 tree)
- Tatumella (isolates:15; rSTs:9 tree)
- Wigglesworthia (isolates:2; rSTs:1)
- Wigglesworthia glossinidia (isolates:2; rSTs:1)
- Winslowiella (isolates:6; rSTs:4 tree)
- Gallaecimonadaceae (isolates:5; rSTs:5)
- Hafniaceae (isolates:217; rSTs:105 tree)
- Morganellaceae (isolates:2987; rSTs:1587 tree)
- Arsenophonus (isolates:18; rSTs:12 tree)
- Arsenophonus apicola (isolates:1; rSTs:1)
- Arsenophonus endosymbiont of Aleurodicus dispersus (isolates:1; rSTs:1)
- Arsenophonus endosymbiont of Aleurodicus floccissimus (isolates:1)
- Arsenophonus endosymbiont of Aphis craccivora (isolates:1; rSTs:1)
- Arsenophonus endosymbiont of Apis mellifera (isolates:1; rSTs:1)
- Arsenophonus endosymbiont of Bemisia tabaci (isolates:1; rSTs:1)
- Arsenophonus nasoniae (isolates:8; rSTs:3 tree)
- Arsenophonus sp. (isolates:1; rSTs:2)
- Candidatus Arsenophonus lipoptenae (isolates:1; rSTs:1)
- Candidatus Arsenophonus nilaparvatae (isolates:1; rSTs:1)
- Candidatus Arsenophonus triatominarum (isolates:1)
- Moellerella (isolates:20; rSTs:9 tree)
- Morganella (isolates:390; rSTs:201 tree)
- Photorhabdus (isolates:79; rSTs:59 tree)
- Photorhabdus aballayi (isolates:1; rSTs:1)
- Photorhabdus aegyptia (isolates:1; rSTs:1)
- Photorhabdus akhurstii (isolates:2; rSTs:2)
- Photorhabdus antumapuensis (isolates:1; rSTs:1)
- Photorhabdus asymbiotica (isolates:2; rSTs:1)
- Photorhabdus australis (isolates:2; rSTs:2)
- Photorhabdus bodei (isolates:4; rSTs:2)
- Photorhabdus caribbeanensis (isolates:1; rSTs:1)
- Photorhabdus cinerea (isolates:1; rSTs:1)
- Photorhabdus hainanensis (isolates:1; rSTs:1)
- Photorhabdus heterorhabditis (isolates:4; rSTs:4 tree)
- Photorhabdus hindustanensis (isolates:1; rSTs:1)
- Photorhabdus kayaii (isolates:3; rSTs:2)
- Photorhabdus khanii (isolates:3; rSTs:3 tree)
- Photorhabdus kleinii (isolates:1; rSTs:1)
- Photorhabdus laumondii (isolates:22; rSTs:4 tree)
- Photorhabdus luminescens (isolates:6; rSTs:5 tree)
- Photorhabdus namnaonensis (isolates:1; rSTs:1)
- Photorhabdus noenieputensis (isolates:2; rSTs:1)
- Photorhabdus sp. (isolates:12; rSTs:15 tree)
- Photorhabdus stackebrandtii (isolates:1; rSTs:1)
- Photorhabdus tasmaniensis (isolates:1; rSTs:1)
- Photorhabdus temperata (isolates:4; rSTs:5 tree)
- Photorhabdus thracensis (isolates:2; rSTs:2)
- Proteus (isolates:1792; rSTs:837 tree)
- Proteus alimentorum (isolates:3; rSTs:3 tree)
- Proteus appendicitidis (isolates:1)
- Proteus cibi (isolates:3; rSTs:3)
- Proteus columbae (isolates:1; rSTs:1)
- Proteus faecis (isolates:29; rSTs:12 tree)
- Proteus genomosp. 4 (isolates:1; rSTs:1)
- Proteus genomosp. 6 (isolates:1; rSTs:1)
- Proteus hauseri (isolates:3; rSTs:2)
- Proteus mirabilis (isolates:1584; rSTs:636 tree)
- Proteus myxofaciens (isolates:1; rSTs:1)
- Proteus penneri (isolates:20; rSTs:18 tree)
- Proteus sp. (isolates:62; rSTs:85 tree)
- Proteus terrae (isolates:66; rSTs:57 tree)
- Proteus vulgaris (isolates:17; rSTs:17 tree)
- Providencia (isolates:559; rSTs:370 tree)
- Candidatus Providencia siddallii (isolates:1; rSTs:1)
- Providencia alcalifaciens (isolates:45; rSTs:26 tree)
- Providencia burhodogranariea (isolates:1; rSTs:1)
- Providencia hangzhouensis (isolates:1; rSTs:1)
- Providencia heimbachae (isolates:8; rSTs:3 tree)
- Providencia huaxiensis (isolates:27; rSTs:9 tree)
- Providencia manganoxydans (isolates:2; rSTs:2)
- Providencia rettgeri (isolates:76; rSTs:50 tree)
- Providencia rustigianii (isolates:21; rSTs:9 tree)
- Providencia sneebia (isolates:1)
- Providencia sp. (isolates:275; rSTs:218 tree)
- Providencia stuartii (isolates:99; rSTs:49 tree)
- Providencia vermicola (isolates:1; rSTs:1)
- Providencia zhijiangensis (isolates:1)
- Xenorhabdus (isolates:129; rSTs:99 tree)
- Xenorhabdus aichiensis (isolates:1; rSTs:1)
- Xenorhabdus anantnagensis (isolates:1; rSTs:1)
- Xenorhabdus beddingii (isolates:1; rSTs:1)
- Xenorhabdus bovienii (isolates:57; rSTs:41 tree)
- Xenorhabdus budapestensis (isolates:2; rSTs:2)
- Xenorhabdus cabanillasii (isolates:3; rSTs:2)
- Xenorhabdus doucetiae (isolates:2; rSTs:1)
- Xenorhabdus eapokensis (isolates:1; rSTs:1)
- Xenorhabdus ehlersii (isolates:2; rSTs:1)
- Xenorhabdus griffiniae (isolates:1; rSTs:1)
- Xenorhabdus hominickii (isolates:2; rSTs:1)
- Xenorhabdus indica (isolates:2; rSTs:2)
- Xenorhabdus innexi (isolates:2; rSTs:1)
- Xenorhabdus ishibashii (isolates:1; rSTs:1)
- Xenorhabdus japonica (isolates:1; rSTs:1)
- Xenorhabdus khoisanae (isolates:2; rSTs:2)
- Xenorhabdus koppenhoeferi (isolates:1; rSTs:1)
- Xenorhabdus kozodoii (isolates:1; rSTs:1)
- Xenorhabdus lircayensis (isolates:1; rSTs:1)
- Xenorhabdus littoralis (isolates:2)
- Xenorhabdus mauleonii (isolates:2; rSTs:1)
- Xenorhabdus miraniensis (isolates:1; rSTs:1)
- Xenorhabdus nematophila (isolates:9; rSTs:4 tree)
- Xenorhabdus poinarii (isolates:1; rSTs:1)
- Xenorhabdus sp. (isolates:23; rSTs:23 tree)
- Xenorhabdus stockiae (isolates:1; rSTs:1)
- Xenorhabdus szentirmaii (isolates:3; rSTs:2)
- Xenorhabdus thuongxuanensis (isolates:1; rSTs:1)
- Xenorhabdus vietnamensis (isolates:1; rSTs:1)
- Xenorhabdus yunnanensis (isolates:1; rSTs:1)
- Arsenophonus (isolates:18; rSTs:12 tree)
- Pectobacteriaceae (isolates:823; rSTs:460 tree)
- Acerihabitans (isolates:2; rSTs:2)
- Affinibrenneria (isolates:1; rSTs:1)
- Affinibrenneria salicis (isolates:1; rSTs:1)
- Brenneria (isolates:39; rSTs:19 tree)
- Brenneria alni (isolates:1; rSTs:1)
- Brenneria bubanii (isolates:1; rSTs:1)
- Brenneria corticis (isolates:1)
- Brenneria goodwinii (isolates:14; rSTs:3 tree)
- Brenneria izadpanahii (isolates:1; rSTs:1)
- Brenneria izbisi (isolates:2; rSTs:1)
- Brenneria nigrifluens (isolates:2; rSTs:1)
- Brenneria roseae (isolates:2; rSTs:2)
- Brenneria rubrifaciens (isolates:1; rSTs:1)
- Brenneria salicis (isolates:3; rSTs:1)
- Brenneria sp. (isolates:8; rSTs:5 tree)
- Brenneria tiliae (isolates:3; rSTs:2)
- Dickeya (isolates:224; rSTs:92 tree)
- Dickeya aquatica (isolates:1; rSTs:1)
- Dickeya chrysanthemi (isolates:11; rSTs:10 tree)
- Dickeya dadantii (isolates:21; rSTs:14 tree)
- Dickeya dianthicola (isolates:84; rSTs:16 tree)
- Dickeya fangzhongdai (isolates:18; rSTs:11 tree)
- Dickeya lacustris (isolates:3; rSTs:1)
- Dickeya oryzae (isolates:8; rSTs:8 tree)
- Dickeya parazeae (isolates:2; rSTs:2)
- Dickeya poaceiphila (isolates:2; rSTs:1)
- Dickeya solani (isolates:52; rSTs:5 tree)
- Dickeya sp. (isolates:7; rSTs:9 tree)
- Dickeya undicola (isolates:3; rSTs:3 tree)
- Dickeya zeae (isolates:12; rSTs:11 tree)
- Lonsdalea (isolates:36; rSTs:10 tree)
- Musicola (isolates:4; rSTs:2)
- Pectobacterium (isolates:515; rSTs:333 tree)
- Pectobacterium actinidiae (isolates:5; rSTs:3 tree)
- Pectobacterium aquaticum (isolates:7; rSTs:7 tree)
- Pectobacterium aroidearum (isolates:27; rSTs:15 tree)
- Pectobacterium atrosepticum (isolates:22; rSTs:5 tree)
- Pectobacterium betavasculorum (isolates:2; rSTs:2)
- Pectobacterium brasiliense (isolates:120; rSTs:73 tree)
- Pectobacterium cacticida (isolates:3; rSTs:3)
- Pectobacterium carotovorum (isolates:71; rSTs:49 tree)
- Pectobacterium colocasium (isolates:1; rSTs:1)
- Pectobacterium fontis (isolates:1; rSTs:1)
- Pectobacterium jejuense (isolates:1; rSTs:1)
- Pectobacterium odoriferum (isolates:19; rSTs:12 tree)
- Pectobacterium parmentieri (isolates:60; rSTs:16 tree)
- Pectobacterium parvum (isolates:9; rSTs:8 tree)
- Pectobacterium peruviense (isolates:4; rSTs:3 tree)
- Pectobacterium polaris (isolates:29; rSTs:24 tree)
- Pectobacterium polonicum (isolates:4; rSTs:4 tree)
- Pectobacterium punjabense (isolates:8; rSTs:5 tree)
- Pectobacterium quasiaquaticum (isolates:7; rSTs:4 tree)
- Pectobacterium sp. (isolates:8; rSTs:12 tree)
- Pectobacterium versatile (isolates:101; rSTs:82 tree)
- Pectobacterium wasabiae (isolates:4; rSTs:1)
- Pectobacterium zantedeschiae (isolates:2; rSTs:2)
- Samsonia (isolates:2; rSTs:1)
- Samsonia erythrinae (isolates:2; rSTs:1)
- Thorselliaceae (isolates:1; rSTs:1)
- Yersiniaceae (isolates:4046; rSTs:1915)
- Candidatus Fukatsuia (isolates:3; rSTs:2)
- Candidatus Fukatsuia symbiotica (isolates:3; rSTs:2)
- Chania (isolates:2; rSTs:1)
- Chania multitudinisentens (isolates:2; rSTs:1)
- Chimaeribacter (isolates:6; rSTs:6 tree)
- Ewingella (isolates:6; rSTs:5 tree)
- Gibbsiella (isolates:5; rSTs:3 tree)
- Nissabacter (isolates:2; rSTs:2)
- Nissabacter archeti (isolates:2; rSTs:2)
- Rahnella (isolates:61; rSTs:55 tree)
- Rahnella aceris (isolates:8; rSTs:8 tree)
- Rahnella aquatilis (isolates:4; rSTs:3 tree)
- Rahnella bonaserana (isolates:2; rSTs:2)
- Rahnella bruchi (isolates:1; rSTs:1)
- Rahnella contaminans (isolates:2; rSTs:2)
- Rahnella ecdela (isolates:1; rSTs:1)
- Rahnella inusitata (isolates:3; rSTs:2)
- Rahnella laticis (isolates:2; rSTs:2)
- Rahnella perminowiae (isolates:7; rSTs:5 tree)
- Rahnella rivi (isolates:1; rSTs:1)
- Rahnella sikkimica (isolates:1; rSTs:1)
- Rahnella sp. (isolates:19; rSTs:19 tree)
- Rahnella variigena (isolates:5; rSTs:3 tree)
- Rahnella victoriana (isolates:4; rSTs:4 tree)
- Rahnella woolbedingensis (isolates:1; rSTs:1)
- Rouxiella (isolates:19; rSTs:16 tree)
- Serratia (isolates:931; rSTs:873 tree)
- Serratia bockelmannii (isolates:29; rSTs:10 tree)
- Serratia entomophila (isolates:68; rSTs:19 tree)
- Serratia ficaria (isolates:25; rSTs:20 tree)
- Serratia fonticola (isolates:75; rSTs:53 tree)
- Serratia grimesii (isolates:13; rSTs:10 tree)
- Serratia inhibens (isolates:2; rSTs:2)
- Serratia liquefaciens (isolates:80; rSTs:47 tree)
- Serratia marcescens (isolates:164; rSTs:88 tree)
- Serratia microhaemolytica (isolates:1; rSTs:1)
- Serratia nematodiphila (isolates:6; rSTs:5 tree)
- Serratia nevei (isolates:85; rSTs:18 tree)
- Serratia odorifera (isolates:6; rSTs:3 tree)
- Serratia oryzae (isolates:2; rSTs:2)
- Serratia plymuthica (isolates:30; rSTs:21 tree)
- Serratia proteamaculans (isolates:32; rSTs:22 tree)
- Serratia quinivorans (isolates:44; rSTs:27 tree)
- Serratia rhizosphaerae (isolates:2; rSTs:2)
- Serratia rubidaea (isolates:24; rSTs:14 tree)
- Serratia silvae (isolates:1; rSTs:1)
- Serratia sp. (isolates:109; rSTs:413 tree)
- Serratia surfactantfaciens (isolates:4; rSTs:4 tree)
- Serratia symbiotica (isolates:8; rSTs:9 tree)
- Serratia ureilytica (isolates:121; rSTs:82 tree)
- Yersinia (isolates:3011; rSTs:952 tree)
- Yersinia aldovae (isolates:11; rSTs:11 tree)
- Yersinia aleksiciae (isolates:13; rSTs:9 tree)
- Yersinia alsatica (isolates:10; rSTs:9 tree)
- Yersinia artesiana (isolates:4; rSTs:1)
- Yersinia bercovieri (isolates:18; rSTs:19 tree)
- Yersinia canariae (isolates:3; rSTs:3 tree)
- Yersinia enterocolitica (isolates:1389; rSTs:440 tree)
- Yersinia entomophaga (isolates:1; rSTs:1)
- Yersinia frederiksenii (isolates:12; rSTs:9 tree)
- Yersinia hibernica (isolates:3; rSTs:2)
- Yersinia intermedia (isolates:40; rSTs:35 tree)
- Yersinia kristensenii (isolates:34; rSTs:28 tree)
- Yersinia massiliensis (isolates:17; rSTs:20 tree)
- Yersinia mollaretii (isolates:32; rSTs:21 tree)
- Yersinia nurmii (isolates:2; rSTs:2)
- Yersinia pekkanenii (isolates:2; rSTs:1)
- Yersinia pestis (isolates:842; rSTs:94 tree)
- Yersinia proxima (isolates:10; rSTs:9 tree)
- Yersinia pseudotuberculosis (isolates:336; rSTs:110 tree)
- Yersinia rochesterensis (isolates:11; rSTs:9 tree)
- Yersinia rohdei (isolates:15; rSTs:17 tree)
- Yersinia ruckeri (isolates:176; rSTs:39 tree)
- Yersinia similis (isolates:9; rSTs:7 tree)
- Yersinia sp. (isolates:8; rSTs:47 tree)
- Yersinia thracica (isolates:4; rSTs:3 tree)
- Yersinia vastinensis (isolates:5; rSTs:4 tree)
- Yersinia wautersii (isolates:4; rSTs:2)
- Candidatus Fukatsuia (isolates:3; rSTs:2)
- Bruguierivoracaceae (isolates:15; rSTs:14 tree)
- Immundisolibacterales (isolates:1; rSTs:1)
- Kangiellales (isolates:10; rSTs:8 tree)
- Kangiellaceae (isolates:10; rSTs:8 tree)
- Kangiella (isolates:10; rSTs:8 tree)
- Kangiella aquimarina (isolates:2; rSTs:1)
- Kangiella geojedonensis (isolates:1; rSTs:1)
- Kangiella koreensis (isolates:1; rSTs:1)
- Kangiella profundi (isolates:2; rSTs:1)
- Kangiella sediminilitoris (isolates:1; rSTs:1)
- Kangiella shandongensis (isolates:1; rSTs:1)
- Kangiella spongicola (isolates:1; rSTs:1)
- Kangiella taiwanensis (isolates:1; rSTs:1)
- Kangiella (isolates:10; rSTs:8 tree)
- Kangiellaceae (isolates:10; rSTs:8 tree)
- Legionellales (isolates:4993; rSTs:927 tree)
- Coxiellaceae (isolates:178; rSTs:68 tree)
- Aquicella (isolates:3; rSTs:2)
- Candidatus Aquirickettsiella (isolates:1; rSTs:1)
- Candidatus Aquirickettsiella gammari (isolates:1; rSTs:1)
- Candidatus Berkiella (isolates:2; rSTs:2)
- Coxiella (isolates:163; rSTs:57 tree)
- Candidatus Coxiella mudrowiae (isolates:2; rSTs:2)
- Coxiella burnetii (isolates:154; rSTs:48 tree)
- Coxiella endosymbiont of Amblyomma americanum (isolates:1; rSTs:1)
- Coxiella endosymbiont of Amblyomma nuttalli (isolates:1; rSTs:1)
- Coxiella endosymbiont of Amblyomma sculptum (isolates:1; rSTs:1)
- Coxiella endosymbiont of Dermacentor marginatus (isolates:1; rSTs:1)
- Coxiella endosymbiont of Ornithodoros amblus (isolates:1; rSTs:1)
- Coxiella endosymbiont of Ornithodoros maritimus (isolates:1; rSTs:1)
- Coxiella endosymbiont of Rhipicephalus microplus (isolates:1; rSTs:1)
- Rickettsiella (isolates:6; rSTs:4 tree)
- Legionellaceae (isolates:4815; rSTs:859 tree)
- Fluoribacter (isolates:19; rSTs:11 tree)
- Legionella (isolates:4796; rSTs:848 tree)
- Candidatus Legionella polyplacis (isolates:1; rSTs:1)
- Legionella adelaidensis (isolates:3; rSTs:1)
- Legionella anisa (isolates:10; rSTs:3 tree)
- Legionella antarctica (isolates:1; rSTs:1)
- Legionella beliardensis (isolates:2; rSTs:1)
- Legionella birminghamensis (isolates:3; rSTs:3 tree)
- Legionella bononiensis (isolates:3; rSTs:1)
- Legionella bozemanae (isolates:5; rSTs:2)
- Legionella brunensis (isolates:2; rSTs:1)
- Legionella busanensis (isolates:2; rSTs:1)
- Legionella cardiaca (isolates:1; rSTs:1)
- Legionella cherrii (isolates:4; rSTs:2)
- Legionella cincinnatiensis (isolates:3; rSTs:1)
- Legionella clemsonensis (isolates:1; rSTs:1)
- Legionella donaldsonii (isolates:1; rSTs:1)
- Legionella drancourtii (isolates:1)
- Legionella drozanskii (isolates:2; rSTs:2)
- Legionella erythra (isolates:2; rSTs:1)
- Legionella fairfieldensis (isolates:2; rSTs:1)
- Legionella fallonii (isolates:1; rSTs:1)
- Legionella feeleii (isolates:5; rSTs:2)
- Legionella geestiana (isolates:6; rSTs:2)
- Legionella genomosp. 1 (isolates:1; rSTs:1)
- Legionella gratiana (isolates:3; rSTs:2)
- Legionella gresilensis (isolates:1; rSTs:1)
- Legionella hackeliae (isolates:3; rSTs:2)
- Legionella impletisoli (isolates:2; rSTs:1)
- Legionella israelensis (isolates:7; rSTs:3 tree)
- Legionella jamestowniensis (isolates:4; rSTs:2)
- Legionella jordanis (isolates:7; rSTs:3 tree)
- Legionella lansingensis (isolates:4; rSTs:1)
- Legionella londiniensis (isolates:3; rSTs:1)
- Legionella longbeachae (isolates:8; rSTs:5 tree)
- Legionella lytica (isolates:1; rSTs:1)
- Legionella maceachernii (isolates:4; rSTs:1)
- Legionella maioricensis (isolates:2; rSTs:1)
- Legionella massiliensis (isolates:2; rSTs:1)
- Legionella micdadei (isolates:7; rSTs:3 tree)
- Legionella moravica (isolates:5; rSTs:1)
- Legionella nagasakiensis (isolates:1; rSTs:1)
- Legionella nautarum (isolates:2; rSTs:1)
- Legionella norrlandica (isolates:1; rSTs:1)
- Legionella oakridgensis (isolates:5; rSTs:2)
- Legionella parisiensis (isolates:4; rSTs:1)
- Legionella pneumophila (isolates:4575; rSTs:736 tree)
- Legionella qingyii (isolates:3; rSTs:2)
- Legionella quateirensis (isolates:3; rSTs:1)
- Legionella quinlivanii (isolates:5; rSTs:2)
- Legionella rowbothamii (isolates:1; rSTs:1)
- Legionella rubrilucens (isolates:2; rSTs:1)
- Legionella sainthelensi (isolates:8; rSTs:6 tree)
- Legionella santicrucis (isolates:2; rSTs:1)
- Legionella saoudiensis (isolates:1; rSTs:1)
- Legionella septentrionalis (isolates:4; rSTs:4 tree)
- Legionella shakespearei (isolates:3; rSTs:1)
- Legionella sp. (isolates:14; rSTs:12 tree)
- Legionella spiritensis (isolates:4; rSTs:2)
- Legionella steelei (isolates:1; rSTs:1)
- Legionella steigerwaltii (isolates:3; rSTs:1)
- Legionella taurinensis (isolates:17; rSTs:3 tree)
- Legionella tucsonensis (isolates:2; rSTs:1)
- Legionella tunisiensis (isolates:1; rSTs:1)
- Legionella wadsworthii (isolates:3; rSTs:2)
- Legionella waltersii (isolates:3; rSTs:1)
- Legionella worsleiensis (isolates:2; rSTs:1)
- Legionella yabuuchiae (isolates:1; rSTs:1)
- Coxiellaceae (isolates:178; rSTs:68 tree)
- Methylococcales (isolates:110; rSTs:98 tree)
- Crenotrichaceae (isolates:2; rSTs:1)
- Methylococcaceae (isolates:105; rSTs:95 tree)
- Candidatus Methylospira (isolates:2; rSTs:2)
- Candidatus Methylospira mobilis (isolates:2; rSTs:2)
- Methylicorpusculum (isolates:1; rSTs:1)
- Methylicorpusculum oleiharenae (isolates:1; rSTs:1)
- Methylobacter (isolates:16; rSTs:15 tree)
- Candidatus Methylobacter favarea (isolates:1; rSTs:1)
- Candidatus Methylobacter oryzae (isolates:1; rSTs:1)
- Methylobacter luteus (isolates:1; rSTs:1)
- Methylobacter marinus (isolates:1; rSTs:1)
- Methylobacter psychrophilus (isolates:1; rSTs:1)
- Methylobacter sp. (isolates:5; rSTs:4 tree)
- Methylobacter tundripaludum (isolates:5; rSTs:5 tree)
- Methylobacter whittenburyi (isolates:1; rSTs:1)
- Methylocaldum (isolates:9; rSTs:7 tree)
- Methylococcus (isolates:13; rSTs:12 tree)
- Methylocucumis (isolates:1; rSTs:1)
- Methylocucumis oryzae (isolates:1; rSTs:1)
- Methylogaea (isolates:2; rSTs:2)
- Methylogaea oryzae (isolates:2; rSTs:2)
- Methyloglobulus (isolates:1; rSTs:1)
- Methyloglobulus morosus (isolates:1; rSTs:1)
- Methylomagnum (isolates:2; rSTs:2)
- Methylomagnum ishizawai (isolates:2; rSTs:2)
- Methylomarinum (isolates:2; rSTs:2)
- Methylomicrobium (isolates:6; rSTs:5 tree)
- Methylomonas (isolates:38; rSTs:34 tree)
- Methylomonas albis (isolates:2; rSTs:1)
- Methylomonas denitrificans (isolates:1; rSTs:1)
- Methylomonas koyamae (isolates:8; rSTs:7 tree)
- Methylomonas lenta (isolates:1; rSTs:1)
- Methylomonas methanica (isolates:2; rSTs:2)
- Methylomonas montana (isolates:1; rSTs:1)
- Methylomonas paludis (isolates:1; rSTs:1)
- Methylomonas rapida (isolates:1; rSTs:1)
- Methylomonas rhizoryzae (isolates:1; rSTs:1)
- Methylomonas sp. (isolates:20; rSTs:18 tree)
- Methyloprofundus (isolates:1; rSTs:1)
- Methyloprofundus sedimenti (isolates:1; rSTs:1)
- Methylosarcina (isolates:1; rSTs:1)
- Methylosarcina fibrata (isolates:1; rSTs:1)
- Methyloterricola (isolates:1; rSTs:1)
- Methyloterricola oryzae (isolates:1; rSTs:1)
- Methylotetracoccus (isolates:1; rSTs:1)
- Methylotetracoccus oryzae (isolates:1; rSTs:1)
- Methylotuvimicrobium (isolates:4; rSTs:3 tree)
- Methylovulum (isolates:4; rSTs:4 tree)
- Candidatus Methylospira (isolates:2; rSTs:2)
- Methylothermaceae (isolates:3; rSTs:2 tree)
- Methylohalomonadales (isolates:1; rSTs:1)
- Moraxellales (isolates:26473; rSTs:6101)
- Moraxellaceae (isolates:26473; rSTs:6101)
- Acinetobacter (isolates:24377; rSTs:4825)
- Acinetobacter albensis (isolates:2; rSTs:2)
- Acinetobacter amyesii (isolates:7; rSTs:6 tree)
- Acinetobacter apis (isolates:1; rSTs:1)
- Acinetobacter baretiae (isolates:2; rSTs:2)
- Acinetobacter baumannii (isolates:21456; rSTs:2860)
- Acinetobacter baylyi (isolates:19; rSTs:4 tree)
- Acinetobacter beijerinckii (isolates:6; rSTs:5 tree)
- Acinetobacter bereziniae (isolates:83; rSTs:55 tree)
- Acinetobacter bohemicus (isolates:3; rSTs:3 tree)
- Acinetobacter boissieri (isolates:1; rSTs:1)
- Acinetobacter bouvetii (isolates:5; rSTs:2)
- Acinetobacter brisouii (isolates:6; rSTs:4 tree)
- Acinetobacter calcoaceticus (isolates:34; rSTs:38 tree)
- Acinetobacter celticus (isolates:1; rSTs:1)
- Acinetobacter chengduensis (isolates:1; rSTs:1)
- Acinetobacter chinensis (isolates:3; rSTs:3 tree)
- Acinetobacter colistiniresistens (isolates:15; rSTs:7 tree)
- Acinetobacter courvalinii (isolates:12; rSTs:11 tree)
- Acinetobacter cumulans (isolates:6; rSTs:6 tree)
- Acinetobacter defluvii (isolates:2; rSTs:3 tree)
- Acinetobacter dispersus (isolates:8; rSTs:8 tree)
- Acinetobacter entericus (isolates:1; rSTs:1)
- Acinetobacter equi (isolates:1; rSTs:1)
- Acinetobacter faecalis (isolates:15; rSTs:15 tree)
- Acinetobacter gandensis (isolates:2; rSTs:1)
- Acinetobacter geminorum (isolates:2; rSTs:2)
- Acinetobacter gerneri (isolates:11; rSTs:3 tree)
- Acinetobacter guerrae (isolates:3; rSTs:3 tree)
- Acinetobacter guillouiae (isolates:19; rSTs:15 tree)
- Acinetobacter gyllenbergii (isolates:7; rSTs:5 tree)
- Acinetobacter haemolyticus (isolates:64; rSTs:48 tree)
- Acinetobacter halotolerans (isolates:1; rSTs:1)
- Acinetobacter harbinensis (isolates:2; rSTs:2)
- Acinetobacter higginsii (isolates:11; rSTs:11 tree)
- Acinetobacter ihumii (isolates:1; rSTs:1)
- Acinetobacter indicus (isolates:125; rSTs:103 tree)
- Acinetobacter johnsonii (isolates:86; rSTs:76 tree)
- Acinetobacter junii (isolates:87; rSTs:79 tree)
- Acinetobacter kanungonis (isolates:1; rSTs:1)
- Acinetobacter kookii (isolates:1; rSTs:1)
- Acinetobacter kyonggiensis (isolates:1; rSTs:1)
- Acinetobacter lactucae (isolates:19; rSTs:24 tree)
- Acinetobacter lanii (isolates:2; rSTs:2)
- Acinetobacter larvae (isolates:1; rSTs:1)
- Acinetobacter lwoffii (isolates:55; rSTs:47 tree)
- Acinetobacter marinus (isolates:1; rSTs:1)
- Acinetobacter modestus (isolates:13; rSTs:8 tree)
- Acinetobacter nectaris (isolates:5; rSTs:3 tree)
- Acinetobacter nematophilus (isolates:1; rSTs:1)
- Acinetobacter nosocomialis (isolates:277; rSTs:186 tree)
- Acinetobacter oleivorans (isolates:43; rSTs:29 tree)
- Acinetobacter parvus (isolates:6; rSTs:5 tree)
- Acinetobacter pecorum (isolates:1; rSTs:1)
- Acinetobacter piscicola (isolates:1; rSTs:1)
- Acinetobacter pittii (isolates:709; rSTs:321 tree)
- Acinetobacter pollinis (isolates:5; rSTs:2)
- Acinetobacter populi (isolates:1; rSTs:1)
- Acinetobacter portensis (isolates:2; rSTs:2)
- Acinetobacter pragensis (isolates:1; rSTs:1)
- Acinetobacter proteolyticus (isolates:5; rSTs:5 tree)
- Acinetobacter pseudolwoffii (isolates:15; rSTs:15 tree)
- Acinetobacter pullicarnis (isolates:1; rSTs:1)
- Acinetobacter puyangensis (isolates:1; rSTs:1)
- Acinetobacter qingfengensis (isolates:2; rSTs:1)
- Acinetobacter radioresistens (isolates:65; rSTs:48 tree)
- Acinetobacter rathckeae (isolates:2; rSTs:2)
- Acinetobacter rongchengensis (isolates:1; rSTs:1)
- Acinetobacter rudis (isolates:2; rSTs:1)
- Acinetobacter schindleri (isolates:23; rSTs:20 tree)
- Acinetobacter sedimenti (isolates:1; rSTs:1)
- Acinetobacter seifertii (isolates:76; rSTs:50 tree)
- Acinetobacter shaoyimingii (isolates:2; rSTs:2)
- Acinetobacter sichuanensis (isolates:2; rSTs:2)
- Acinetobacter silvestris (isolates:1; rSTs:1)
- Acinetobacter soli (isolates:58; rSTs:51 tree)
- Acinetobacter sp. (isolates:648; rSTs:443 tree)
- Acinetobacter stercoris (isolates:1; rSTs:1)
- Acinetobacter tandoii (isolates:5; rSTs:3)
- Acinetobacter terrae (isolates:8; rSTs:8 tree)
- Acinetobacter terrestris (isolates:6; rSTs:6 tree)
- Acinetobacter thutiue (isolates:3; rSTs:2)
- Acinetobacter tianfuensis (isolates:1; rSTs:1)
- Acinetobacter tibetensis (isolates:1; rSTs:1)
- Acinetobacter tjernbergiae (isolates:3; rSTs:1)
- Acinetobacter towneri (isolates:46; rSTs:28 tree)
- Acinetobacter ursingii (isolates:99; rSTs:62 tree)
- Acinetobacter variabilis (isolates:16; rSTs:18 tree)
- Acinetobacter venetianus (isolates:13; rSTs:9 tree)
- Acinetobacter vivianii (isolates:7; rSTs:6 tree)
- Acinetobacter wanghuae (isolates:2; rSTs:1)
- Acinetobacter wuhouensis (isolates:4; rSTs:4 tree)
- Agitococcus (isolates:1; rSTs:1)
- Agitococcus lubricus (isolates:1; rSTs:1)
- Alkanindiges (isolates:3; rSTs:3 tree)
- Amnimonas (isolates:1; rSTs:1)
- Amnimonas aquatica (isolates:1; rSTs:1)
- Aquirhabdus (isolates:1; rSTs:1)
- Aquirhabdus parva (isolates:1; rSTs:1)
- Fluviicoccus (isolates:1; rSTs:1)
- Fluviicoccus keumensis (isolates:1; rSTs:1)
- Moraxella (isolates:1888; rSTs:1100 tree)
- Moraxella atlantae (isolates:7; rSTs:5 tree)
- Moraxella boevrei (isolates:1; rSTs:1)
- Moraxella bovis (isolates:39; rSTs:18 tree)
- Moraxella bovoculi (isolates:5; rSTs:184 tree)
- Moraxella canis (isolates:5; rSTs:3)
- Moraxella caprae (isolates:2; rSTs:1)
- Moraxella catarrhalis (isolates:1729; rSTs:786 tree)
- Moraxella caviae (isolates:2; rSTs:1)
- Moraxella cuniculi (isolates:3; rSTs:2)
- Moraxella equi (isolates:2; rSTs:1)
- Moraxella haemolytica (isolates:1)
- Moraxella lacunata (isolates:8; rSTs:6 tree)
- Moraxella lincolnii (isolates:1; rSTs:1)
- Moraxella macacae (isolates:1; rSTs:1)
- Moraxella nasibovis (isolates:1; rSTs:1)
- Moraxella nasicaprae (isolates:1; rSTs:1)
- Moraxella nasovis (isolates:1; rSTs:1)
- Moraxella nonliquefaciens (isolates:8; rSTs:7 tree)
- Moraxella oblonga (isolates:1; rSTs:1)
- Moraxella oculi (isolates:1)
- Moraxella osloensis (isolates:47; rSTs:48 tree)
- Moraxella ovis (isolates:4; rSTs:3 tree)
- Moraxella pluranimalium (isolates:1; rSTs:1)
- Moraxella porci (isolates:2; rSTs:2)
- Moraxella sp. (isolates:15; rSTs:25 tree)
- Paraperlucidibaca (isolates:1; rSTs:1)
- Paraperlucidibaca baekdonensis (isolates:1; rSTs:1)
- Psychrobacter (isolates:200; rSTs:168 tree)
- Psychrobacter aestuarii (isolates:1; rSTs:1)
- Psychrobacter alimentarius (isolates:3; rSTs:3 tree)
- Psychrobacter aquaticus (isolates:2; rSTs:1)
- Psychrobacter aquimaris (isolates:2; rSTs:1)
- Psychrobacter arcticus (isolates:2; rSTs:1)
- Psychrobacter arenosus (isolates:1; rSTs:1)
- Psychrobacter celer (isolates:4; rSTs:3)
- Psychrobacter cibarius (isolates:1; rSTs:1)
- Psychrobacter ciconiae (isolates:2; rSTs:2)
- Psychrobacter coccoides (isolates:1; rSTs:1)
- Psychrobacter communis (isolates:1; rSTs:1)
- Psychrobacter cryohalolentis (isolates:3; rSTs:1)
- Psychrobacter faecalis (isolates:2; rSTs:1)
- Psychrobacter fjordensis (isolates:1; rSTs:1)
- Psychrobacter fozii (isolates:2; rSTs:2)
- Psychrobacter frigidicola (isolates:3; rSTs:2)
- Psychrobacter fulvigenes (isolates:1; rSTs:1)
- Psychrobacter glaciei (isolates:3; rSTs:2)
- Psychrobacter glacincola (isolates:1; rSTs:1)
- Psychrobacter halodurans (isolates:1; rSTs:1)
- Psychrobacter immobilis (isolates:5; rSTs:2)
- Psychrobacter jeotgali (isolates:1; rSTs:1)
- Psychrobacter luti (isolates:2; rSTs:1)
- Psychrobacter lutiphocae (isolates:2; rSTs:1)
- Psychrobacter maritimus (isolates:2; rSTs:2)
- Psychrobacter muriicola (isolates:1; rSTs:1)
- Psychrobacter namhaensis (isolates:3; rSTs:2)
- Psychrobacter nivimaris (isolates:2; rSTs:2)
- Psychrobacter okhotskensis (isolates:3; rSTs:3 tree)
- Psychrobacter pacificensis (isolates:5; rSTs:3 tree)
- Psychrobacter pasteurii (isolates:1; rSTs:1)
- Psychrobacter phenylpyruvicus (isolates:4; rSTs:1)
- Psychrobacter piechaudii (isolates:1; rSTs:1)
- Psychrobacter piscatorii (isolates:2; rSTs:2)
- Psychrobacter proteolyticus (isolates:4; rSTs:2)
- Psychrobacter pulmonis (isolates:1; rSTs:1)
- Psychrobacter pygoscelis (isolates:1; rSTs:1)
- Psychrobacter sanguinis (isolates:1; rSTs:1)
- Psychrobacter sp. (isolates:118; rSTs:108 tree)
- Psychrobacter submarinus (isolates:2; rSTs:2)
- Psychrobacter urativorans (isolates:1; rSTs:1)
- Psychrobacter vallis (isolates:1; rSTs:1)
- Acinetobacter (isolates:24377; rSTs:4825)
- Moraxellaceae (isolates:26473; rSTs:6101)
- Nevskiales (isolates:24; rSTs:23 tree)
- Algiphilaceae (isolates:1; rSTs:1)
- Nevskiaceae (isolates:23; rSTs:22 tree)
- Flagellatimonas (isolates:1; rSTs:1)
- Flagellatimonas centrodinii (isolates:1; rSTs:1)
- Fontimonas (isolates:1; rSTs:1)
- Fontimonas thermophila (isolates:1; rSTs:1)
- Hydrocarboniphaga (isolates:2; rSTs:2)
- Nevskia (isolates:2; rSTs:2)
- Panacagrimonas (isolates:2; rSTs:1)
- Panacagrimonas perspica (isolates:2; rSTs:1)
- Polycyclovorans (isolates:1; rSTs:1)
- Polycyclovorans algicola (isolates:1; rSTs:1)
- Sinimarinibacterium (isolates:3; rSTs:3 tree)
- Solimonas (isolates:9; rSTs:9 tree)
- Solimonas aquatica (isolates:1; rSTs:1)
- Solimonas flava (isolates:1; rSTs:1)
- Solimonas fluminis (isolates:1; rSTs:1)
- Solimonas marina (isolates:1; rSTs:1)
- Solimonas soli (isolates:1; rSTs:1)
- Solimonas sp. (isolates:2; rSTs:2)
- Solimonas terrae (isolates:1; rSTs:1)
- Solimonas variicoloris (isolates:1; rSTs:1)
- Stagnimonas (isolates:1; rSTs:1)
- Stagnimonas aquatica (isolates:1; rSTs:1)
- Stenotrophobium (isolates:1; rSTs:1)
- Stenotrophobium rhamnosiphilum (isolates:1; rSTs:1)
- Flagellatimonas (isolates:1; rSTs:1)
- Oceanospirillales (isolates:886; rSTs:742 tree)
- Aestuariirhabdaceae (isolates:3; rSTs:2)
- Alcanivoracaceae (isolates:69; rSTs:59 tree)
- Alcanivorax (isolates:41; rSTs:34 tree)
- Alcanivorax borkumensis (isolates:1; rSTs:1)
- Alcanivorax hongdengensis (isolates:1; rSTs:1)
- Alcanivorax jadensis (isolates:1; rSTs:1)
- Alcanivorax limicola (isolates:1; rSTs:1)
- Alcanivorax nanhaiticus (isolates:1; rSTs:1)
- Alcanivorax quisquiliarum (isolates:1; rSTs:1)
- Alcanivorax sediminis (isolates:1; rSTs:1)
- Alcanivorax sp. (isolates:33; rSTs:26 tree)
- Alcanivorax xiamenensis (isolates:1; rSTs:1)
- Alloalcanivorax (isolates:17; rSTs:14 tree)
- Alloalcanivorax balearicus (isolates:1; rSTs:1)
- Alloalcanivorax dieselolei (isolates:2; rSTs:1)
- Alloalcanivorax gelatiniphagus (isolates:1; rSTs:1)
- Alloalcanivorax marinus (isolates:1; rSTs:1)
- Alloalcanivorax mobilis (isolates:1; rSTs:1)
- Alloalcanivorax profundimaris (isolates:2; rSTs:2)
- Alloalcanivorax venustensis (isolates:1; rSTs:1)
- Alloalcanivorax xenomutans (isolates:8; rSTs:6 tree)
- Isoalcanivorax (isolates:2; rSTs:3 tree)
- Marinicella (isolates:9; rSTs:8 tree)
- Marinicella gelatinilytica (isolates:1; rSTs:1)
- Marinicella litoralis (isolates:2; rSTs:1)
- Marinicella marina (isolates:2; rSTs:2)
- Marinicella pacifica (isolates:1; rSTs:1)
- Marinicella rhabdoformis (isolates:1; rSTs:1)
- Marinicella sediminis (isolates:1; rSTs:1)
- Marinicella sp. (isolates:1; rSTs:1 tree)
- Alcanivorax (isolates:41; rSTs:34 tree)
- Balneatrichaceae (isolates:6; rSTs:5 tree)
- Endozoicomonadaceae (isolates:26; rSTs:23 tree)
- Endozoicomonas (isolates:24; rSTs:21 tree)
- Endozoicomonas acroporae (isolates:3; rSTs:3 tree)
- Endozoicomonas arenosclerae (isolates:2; rSTs:1)
- Endozoicomonas ascidiicola (isolates:2; rSTs:2)
- Endozoicomonas atrinae (isolates:1; rSTs:1)
- Endozoicomonas elysicola (isolates:2; rSTs:2)
- Endozoicomonas euniceicola (isolates:1; rSTs:1)
- Endozoicomonas gorgoniicola (isolates:1; rSTs:1)
- Endozoicomonas montiporae (isolates:2; rSTs:1)
- Endozoicomonas numazuensis (isolates:1; rSTs:1)
- Endozoicomonas sp. (isolates:9; rSTs:8 tree)
- Kistimonas (isolates:1; rSTs:1)
- Kistimonas asteriae (isolates:1; rSTs:1)
- Parendozoicomonas (isolates:1; rSTs:1)
- Parendozoicomonas haliclonae (isolates:1; rSTs:1)
- Endozoicomonas (isolates:24; rSTs:21 tree)
- Hahellaceae (isolates:9; rSTs:8 tree)
- Halomonadaceae (isolates:549; rSTs:451 tree)
- Aidingimonas (isolates:3; rSTs:2)
- Candidatus Carsonella (isolates:3)
- Candidatus Johnevansia (isolates:1)
- Candidatus Johnevansia muelleri (isolates:1)
- Candidatus Portiera (isolates:12; rSTs:1)
- Candidatus Portiera aleyrodidarum (isolates:12; rSTs:1)
- Carnimonas (isolates:1; rSTs:1)
- Carnimonas nigrificans (isolates:1; rSTs:1)
- Chromohalobacter (isolates:34; rSTs:24 tree)
- Chromohalobacter beijerinckii (isolates:1; rSTs:1)
- Chromohalobacter canadensis (isolates:6; rSTs:4 tree)
- Chromohalobacter japonicus (isolates:3; rSTs:3 tree)
- Chromohalobacter marismortui (isolates:1; rSTs:1)
- Chromohalobacter moromii (isolates:3; rSTs:3 tree)
- Chromohalobacter nigrandesensis (isolates:1; rSTs:1)
- Chromohalobacter salexigens (isolates:6; rSTs:6 tree)
- Chromohalobacter sarecensis (isolates:1; rSTs:1)
- Chromohalobacter sp. (isolates:12; rSTs:4 tree)
- Cobetia (isolates:41; rSTs:36 tree)
- Halomonas (isolates:396; rSTs:335 tree)
- Halomonas aerodenitrificans (isolates:1; rSTs:1)
- Halomonas aestuarii (isolates:1; rSTs:1)
- Halomonas alimentaria (isolates:2; rSTs:2)
- Halomonas alkaliantarctica (isolates:1; rSTs:1)
- Halomonas alkalicola (isolates:2; rSTs:2)
- Halomonas alkaliphila (isolates:4; rSTs:3 tree)
- Halomonas alkalisoli (isolates:2; rSTs:2)
- Halomonas almeriensis (isolates:1; rSTs:1)
- Halomonas andesensis (isolates:1; rSTs:1)
- Halomonas anticariensis (isolates:3; rSTs:1)
- Halomonas antri (isolates:1; rSTs:1)
- Halomonas aquamarina (isolates:1; rSTs:1)
- Halomonas arcis (isolates:1; rSTs:1)
- Halomonas axialensis (isolates:3; rSTs:3 tree)
- Halomonas azerbaijanica (isolates:1; rSTs:1)
- Halomonas azerica (isolates:1; rSTs:1)
- Halomonas bachuensis (isolates:1; rSTs:1)
- Halomonas beimenensis (isolates:1; rSTs:1)
- Halomonas binhaiensis (isolates:1; rSTs:1)
- Halomonas boliviensis (isolates:2; rSTs:1)
- Halomonas campaniensis (isolates:1; rSTs:1)
- Halomonas campisalis (isolates:2; rSTs:2)
- Halomonas casei (isolates:2)
- Halomonas caseinilytica (isolates:5; rSTs:4 tree)
- Halomonas cerina (isolates:1; rSTs:1)
- Halomonas chromatireducens (isolates:1; rSTs:1)
- Halomonas citrativorans (isolates:4)
- Halomonas colorata (isolates:2)
- Halomonas cupida (isolates:2; rSTs:1)
- Halomonas daqiaonensis (isolates:1; rSTs:1)
- Halomonas denitrificans (isolates:1; rSTs:1)
- Halomonas desiderata (isolates:8; rSTs:7 tree)
- Halomonas dongshanensis (isolates:1; rSTs:1)
- Halomonas elongata (isolates:8; rSTs:5 tree)
- Halomonas endophytica (isolates:1; rSTs:1)
- Halomonas ethanolica (isolates:1; rSTs:1)
- Halomonas eurihalina (isolates:2; rSTs:1)
- Halomonas faecis (isolates:1; rSTs:1)
- Halomonas flagellata (isolates:1; rSTs:1)
- Halomonas fontilapidosi (isolates:1; rSTs:1)
- Halomonas garicola (isolates:1; rSTs:1)
- Halomonas gemina (isolates:1; rSTs:1)
- Halomonas getboli (isolates:1; rSTs:1)
- Halomonas glaciei (isolates:1; rSTs:1)
- Halomonas gomseomensis (isolates:1; rSTs:1)
- Halomonas gudaonensis (isolates:1; rSTs:1)
- Halomonas halmophila (isolates:1; rSTs:1)
- Halomonas halocynthiae (isolates:1; rSTs:1)
- Halomonas halodenitrificans (isolates:1; rSTs:1)
- Halomonas halophila (isolates:2; rSTs:1)
- Halomonas hamiltonii (isolates:1; rSTs:1)
- Halomonas heilongjiangensis (isolates:2; rSTs:1)
- Halomonas hibernica (isolates:1; rSTs:1)
- Halomonas huangheensis (isolates:2; rSTs:1)
- Halomonas humidisoli (isolates:1; rSTs:1)
- Halomonas hydrothermalis (isolates:1; rSTs:1)
- Halomonas icarae (isolates:2; rSTs:1)
- Halomonas ilicicola (isolates:1; rSTs:1)
- Halomonas janggokensis (isolates:3; rSTs:2)
- Halomonas jeotgali (isolates:1; rSTs:1)
- Halomonas jincaotanensis (isolates:1; rSTs:1)
- Halomonas johnsoniae (isolates:1; rSTs:1)
- Halomonas kalidii (isolates:2)
- Halomonas kenyensis (isolates:2; rSTs:1)
- Halomonas koreensis (isolates:1; rSTs:1)
- Halomonas korlensis (isolates:1; rSTs:1)
- Halomonas lactosivorans (isolates:1; rSTs:1)
- Halomonas lionensis (isolates:1; rSTs:1)
- Halomonas litopenaei (isolates:3; rSTs:3 tree)
- Halomonas llamarensis (isolates:1; rSTs:1)
- Halomonas lutea (isolates:2; rSTs:1)
- Halomonas lutescens (isolates:1; rSTs:1)
- Halomonas lysinitropha (isolates:1; rSTs:1)
- Halomonas malpeensis (isolates:1; rSTs:1)
- Halomonas marinisediminis (isolates:1; rSTs:1)
- Halomonas maris (isolates:1; rSTs:1)
- Halomonas massiliensis (isolates:1; rSTs:1)
- Halomonas maura (isolates:1)
- Halomonas meridiana (isolates:6; rSTs:3 tree)
- Halomonas mongoliensis (isolates:1; rSTs:1)
- Halomonas montanilacus (isolates:1; rSTs:1)
- Halomonas muralis (isolates:1; rSTs:1)
- Halomonas nanhaiensis (isolates:1; rSTs:1)
- Halomonas neptunia (isolates:3; rSTs:1)
- Halomonas nigrificans (isolates:1; rSTs:1)
- Halomonas niordiana (isolates:1; rSTs:1)
- Halomonas nitroreducens (isolates:1; rSTs:1)
- Halomonas olivaria (isolates:1; rSTs:1)
- Halomonas organivorans (isolates:1; rSTs:1)
- Halomonas pacifica (isolates:3; rSTs:3 tree)
- Halomonas pantelleriensis (isolates:1; rSTs:1)
- Halomonas pellis (isolates:1; rSTs:1)
- Halomonas piezotolerans (isolates:3; rSTs:2)
- Halomonas piscis (isolates:3; rSTs:3 tree)
- Halomonas populi (isolates:3; rSTs:3 tree)
- Halomonas profundi (isolates:3; rSTs:2)
- Halomonas profundus (isolates:1; rSTs:1)
- Halomonas qaidamensis (isolates:1; rSTs:1)
- Halomonas qiaohouensis (isolates:1; rSTs:1)
- Halomonas qijiaojingensis (isolates:1; rSTs:1)
- Halomonas ramblicola (isolates:1; rSTs:1)
- Halomonas rhizosphaerae (isolates:2)
- Halomonas rituensis (isolates:1; rSTs:1)
- Halomonas sabkhae (isolates:1; rSTs:1)
- Halomonas saccharevitans (isolates:2; rSTs:2)
- Halomonas salicampi (isolates:1; rSTs:1)
- Halomonas salina (isolates:1; rSTs:1)
- Halomonas salinarum (isolates:1; rSTs:1)
- Halomonas salipaludis (isolates:1; rSTs:1)
- Halomonas saliphila (isolates:1; rSTs:1)
- Halomonas sedimenti (isolates:1; rSTs:1)
- Halomonas shengliensis (isolates:1; rSTs:1)
- Halomonas smyrnensis (isolates:1; rSTs:1)
- Halomonas socia (isolates:1; rSTs:1)
- Halomonas songnenensis (isolates:1; rSTs:1)
- Halomonas sp. (isolates:168; rSTs:151 tree)
- Halomonas stenophila (isolates:1; rSTs:1)
- Halomonas stevensii (isolates:1; rSTs:1)
- Halomonas subglaciescola (isolates:1; rSTs:1)
- Halomonas subterranea (isolates:1; rSTs:1)
- Halomonas sulfidaeris (isolates:2; rSTs:2)
- Halomonas sulfidivorans (isolates:1; rSTs:1)
- Halomonas sulfidoxydans (isolates:1; rSTs:1)
- Halomonas taeanensis (isolates:3; rSTs:3 tree)
- Halomonas tianxiuensis (isolates:1; rSTs:1)
- Halomonas titanicae (isolates:5; rSTs:5 tree)
- Halomonas urmiana (isolates:1; rSTs:1)
- Halomonas urumqiensis (isolates:3; rSTs:1)
- Halomonas utahensis (isolates:2; rSTs:1)
- Halomonas ventosae (isolates:3; rSTs:3 tree)
- Halomonas venusta (isolates:11; rSTs:8 tree)
- Halomonas vilamensis (isolates:1; rSTs:1)
- Halomonas xianhensis (isolates:2; rSTs:2)
- Halomonas xinjiangensis (isolates:1; rSTs:1)
- Halomonas zhangzhouensis (isolates:1; rSTs:1)
- Halomonas zhanjiangensis (isolates:1; rSTs:1)
- Halomonas zhaodongensis (isolates:1; rSTs:1)
- Halomonas zhuhanensis (isolates:1; rSTs:1)
- Halomonas zincidurans (isolates:1; rSTs:1)
- Halotalea (isolates:2; rSTs:2)
- Halotalea alkalilenta (isolates:2; rSTs:2)
- Halovibrio (isolates:3; rSTs:3 tree)
- Kushneria (isolates:11; rSTs:10 tree)
- Kushneria aurantia (isolates:1; rSTs:1)
- Kushneria avicenniae (isolates:1; rSTs:1)
- Kushneria indalinina (isolates:1; rSTs:1)
- Kushneria konosiri (isolates:1; rSTs:1)
- Kushneria marisflavi (isolates:2; rSTs:1)
- Kushneria pakistanensis (isolates:1; rSTs:1)
- Kushneria phosphatilytica (isolates:2; rSTs:2)
- Kushneria phyllosphaerae (isolates:1; rSTs:1)
- Kushneria sinocarnis (isolates:1; rSTs:1)
- Larsenimonas (isolates:5; rSTs:4 tree)
- Modicisalibacter (isolates:4; rSTs:3 tree)
- Phytohalomonas (isolates:1; rSTs:1)
- Phytohalomonas tamaricis (isolates:1; rSTs:1)
- Pistricoccus (isolates:1; rSTs:1)
- Pistricoccus aurantiacus (isolates:1; rSTs:1)
- Salinicola (isolates:29; rSTs:27 tree)
- Salinicola acroporae (isolates:2; rSTs:1)
- Salinicola aestuarinus (isolates:1; rSTs:1)
- Salinicola corii (isolates:1; rSTs:1)
- Salinicola endophyticus (isolates:2; rSTs:2)
- Salinicola halimionae (isolates:1; rSTs:1)
- Salinicola halophilus (isolates:1; rSTs:1)
- Salinicola halophyticus (isolates:1; rSTs:1)
- Salinicola lusitanus (isolates:1; rSTs:1)
- Salinicola peritrichatus (isolates:1; rSTs:1)
- Salinicola rhizosphaerae (isolates:1; rSTs:1)
- Salinicola salarius (isolates:3; rSTs:3 tree)
- Salinicola socius (isolates:2; rSTs:2)
- Salinicola sp. (isolates:11; rSTs:10 tree)
- Salinicola tamaricis (isolates:1; rSTs:1)
- Zymobacter (isolates:2; rSTs:1)
- Zymobacter palmae (isolates:2; rSTs:1)
- Litorivicinaceae (isolates:1; rSTs:1)
- Natronospirillaceae (isolates:1; rSTs:1)
- Oceanospirillaceae (isolates:193; rSTs:167 tree)
- Aliamphritea (isolates:3; rSTs:3 tree)
- Allopseudospirillum (isolates:1; rSTs:1)
- Allopseudospirillum japonicum (isolates:1; rSTs:1)
- Amphritea (isolates:12; rSTs:8 tree)
- Bacterioplanes (isolates:2; rSTs:1)
- Bacterioplanes sanyensis (isolates:2; rSTs:1)
- Bacterioplanoides (isolates:1; rSTs:1)
- Bacterioplanoides sp. (isolates:1; rSTs:1)
- Bermanella (isolates:2; rSTs:1)
- Bermanella marisrubri (isolates:2; rSTs:1)
- Litoribrevibacter (isolates:1; rSTs:1)
- Litoribrevibacter albus (isolates:1; rSTs:1)
- Maribrevibacterium (isolates:1; rSTs:1)
- Maribrevibacterium harenarium (isolates:1; rSTs:1)
- Marinobacterium (isolates:24; rSTs:20 tree)
- Marinobacterium aestuarii (isolates:1; rSTs:1)
- Marinobacterium alkalitolerans (isolates:1; rSTs:1)
- Marinobacterium arenosum (isolates:1; rSTs:1)
- Marinobacterium halophilum (isolates:1; rSTs:1)
- Marinobacterium iners (isolates:2; rSTs:2)
- Marinobacterium jannaschii (isolates:1; rSTs:1)
- Marinobacterium lacunae (isolates:1; rSTs:1)
- Marinobacterium litorale (isolates:1; rSTs:1)
- Marinobacterium lutimaris (isolates:1; rSTs:1)
- Marinobacterium mangrovicola (isolates:1; rSTs:1)
- Marinobacterium marinum (isolates:1)
- Marinobacterium nitratireducens (isolates:1; rSTs:1)
- Marinobacterium profundum (isolates:1; rSTs:1)
- Marinobacterium ramblicola (isolates:1; rSTs:1)
- Marinobacterium rhizophilum (isolates:2; rSTs:1)
- Marinobacterium sedimentorum (isolates:1; rSTs:1)
- Marinobacterium sediminicola (isolates:2; rSTs:1)
- Marinobacterium stanieri (isolates:2; rSTs:2)
- Marinobacterium weihaiense (isolates:1)
- Marinobacterium zhoushanense (isolates:1; rSTs:1)
- Marinomonas (isolates:65; rSTs:59 tree)
- Marinomonas agarivorans (isolates:1; rSTs:1)
- Marinomonas alcarazii (isolates:1; rSTs:1)
- Marinomonas algarum (isolates:1; rSTs:1)
- Marinomonas algicola (isolates:1; rSTs:1)
- Marinomonas aquimarina (isolates:2; rSTs:1)
- Marinomonas aquiplantarum (isolates:1; rSTs:1)
- Marinomonas arctica (isolates:3; rSTs:2)
- Marinomonas atlantica (isolates:1; rSTs:1)
- Marinomonas balearica (isolates:1; rSTs:1)
- Marinomonas colpomeniae (isolates:1; rSTs:1)
- Marinomonas communis (isolates:2; rSTs:2)
- Marinomonas flavescens (isolates:1; rSTs:1)
- Marinomonas foliarum (isolates:2; rSTs:2)
- Marinomonas fungiae (isolates:2; rSTs:1)
- Marinomonas gallaica (isolates:3; rSTs:2)
- Marinomonas hwangdonensis (isolates:1; rSTs:1)
- Marinomonas lutimaris (isolates:1; rSTs:1)
- Marinomonas maritima (isolates:1; rSTs:1)
- Marinomonas mediterranea (isolates:4; rSTs:3 tree)
- Marinomonas ostreistagni (isolates:1; rSTs:1)
- Marinomonas piezotolerans (isolates:1; rSTs:1)
- Marinomonas polaris (isolates:1; rSTs:1)
- Marinomonas pollencensis (isolates:1; rSTs:1)
- Marinomonas pontica (isolates:1; rSTs:1)
- Marinomonas posidonica (isolates:1; rSTs:1)
- Marinomonas primoryensis (isolates:2; rSTs:2)
- Marinomonas profundi (isolates:2; rSTs:1)
- Marinomonas profundimaris (isolates:1; rSTs:1)
- Marinomonas rhizomae (isolates:2; rSTs:1)
- Marinomonas sargassi (isolates:1; rSTs:1)
- Marinomonas shanghaiensis (isolates:1; rSTs:1)
- Marinomonas sp. (isolates:14; rSTs:15 tree)
- Marinomonas spartinae (isolates:3; rSTs:3 tree)
- Marinomonas transparens (isolates:1; rSTs:1)
- Marinomonas ushuaiensis (isolates:1; rSTs:1)
- Marinomonas vulgaris (isolates:1; rSTs:1)
- Marinospirillum (isolates:6; rSTs:5 tree)
- Motiliproteus (isolates:3; rSTs:4 tree)
- Neptuniibacter (isolates:7; rSTs:6 tree)
- Neptunomonas (isolates:19; rSTs:16 tree)
- Neptunomonas antarctica (isolates:2; rSTs:1)
- Neptunomonas concharum (isolates:2; rSTs:1)
- Neptunomonas japonica (isolates:2; rSTs:2)
- Neptunomonas marina (isolates:1; rSTs:1)
- Neptunomonas phycophila (isolates:8; rSTs:8 tree)
- Neptunomonas qingdaonensis (isolates:2; rSTs:1)
- Neptunomonas sp. (isolates:2; rSTs:2)
- Nitrincola (isolates:9; rSTs:9 tree)
- Nitrincola alkalilacustris (isolates:1; rSTs:1)
- Nitrincola alkalisediminis (isolates:1; rSTs:1)
- Nitrincola iocasae (isolates:1; rSTs:1)
- Nitrincola lacisaponensis (isolates:1; rSTs:1)
- Nitrincola nitratireducens (isolates:1; rSTs:1)
- Nitrincola schmidtii (isolates:1; rSTs:1)
- Nitrincola sp. (isolates:1; rSTs:1)
- Nitrincola tapanii (isolates:1; rSTs:1)
- Nitrincola tibetensis (isolates:1; rSTs:1)
- Oceanobacter (isolates:7; rSTs:6 tree)
- Oceanospirillum (isolates:8; rSTs:6 tree)
- Oleispira (isolates:1; rSTs:1)
- Oleispira antarctica (isolates:1; rSTs:1)
- Parathalassolituus (isolates:1; rSTs:1)
- Parathalassolituus penaei (isolates:1; rSTs:1)
- Pontibacterium (isolates:2; rSTs:2)
- Thalassolituus (isolates:14; rSTs:12 tree)
- Oleibacter sp. HI0075 (isolates:1; rSTs:1)
- Thalassolituus alkanivorans (isolates:2; rSTs:1)
- Thalassolituus hydrocarboniclasticus (isolates:1; rSTs:1)
- Thalassolituus marinus (isolates:1; rSTs:1)
- Thalassolituus maritimus (isolates:1; rSTs:1)
- Thalassolituus oleivorans (isolates:4; rSTs:4 tree)
- Thalassolituus pacificus (isolates:1; rSTs:1)
- Thalassolituus sp. (isolates:3; rSTs:2)
- Venatoribacter (isolates:2; rSTs:2)
- Venatoribacter cucullus (isolates:2; rSTs:2)
- Oleiphilaceae (isolates:1; rSTs:1)
- Pleioneaceae (isolates:4; rSTs:4 tree)
- Saccharospirillaceae (isolates:13; rSTs:11 tree)
- Zooshikellaceae (isolates:9; rSTs:7 tree)
- Orbales (isolates:157; rSTs:116 tree)
- Orbaceae (isolates:157; rSTs:116 tree)
- Candidatus Schmidhempelia (isolates:1; rSTs:1)
- Candidatus Schmidhempelia bombi (isolates:1; rSTs:1)
- Frischella (isolates:5; rSTs:4 tree)
- Gilliamella (isolates:149; rSTs:109 tree)
- Gilliamella apicola (isolates:34; rSTs:13 tree)
- Gilliamella apis (isolates:24; rSTs:13 tree)
- Gilliamella bombi (isolates:1; rSTs:1)
- Gilliamella bombicola (isolates:1; rSTs:1)
- Gilliamella intestini (isolates:1; rSTs:1)
- Gilliamella mensalis (isolates:1; rSTs:1)
- Gilliamella sp. (isolates:87; rSTs:79 tree)
- Orbus (isolates:1; rSTs:1)
- Orbus hercynius (isolates:1; rSTs:1)
- Zophobihabitans (isolates:1; rSTs:1)
- Zophobihabitans entericus (isolates:1; rSTs:1)
- Candidatus Schmidhempelia (isolates:1; rSTs:1)
- Orbaceae (isolates:157; rSTs:116 tree)
- Pasteurellales (isolates:10268; rSTs:3788)
- Pasteurellaceae (isolates:10265; rSTs:3786)
- Actinobacillus (isolates:328; rSTs:125 tree)
- Actinobacillus arthritidis (isolates:1; rSTs:1)
- Actinobacillus capsulatus (isolates:1; rSTs:1)
- Actinobacillus delphinicola (isolates:2; rSTs:2)
- Actinobacillus equuli (isolates:27; rSTs:24 tree)
- Actinobacillus lignieresii (isolates:3; rSTs:3 tree)
- Actinobacillus minor (isolates:1; rSTs:1)
- Actinobacillus pleuropneumoniae (isolates:267; rSTs:74 tree)
- Actinobacillus porcinus (isolates:2; rSTs:1)
- Actinobacillus porcitonsillarum (isolates:1; rSTs:1)
- Actinobacillus seminis (isolates:2; rSTs:1)
- Actinobacillus sp. (isolates:1; rSTs:3 tree)
- Actinobacillus succinogenes (isolates:2; rSTs:2)
- Actinobacillus suis (isolates:14; rSTs:7 tree)
- Actinobacillus ureae (isolates:3; rSTs:3 tree)
- Actinobacillus vicugnae (isolates:1; rSTs:1)
- Aggregatibacter (isolates:229; rSTs:162 tree)
- Avibacterium (isolates:100; rSTs:27 tree)
- Basfia (isolates:3; rSTs:2)
- Bibersteinia (isolates:8; rSTs:6 tree)
- Bisgaardia (isolates:2; rSTs:1)
- Bisgaardia hudsonensis (isolates:2; rSTs:1)
- Canicola (isolates:5; rSTs:3 tree)
- Caviibacterium (isolates:1; rSTs:1)
- Caviibacterium pharyngocola (isolates:1; rSTs:1)
- Chelonobacter (isolates:2; rSTs:2)
- Chelonobacter oris (isolates:2; rSTs:2)
- Conservatibacter (isolates:1; rSTs:1)
- Conservatibacter flavescens (isolates:1; rSTs:1)
- Cricetibacter (isolates:1; rSTs:1)
- Cricetibacter osteomyelitidis (isolates:1; rSTs:1)
- Exercitatus (isolates:15; rSTs:13)
- Exercitatus varius (isolates:15; rSTs:13)
- Frederiksenia (isolates:2; rSTs:1)
- Frederiksenia canicola (isolates:2; rSTs:1)
- Gallibacterium (isolates:96; rSTs:59 tree)
- Gallibacterium anatis (isolates:84; rSTs:47 tree)
- Gallibacterium genomosp. 1 (isolates:3; rSTs:3 tree)
- Gallibacterium genomosp. 2 (isolates:1; rSTs:1)
- Gallibacterium genomosp. 3 (isolates:3; rSTs:3 tree)
- Gallibacterium salpingitidis (isolates:4; rSTs:4 tree)
- Gallibacterium sp. (isolates:1; rSTs:1 tree)
- Glaesserella (isolates:676; rSTs:454 tree)
- Haemophilus (isolates:5640; rSTs:2320)
- Haemophilus haemolyticus (isolates:49; rSTs:60 tree)
- Haemophilus influenzae (isolates:5449; rSTs:2115)
- Haemophilus massiliensis (isolates:1; rSTs:1)
- Haemophilus paracuniculus (isolates:1; rSTs:1)
- Haemophilus parahaemolyticus (isolates:9; rSTs:7 tree)
- Haemophilus parainfluenzae (isolates:60; rSTs:68 tree)
- Haemophilus paraphrohaemolyticus (isolates:4; rSTs:2)
- Haemophilus pittmaniae (isolates:2; rSTs:2)
- Haemophilus quentini (isolates:3; rSTs:1)
- Haemophilus seminalis (isolates:4; rSTs:4 tree)
- Haemophilus sp. (isolates:21; rSTs:37 tree)
- Haemophilus sputorum (isolates:6; rSTs:5 tree)
- [Haemophilus] ducreyi (isolates:31; rSTs:17 tree)
- Histophilus (isolates:65; rSTs:19 tree)
- Lonepinella (isolates:4; rSTs:2)
- Lonepinella koalarum (isolates:4; rSTs:2)
- Mannheimia (isolates:1761; rSTs:130 tree)
- Mannheimia bovis (isolates:2; rSTs:2)
- Mannheimia cairinae (isolates:2; rSTs:1)
- Mannheimia granulomatis (isolates:6; rSTs:5 tree)
- Mannheimia haemolytica (isolates:1730; rSTs:101 tree)
- Mannheimia pernigra (isolates:4; rSTs:4 tree)
- Mannheimia sp. (isolates:10; rSTs:10 tree)
- Mannheimia varigena (isolates:7; rSTs:7 tree)
- Mergibacter (isolates:6; rSTs:4 tree)
- Mesocricetibacter (isolates:1; rSTs:1)
- Mesocricetibacter intestinalis (isolates:1; rSTs:1)
- Muribacter (isolates:4; rSTs:2)
- Muribacter muris (isolates:4; rSTs:2)
- Necropsobacter (isolates:3; rSTs:2)
- Nicoletella (isolates:2; rSTs:1)
- Nicoletella semolina (isolates:2; rSTs:1)
- Otariodibacter (isolates:2; rSTs:1)
- Otariodibacter oris (isolates:2; rSTs:1)
- Pasteurella (isolates:1232; rSTs:402 tree)
- Pasteurella atlantica (isolates:75; rSTs:7 tree)
- Pasteurella bettyae (isolates:2; rSTs:1)
- Pasteurella canis (isolates:9; rSTs:9 tree)
- Pasteurella dagmatis (isolates:2; rSTs:1)
- Pasteurella langaaensis (isolates:1; rSTs:1)
- Pasteurella multocida (isolates:1124; rSTs:375 tree)
- Pasteurella oralis (isolates:1; rSTs:1)
- Pasteurella skyensis (isolates:14; rSTs:6 tree)
- Pasteurella sp. (isolates:1)
- Pasteurella testudinis (isolates:3; rSTs:1)
- Phocoenobacter (isolates:2; rSTs:1)
- Phocoenobacter uteri (isolates:2; rSTs:1)
- Rodentibacter (isolates:36; rSTs:25 tree)
- Rodentibacter genomosp. 1 (isolates:1; rSTs:1)
- Rodentibacter genomosp. 2 (isolates:1; rSTs:1)
- Rodentibacter haemolyticus (isolates:1; rSTs:1)
- Rodentibacter heidelbergensis (isolates:1; rSTs:1)
- Rodentibacter mrazii (isolates:1; rSTs:1)
- Rodentibacter myodis (isolates:1; rSTs:1)
- Rodentibacter pneumotropicus (isolates:19; rSTs:8 tree)
- Rodentibacter rarus (isolates:2; rSTs:2)
- Rodentibacter ratti (isolates:4; rSTs:4 tree)
- Rodentibacter sp. (isolates:2; rSTs:3 tree)
- Rodentibacter trehalosifermentans (isolates:3; rSTs:2)
- Spirabiliibacterium (isolates:3; rSTs:3 tree)
- Testudinibacter (isolates:9; rSTs:3 tree)
- Ursidibacter (isolates:15; rSTs:3 tree)
- Vespertiliibacter (isolates:2; rSTs:1)
- Vespertiliibacter pulmonis (isolates:2; rSTs:1)
- Volucribacter (isolates:2; rSTs:2)
- Actinobacillus (isolates:328; rSTs:125 tree)
- Psittacicellaceae (isolates:3; rSTs:2)
- Pasteurellaceae (isolates:10265; rSTs:3786)
- Pseudomonadales (isolates:29549; rSTs:8176)
- Ketobacteraceae (isolates:1; rSTs:1)
- Marinobacteraceae (isolates:216; rSTs:185 tree)
- Mangrovitalea (isolates:1; rSTs:1)
- Mangrovitalea sediminis (isolates:1; rSTs:1)
- Marinobacter (isolates:213; rSTs:182 tree)
- Marinobacter adhaerens (isolates:1; rSTs:1)
- Marinobacter alexandrii (isolates:2; rSTs:2)
- Marinobacter algicola (isolates:1; rSTs:1)
- Marinobacter antarcticus (isolates:1; rSTs:1)
- Marinobacter arenosus (isolates:1; rSTs:1)
- Marinobacter aromaticivorans (isolates:1; rSTs:1)
- Marinobacter bohaiensis (isolates:1; rSTs:1)
- Marinobacter bryozoorum (isolates:1; rSTs:1)
- Marinobacter caseinilyticus (isolates:1; rSTs:1)
- Marinobacter changyiensis (isolates:1; rSTs:1)
- Marinobacter confluentis (isolates:2; rSTs:1)
- Marinobacter daepoensis (isolates:4; rSTs:3 tree)
- Marinobacter daqiaonensis (isolates:2; rSTs:1)
- Marinobacter denitrificans (isolates:1; rSTs:1)
- Marinobacter excellens (isolates:2; rSTs:1)
- Marinobacter flavimaris (isolates:2; rSTs:1)
- Marinobacter fonticola (isolates:1; rSTs:1)
- Marinobacter fuscus (isolates:1; rSTs:1)
- Marinobacter gelidimuriae (isolates:1; rSTs:1)
- Marinobacter goseongensis (isolates:1; rSTs:1)
- Marinobacter gudaonensis (isolates:1; rSTs:1)
- Marinobacter guineae (isolates:1; rSTs:1)
- Marinobacter halodurans (isolates:1; rSTs:1)
- Marinobacter halophilus (isolates:2; rSTs:2)
- Marinobacter halotolerans (isolates:1; rSTs:1)
- Marinobacter iranensis (isolates:1; rSTs:1)
- Marinobacter koreensis (isolates:1; rSTs:1)
- Marinobacter lipolyticus (isolates:1; rSTs:1)
- Marinobacter litoralis (isolates:2; rSTs:2)
- Marinobacter lutaoensis (isolates:2; rSTs:2)
- Marinobacter manganoxydans (isolates:1; rSTs:1)
- Marinobacter mangrovi (isolates:1; rSTs:1)
- Marinobacter maritimus (isolates:1; rSTs:1)
- Marinobacter maroccanus (isolates:1; rSTs:1)
- Marinobacter mobilis (isolates:1; rSTs:1)
- Marinobacter nanhaiticus (isolates:1; rSTs:1)
- Marinobacter nauticus (isolates:24; rSTs:18 tree)
- Marinobacter nitratireducens (isolates:1; rSTs:1)
- Marinobacter orientalis (isolates:2; rSTs:1)
- Marinobacter oulmenensis (isolates:1; rSTs:1)
- Marinobacter panjinensis (isolates:2; rSTs:1)
- Marinobacter pelagius (isolates:2; rSTs:3 tree)
- Marinobacter persicus (isolates:5; rSTs:2)
- Marinobacter piscensis (isolates:1; rSTs:1)
- Marinobacter profundi (isolates:1; rSTs:1)
- Marinobacter psychrophilus (isolates:1; rSTs:1)
- Marinobacter salarius (isolates:14; rSTs:13 tree)
- Marinobacter salexigens (isolates:2; rSTs:2)
- Marinobacter salicampi (isolates:1; rSTs:1)
- Marinobacter salinexigens (isolates:1; rSTs:1)
- Marinobacter salinisoli (isolates:1)
- Marinobacter salinus (isolates:1; rSTs:1)
- Marinobacter salsuginis (isolates:1; rSTs:1)
- Marinobacter santoriniensis (isolates:1; rSTs:1)
- Marinobacter sediminum (isolates:1; rSTs:1)
- Marinobacter segnicrescens (isolates:1; rSTs:1)
- Marinobacter shengliensis (isolates:4; rSTs:4 tree)
- Marinobacter similis (isolates:1; rSTs:1)
- Marinobacter sp. (isolates:89; rSTs:76 tree)
- Marinobacter suadae (isolates:1)
- Marinobacter subterrani (isolates:1; rSTs:1)
- Marinobacter vinifirmus (isolates:1; rSTs:1)
- Marinobacter vulgaris (isolates:1; rSTs:1)
- Marinobacter xestospongiae (isolates:2; rSTs:2)
- Marinobacter zhanjiangensis (isolates:1; rSTs:1)
- Marinobacter zhejiangensis (isolates:1; rSTs:1)
- Tamilnaduibacter (isolates:2; rSTs:2)
- Tamilnaduibacter salinus (isolates:2; rSTs:2)
- Mangrovitalea (isolates:1; rSTs:1)
- Perlucidibacaceae (isolates:3; rSTs:3 tree)
- Pseudohongiellaceae (isolates:7; rSTs:5 tree)
- Pseudomonadaceae (isolates:29321; rSTs:7981)
- Atopomonas (isolates:3; rSTs:3 tree)
- Azomonas (isolates:2; rSTs:2)
- Azotobacter (isolates:24; rSTs:17 tree)
- Denitrificimonas (isolates:3; rSTs:3 tree)
- Entomomonas (isolates:3; rSTs:3 tree)
- Halopseudomonas (isolates:32; rSTs:27 tree)
- Halopseudomonas aestusnigri (isolates:6; rSTs:5 tree)
- Halopseudomonas bauzanensis (isolates:3; rSTs:2)
- Halopseudomonas formosensis (isolates:2; rSTs:2)
- Halopseudomonas gallaeciensis (isolates:1; rSTs:1)
- Halopseudomonas laoshanensis (isolates:1; rSTs:1)
- Halopseudomonas litoralis (isolates:1; rSTs:1)
- Halopseudomonas maritima (isolates:1; rSTs:1)
- Halopseudomonas nanhaiensis (isolates:1; rSTs:1)
- Halopseudomonas oceani (isolates:2; rSTs:2)
- Halopseudomonas pachastrellae (isolates:2; rSTs:1)
- Halopseudomonas pelagia (isolates:1; rSTs:1)
- Halopseudomonas pertucinogena (isolates:1; rSTs:1)
- Halopseudomonas phragmitis (isolates:1; rSTs:1)
- Halopseudomonas sabulinigri (isolates:1; rSTs:1)
- Halopseudomonas salegens (isolates:1; rSTs:1)
- Halopseudomonas salina (isolates:2; rSTs:1)
- Halopseudomonas sp. (isolates:2; rSTs:1 tree)
- Halopseudomonas xiamenensis (isolates:1; rSTs:1)
- Halopseudomonas xinjiangensis (isolates:1; rSTs:1)
- Halopseudomonas yangmingensis (isolates:1; rSTs:1)
- Permianibacter (isolates:3; rSTs:3 tree)
- Pseudomonas (isolates:29043; rSTs:7753)
- Candidatus Pseudomonas adelgestsugas (isolates:1; rSTs:1)
- Pseudomonas abietaniphila (isolates:3; rSTs:2)
- Pseudomonas abyssi (isolates:1; rSTs:1)
- Pseudomonas aegrilactucae (isolates:1; rSTs:1)
- Pseudomonas aeruginosa (isolates:22781; rSTs:4224)
- Pseudomonas aestuarii (isolates:1; rSTs:1)
- Pseudomonas agarici (isolates:5; rSTs:3 tree)
- Pseudomonas agronomica (isolates:1; rSTs:1)
- Pseudomonas akapageensis (isolates:1; rSTs:1)
- Pseudomonas alcaligenes (isolates:18; rSTs:9 tree)
- Pseudomonas alcaliphila (isolates:4; rSTs:2)
- Pseudomonas alkylphenolica (isolates:3; rSTs:3 tree)
- Pseudomonas allii (isolates:3; rSTs:2)
- Pseudomonas alliivorans (isolates:5; rSTs:5 tree)
- Pseudomonas allokribbensis (isolates:1; rSTs:1)
- Pseudomonas alloputida (isolates:15; rSTs:4 tree)
- Pseudomonas alvandae (isolates:1; rSTs:1)
- Pseudomonas amygdali (isolates:20; rSTs:5 tree)
- Pseudomonas anatoliensis (isolates:1; rSTs:1)
- Pseudomonas anguilliseptica (isolates:2; rSTs:2)
- Pseudomonas antarctica (isolates:3; rSTs:1)
- Pseudomonas anuradhapurensis (isolates:1; rSTs:1)
- Pseudomonas aphyarum (isolates:3; rSTs:2)
- Pseudomonas arcuscaelestis (isolates:3; rSTs:3 tree)
- Pseudomonas argentinensis (isolates:3; rSTs:2)
- Pseudomonas aromaticivorans (isolates:1; rSTs:1)
- Pseudomonas arsenicoxydans (isolates:2; rSTs:2)
- Pseudomonas asgharzadehiana (isolates:1; rSTs:1)
- Pseudomonas asiatica (isolates:13; rSTs:3 tree)
- Pseudomonas asplenii (isolates:1; rSTs:1)
- Pseudomonas asturiensis (isolates:1; rSTs:1)
- Pseudomonas asuensis (isolates:1; rSTs:1)
- Pseudomonas atacamensis (isolates:6; rSTs:6 tree)
- Pseudomonas atagonensis (isolates:1; rSTs:1)
- Pseudomonas avellanae (isolates:10; rSTs:4 tree)
- Pseudomonas aylmerensis (isolates:2; rSTs:1)
- Pseudomonas azadiae (isolates:1; rSTs:1)
- Pseudomonas azerbaijanoccidentalis (isolates:2; rSTs:2)
- Pseudomonas azerbaijanorientalis (isolates:1; rSTs:1)
- Pseudomonas azotoformans (isolates:5; rSTs:1)
- Pseudomonas baetica (isolates:4; rSTs:3 tree)
- Pseudomonas baltica (isolates:1; rSTs:1)
- Pseudomonas bananamidigenes (isolates:1; rSTs:1)
- Pseudomonas batumici (isolates:2; rSTs:2)
- Pseudomonas benzenivorans (isolates:1; rSTs:1)
- Pseudomonas benzopyrenica (isolates:1; rSTs:1)
- Pseudomonas berkeleyensis (isolates:2; rSTs:1)
- Pseudomonas bijieensis (isolates:3; rSTs:3 tree)
- Pseudomonas boanensis (isolates:1; rSTs:1)
- Pseudomonas bohemica (isolates:1; rSTs:1)
- Pseudomonas borbori (isolates:1; rSTs:1)
- Pseudomonas botevensis (isolates:1; rSTs:1)
- Pseudomonas brassicacearum (isolates:21; rSTs:16 tree)
- Pseudomonas brassicae (isolates:2; rSTs:1)
- Pseudomonas brenneri (isolates:6; rSTs:3 tree)
- Pseudomonas bubulae (isolates:6; rSTs:6 tree)
- Pseudomonas californiensis (isolates:2; rSTs:1)
- Pseudomonas campi (isolates:1; rSTs:1)
- Pseudomonas canadensis (isolates:8; rSTs:8 tree)
- Pseudomonas canavaninivorans (isolates:3; rSTs:3)
- Pseudomonas cannabina (isolates:11; rSTs:5 tree)
- Pseudomonas capeferrum (isolates:3; rSTs:2)
- Pseudomonas capsici (isolates:12; rSTs:6 tree)
- Pseudomonas carbonaria (isolates:1; rSTs:1)
- Pseudomonas caricapapayae (isolates:5; rSTs:3 tree)
- Pseudomonas carnis (isolates:35; rSTs:21 tree)
- Pseudomonas caspiana (isolates:1; rSTs:1)
- Pseudomonas cavernae (isolates:1; rSTs:1)
- Pseudomonas cavernicola (isolates:1; rSTs:1)
- Pseudomonas cedrina (isolates:4; rSTs:2)
- Pseudomonas cerasi (isolates:4; rSTs:3 tree)
- Pseudomonas ceruminis (isolates:2; rSTs:1)
- Pseudomonas chaetocerotis (isolates:1; rSTs:1)
- Pseudomonas chengduensis (isolates:21; rSTs:18 tree)
- Pseudomonas chlororaphis (isolates:135; rSTs:75 tree)
- Pseudomonas cichorii (isolates:35; rSTs:30 tree)
- Pseudomonas citri (isolates:1; rSTs:1)
- Pseudomonas citronellolis (isolates:16; rSTs:8 tree)
- Pseudomonas coleopterorum (isolates:7; rSTs:6 tree)
- Pseudomonas composti (isolates:3; rSTs:3 tree)
- Pseudomonas congelans (isolates:11; rSTs:11 tree)
- Pseudomonas coronafaciens (isolates:60; rSTs:21 tree)
- Pseudomonas corrugata (isolates:16; rSTs:13 tree)
- Pseudomonas costantinii (isolates:4; rSTs:3 tree)
- Pseudomonas cremoricolorata (isolates:2; rSTs:2)
- Pseudomonas cremoris (isolates:2; rSTs:1)
- Pseudomonas crudilactis (isolates:1; rSTs:1)
- Pseudomonas cuatrocienegasensis (isolates:1; rSTs:1)
- Pseudomonas cucumis (isolates:2; rSTs:2)
- Pseudomonas cyclaminis (isolates:2; rSTs:1)
- Pseudomonas daroniae (isolates:3; rSTs:2)
- Pseudomonas deceptionensis (isolates:2; rSTs:1)
- Pseudomonas defluvii (isolates:1; rSTs:1)
- Pseudomonas delhiensis (isolates:2; rSTs:1)
- Pseudomonas donghuensis (isolates:9; rSTs:7 tree)
- Pseudomonas dryadis (isolates:2; rSTs:2)
- Pseudomonas duriflava (isolates:1; rSTs:1)
- Pseudomonas edaphica (isolates:5; rSTs:3 tree)
- Pseudomonas ekonensis (isolates:1; rSTs:1)
- Pseudomonas emilianonis (isolates:1; rSTs:1)
- Pseudomonas endophytica (isolates:1; rSTs:1)
- Pseudomonas entomophila (isolates:6; rSTs:5 tree)
- Pseudomonas eucalypticola (isolates:1; rSTs:1)
- Pseudomonas extremaustralis (isolates:10; rSTs:7 tree)
- Pseudomonas extremorientalis (isolates:6; rSTs:3 tree)
- Pseudomonas fakonensis (isolates:1; rSTs:1)
- Pseudomonas farris (isolates:1; rSTs:1)
- Pseudomonas farsensis (isolates:1; rSTs:1)
- Pseudomonas faucium (isolates:3; rSTs:2)
- Pseudomonas ficuserectae (isolates:4; rSTs:3 tree)
- Pseudomonas fildesensis (isolates:1; rSTs:1)
- Pseudomonas fitomaticsae (isolates:1; rSTs:1)
- Pseudomonas flavescens (isolates:2; rSTs:2)
- Pseudomonas flexibilis (isolates:5; rSTs:4 tree)
- Pseudomonas floridensis (isolates:1; rSTs:1)
- Pseudomonas fluorescens (isolates:15; rSTs:7 tree)
- Pseudomonas fluvialis (isolates:2; rSTs:1)
- Pseudomonas folii (isolates:1; rSTs:1)
- Pseudomonas fontis (isolates:2; rSTs:1)
- Pseudomonas fragi (isolates:30; rSTs:20 tree)
- Pseudomonas frederiksbergensis (isolates:2; rSTs:2)
- Pseudomonas fulva (isolates:80; rSTs:26 tree)
- Pseudomonas furukawaii (isolates:3; rSTs:2)
- Pseudomonas fuscovaginae (isolates:7; rSTs:2)
- Pseudomonas germanica (isolates:2; rSTs:2)
- Pseudomonas gessardii (isolates:13; rSTs:7 tree)
- Pseudomonas gingeri (isolates:24; rSTs:11 tree)
- Pseudomonas glycinae (isolates:7; rSTs:6 tree)
- Pseudomonas gozinkensis (isolates:1; rSTs:1)
- Pseudomonas graminis (isolates:5; rSTs:5 tree)
- Pseudomonas granadensis (isolates:8; rSTs:4 tree)
- Pseudomonas gregormendelii (isolates:1; rSTs:1)
- Pseudomonas grimontii (isolates:3; rSTs:3 tree)
- Pseudomonas guangdongensis (isolates:1; rSTs:1)
- Pseudomonas guariconensis (isolates:25; rSTs:16 tree)
- Pseudomonas guguanensis (isolates:3; rSTs:3 tree)
- Pseudomonas guineae (isolates:1; rSTs:1)
- Pseudomonas guryensis (isolates:1; rSTs:1)
- Pseudomonas haemolytica (isolates:6; rSTs:2)
- Pseudomonas hamedanensis (isolates:1; rSTs:1)
- Pseudomonas helleri (isolates:14; rSTs:12 tree)
- Pseudomonas helmanticensis (isolates:1; rSTs:1)
- Pseudomonas hormoni (isolates:1; rSTs:1)
- Pseudomonas huaxiensis (isolates:1; rSTs:1)
- Pseudomonas humi (isolates:1; rSTs:1)
- Pseudomonas hunanensis (isolates:3; rSTs:2)
- Pseudomonas hydrolytica (isolates:2; rSTs:2)
- Pseudomonas hygromyciniae (isolates:2; rSTs:2)
- Pseudomonas idahonensis (isolates:2; rSTs:2)
- Pseudomonas indica (isolates:3; rSTs:2)
- Pseudomonas indoloxydans (isolates:1; rSTs:1)
- Pseudomonas inefficax (isolates:3; rSTs:2)
- Pseudomonas insulae (isolates:1; rSTs:1)
- Pseudomonas iranensis (isolates:1; rSTs:1)
- Pseudomonas iridis (isolates:2; rSTs:2)
- Pseudomonas izuensis (isolates:2; rSTs:2)
- Pseudomonas japonica (isolates:2; rSTs:1)
- Pseudomonas jessenii (isolates:2; rSTs:1)
- Pseudomonas jilinensis (isolates:1; rSTs:1)
- Pseudomonas jinjuensis (isolates:2; rSTs:1)
- Pseudomonas juntendi (isolates:46; rSTs:29 tree)
- Pseudomonas kairouanensis (isolates:1; rSTs:1)
- Pseudomonas karstica (isolates:1; rSTs:1)
- Pseudomonas kermanshahensis (isolates:3; rSTs:3 tree)
- Pseudomonas khavaziana (isolates:1; rSTs:1)
- Pseudomonas khazarica (isolates:3; rSTs:3)
- Pseudomonas khorasanensis (isolates:1; rSTs:1)
- Pseudomonas kielensis (isolates:3; rSTs:3 tree)
- Pseudomonas kilonensis (isolates:3; rSTs:3 tree)
- Pseudomonas kitaguniensis (isolates:2; rSTs:2)
- Pseudomonas knackmussii (isolates:2; rSTs:2)
- Pseudomonas koreensis (isolates:8; rSTs:5 tree)
- Pseudomonas kribbensis (isolates:2; rSTs:2)
- Pseudomonas kurunegalensis (isolates:12; rSTs:6 tree)
- Pseudomonas kuykendallii (isolates:2; rSTs:1)
- Pseudomonas lactis (isolates:27; rSTs:14 tree)
- Pseudomonas lactucae (isolates:3; rSTs:2)
- Pseudomonas lalkuanensis (isolates:2; rSTs:2)
- Pseudomonas lalucatii (isolates:1; rSTs:1)
- Pseudomonas laurentiana (isolates:2; rSTs:2)
- Pseudomonas laurylsulfatiphila (isolates:2; rSTs:2)
- Pseudomonas laurylsulfativorans (isolates:2; rSTs:2)
- Pseudomonas leptonychotis (isolates:1; rSTs:1)
- Pseudomonas libanensis (isolates:2; rSTs:1)
- Pseudomonas lijiangensis (isolates:3; rSTs:1)
- Pseudomonas lini (isolates:5; rSTs:3 tree)
- Pseudomonas linyingensis (isolates:1; rSTs:1)
- Pseudomonas lopnurensis (isolates:1; rSTs:1)
- Pseudomonas lundensis (isolates:40; rSTs:30 tree)
- Pseudomonas lurida (isolates:22; rSTs:13 tree)
- Pseudomonas lutea (isolates:1; rSTs:1)
- Pseudomonas luteola (isolates:7; rSTs:4 tree)
- Pseudomonas mandelii (isolates:9; rSTs:7 tree)
- Pseudomonas mangiferae (isolates:1; rSTs:1)
- Pseudomonas mangrovi (isolates:1; rSTs:1)
- Pseudomonas marginalis (isolates:7; rSTs:3 tree)
- Pseudomonas marianensis (isolates:1; rSTs:1)
- Pseudomonas marincola (isolates:3; rSTs:3 tree)
- Pseudomonas marvdashtae (isolates:1; rSTs:1)
- Pseudomonas massiliensis (isolates:2; rSTs:1)
- Pseudomonas matsuisoli (isolates:1; rSTs:1)
- Pseudomonas maumuensis (isolates:1; rSTs:1)
- Pseudomonas mediterranea (isolates:11; rSTs:7 tree)
- Pseudomonas meliae (isolates:2; rSTs:2)
- Pseudomonas mendocina (isolates:14; rSTs:11 tree)
- Pseudomonas mercuritolerans (isolates:1; rSTs:1)
- Pseudomonas migulae (isolates:2; rSTs:1)
- Pseudomonas mohnii (isolates:2; rSTs:1)
- Pseudomonas monsensis (isolates:4; rSTs:3)
- Pseudomonas monteilii (isolates:32; rSTs:17 tree)
- Pseudomonas moorei (isolates:4; rSTs:3 tree)
- Pseudomonas moraviensis (isolates:3; rSTs:3 tree)
- Pseudomonas morbosilactucae (isolates:2; rSTs:2)
- Pseudomonas mosselii (isolates:45; rSTs:29 tree)
- Pseudomonas mucidolens (isolates:4; rSTs:3 tree)
- Pseudomonas mucoides (isolates:1; rSTs:1)
- Pseudomonas multiresinivorans (isolates:1; rSTs:1)
- Pseudomonas muyukensis (isolates:1; rSTs:1)
- Pseudomonas nabeulensis (isolates:1; rSTs:1)
- Pseudomonas neuropathica (isolates:1; rSTs:1)
- Pseudomonas neustonica (isolates:1; rSTs:1)
- Pseudomonas nicosulfuronedens (isolates:4; rSTs:1)
- Pseudomonas nitritireducens (isolates:1; rSTs:1)
- Pseudomonas nitroreducens (isolates:10; rSTs:6 tree)
- Pseudomonas nunensis (isolates:4; rSTs:2)
- Pseudomonas ogarae (isolates:3; rSTs:2)
- Pseudomonas oleovorans (isolates:20; rSTs:10 tree)
- Pseudomonas oligotrophica (isolates:1; rSTs:1)
- Pseudomonas orientalis (isolates:12; rSTs:11 tree)
- Pseudomonas oryzae (isolates:1; rSTs:1)
- Pseudomonas oryzagri (isolates:1; rSTs:1)
- Pseudomonas oryzicola (isolates:1; rSTs:1)
- Pseudomonas oryzihabitans (isolates:10; rSTs:9 tree)
- Pseudomonas oryziphila (isolates:2; rSTs:2)
- Pseudomonas otitidis (isolates:36; rSTs:28 tree)
- Pseudomonas ovata (isolates:1; rSTs:1)
- Pseudomonas palleroniana (isolates:8; rSTs:6 tree)
- Pseudomonas palmensis (isolates:1; rSTs:1)
- Pseudomonas panipatensis (isolates:2; rSTs:1)
- Pseudomonas paracarnis (isolates:14; rSTs:8 tree)
- Pseudomonas paraeruginosa (isolates:22; rSTs:15 tree)
- Pseudomonas parafulva (isolates:2; rSTs:1)
- Pseudomonas paraglycinae (isolates:1; rSTs:1)
- Pseudomonas parakoreensis (isolates:1; rSTs:1)
- Pseudomonas paralactis (isolates:3; rSTs:3 tree)
- Pseudomonas paralcaligenes (isolates:1; rSTs:1)
- Pseudomonas parasichuanensis (isolates:1; rSTs:1)
- Pseudomonas paraversuta (isolates:3; rSTs:2)
- Pseudomonas peli (isolates:4; rSTs:3 tree)
- Pseudomonas peradeniyensis (isolates:3; rSTs:3 tree)
- Pseudomonas pergaminensis (isolates:1; rSTs:1)
- Pseudomonas petrae (isolates:4; rSTs:4 tree)
- Pseudomonas petroselini (isolates:4; rSTs:1)
- Pseudomonas pharmacofabricae (isolates:1; rSTs:1)
- Pseudomonas pharyngis (isolates:1; rSTs:1)
- Pseudomonas pisciculturae (isolates:1; rSTs:1)
- Pseudomonas piscis (isolates:4; rSTs:3 tree)
- Pseudomonas plecoglossicida (isolates:7; rSTs:3 tree)
- Pseudomonas poae (isolates:8; rSTs:4 tree)
- Pseudomonas pohangensis (isolates:1; rSTs:1)
- Pseudomonas profundi (isolates:1; rSTs:1)
- Pseudomonas promysalinigenes (isolates:2; rSTs:2)
- Pseudomonas prosekii (isolates:6; rSTs:5 tree)
- Pseudomonas protegens (isolates:67; rSTs:36 tree)
- Pseudomonas proteolytica (isolates:15; rSTs:12 tree)
- Pseudomonas pseudonitroreducens (isolates:3; rSTs:2)
- Pseudomonas psychrophila (isolates:8; rSTs:5 tree)
- Pseudomonas psychrotolerans (isolates:7; rSTs:5 tree)
- Pseudomonas punonensis (isolates:1; rSTs:1)
- Pseudomonas putida (isolates:87; rSTs:50 tree)
- Pseudomonas qingdaonensis (isolates:8; rSTs:8 tree)
- Pseudomonas quasicaspiana (isolates:3; rSTs:3 tree)
- Pseudomonas quebecensis (isolates:4; rSTs:1)
- Pseudomonas quercus (isolates:1; rSTs:1)
- Pseudomonas reactans (isolates:5; rSTs:4 tree)
- Pseudomonas reidholzensis (isolates:1; rSTs:1)
- Pseudomonas reinekei (isolates:3; rSTs:1)
- Pseudomonas resinovorans (isolates:2; rSTs:2)
- Pseudomonas rhizophila (isolates:1; rSTs:1)
- Pseudomonas rhizoryzae (isolates:2; rSTs:1)
- Pseudomonas rhizosphaerae (isolates:2; rSTs:2)
- Pseudomonas rhodesiae (isolates:24; rSTs:19 tree)
- Pseudomonas rubra (isolates:3; rSTs:1)
- Pseudomonas rustica (isolates:2; rSTs:2)
- Pseudomonas sagittaria (isolates:1; rSTs:1)
- Pseudomonas saliphila (isolates:1; rSTs:1)
- Pseudomonas salmasensis (isolates:2; rSTs:2)
- Pseudomonas salomonii (isolates:5; rSTs:4 tree)
- Pseudomonas saponiphila (isolates:2; rSTs:2)
- Pseudomonas saudimassiliensis (isolates:1; rSTs:1)
- Pseudomonas saudiphocaensis (isolates:3; rSTs:3 tree)
- Pseudomonas savastanoi (isolates:32; rSTs:19 tree)
- Pseudomonas saxonica (isolates:3; rSTs:2)
- Pseudomonas schmalbachii (isolates:1; rSTs:1)
- Pseudomonas sediminis (isolates:3; rSTs:3 tree)
- Pseudomonas segetis (isolates:1; rSTs:1)
- Pseudomonas seleniipraecipitans (isolates:2; rSTs:2)
- Pseudomonas serbica (isolates:1; rSTs:1)
- Pseudomonas serboccidentalis (isolates:1; rSTs:1)
- Pseudomonas sessilinigenes (isolates:2; rSTs:1)
- Pseudomonas shahriarae (isolates:8; rSTs:7 tree)
- Pseudomonas shirazensis (isolates:1)
- Pseudomonas shirazica (isolates:7; rSTs:5 tree)
- Pseudomonas sichuanensis (isolates:5; rSTs:2)
- Pseudomonas sihuiensis (isolates:1; rSTs:1)
- Pseudomonas silesiensis (isolates:1; rSTs:1)
- Pseudomonas siliginis (isolates:11; rSTs:10 tree)
- Pseudomonas silvicola (isolates:1)
- Pseudomonas simiae (isolates:27; rSTs:18 tree)
- Pseudomonas sivasensis (isolates:5; rSTs:4 tree)
- Pseudomonas solani (isolates:1; rSTs:1)
- Pseudomonas soli (isolates:11; rSTs:9 tree)
- Pseudomonas songnenensis (isolates:3; rSTs:2)
- Pseudomonas sp. (isolates:2164; rSTs:1789)
- Pseudomonas spelaei (isolates:1; rSTs:1)
- Pseudomonas sputi (isolates:1; rSTs:1)
- Pseudomonas straminea (isolates:2; rSTs:2)
- Pseudomonas subflava (isolates:1; rSTs:1)
- Pseudomonas synxantha (isolates:13; rSTs:7 tree)
- Pseudomonas syringae (isolates:545; rSTs:207 tree)
- Pseudomonas taeanensis (isolates:1; rSTs:1)
- Pseudomonas taetrolens (isolates:4; rSTs:2)
- Pseudomonas taiwanensis (isolates:4; rSTs:4 tree)
- Pseudomonas tehranensis (isolates:1; rSTs:1)
- Pseudomonas tensinigenes (isolates:1; rSTs:1)
- Pseudomonas thermotolerans (isolates:2; rSTs:2)
- Pseudomonas thivervalensis (isolates:4; rSTs:2)
- Pseudomonas tohonis (isolates:9; rSTs:7 tree)
- Pseudomonas tolaasii (isolates:19; rSTs:10 tree)
- Pseudomonas toyotomiensis (isolates:5; rSTs:4 tree)
- Pseudomonas tremae (isolates:6; rSTs:5 tree)
- Pseudomonas triclosanedens (isolates:4)
- Pseudomonas tritici (isolates:1; rSTs:1)
- Pseudomonas triticicola (isolates:1; rSTs:1)
- Pseudomonas triticifolii (isolates:1; rSTs:1)
- Pseudomonas trivialis (isolates:3; rSTs:1)
- Pseudomonas tructae (isolates:1; rSTs:1)
- Pseudomonas tumuqii (isolates:1; rSTs:1)
- Pseudomonas turukhanskensis (isolates:1; rSTs:1)
- Pseudomonas typographi (isolates:3; rSTs:3 tree)
- Pseudomonas ullengensis (isolates:1; rSTs:1)
- Pseudomonas umsongensis (isolates:7; rSTs:6 tree)
- Pseudomonas urethralis (isolates:2; rSTs:1)
- Pseudomonas urmiensis (isolates:1; rSTs:1)
- Pseudomonas uvaldensis (isolates:1; rSTs:1)
- Pseudomonas vancouverensis (isolates:3; rSTs:1)
- Pseudomonas vanderleydeniana (isolates:1; rSTs:1)
- Pseudomonas veronii (isolates:27; rSTs:24 tree)
- Pseudomonas versuta (isolates:3; rSTs:2)
- Pseudomonas viciae (isolates:3; rSTs:3 tree)
- Pseudomonas violetae (isolates:1; rSTs:1)
- Pseudomonas viridiflava (isolates:1421; rSTs:123 tree)
- Pseudomonas vlassakiae (isolates:2; rSTs:2)
- Pseudomonas vranovensis (isolates:1; rSTs:1)
- Pseudomonas wadenswilerensis (isolates:2; rSTs:2)
- Pseudomonas weihenstephanensis (isolates:4; rSTs:4 tree)
- Pseudomonas wenzhouensis (isolates:1; rSTs:1)
- Pseudomonas xantholysinigenes (isolates:1; rSTs:1)
- Pseudomonas xanthosomatis (isolates:1; rSTs:1)
- Pseudomonas xionganensis (isolates:1; rSTs:1)
- Pseudomonas yamanorum (isolates:12; rSTs:12 tree)
- Pseudomonas yangonensis (isolates:3; rSTs:2)
- Pseudomonas zanjanensis (isolates:1; rSTs:1)
- Pseudomonas zarinae (isolates:1; rSTs:1)
- Pseudomonas zeae (isolates:3; rSTs:3 tree)
- Pseudomonas zeshuii (isolates:3; rSTs:3 tree)
- Serpens gallinarum (isolates:1; rSTs:1)
- Stutzerimonas (isolates:196; rSTs:160 tree)
- Stutzerimonas azotifigens (isolates:1; rSTs:1)
- Stutzerimonas balearica (isolates:13; rSTs:10 tree)
- Stutzerimonas chloritidismutans (isolates:3; rSTs:3 tree)
- Stutzerimonas decontaminans (isolates:3; rSTs:1)
- Stutzerimonas degradans (isolates:13; rSTs:11 tree)
- Stutzerimonas frequens (isolates:19; rSTs:14 tree)
- Stutzerimonas kirkiae (isolates:4; rSTs:3 tree)
- Stutzerimonas kunmingensis (isolates:8; rSTs:7 tree)
- Stutzerimonas nitrititolerans (isolates:5; rSTs:5 tree)
- Stutzerimonas nosocomialis (isolates:3; rSTs:3 tree)
- Stutzerimonas sp. (isolates:3; rSTs:8 tree)
- Stutzerimonas stutzeri (isolates:111; rSTs:86 tree)
- Stutzerimonas urumqiensis (isolates:1; rSTs:1)
- Stutzerimonas xanthomarina (isolates:3; rSTs:2)
- Stutzerimonas zhaodongensis (isolates:6; rSTs:5 tree)
- Thiopseudomonas (isolates:12; rSTs:10 tree)
- Ventosimonadaceae (isolates:1; rSTs:1)
- Salinisphaerales (isolates:11; rSTs:10 tree)
- Steroidobacterales (isolates:8; rSTs:8 tree)
- Thiohalobacterales (isolates:4; rSTs:4 tree)
- Thiohalomonadales (isolates:3; rSTs:3 tree)
- Thiohalorhabdales (isolates:2; rSTs:1)
- Thiohalospirales (isolates:1; rSTs:1)
- Thiotrichales (isolates:1471; rSTs:259 tree)
- Fastidiosibacteraceae (isolates:18; rSTs:9 tree)
- Francisellaceae (isolates:1265; rSTs:148 tree)
- Allofrancisella (isolates:7; rSTs:4 tree)
- Francisella (isolates:1257; rSTs:143 tree)
- Francisella adeliensis (isolates:5; rSTs:1)
- Francisella endosymbiont of Amblyomma maculatum (isolates:1; rSTs:1)
- Francisella frigiditurris (isolates:1; rSTs:1)
- Francisella halioticida (isolates:2; rSTs:2)
- Francisella hispaniensis (isolates:4; rSTs:3 tree)
- Francisella marina (isolates:2; rSTs:1)
- Francisella noatunensis (isolates:29; rSTs:5 tree)
- Francisella opportunistica (isolates:3; rSTs:1)
- Francisella orientalis (isolates:55; rSTs:5 tree)
- Francisella persica (isolates:2; rSTs:1)
- Francisella philomiragia (isolates:53; rSTs:16 tree)
- Francisella salimarina (isolates:1; rSTs:1)
- Francisella salina (isolates:1; rSTs:1)
- Francisella sp. (isolates:12; rSTs:9 tree)
- Francisella tularensis (isolates:1085; rSTs:94 tree)
- Francisella uliginis (isolates:1; rSTs:1)
- Pseudofrancisella (isolates:1; rSTs:1)
- Pseudofrancisella aestuarii (isolates:1; rSTs:1)
- Piscirickettsiaceae (isolates:146; rSTs:72 tree)
- Cycloclasticus (isolates:5; rSTs:5 tree)
- Hydrogenovibrio (isolates:13; rSTs:10 tree)
- Methylophaga (isolates:14; rSTs:11 tree)
- Methylophaga aminisulfidivorans (isolates:1; rSTs:1)
- Methylophaga frappieri (isolates:1; rSTs:1)
- Methylophaga lonarensis (isolates:1; rSTs:1)
- Methylophaga marina (isolates:1)
- Methylophaga muralis (isolates:1; rSTs:1)
- Methylophaga nitratireducenticrescens (isolates:2; rSTs:2)
- Methylophaga pinxianii (isolates:2; rSTs:1)
- Methylophaga sp. (isolates:2; rSTs:2)
- Methylophaga sulfidovorans (isolates:1; rSTs:1)
- Methylophaga thiooxydans (isolates:2; rSTs:1)
- Piscirickettsia (isolates:87; rSTs:20 tree)
- Sulfurivirga (isolates:1; rSTs:1)
- Sulfurivirga caldicuralii (isolates:1; rSTs:1)
- Thiomicrorhabdus (isolates:17; rSTs:16 tree)
- Thiomicrorhabdus aquaedulcis (isolates:1; rSTs:1)
- Thiomicrorhabdus arctica (isolates:1; rSTs:1)
- Thiomicrorhabdus cannonii (isolates:1; rSTs:1)
- Thiomicrorhabdus chilensis (isolates:1; rSTs:1)
- Thiomicrorhabdus heinhorstiae (isolates:1; rSTs:1)
- Thiomicrorhabdus immobilis (isolates:1; rSTs:1)
- Thiomicrorhabdus indica (isolates:1; rSTs:1)
- Thiomicrorhabdus lithotrophica (isolates:1; rSTs:1)
- Thiomicrorhabdus marina (isolates:1; rSTs:1)
- Thiomicrorhabdus sediminis (isolates:1; rSTs:1)
- Thiomicrorhabdus sp. (isolates:6; rSTs:5 tree)
- Thiomicrorhabdus xiamenensis (isolates:1; rSTs:1)
- Thiomicrospira (isolates:7; rSTs:7 tree)
- Thiosulfatimonas (isolates:1; rSTs:1)
- Thiosulfatimonas sediminis (isolates:1; rSTs:1)
- Thiosulfativibrio (isolates:1; rSTs:1)
- Thiosulfativibrio zosterae (isolates:1; rSTs:1)
- Thiofilaceae (isolates:1; rSTs:1)
- Thiolinaceae (isolates:1; rSTs:1)
- Thiotrichaceae (isolates:39; rSTs:27 tree)
- Achromatium (isolates:2; rSTs:1)
- Beggiatoa (isolates:3; rSTs:2)
- Cocleimonas (isolates:4; rSTs:2)
- Leucothrix (isolates:3; rSTs:3 tree)
- Marithrix (isolates:6; rSTs:1)
- Candidatus Marithrix sp. (isolates:6; rSTs:1)
- Thiomargarita (isolates:1)
- Candidatus Thiomargarita nelsonii (isolates:1)
- Thioploca (isolates:1; rSTs:1)
- Thioploca ingrica (isolates:1; rSTs:1)
- Thiothrix (isolates:17; rSTs:16 tree)
- Candidatus Thiothrix anitrata (isolates:1; rSTs:1)
- Candidatus Thiothrix sp. (isolates:1; rSTs:1)
- Thiothrix caldifontis (isolates:1; rSTs:1)
- Thiothrix eikelboomii (isolates:1; rSTs:1)
- Thiothrix fructosivorans (isolates:1; rSTs:1)
- Thiothrix lacustris (isolates:3; rSTs:3 tree)
- Thiothrix litoralis (isolates:1; rSTs:1)
- Thiothrix nivea (isolates:1; rSTs:1)
- Thiothrix sp. (isolates:1)
- Thiothrix subterranea (isolates:4; rSTs:4 tree)
- Thiothrix unzii (isolates:1; rSTs:1)
- Thiothrix winogradskyi (isolates:1; rSTs:1)
- Venteria (isolates:2; rSTs:1)
- Candidatus Venteria ishoeyi (isolates:2; rSTs:1)
- Vibrionales (isolates:21712; rSTs:7542)
- Vibrionaceae (isolates:21712; rSTs:7542)
- Aliivibrio (isolates:112; rSTs:74 tree)
- Aliivibrio finisterrensis (isolates:11; rSTs:4 tree)
- Aliivibrio fischeri (isolates:75; rSTs:54 tree)
- Aliivibrio logei (isolates:3; rSTs:2)
- Aliivibrio salmonicida (isolates:2; rSTs:1)
- Aliivibrio sifiae (isolates:3; rSTs:2)
- Aliivibrio sp. (isolates:17; rSTs:10 tree)
- Aliivibrio wodanis (isolates:1; rSTs:1)
- Candidatus Photodesmus (isolates:3; rSTs:3 tree)
- Enterovibrio (isolates:35; rSTs:24 tree)
- Candidatus Enterovibrio escacola (isolates:9; rSTs:3 tree)
- Candidatus Enterovibrio luxaltus (isolates:3; rSTs:2)
- Enterovibrio baiacu (isolates:2; rSTs:1)
- Enterovibrio calviensis (isolates:1; rSTs:1)
- Enterovibrio coralii (isolates:1; rSTs:1)
- Enterovibrio nigricans (isolates:2; rSTs:2)
- Enterovibrio norvegicus (isolates:15; rSTs:12 tree)
- Enterovibrio sp. (isolates:2; rSTs:2)
- Grimontia (isolates:19; rSTs:15 tree)
- Paraphotobacterium (isolates:1; rSTs:1)
- Paraphotobacterium marinum (isolates:1; rSTs:1)
- Photobacterium (isolates:398; rSTs:293 tree)
- Photobacterium alginatilyticum (isolates:1; rSTs:1)
- Photobacterium andalusiense (isolates:1; rSTs:1)
- Photobacterium angustum (isolates:26; rSTs:8 tree)
- Photobacterium aphoticum (isolates:4; rSTs:2)
- Photobacterium aquae (isolates:1; rSTs:1)
- Photobacterium aquimaris (isolates:5; rSTs:2)
- Photobacterium arenosum (isolates:2; rSTs:2)
- Photobacterium atrarenae (isolates:1; rSTs:1)
- Photobacterium carnosum (isolates:21; rSTs:14 tree)
- Photobacterium chitinilyticum (isolates:1; rSTs:1)
- Photobacterium damselae (isolates:74; rSTs:57 tree)
- Photobacterium frigidiphilum (isolates:1; rSTs:1)
- Photobacterium gaetbulicola (isolates:3; rSTs:2)
- Photobacterium galatheae (isolates:2; rSTs:1)
- Photobacterium ganghwense (isolates:4; rSTs:3 tree)
- Photobacterium halotolerans (isolates:4; rSTs:3 tree)
- Photobacterium iliopiscarium (isolates:10; rSTs:6 tree)
- Photobacterium indicum (isolates:1; rSTs:1)
- Photobacterium jeanii (isolates:2; rSTs:1)
- Photobacterium kishitanii (isolates:26; rSTs:15 tree)
- Photobacterium leiognathi (isolates:105; rSTs:85 tree)
- Photobacterium lipolyticum (isolates:1; rSTs:1)
- Photobacterium lucens (isolates:2; rSTs:1)
- Photobacterium lutimaris (isolates:2; rSTs:1)
- Photobacterium malacitanum (isolates:1; rSTs:1)
- Photobacterium marinum (isolates:1; rSTs:1)
- Photobacterium obscurum (isolates:1; rSTs:1)
- Photobacterium phosphoreum (isolates:37; rSTs:23 tree)
- Photobacterium piscicola (isolates:5; rSTs:5)
- Photobacterium profundum (isolates:1; rSTs:1)
- Photobacterium proteolyticum (isolates:1; rSTs:1)
- Photobacterium rosenbergii (isolates:2; rSTs:2)
- Photobacterium salinisoli (isolates:1; rSTs:1)
- Photobacterium sanctipauli (isolates:2; rSTs:1)
- Photobacterium sanguinicancri (isolates:6; rSTs:6 tree)
- Photobacterium sp. (isolates:32; rSTs:32 tree)
- Photobacterium swingsii (isolates:3; rSTs:2)
- Photobacterium toruni (isolates:5; rSTs:5 tree)
- Salinivibrio (isolates:60; rSTs:44 tree)
- Salinivibrio costicola (isolates:3; rSTs:2)
- Salinivibrio kushneri (isolates:14; rSTs:10 tree)
- Salinivibrio proteolyticus (isolates:3; rSTs:3 tree)
- Salinivibrio sharmensis (isolates:1; rSTs:1)
- Salinivibrio siamensis (isolates:1; rSTs:1)
- Salinivibrio socompensis (isolates:3; rSTs:2)
- Salinivibrio sp. (isolates:35; rSTs:25 tree)
- Thaumasiovibrio (isolates:4; rSTs:2)
- Veronia (isolates:2; rSTs:2)
- Vibrio (isolates:21078; rSTs:7084)
- Vibrio aerogenes (isolates:2; rSTs:1)
- Vibrio aestivus (isolates:1; rSTs:1)
- Vibrio aestuarianus (isolates:93; rSTs:29 tree)
- Vibrio agarilyticus (isolates:1; rSTs:1)
- Vibrio agarivorans (isolates:1; rSTs:1)
- Vibrio albus (isolates:1; rSTs:1)
- Vibrio alfacsensis (isolates:4; rSTs:4 tree)
- Vibrio algicola (isolates:1; rSTs:1)
- Vibrio alginolyticus (isolates:641; rSTs:406 tree)
- Vibrio algivorus (isolates:4; rSTs:2)
- Vibrio amylolyticus (isolates:1; rSTs:1)
- Vibrio anguillarum (isolates:123; rSTs:42 tree)
- Vibrio antiquarius (isolates:14; rSTs:12 tree)
- Vibrio aphrogenes (isolates:1; rSTs:1)
- Vibrio aquaticus (isolates:1; rSTs:1)
- Vibrio aquimaris (isolates:1; rSTs:1)
- Vibrio artabrorum (isolates:2; rSTs:2)
- Vibrio astriarenae (isolates:1; rSTs:1)
- Vibrio atlanticus (isolates:5; rSTs:4 tree)
- Vibrio atypicus (isolates:2; rSTs:2)
- Vibrio azureus (isolates:3; rSTs:1)
- Vibrio barjaei (isolates:2; rSTs:2)
- Vibrio bathopelagicus (isolates:1; rSTs:1)
- Vibrio bivalvicida (isolates:1; rSTs:1)
- Vibrio brasiliensis (isolates:5; rSTs:5 tree)
- Vibrio breoganii (isolates:61; rSTs:47 tree)
- Vibrio campbellii (isolates:93; rSTs:45 tree)
- Vibrio caribbeanicus (isolates:2; rSTs:2)
- Vibrio casei (isolates:4; rSTs:3 tree)
- Vibrio celticus (isolates:3; rSTs:1)
- Vibrio chagasii (isolates:147; rSTs:66 tree)
- Vibrio chanodichtyis (isolates:1; rSTs:1)
- Vibrio chemaguriensis (isolates:1; rSTs:1)
- Vibrio cholerae (isolates:7126; rSTs:1824)
- Vibrio cidicii (isolates:9; rSTs:8 tree)
- Vibrio cincinnatiensis (isolates:19; rSTs:15 tree)
- Vibrio comitans (isolates:2; rSTs:1)
- Vibrio coralliilyticus (isolates:37; rSTs:30 tree)
- Vibrio coralliirubri (isolates:23; rSTs:20 tree)
- Vibrio cortegadensis (isolates:2; rSTs:1)
- Vibrio crassostreae (isolates:167; rSTs:38 tree)
- Vibrio cyclitrophicus (isolates:88; rSTs:56 tree)
- Vibrio diabolicus (isolates:1; rSTs:1)
- Vibrio diazotrophicus (isolates:9; rSTs:8 tree)
- Vibrio echinoideorum (isolates:2; rSTs:1)
- Vibrio europaeus (isolates:38; rSTs:10 tree)
- Vibrio ezurae (isolates:2; rSTs:1)
- Vibrio floridensis (isolates:1; rSTs:1)
- Vibrio fluminensis (isolates:1; rSTs:1)
- Vibrio fluvialis (isolates:307; rSTs:230 tree)
- Vibrio fortis (isolates:4; rSTs:4 tree)
- Vibrio fujianensis (isolates:1; rSTs:1)
- Vibrio furnissii (isolates:27; rSTs:21 tree)
- Vibrio galatheae (isolates:1; rSTs:1)
- Vibrio gallaecicus (isolates:4; rSTs:1)
- Vibrio gallicus (isolates:1; rSTs:1)
- Vibrio gangliei (isolates:2; rSTs:1)
- Vibrio gazogenes (isolates:5; rSTs:2)
- Vibrio gelatinilyticus (isolates:1; rSTs:1)
- Vibrio genomosp. F10 (isolates:5; rSTs:3 tree)
- Vibrio genomosp. F6 (isolates:2; rSTs:1)
- Vibrio gigantis (isolates:6; rSTs:4 tree)
- Vibrio halioticoli (isolates:2; rSTs:1)
- Vibrio hangzhouensis (isolates:2; rSTs:2)
- Vibrio harveyi (isolates:104; rSTs:85 tree)
- Vibrio hepatarius (isolates:3; rSTs:3 tree)
- Vibrio hibernica (isolates:1; rSTs:1)
- Vibrio hippocampi (isolates:1; rSTs:1)
- Vibrio hyugaensis (isolates:7; rSTs:5 tree)
- Vibrio ichthyoenteri (isolates:1; rSTs:1)
- Vibrio injensis (isolates:2; rSTs:2)
- Vibrio intestinalis (isolates:1; rSTs:1)
- Vibrio inusitatus (isolates:2; rSTs:1)
- Vibrio ishigakensis (isolates:4; rSTs:4 tree)
- Vibrio japonicus (isolates:1; rSTs:1)
- Vibrio jasicida (isolates:18; rSTs:19 tree)
- Vibrio kanaloae (isolates:18; rSTs:15 tree)
- Vibrio lentus (isolates:98; rSTs:40 tree)
- Vibrio litoralis (isolates:2; rSTs:2)
- Vibrio madracius (isolates:1)
- Vibrio maerlii (isolates:1; rSTs:1)
- Vibrio mangrovi (isolates:3; rSTs:1)
- Vibrio marinisediminis (isolates:1; rSTs:1)
- Vibrio marisflavi (isolates:2; rSTs:2)
- Vibrio maritimus (isolates:4; rSTs:2)
- Vibrio mediterranei (isolates:16; rSTs:12 tree)
- Vibrio methylphosphonaticus (isolates:1; rSTs:1)
- Vibrio metoecus (isolates:28; rSTs:24 tree)
- Vibrio metschnikovii (isolates:156; rSTs:110 tree)
- Vibrio mexicanus (isolates:1; rSTs:1)
- Vibrio mimicus (isolates:37; rSTs:35 tree)
- Vibrio mytili (isolates:2; rSTs:2)
- Vibrio natriegens (isolates:17; rSTs:10 tree)
- Vibrio navarrensis (isolates:36; rSTs:29 tree)
- Vibrio neonatus (isolates:1; rSTs:1)
- Vibrio neptunius (isolates:8; rSTs:5 tree)
- Vibrio nereis (isolates:3; rSTs:2)
- Vibrio nigripulchritudo (isolates:21; rSTs:11 tree)
- Vibrio nitrifigilis (isolates:1; rSTs:1)
- Vibrio ordalii (isolates:1; rSTs:1)
- Vibrio orientalis (isolates:2; rSTs:1)
- Vibrio ostreae (isolates:1; rSTs:1)
- Vibrio ostreicida (isolates:3; rSTs:2)
- Vibrio ouci (isolates:1; rSTs:1)
- Vibrio owensii (isolates:32; rSTs:44 tree)
- Vibrio pacinii (isolates:1; rSTs:1)
- Vibrio palustris (isolates:2; rSTs:1)
- Vibrio panuliri (isolates:4; rSTs:3 tree)
- Vibrio paracholerae (isolates:31; rSTs:27 tree)
- Vibrio parahaemolyticus (isolates:9512; rSTs:2280 tree)
- Vibrio paucivorans (isolates:1; rSTs:1)
- Vibrio pectenicida (isolates:3; rSTs:2)
- Vibrio pelagius (isolates:2; rSTs:2)
- Vibrio penaeicida (isolates:9; rSTs:6 tree)
- Vibrio plantisponsor (isolates:3; rSTs:1)
- Vibrio pomeroyi (isolates:1; rSTs:1)
- Vibrio ponticus (isolates:3; rSTs:2)
- Vibrio porteresiae (isolates:2; rSTs:1)
- Vibrio profundi (isolates:1; rSTs:1)
- Vibrio proteolyticus (isolates:1; rSTs:1)
- Vibrio qingdaonensis (isolates:1; rSTs:1)
- Vibrio qinghaiensis (isolates:1; rSTs:1)
- Vibrio quintilis (isolates:2; rSTs:1)
- Vibrio rarus (isolates:1; rSTs:1)
- Vibrio renipiscarius (isolates:2; rSTs:2)
- Vibrio rhizosphaerae (isolates:3; rSTs:3 tree)
- Vibrio rhodolitus (isolates:1; rSTs:1)
- Vibrio rotiferianus (isolates:15; rSTs:14 tree)
- Vibrio ruber (isolates:3; rSTs:2)
- Vibrio rumoiensis (isolates:1; rSTs:1)
- Vibrio salilacus (isolates:1; rSTs:1)
- Vibrio salinus (isolates:1; rSTs:1)
- Vibrio scophthalmi (isolates:5; rSTs:4 tree)
- Vibrio sinaloensis (isolates:1; rSTs:1)
- Vibrio sinensis (isolates:1; rSTs:1)
- Vibrio sinus (isolates:1; rSTs:1)
- Vibrio sonorensis (isolates:1; rSTs:1)
- Vibrio sp. (isolates:509; rSTs:457 tree)
- Vibrio spartinae (isolates:3; rSTs:2)
- Vibrio splendidus (isolates:129; rSTs:102 tree)
- Vibrio stylophorae (isolates:1; rSTs:1)
- Vibrio superstes (isolates:2; rSTs:1)
- Vibrio syngnathi (isolates:1; rSTs:1)
- Vibrio taketomensis (isolates:2; rSTs:2)
- Vibrio tapetis (isolates:1; rSTs:1)
- Vibrio tarriae (isolates:9; rSTs:9 tree)
- Vibrio tasmaniensis (isolates:2; rSTs:1)
- Vibrio tetraodonis (isolates:2; rSTs:2)
- Vibrio thalassae (isolates:1; rSTs:1)
- Vibrio toranzoniae (isolates:6; rSTs:5 tree)
- Vibrio tritonius (isolates:2; rSTs:2)
- Vibrio tubiashii (isolates:8; rSTs:6 tree)
- Vibrio ulleungensis (isolates:1; rSTs:1)
- Vibrio variabilis (isolates:1; rSTs:1)
- Vibrio viridaestus (isolates:1; rSTs:1)
- Vibrio vulnificus (isolates:1010; rSTs:653 tree)
- Vibrio xiamenensis (isolates:1; rSTs:1)
- Vibrio xuii (isolates:1; rSTs:2)
- Vibrio zhanjiangensis (isolates:1; rSTs:1)
- Vibrio zhugei (isolates:2; rSTs:1)
- Vibrio ziniensis (isolates:1; rSTs:1)
- Aliivibrio (isolates:112; rSTs:74 tree)
- Vibrionaceae (isolates:21712; rSTs:7542)
- Woeseiales (isolates:1; rSTs:1)
- Xanthomonadales (isolates:5048; rSTs:2243)
- Rhodanobacteraceae (isolates:175; rSTs:157 tree)
- Aerosticca (isolates:1; rSTs:1)
- Aerosticca soli (isolates:1; rSTs:1)
- Ahniella (isolates:1; rSTs:1)
- Ahniella affigens (isolates:1; rSTs:1)
- Aquimonas (isolates:1; rSTs:1)
- Aquimonas voraii (isolates:1; rSTs:1)
- Chiayiivirga (isolates:1; rSTs:1)
- Chiayiivirga flava (isolates:1; rSTs:1)
- Dokdonella (isolates:5; rSTs:5 tree)
- Dyella (isolates:52; rSTs:51 tree)
- Dyella acidiphila (isolates:1; rSTs:1)
- Dyella acidisoli (isolates:1; rSTs:1)
- Dyella amyloliquefaciens (isolates:1; rSTs:1)
- Dyella caseinilytica (isolates:2; rSTs:2)
- Dyella choica (isolates:1; rSTs:1)
- Dyella dinghuensis (isolates:1; rSTs:1)
- Dyella flagellata (isolates:1; rSTs:1)
- Dyella flava (isolates:2; rSTs:1)
- Dyella ginsengisoli (isolates:1; rSTs:1)
- Dyella halodurans (isolates:1; rSTs:1)
- Dyella humicola (isolates:1; rSTs:1)
- Dyella japonica (isolates:1; rSTs:1)
- Dyella jiangningensis (isolates:1; rSTs:1)
- Dyella kyungheensis (isolates:1; rSTs:1)
- Dyella lipolytica (isolates:1; rSTs:1)
- Dyella lutea (isolates:1; rSTs:1)
- Dyella marensis (isolates:1; rSTs:1)
- Dyella mobilis (isolates:2; rSTs:1)
- Dyella monticola (isolates:1; rSTs:1)
- Dyella nitratireducens (isolates:2; rSTs:2)
- Dyella psychrodurans (isolates:1; rSTs:1)
- Dyella sedimenti (isolates:1; rSTs:1)
- Dyella silvae (isolates:1; rSTs:1)
- Dyella silvatica (isolates:1; rSTs:1)
- Dyella solisilvae (isolates:1; rSTs:1)
- Dyella sp. (isolates:18; rSTs:19 tree)
- Dyella subtropica (isolates:1; rSTs:1)
- Dyella tabacisoli (isolates:1; rSTs:1)
- Dyella telluris (isolates:1; rSTs:1)
- Dyella terrae (isolates:1; rSTs:1)
- Dyella thiooxydans (isolates:1; rSTs:1)
- Frateuria (isolates:8; rSTs:7 tree)
- Fulvimonas (isolates:3; rSTs:2)
- Luteibacter (isolates:29; rSTs:28 tree)
- Luteibacter aegosomaticola (isolates:1; rSTs:1)
- Luteibacter aegosomatis (isolates:1; rSTs:1)
- Luteibacter aegosomatissinici (isolates:1; rSTs:1)
- Luteibacter anthropi (isolates:2; rSTs:2)
- Luteibacter flocculans (isolates:1; rSTs:1)
- Luteibacter jiangsuensis (isolates:1; rSTs:1)
- Luteibacter pinisoli (isolates:1; rSTs:1)
- Luteibacter rhizovicinus (isolates:3; rSTs:1)
- Luteibacter sp. (isolates:17; rSTs:18 tree)
- Luteibacter yeojuensis (isolates:1; rSTs:1)
- Metallibacterium (isolates:2; rSTs:1)
- Metallibacterium scheffleri (isolates:2; rSTs:1)
- Mizugakiibacter (isolates:1; rSTs:1)
- Mizugakiibacter sediminis (isolates:1; rSTs:1)
- Oleiagrimonas (isolates:5; rSTs:4 tree)
- Pinirhizobacter (isolates:3; rSTs:3 tree)
- Pseudofulvimonas (isolates:3; rSTs:1)
- Pseudofulvimonas gallinarii (isolates:3; rSTs:1)
- Rhodanobacter (isolates:53; rSTs:43 tree)
- Rhodanobacter denitrificans (isolates:10; rSTs:5 tree)
- Rhodanobacter fulvus (isolates:1; rSTs:1)
- Rhodanobacter glycinis (isolates:2; rSTs:2)
- Rhodanobacter lindaniclasticus (isolates:1; rSTs:1)
- Rhodanobacter panaciterrae (isolates:1; rSTs:1)
- Rhodanobacter sp. (isolates:34; rSTs:29 tree)
- Rhodanobacter spathiphylli (isolates:1; rSTs:1)
- Rhodanobacter thiooxydans (isolates:3; rSTs:3 tree)
- Rudaea (isolates:2; rSTs:2)
- Tahibacter (isolates:5; rSTs:5 tree)
- Aerosticca (isolates:1; rSTs:1)
- Xanthomonadaceae (isolates:4873; rSTs:2086)
- Alkalisalibacterium (isolates:1)
- Alkalisalibacterium limincola (isolates:1)
- Arenimonas (isolates:16; rSTs:12 tree)
- Arenimonas caeni (isolates:1; rSTs:1)
- Arenimonas composti (isolates:3; rSTs:1)
- Arenimonas daejeonensis (isolates:1; rSTs:1)
- Arenimonas donghaensis (isolates:1; rSTs:1)
- Arenimonas fontis (isolates:1; rSTs:1)
- Arenimonas malthae (isolates:1; rSTs:1)
- Arenimonas maotaiensis (isolates:1; rSTs:1)
- Arenimonas metalli (isolates:1; rSTs:1)
- Arenimonas oryziterrae (isolates:3; rSTs:1)
- Arenimonas soli (isolates:1; rSTs:1)
- Arenimonas sp. (isolates:1; rSTs:1)
- Arenimonas terrae (isolates:1; rSTs:1)
- Coralloluteibacterium (isolates:1; rSTs:1)
- Coralloluteibacterium stylophorae (isolates:1; rSTs:1)
- Luteimonas (isolates:64; rSTs:58 tree)
- Luteimonas abyssi (isolates:1; rSTs:1)
- Luteimonas aestuarii (isolates:1; rSTs:1)
- Luteimonas aquatica (isolates:1; rSTs:1)
- Luteimonas arsenica (isolates:1; rSTs:1)
- Luteimonas cellulosilyticus (isolates:1; rSTs:1)
- Luteimonas chenhongjianii (isolates:1; rSTs:1)
- Luteimonas colneyensis (isolates:1; rSTs:1)
- Luteimonas composti (isolates:1; rSTs:1)
- Luteimonas cucumeris (isolates:1; rSTs:1)
- Luteimonas deserti (isolates:1; rSTs:1)
- Luteimonas endophytica (isolates:1)
- Luteimonas fraxinea (isolates:3; rSTs:3 tree)
- Luteimonas galliterrae (isolates:1; rSTs:1)
- Luteimonas gilva (isolates:1; rSTs:1)
- Luteimonas granuli (isolates:1; rSTs:1)
- Luteimonas huabeiensis (isolates:1; rSTs:1)
- Luteimonas kalidii (isolates:1)
- Luteimonas lumbrici (isolates:1; rSTs:1)
- Luteimonas marina (isolates:1; rSTs:1)
- Luteimonas mephitis (isolates:1; rSTs:1)
- Luteimonas padinae (isolates:1; rSTs:1)
- Luteimonas panaciterrae (isolates:1; rSTs:1)
- Luteimonas rhizosphaericola (isolates:1)
- Luteimonas salinisoli (isolates:1; rSTs:1)
- Luteimonas saliphila (isolates:1; rSTs:1)
- Luteimonas sp (isolates:1; rSTs:1)
- Luteimonas sp. (isolates:27; rSTs:25 tree)
- Luteimonas suaedae (isolates:1; rSTs:1)
- Luteimonas terrae (isolates:1; rSTs:1)
- Luteimonas terricola (isolates:2; rSTs:1)
- Luteimonas viscosa (isolates:1; rSTs:1)
- Luteimonas weifangensis (isolates:1; rSTs:1)
- Luteimonas wenzhouensis (isolates:1; rSTs:1)
- Luteimonas yindakuii (isolates:2; rSTs:2)
- Lysobacter (isolates:114; rSTs:104 tree)
- Lysobacter aestuarii (isolates:1; rSTs:1)
- Lysobacter alkalisoli (isolates:1; rSTs:1)
- Lysobacter antarcticus (isolates:1; rSTs:1)
- Lysobacter antibioticus (isolates:3; rSTs:3 tree)
- Lysobacter arenosi (isolates:1; rSTs:1)
- Lysobacter arseniciresistens (isolates:1; rSTs:1)
- Lysobacter arvi (isolates:1; rSTs:1)
- Lysobacter auxotrophicus (isolates:1; rSTs:1)
- Lysobacter avium (isolates:1; rSTs:1)
- Lysobacter bugurensis (isolates:1; rSTs:1)
- Lysobacter capsici (isolates:8; rSTs:7 tree)
- Lysobacter changpingensis (isolates:1; rSTs:1)
- Lysobacter chinensis (isolates:1; rSTs:1)
- Lysobacter ciconiae (isolates:1; rSTs:1)
- Lysobacter concretionis (isolates:1; rSTs:1)
- Lysobacter daejeonensis (isolates:1; rSTs:1)
- Lysobacter defluvii (isolates:3; rSTs:1)
- Lysobacter dokdonensis (isolates:1; rSTs:1)
- Lysobacter enzymogenes (isolates:9; rSTs:8 tree)
- Lysobacter gilvus (isolates:1; rSTs:1)
- Lysobacter gummosus (isolates:3; rSTs:2)
- Lysobacter helvus (isolates:1; rSTs:1)
- Lysobacter lactosilyticus (isolates:1; rSTs:1)
- Lysobacter lacus (isolates:1; rSTs:1)
- Lysobacter luteus (isolates:1; rSTs:1)
- Lysobacter lycopersici (isolates:1; rSTs:1)
- Lysobacter maris (isolates:2; rSTs:2)
- Lysobacter niabensis (isolates:1; rSTs:1)
- Lysobacter niastensis (isolates:1; rSTs:1)
- Lysobacter oculi (isolates:1; rSTs:1)
- Lysobacter panacisoli (isolates:1; rSTs:1)
- Lysobacter penaei (isolates:1; rSTs:1)
- Lysobacter prati (isolates:1; rSTs:1)
- Lysobacter profundi (isolates:1; rSTs:1)
- Lysobacter psychrotolerans (isolates:1; rSTs:1)
- Lysobacter pythonis (isolates:1; rSTs:1)
- Lysobacter ruishenii (isolates:1; rSTs:1)
- Lysobacter segetis (isolates:1; rSTs:1)
- Lysobacter selenitireducens (isolates:1; rSTs:1)
- Lysobacter silvestris (isolates:1; rSTs:1)
- Lysobacter silvisoli (isolates:1; rSTs:1)
- Lysobacter soli (isolates:4; rSTs:4 tree)
- Lysobacter solisilvae (isolates:1; rSTs:1)
- Lysobacter sp. (isolates:36; rSTs:32 tree)
- Lysobacter spongiae (isolates:1; rSTs:1)
- Lysobacter spongiicola (isolates:1; rSTs:1)
- Lysobacter tabacisoli (isolates:1; rSTs:1)
- Lysobacter telluris (isolates:1; rSTs:1)
- Lysobacter terrestris (isolates:1; rSTs:1)
- Lysobacter terrigena (isolates:1; rSTs:1)
- Lysobacter tolerans (isolates:1; rSTs:1)
- Lysobacter xinjiangensis (isolates:1; rSTs:1)
- Lysobacter yananisis (isolates:2; rSTs:1)
- Pseudolysobacter (isolates:1; rSTs:1)
- Pseudolysobacter antarcticus (isolates:1; rSTs:1)
- Pseudomarimonas (isolates:1; rSTs:1)
- Pseudomarimonas arenosa (isolates:1; rSTs:1)
- Pseudoxanthomonas (isolates:82; rSTs:74 tree)
- Pseudoxanthomonas beigongshangi (isolates:1; rSTs:1)
- Pseudoxanthomonas broegbernensis (isolates:2; rSTs:1)
- Pseudoxanthomonas composti (isolates:1; rSTs:1)
- Pseudoxanthomonas daejeonensis (isolates:2; rSTs:2)
- Pseudoxanthomonas dokdonensis (isolates:1; rSTs:1)
- Pseudoxanthomonas gei (isolates:1; rSTs:1)
- Pseudoxanthomonas helianthi (isolates:1; rSTs:1)
- Pseudoxanthomonas indica (isolates:2; rSTs:2)
- Pseudoxanthomonas japonensis (isolates:2; rSTs:2)
- Pseudoxanthomonas jiangsuensis (isolates:1; rSTs:1)
- Pseudoxanthomonas kalamensis (isolates:1; rSTs:1)
- Pseudoxanthomonas kaohsiungensis (isolates:1; rSTs:1)
- Pseudoxanthomonas koreensis (isolates:1; rSTs:1)
- Pseudoxanthomonas mexicana (isolates:7; rSTs:7 tree)
- Pseudoxanthomonas sacheonensis (isolates:1; rSTs:1)
- Pseudoxanthomonas sangjuensis (isolates:1; rSTs:1)
- Pseudoxanthomonas sp. (isolates:32; rSTs:30 tree)
- Pseudoxanthomonas spadix (isolates:3; rSTs:2)
- Pseudoxanthomonas suwonensis (isolates:2; rSTs:2)
- Pseudoxanthomonas taiwanensis (isolates:1; rSTs:1)
- Pseudoxanthomonas winnipegensis (isolates:15; rSTs:12 tree)
- Pseudoxanthomonas wuyuanensis (isolates:2; rSTs:1)
- Pseudoxanthomonas yeongjuensis (isolates:1; rSTs:1)
- Rehaibacterium (isolates:1; rSTs:1)
- Rehaibacterium terrae (isolates:1; rSTs:1)
- Silanimonas (isolates:1; rSTs:1)
- Silanimonas lenta (isolates:1; rSTs:1)
- Stenotrophomonas (isolates:1182; rSTs:884 tree)
- Stenotrophomonas acidaminiphila (isolates:13; rSTs:12 tree)
- Stenotrophomonas bentonitica (isolates:1; rSTs:1)
- Stenotrophomonas chelatiphaga (isolates:2; rSTs:2)
- Stenotrophomonas cyclobalanopsidis (isolates:1; rSTs:1)
- Stenotrophomonas daejeonensis (isolates:1; rSTs:1)
- Stenotrophomonas geniculata (isolates:22; rSTs:15 tree)
- Stenotrophomonas ginsengisoli (isolates:1; rSTs:1)
- Stenotrophomonas humi (isolates:1; rSTs:1)
- Stenotrophomonas indicatrix (isolates:25; rSTs:22 tree)
- Stenotrophomonas koreensis (isolates:2; rSTs:2)
- Stenotrophomonas lactitubi (isolates:12; rSTs:7 tree)
- Stenotrophomonas lacuserhaii (isolates:2; rSTs:1)
- Stenotrophomonas maltophilia (isolates:839; rSTs:401 tree)
- Stenotrophomonas mori (isolates:1; rSTs:1)
- Stenotrophomonas muris (isolates:10; rSTs:9)
- Stenotrophomonas nematodicola (isolates:1; rSTs:1)
- Stenotrophomonas nitritireducens (isolates:1; rSTs:1)
- Stenotrophomonas panacihumi (isolates:2; rSTs:1)
- Stenotrophomonas pavanii (isolates:18; rSTs:14 tree)
- Stenotrophomonas pennii (isolates:1; rSTs:1)
- Stenotrophomonas pictorum (isolates:2; rSTs:1)
- Stenotrophomonas rhizophila (isolates:8; rSTs:8 tree)
- Stenotrophomonas riyadhensis (isolates:1)
- Stenotrophomonas sepilia (isolates:15; rSTs:10)
- Stenotrophomonas sp. (isolates:198; rSTs:368 tree)
- Stenotrophomonas terrae (isolates:1; rSTs:1)
- Stenotrophomonas tumulicola (isolates:1; rSTs:1)
- Thermomonas (isolates:18; rSTs:15 tree)
- Thermomonas alba (isolates:1; rSTs:1)
- Thermomonas aquatica (isolates:1; rSTs:1)
- Thermomonas beijingensis (isolates:1; rSTs:1)
- Thermomonas brevis (isolates:1; rSTs:1)
- Thermomonas carbonis (isolates:2; rSTs:1)
- Thermomonas fusca (isolates:2; rSTs:2)
- Thermomonas haemolytica (isolates:3; rSTs:1)
- Thermomonas hydrothermalis (isolates:1; rSTs:1)
- Thermomonas mangrovi (isolates:1; rSTs:1)
- Thermomonas paludicola (isolates:1; rSTs:1)
- Thermomonas sp. (isolates:4; rSTs:4 tree)
- Vulcaniibacterium (isolates:5; rSTs:3 tree)
- Xanthomonas (isolates:3134; rSTs:879 tree)
- Xanthomonas albilineans (isolates:22; rSTs:8 tree)
- Xanthomonas alfalfae (isolates:1; rSTs:1)
- Xanthomonas arboricola (isolates:164; rSTs:92 tree)
- Xanthomonas axonopodis (isolates:3; rSTs:3 tree)
- Xanthomonas bonasiae (isolates:2; rSTs:2)
- Xanthomonas bromi (isolates:2; rSTs:1)
- Xanthomonas campestris (isolates:470; rSTs:181 tree)
- Xanthomonas cannabis (isolates:11; rSTs:11 tree)
- Xanthomonas cassavae (isolates:2; rSTs:1)
- Xanthomonas cissicola (isolates:2; rSTs:1)
- Xanthomonas citri (isolates:513; rSTs:105 tree)
- Xanthomonas codiaei (isolates:2; rSTs:2)
- Xanthomonas cucurbitae (isolates:7; rSTs:3 tree)
- Xanthomonas dyei (isolates:6; rSTs:4 tree)
- Xanthomonas euroxanthea (isolates:14; rSTs:11 tree)
- Xanthomonas euvesicatoria (isolates:126; rSTs:34 tree)
- Xanthomonas floridensis (isolates:3; rSTs:1)
- Xanthomonas fragariae (isolates:81; rSTs:11 tree)
- Xanthomonas hortorum (isolates:160; rSTs:36 tree)
- Xanthomonas hyacinthi (isolates:2; rSTs:1)
- Xanthomonas hydrangeae (isolates:5; rSTs:3 tree)
- Xanthomonas indica (isolates:2; rSTs:2)
- Xanthomonas maliensis (isolates:1; rSTs:1)
- Xanthomonas massiliensis (isolates:2; rSTs:1)
- Xanthomonas melonis (isolates:6; rSTs:4 tree)
- Xanthomonas nasturtii (isolates:21; rSTs:11 tree)
- Xanthomonas oryzae (isolates:451; rSTs:116 tree)
- Xanthomonas perforans (isolates:515; rSTs:28 tree)
- Xanthomonas phaseoli (isolates:161; rSTs:40 tree)
- Xanthomonas pisi (isolates:1; rSTs:1)
- Xanthomonas populi (isolates:1; rSTs:1)
- Xanthomonas prunicola (isolates:10; rSTs:5 tree)
- Xanthomonas sacchari (isolates:5; rSTs:1)
- Xanthomonas sontii (isolates:5; rSTs:3 tree)
- Xanthomonas sp. (isolates:86; rSTs:62 tree)
- Xanthomonas surreyensis (isolates:1; rSTs:1)
- Xanthomonas theicola (isolates:2; rSTs:1)
- Xanthomonas translucens (isolates:110; rSTs:59 tree)
- Xanthomonas vasicola (isolates:124; rSTs:24 tree)
- Xanthomonas vesicatoria (isolates:32; rSTs:6 tree)
- Xylella (isolates:252; rSTs:52 tree)
- Alkalisalibacterium (isolates:1)
- Rhodanobacteraceae (isolates:175; rSTs:157 tree)
- Hydrogenophilia (isolates:12; rSTs:11 tree)
- Zetaproteobacteria (isolates:13; rSTs:12 tree)
- Acidithiobacillia (isolates:121; rSTs:66 tree)
- Rhodothermota (isolates:259; rSTs:171 tree)
- Rhodothermia (isolates:259; rSTs:171 tree)
- Rhodothermales (isolates:259; rSTs:171 tree)
- Rhodothermia (isolates:259; rSTs:171 tree)
- Spirochaetota (isolates:2683; rSTs:1055 tree)
- Spirochaetia (isolates:2683; rSTs:1055 tree)
- Brachyspirales (isolates:243; rSTs:147 tree)
- Brachyspiraceae (isolates:243; rSTs:147 tree)
- Brachyspira (isolates:243; rSTs:147 tree)
- Brachyspira aalborgi (isolates:17; rSTs:15 tree)
- Brachyspira alvinipulli (isolates:2; rSTs:2)
- Brachyspira catarrhinii (isolates:1)
- Brachyspira hampsonii (isolates:10; rSTs:7 tree)
- Brachyspira hyodysenteriae (isolates:142; rSTs:71 tree)
- Brachyspira innocens (isolates:3; rSTs:2)
- Brachyspira intermedia (isolates:12; rSTs:9)
- Brachyspira murdochii (isolates:5; rSTs:5 tree)
- Brachyspira pilosicoli (isolates:47; rSTs:34 tree)
- Brachyspira sp. (isolates:3; rSTs:1)
- Brachyspira suanatina (isolates:1; rSTs:1)
- Brachyspira (isolates:243; rSTs:147 tree)
- Brachyspiraceae (isolates:243; rSTs:147 tree)
- Brevinematales (isolates:1; rSTs:1)
- Leptospirales (isolates:1020; rSTs:455 tree)
- Leptospiraceae (isolates:1020; rSTs:455 tree)
- Leptonema (isolates:2; rSTs:1)
- Leptonema illini (isolates:2; rSTs:1)
- Leptospira (isolates:1017; rSTs:453 tree)
- Leptospira abararensis (isolates:1; rSTs:1)
- Leptospira adleri (isolates:3; rSTs:1)
- Leptospira ainazelensis (isolates:1; rSTs:1)
- Leptospira ainlahdjerensis (isolates:1; rSTs:1)
- Leptospira alexanderi (isolates:7; rSTs:5 tree)
- Leptospira alstonii (isolates:6; rSTs:3 tree)
- Leptospira andrefontaineae (isolates:1; rSTs:1)
- Leptospira bandrabouensis (isolates:8; rSTs:4 tree)
- Leptospira barantonii (isolates:2; rSTs:2)
- Leptospira biflexa (isolates:7; rSTs:4 tree)
- Leptospira borgpetersenii (isolates:166; rSTs:30 tree)
- Leptospira bourretii (isolates:4; rSTs:2)
- Leptospira bouyouniensis (isolates:3; rSTs:3 tree)
- Leptospira brenneri (isolates:2; rSTs:2)
- Leptospira broomii (isolates:2; rSTs:1)
- Leptospira chreensis (isolates:1; rSTs:1)
- Leptospira congkakensis (isolates:3; rSTs:1)
- Leptospira dzoumogneensis (isolates:1; rSTs:1)
- Leptospira ellinghausenii (isolates:1; rSTs:1)
- Leptospira ellisii (isolates:2; rSTs:2)
- Leptospira fainei (isolates:2; rSTs:1)
- Leptospira fletcheri (isolates:1; rSTs:1)
- Leptospira fluminis (isolates:1; rSTs:1)
- Leptospira gomenensis (isolates:4; rSTs:1)
- Leptospira haakeii (isolates:2; rSTs:1)
- Leptospira harrisiae (isolates:2; rSTs:1)
- Leptospira hartskeerlii (isolates:2; rSTs:1)
- Leptospira idonii (isolates:1; rSTs:1)
- Leptospira ilyithenensis (isolates:1; rSTs:1)
- Leptospira inadai (isolates:3; rSTs:1)
- Leptospira interrogans (isolates:475; rSTs:145 tree)
- Leptospira jelokensis (isolates:2; rSTs:2)
- Leptospira johnsonii (isolates:1; rSTs:1)
- Leptospira kanakyensis (isolates:5; rSTs:3 tree)
- Leptospira kemamanensis (isolates:1; rSTs:1)
- Leptospira kirschneri (isolates:46; rSTs:30 tree)
- Leptospira kmetyi (isolates:7; rSTs:5 tree)
- Leptospira kobayashii (isolates:1; rSTs:1)
- Leptospira koniambonensis (isolates:1; rSTs:1)
- Leptospira langatensis (isolates:2; rSTs:2)
- Leptospira levettii (isolates:22; rSTs:19 tree)
- Leptospira licerasiae (isolates:8; rSTs:3)
- Leptospira limi (isolates:1; rSTs:1)
- Leptospira mayottensis (isolates:6; rSTs:4 tree)
- Leptospira meyeri (isolates:13; rSTs:9 tree)
- Leptospira montravelensis (isolates:2; rSTs:1)
- Leptospira mtsangambouensis (isolates:2; rSTs:2)
- Leptospira neocaledonica (isolates:1; rSTs:1)
- Leptospira noguchii (isolates:34; rSTs:25 tree)
- Leptospira noumeaensis (isolates:1; rSTs:1)
- Leptospira ognonensis (isolates:1; rSTs:1)
- Leptospira paudalimensis (isolates:1; rSTs:1)
- Leptospira perdikensis (isolates:1; rSTs:1)
- Leptospira perolatii (isolates:2; rSTs:1)
- Leptospira ryugenii (isolates:1; rSTs:1)
- Leptospira saintgironsiae (isolates:1; rSTs:1)
- Leptospira sanjuanensis (isolates:2; rSTs:2)
- Leptospira santarosai (isolates:75; rSTs:56 tree)
- Leptospira sarikeiensis (isolates:1; rSTs:1)
- Leptospira selangorensis (isolates:3; rSTs:2)
- Leptospira semungkisensis (isolates:1; rSTs:1)
- Leptospira soteropolitanensis (isolates:5; rSTs:1)
- Leptospira sp. (isolates:11; rSTs:26 tree)
- Leptospira stimsonii (isolates:4; rSTs:3 tree)
- Leptospira terpstrae (isolates:2; rSTs:1)
- Leptospira tipperaryensis (isolates:1; rSTs:1)
- Leptospira vanthielii (isolates:3; rSTs:2)
- Leptospira venezuelensis (isolates:6; rSTs:2)
- Leptospira weilii (isolates:2; rSTs:1)
- Leptospira wolbachii (isolates:2; rSTs:1)
- Leptospira wolffii (isolates:8; rSTs:4 tree)
- Leptospira yanagawae (isolates:3; rSTs:2)
- Leptospira yasudae (isolates:9; rSTs:7 tree)
- Turneriella (isolates:1; rSTs:1)
- Turneriella parva (isolates:1; rSTs:1)
- Leptonema (isolates:2; rSTs:1)
- Leptospiraceae (isolates:1020; rSTs:455 tree)
- Spirochaetales (isolates:1419; rSTs:452 tree)
- Borreliaceae (isolates:509; rSTs:284 tree)
- Borrelia (isolates:85; rSTs:46 tree)
- Borrelia anserina (isolates:3; rSTs:1)
- Borrelia coriaceae (isolates:3; rSTs:1)
- Borrelia crocidurae (isolates:3; rSTs:3 tree)
- Borrelia hermsii (isolates:8; rSTs:8 tree)
- Borrelia hispanica (isolates:1; rSTs:1)
- Borrelia maritima (isolates:1; rSTs:1)
- Borrelia miyamotoi (isolates:46; rSTs:14 tree)
- Borrelia parkeri (isolates:3; rSTs:2)
- Borrelia persica (isolates:1; rSTs:1)
- Borrelia puertoricensis (isolates:1; rSTs:1)
- Borrelia recurrentis (isolates:1; rSTs:1)
- Borrelia sp. (isolates:7; rSTs:7 tree)
- Borrelia turcica (isolates:1; rSTs:1)
- Borrelia turicatae (isolates:5; rSTs:3)
- Candidatus Borrelia fainii (isolates:1; rSTs:1)
- Borreliella (isolates:424; rSTs:238 tree)
- Borreliella afzelii (isolates:38; rSTs:25 tree)
- Borreliella americana (isolates:5; rSTs:4 tree)
- Borreliella andersonii (isolates:2; rSTs:2)
- Borreliella bavariensis (isolates:47; rSTs:28 tree)
- Borreliella bissettiae (isolates:4; rSTs:4 tree)
- Borreliella burgdorferi (isolates:149; rSTs:69 tree)
- Borreliella californiensis (isolates:3; rSTs:1)
- Borreliella carolinensis (isolates:4; rSTs:3 tree)
- Borreliella finlandensis (isolates:2; rSTs:2)
- Borreliella garinii (isolates:122; rSTs:64 tree)
- Borreliella japonica (isolates:3; rSTs:2)
- Borreliella kurtenbachii (isolates:1; rSTs:1)
- Borreliella lanei (isolates:2; rSTs:1)
- Borreliella lusitaniae (isolates:3; rSTs:3 tree)
- Borreliella mayonii (isolates:2; rSTs:2)
- Borreliella sinica (isolates:1; rSTs:1)
- Borreliella spielmanii (isolates:3; rSTs:3 tree)
- Borreliella tanukii (isolates:4; rSTs:4 tree)
- Borreliella turdi (isolates:5; rSTs:5 tree)
- Borreliella valaisiana (isolates:19; rSTs:11 tree)
- Borreliella yangtzensis (isolates:4; rSTs:2)
- Candidatus Borreliella tachyglossi (isolates:1; rSTs:1)
- Borrelia (isolates:85; rSTs:46 tree)
- Breznakiellaceae (isolates:3; rSTs:3 tree)
- Sphaerochaetaceae (isolates:9; rSTs:8 tree)
- Spirochaetaceae (isolates:25; rSTs:16 tree)
- Alkalispirochaeta (isolates:3; rSTs:3 tree)
- Bullifex (isolates:1; rSTs:1)
- Bullifex porci (isolates:1; rSTs:1)
- Entomospira (isolates:8)
- Marispirochaeta (isolates:1; rSTs:1)
- Marispirochaeta aestuarii (isolates:1; rSTs:1)
- Oceanispirochaeta (isolates:1; rSTs:1)
- Oceanispirochaeta crateris (isolates:1; rSTs:1)
- Salinispira (isolates:1; rSTs:1)
- Salinispira pacifica (isolates:1; rSTs:1)
- Sediminispirochaeta (isolates:3; rSTs:2)
- Spirochaeta (isolates:6; rSTs:6 tree)
- Thiospirochaeta (isolates:1; rSTs:1)
- Thiospirochaeta perfilievii (isolates:1; rSTs:1)
- Treponemataceae (isolates:872; rSTs:141 tree)
- Brucepastera (isolates:1; rSTs:1)
- Brucepastera parasyntrophica (isolates:1; rSTs:1)
- Teretinema (isolates:1; rSTs:1)
- Teretinema zuelzerae (isolates:1; rSTs:1)
- Treponema (isolates:870; rSTs:139 tree)
- Treponema berlinense (isolates:1; rSTs:1)
- Treponema brennaborense (isolates:1; rSTs:1)
- Treponema bryantii (isolates:3; rSTs:3 tree)
- Treponema denticola (isolates:44; rSTs:33 tree)
- Treponema maltophilum (isolates:1; rSTs:1)
- Treponema medium (isolates:7; rSTs:2)
- Treponema pallidum (isolates:729; rSTs:28 tree)
- Treponema paraluiscuniculi (isolates:2; rSTs:2)
- Treponema parvum (isolates:3; rSTs:3 tree)
- Treponema pectinovorum (isolates:5; rSTs:4 tree)
- Treponema pedis (isolates:9; rSTs:8 tree)
- Treponema peruense (isolates:1; rSTs:1)
- Treponema phagedenis (isolates:15; rSTs:11 tree)
- Treponema porcinum (isolates:1; rSTs:1)
- Treponema primitia (isolates:2; rSTs:2)
- Treponema putidum (isolates:5; rSTs:4 tree)
- Treponema rectale (isolates:1; rSTs:1)
- Treponema ruminis (isolates:1; rSTs:1)
- Treponema saccharophilum (isolates:1; rSTs:1)
- Treponema socranskii (isolates:6; rSTs:4 tree)
- Treponema sp. (isolates:21; rSTs:20 tree)
- Treponema succinifaciens (isolates:1; rSTs:1)
- Treponema vincentii (isolates:9; rSTs:5 tree)
- Treponema zioleckii (isolates:1; rSTs:1)
- Brucepastera (isolates:1; rSTs:1)
- Borreliaceae (isolates:509; rSTs:284 tree)
- Brachyspirales (isolates:243; rSTs:147 tree)
- Spirochaetia (isolates:2683; rSTs:1055 tree)
- Synergistota (isolates:49; rSTs:41 tree)
- Synergistia (isolates:49; rSTs:41 tree)
- Synergistales (isolates:49; rSTs:41 tree)
- Acetomicrobiaceae (isolates:5; rSTs:5 tree)
- Aminiphilaceae (isolates:1; rSTs:1)
- Aminithiophilaceae (isolates:1; rSTs:1)
- Aminobacteriaceae (isolates:7; rSTs:6 tree)
- Dethiosulfovibrionaceae (isolates:15; rSTs:15 tree)
- Synergistaceae (isolates:18; rSTs:12 tree)
- Thermovirgaceae (isolates:2; rSTs:1)
- Synergistales (isolates:49; rSTs:41 tree)
- Synergistia (isolates:49; rSTs:41 tree)
- Thermodesulfobacteriota (isolates:392; rSTs:328 tree)
- Candidatus Desulfofervidia (isolates:1; rSTs:1)
- Deferrisomatia (isolates:1; rSTs:1)
- Desulfarculia (isolates:4; rSTs:2)
- Desulfobaccia (isolates:2; rSTs:1)
- Desulfobacteria (isolates:49; rSTs:44 tree)
- Desulfatiglandales (isolates:1; rSTs:1)
- Desulfobacterales (isolates:48; rSTs:43 tree)
- Candidatus Magnetomoraceae (isolates:1; rSTs:1)
- Desulfatibacillaceae (isolates:3; rSTs:3 tree)
- Desulfatirhabdiaceae (isolates:1; rSTs:1)
- Desulfobacteraceae (isolates:20; rSTs:18 tree)
- Candidatus Magnetoglobus (isolates:1; rSTs:1)
- Candidatus Magnetoglobus multicellularis (isolates:1; rSTs:1)
- Desulfamplus (isolates:1; rSTs:1)
- Desulfamplus magnetovallimortis (isolates:1; rSTs:1)
- Desulfobacter (isolates:7; rSTs:5 tree)
- Desulfobacula (isolates:3; rSTs:3 tree)
- Desulfobotulus (isolates:3; rSTs:3 tree)
- Desulfocicer (isolates:1; rSTs:1)
- Desulfocicer vacuolatum (isolates:1; rSTs:1)
- Desulforapulum (isolates:1; rSTs:1)
- Desulforapulum autotrophicum (isolates:1; rSTs:1)
- Desulfospira (isolates:1; rSTs:1)
- Desulfospira joergensenii (isolates:1; rSTs:1)
- Desulfotignum (isolates:2; rSTs:2)
- Candidatus Magnetoglobus (isolates:1; rSTs:1)
- Desulfococcaceae (isolates:7; rSTs:4 tree)
- Desulfofabaceae (isolates:1; rSTs:1)
- Desulfolunaceae (isolates:4; rSTs:4 tree)
- Desulforegulaceae (isolates:1; rSTs:1)
- Desulfosalsimonadaceae (isolates:1; rSTs:1)
- Desulfosarcinaceae (isolates:8; rSTs:8 tree)
- Desulfosudaceae (isolates:1; rSTs:1)
- Desulfobulbia (isolates:28; rSTs:22 tree)
- Desulfobulbales (isolates:28; rSTs:22 tree)
- Desulfobulbaceae (isolates:18; rSTs:13 tree)
- Desulfobulbus (isolates:8; rSTs:5 tree)
- Desulfogranum (isolates:3; rSTs:3 tree)
- Desulfolithobacter (isolates:1; rSTs:1)
- Desulfolithobacter dissulfuricans (isolates:1; rSTs:1)
- Desulfomarina (isolates:1; rSTs:1)
- Desulfomarina profundi (isolates:1; rSTs:1)
- Desulfoprunum (isolates:2; rSTs:1)
- Desulfoprunum benzoelyticum (isolates:2; rSTs:1)
- Desulfurivibrio (isolates:3; rSTs:2)
- Desulfocapsaceae (isolates:9; rSTs:8 tree)
- Desulfocapsa (isolates:1; rSTs:1)
- Desulfocapsa sulfexigens (isolates:1; rSTs:1)
- Desulfofustis (isolates:2; rSTs:1)
- Desulfopila (isolates:1; rSTs:1)
- Desulfopila aestuarii (isolates:1; rSTs:1)
- Desulforhopalus (isolates:2; rSTs:2)
- Desulfosediminicola (isolates:2; rSTs:2)
- Desulfotalea (isolates:1; rSTs:1)
- Desulfotalea psychrophila (isolates:1; rSTs:1)
- Desulfocapsa (isolates:1; rSTs:1)
- Thiovibrionaceae (isolates:1; rSTs:1)
- Desulfobulbaceae (isolates:18; rSTs:13 tree)
- Desulfobulbales (isolates:28; rSTs:22 tree)
- Desulfomonilia (isolates:1; rSTs:1)
- Desulfovibrionia (isolates:179; rSTs:150 tree)
- Desulfovibrionales (isolates:179; rSTs:150 tree)
- Desulfohalobiaceae (isolates:2; rSTs:2)
- Desulfomicrobiaceae (isolates:7; rSTs:7 tree)
- Desulfomicrobium (isolates:7; rSTs:7 tree)
- Desulfomicrobium apsheronum (isolates:1; rSTs:1)
- Desulfomicrobium baculatum (isolates:1; rSTs:1)
- Desulfomicrobium escambiense (isolates:1; rSTs:1)
- Desulfomicrobium macestii (isolates:1; rSTs:1)
- Desulfomicrobium norvegicum (isolates:1; rSTs:1)
- Desulfomicrobium orale (isolates:1; rSTs:1)
- Desulfomicrobium sp. (isolates:1; rSTs:1)
- Desulfomicrobium (isolates:7; rSTs:7 tree)
- Desulfonatronaceae (isolates:5; rSTs:5 tree)
- Desulfonatronovibrionaceae (isolates:3; rSTs:3 tree)
- Desulfonauticaceae (isolates:2; rSTs:2)
- Desulfoplanaceae (isolates:1; rSTs:1)
- Desulfothermaceae (isolates:1)
- Desulfovibrionaceae (isolates:158; rSTs:130 tree)
- Alkalidesulfovibrio (isolates:1; rSTs:1)
- Alkalidesulfovibrio alkalitolerans (isolates:1; rSTs:1)
- Bilophila (isolates:11; rSTs:7 tree)
- Desulfobaculum (isolates:3; rSTs:3 tree)
- Desulfocurvibacter (isolates:4; rSTs:4 tree)
- Desulfocurvus (isolates:1; rSTs:1)
- Desulfocurvus vexinensis (isolates:1; rSTs:1)
- Desulfohalovibrio (isolates:1; rSTs:1)
- Desulfohalovibrio reitneri (isolates:1; rSTs:1)
- Desulfolutivibrio (isolates:4; rSTs:3 tree)
- Desulfovibrio (isolates:56; rSTs:45 tree)
- Candidatus Desulfovibrio trichonymphae (isolates:1; rSTs:1)
- Desulfovibrio aminophilus (isolates:2; rSTs:2)
- Desulfovibrio cuneatus (isolates:1; rSTs:1)
- Desulfovibrio desulfuricans (isolates:13; rSTs:8 tree)
- Desulfovibrio fairfieldensis (isolates:1; rSTs:1)
- Desulfovibrio ferrophilus (isolates:1; rSTs:1)
- Desulfovibrio gilichinskyi (isolates:1; rSTs:1)
- Desulfovibrio inopinatus (isolates:1; rSTs:1)
- Desulfovibrio intestinalis (isolates:1; rSTs:1)
- Desulfovibrio legallii (isolates:3; rSTs:3 tree)
- Desulfovibrio litoralis (isolates:1; rSTs:1)
- Desulfovibrio mangrovi (isolates:1; rSTs:1)
- Desulfovibrio oxyclinae (isolates:1; rSTs:1)
- Desulfovibrio piger (isolates:8; rSTs:6 tree)
- Desulfovibrio porci (isolates:1; rSTs:1)
- Desulfovibrio psychrotolerans (isolates:1; rSTs:1)
- Desulfovibrio sp. (isolates:16; rSTs:12 tree)
- Desulfovibrio subterraneus (isolates:2; rSTs:2)
- Fundidesulfovibrio (isolates:5; rSTs:4 tree)
- Halodesulfovibrio (isolates:5; rSTs:5 tree)
- Humidesulfovibrio (isolates:1; rSTs:1)
- Humidesulfovibrio mexicanus (isolates:1; rSTs:1)
- Lawsonia (isolates:9; rSTs:5 tree)
- Mailhella (isolates:1; rSTs:1)
- Mailhella massiliensis (isolates:1; rSTs:1)
- Maridesulfovibrio (isolates:7; rSTs:6 tree)
- Maridesulfovibrio bastinii (isolates:1; rSTs:1)
- Maridesulfovibrio ferrireducens (isolates:1; rSTs:1)
- Maridesulfovibrio frigidus (isolates:1; rSTs:1)
- Maridesulfovibrio hydrothermalis (isolates:2; rSTs:1)
- Maridesulfovibrio salexigens (isolates:1; rSTs:1)
- Maridesulfovibrio zosterae (isolates:1; rSTs:1)
- Megalodesulfovibrio (isolates:2; rSTs:1)
- Megalodesulfovibrio gigas (isolates:2; rSTs:1)
- Nitratidesulfovibrio (isolates:12; rSTs:10 tree)
- Oceanidesulfovibrio (isolates:3; rSTs:2)
- Oleidesulfovibrio (isolates:2; rSTs:2)
- Oleidesulfovibrio alaskensis (isolates:2; rSTs:2)
- Paucidesulfovibrio (isolates:2; rSTs:2)
- Pseudodesulfovibrio (isolates:19; rSTs:17 tree)
- Pseudodesulfovibrio aespoeensis (isolates:1; rSTs:1)
- Pseudodesulfovibrio alkaliphilus (isolates:1; rSTs:1)
- Pseudodesulfovibrio cashew (isolates:1; rSTs:1)
- Pseudodesulfovibrio hydrargyri (isolates:1; rSTs:1)
- Pseudodesulfovibrio indicus (isolates:2; rSTs:1)
- Pseudodesulfovibrio mercurii (isolates:1; rSTs:1)
- Pseudodesulfovibrio piezophilus (isolates:1; rSTs:1)
- Pseudodesulfovibrio portus (isolates:1; rSTs:1)
- Pseudodesulfovibrio profundus (isolates:1; rSTs:1)
- Pseudodesulfovibrio sediminis (isolates:1; rSTs:1)
- Pseudodesulfovibrio senegalensis (isolates:1; rSTs:1)
- Pseudodesulfovibrio sp. (isolates:5; rSTs:4 tree)
- Pseudodesulfovibrio thermohalotolerans (isolates:1; rSTs:1)
- Pseudodesulfovibrio tunisiensis (isolates:1; rSTs:1)
- Salidesulfovibrio (isolates:2; rSTs:2)
- Solidesulfovibrio (isolates:7; rSTs:7 tree)
- Solidesulfovibrio aerotolerans (isolates:1; rSTs:1)
- Solidesulfovibrio alcoholivorans (isolates:1; rSTs:1)
- Solidesulfovibrio carbinolicus (isolates:1; rSTs:1)
- Solidesulfovibrio carbinoliphilus (isolates:1; rSTs:1)
- Solidesulfovibrio fructosivorans (isolates:1; rSTs:1)
- Solidesulfovibrio magneticus (isolates:2; rSTs:2)
- Alkalidesulfovibrio (isolates:1; rSTs:1)
- Desulfovibrionales (isolates:179; rSTs:150 tree)
- Desulfuromonadia (isolates:89; rSTs:78 tree)
- Desulfuromonadales (isolates:30; rSTs:23 tree)
- Desulfuromonadaceae (isolates:15; rSTs:10 tree)
- Geoalkalibacteraceae (isolates:5; rSTs:3 tree)
- Geopsychrobacteraceae (isolates:3; rSTs:3 tree)
- Geothermobacteraceae (isolates:3; rSTs:3 tree)
- Syntrophotaleaceae (isolates:4; rSTs:4 tree)
- Geobacterales (isolates:59; rSTs:55 tree)
- Geobacteraceae (isolates:59; rSTs:55 tree)
- Citrifermentans (isolates:3; rSTs:3 tree)
- Geoanaerobacter (isolates:1; rSTs:1)
- Geoanaerobacter pelophilus (isolates:1; rSTs:1)
- Geobacter (isolates:19; rSTs:17 tree)
- Geobacter anodireducens (isolates:1; rSTs:1)
- Geobacter argillaceus (isolates:1; rSTs:1)
- Geobacter benzoatilyticus (isolates:1; rSTs:1)
- Geobacter grbiciae (isolates:1; rSTs:1)
- Geobacter hydrogenophilus (isolates:2; rSTs:1)
- Geobacter metallireducens (isolates:2; rSTs:2)
- Geobacter pickeringii (isolates:1; rSTs:1)
- Geobacter soli (isolates:1; rSTs:1)
- Geobacter sp. (isolates:1; rSTs:1)
- Geobacter sulfurreducens (isolates:8; rSTs:7 tree)
- Geomesophilobacter (isolates:1; rSTs:1)
- Geomesophilobacter sediminis (isolates:1; rSTs:1)
- Geomobilimonas (isolates:1; rSTs:1)
- Geomobilimonas luticola (isolates:1; rSTs:1)
- Geomonas (isolates:21; rSTs:19 tree)
- Geomonas agri (isolates:1; rSTs:1)
- Geomonas anaerohicana (isolates:1; rSTs:1)
- Geomonas azotofigens (isolates:1; rSTs:1)
- Geomonas diazotrophica (isolates:1; rSTs:1)
- Geomonas edaphica (isolates:1; rSTs:1)
- Geomonas ferrireducens (isolates:1; rSTs:1)
- Geomonas fuzhouensis (isolates:1; rSTs:1)
- Geomonas limicola (isolates:1; rSTs:1)
- Geomonas nitrogeniifigens (isolates:2; rSTs:2)
- Geomonas oryzae (isolates:1; rSTs:1)
- Geomonas oryzisoli (isolates:1; rSTs:1)
- Geomonas paludis (isolates:2; rSTs:2)
- Geomonas propionica (isolates:1; rSTs:1)
- Geomonas silvestris (isolates:1; rSTs:1)
- Geomonas sp. (isolates:2; rSTs:2)
- Geomonas subterranea (isolates:2; rSTs:1)
- Geomonas terrae (isolates:1)
- Geotalea (isolates:4; rSTs:4 tree)
- Oryzomonas (isolates:3; rSTs:3 tree)
- Pelotalea (isolates:1; rSTs:1)
- Pelotalea chapellei (isolates:1; rSTs:1)
- Pelovirga (isolates:1; rSTs:1)
- Pelovirga terrestris (isolates:1; rSTs:1)
- Trichlorobacter (isolates:4; rSTs:4 tree)
- Geobacteraceae (isolates:59; rSTs:55 tree)
- Desulfuromonadales (isolates:30; rSTs:23 tree)
- Dissulfuribacteria (isolates:1; rSTs:1)
- Syntrophia (isolates:7; rSTs:3 tree)
- Syntrophobacteria (isolates:9; rSTs:9 tree)
- Syntrophobacterales (isolates:9; rSTs:9 tree)
- Syntrophobacteraceae (isolates:8; rSTs:8 tree)
- Desulfacinum (isolates:2; rSTs:2)
- Desulfoferrobacter (isolates:1; rSTs:1)
- Desulfoferrobacter suflitae (isolates:1; rSTs:1)
- Desulfoglaeba (isolates:1; rSTs:1)
- Desulfoglaeba alkanexedens (isolates:1; rSTs:1)
- Desulforhabdus (isolates:2; rSTs:2)
- Desulfosoma (isolates:1; rSTs:1)
- Desulfosoma caldarium (isolates:1; rSTs:1)
- Syntrophobacter (isolates:1; rSTs:1)
- Syntrophobacter fumaroxidans (isolates:1; rSTs:1)
- Thermodesulforhabdaceae (isolates:1; rSTs:1)
- Syntrophobacteraceae (isolates:8; rSTs:8 tree)
- Syntrophobacterales (isolates:9; rSTs:9 tree)
- Syntrophorhabdia (isolates:1; rSTs:1)
- Thermodesulfobacteria (isolates:20; rSTs:14 tree)
- Thermodesulfobacteriales (isolates:20; rSTs:14 tree)
- Thermodesulfatatoraceae (isolates:4; rSTs:3 tree)
- Thermodesulfobacteriaceae (isolates:16; rSTs:11 tree)
- Caldimicrobium (isolates:1; rSTs:1)
- Caldimicrobium thiodismutans (isolates:1; rSTs:1)
- Thermodesulfobacterium (isolates:10; rSTs:6 tree)
- Thermodesulfobacterium commune (isolates:4; rSTs:1)
- Thermodesulfobacterium geofontis (isolates:1; rSTs:1)
- Thermodesulfobacterium hveragerdense (isolates:1; rSTs:1)
- Thermodesulfobacterium hydrogeniphilum (isolates:1; rSTs:1)
- Thermodesulfobacterium sp. (isolates:2; rSTs:1)
- Thermodesulfobacterium thermophilum (isolates:1; rSTs:1)
- Thermosulfurimonas (isolates:3; rSTs:3 tree)
- Thermosulfuriphilus (isolates:2; rSTs:1)
- Thermosulfuriphilus ammonigenes (isolates:2; rSTs:1)
- Caldimicrobium (isolates:1; rSTs:1)
- Thermodesulfobacteriales (isolates:20; rSTs:14 tree)
- Thermodesulfobiota (isolates:2; rSTs:2)
- Thermomicrobiota (isolates:6; rSTs:4 tree)
- Thermosulfidibacterota (isolates:1; rSTs:1)
- Thermotogota (isolates:117; rSTs:89 tree)
- Thermotogae (isolates:117; rSTs:89 tree)
- Kosmotogales (isolates:16; rSTs:13 tree)
- Mesoaciditogales (isolates:2; rSTs:2)
- Petrotogales (isolates:34; rSTs:29 tree)
- Petrotogaceae (isolates:34; rSTs:29 tree)
- Defluviitoga (isolates:1; rSTs:1)
- Defluviitoga tunisiensis (isolates:1; rSTs:1)
- Geotoga (isolates:3; rSTs:2)
- Geotoga petraea (isolates:3; rSTs:2)
- Marinitoga (isolates:12; rSTs:12 tree)
- Oceanotoga (isolates:1; rSTs:1)
- Oceanotoga sp. (isolates:1; rSTs:1)
- Petrotoga (isolates:16; rSTs:12 tree)
- Tepiditoga (isolates:1; rSTs:1)
- Tepiditoga spiralis (isolates:1; rSTs:1)
- Defluviitoga (isolates:1; rSTs:1)
- Petrotogaceae (isolates:34; rSTs:29 tree)
- Thermotogales (isolates:65; rSTs:45 tree)
- Fervidobacteriaceae (isolates:30; rSTs:23 tree)
- Fervidobacterium (isolates:10; rSTs:9 tree)
- Fervidobacterium changbaicum (isolates:2; rSTs:1)
- Fervidobacterium gondwanense (isolates:1; rSTs:1)
- Fervidobacterium islandicum (isolates:1; rSTs:1)
- Fervidobacterium nodosum (isolates:1; rSTs:1)
- Fervidobacterium pennivorans (isolates:3; rSTs:3 tree)
- Fervidobacterium sp. (isolates:1; rSTs:1)
- Fervidobacterium thailandense (isolates:1; rSTs:1)
- Thermosipho (isolates:20; rSTs:14 tree)
- Thermosipho affectus (isolates:1; rSTs:1)
- Thermosipho africanus (isolates:3; rSTs:3 tree)
- Thermosipho atlanticus (isolates:1; rSTs:1)
- Thermosipho ferrireducens (isolates:1; rSTs:1)
- Thermosipho globiformans (isolates:1; rSTs:1)
- Thermosipho japonicus (isolates:1; rSTs:1)
- Thermosipho melanesiensis (isolates:7; rSTs:1)
- Thermosipho sp. (isolates:5; rSTs:5 tree)
- Fervidobacterium (isolates:10; rSTs:9 tree)
- Thermotogaceae (isolates:35; rSTs:22 tree)
- Pseudothermotoga (isolates:8; rSTs:4 tree)
- Thermotoga (isolates:27; rSTs:18 tree)
- Thermotoga caldifontis (isolates:1; rSTs:1)
- Thermotoga maritima (isolates:6; rSTs:2)
- Thermotoga naphthophila (isolates:1; rSTs:1)
- Thermotoga neapolitana (isolates:2; rSTs:1)
- Thermotoga petrophila (isolates:1; rSTs:1)
- Thermotoga profunda (isolates:1; rSTs:1)
- Thermotoga sp. (isolates:15; rSTs:11 tree)
- Fervidobacteriaceae (isolates:30; rSTs:23 tree)
- Thermotogae (isolates:117; rSTs:89 tree)
- Verrucomicrobiota (isolates:396; rSTs:188 tree)
- Methylacidiphilae (isolates:15; rSTs:8 tree)
- Methylacidiphilales (isolates:15; rSTs:8 tree)
- Methylacidiphilaceae (isolates:15; rSTs:8 tree)
- Candidatus Methylacidithermus (isolates:1)
- Candidatus Methylacidithermus pantelleriae (isolates:1)
- Methylacidiphilum (ex Ratnadevi et al. 2023) (isolates:14; rSTs:8 tree)
- Candidatus Methylacidiphilum fumarolicum (isolates:8; rSTs:2)
- Candidatus Methylacidiphilum infernorum (isolates:1; rSTs:1)
- Methylacidiphilum caldifontis (isolates:1; rSTs:1)
- Methylacidiphilum infernorum (isolates:1; rSTs:1)
- Methylacidiphilum kamchatkense (isolates:2; rSTs:2)
- Methylacidiphilum sp. (isolates:1; rSTs:1)
- Candidatus Methylacidithermus (isolates:1)
- Methylacidiphilaceae (isolates:15; rSTs:8 tree)
- Methylacidiphilales (isolates:15; rSTs:8 tree)
- Opitutae (isolates:36; rSTs:30 tree)
- Opitutales (isolates:14; rSTs:12 tree)
- Opitutaceae (isolates:14; rSTs:12 tree)
- Candidatus Didemnitutus (isolates:1; rSTs:1)
- Candidatus Didemnitutus mandela (isolates:1; rSTs:1)
- Cephaloticoccus (isolates:2; rSTs:2)
- Ereboglobus (isolates:3; rSTs:3 tree)
- Geminisphaera (isolates:1)
- Geminisphaera colitermitum (isolates:1)
- Horticoccus (isolates:1; rSTs:1)
- Horticoccus luteus (isolates:1; rSTs:1)
- Lacunisphaera (isolates:1; rSTs:1)
- Lacunisphaera limnophila (isolates:1; rSTs:1)
- Nibricoccus (isolates:1; rSTs:1)
- Nibricoccus aquaticus (isolates:1; rSTs:1)
- Oleiharenicola (isolates:1; rSTs:1)
- Oleiharenicola lentus (isolates:1; rSTs:1)
- Opitutus (isolates:1; rSTs:1)
- Opitutus terrae (isolates:1; rSTs:1)
- Rariglobus (isolates:1; rSTs:1)
- Rariglobus hedericola (isolates:1; rSTs:1)
- Termitidicoccus (isolates:1)
- Termitidicoccus mucosus (isolates:1)
- Candidatus Didemnitutus (isolates:1; rSTs:1)
- Opitutaceae (isolates:14; rSTs:12 tree)
- Puniceicoccales (isolates:22; rSTs:18 tree)
- Opitutales (isolates:14; rSTs:12 tree)
- Spartobacteria (isolates:3; rSTs:2)
- Terrimicrobiia (isolates:1; rSTs:1)
- Verrucomicrobiae (isolates:328; rSTs:141 tree)
- Limisphaerales (isolates:3; rSTs:3 tree)
- Verrucomicrobiales (isolates:325; rSTs:138 tree)
- Akkermansiaceae (isolates:292; rSTs:106 tree)
- Rubritaleaceae (isolates:3; rSTs:3 tree)
- Verrucomicrobiaceae (isolates:30; rSTs:29 tree)
- Brevifollis (isolates:1; rSTs:1)
- Brevifollis gellanilyticus (isolates:1; rSTs:1)
- Haloferula (isolates:2; rSTs:2)
- Luteolibacter (isolates:8; rSTs:8 tree)
- Luteolibacter ambystomatis (isolates:1; rSTs:1)
- Luteolibacter arcticus (isolates:1; rSTs:1)
- Luteolibacter flavescens (isolates:1; rSTs:1)
- Luteolibacter luteus (isolates:1; rSTs:1)
- Luteolibacter pohnpeiensis (isolates:1; rSTs:1)
- Luteolibacter rhizosphaerae (isolates:1; rSTs:1)
- Luteolibacter sp. (isolates:1; rSTs:1)
- Luteolibacter yonseiensis (isolates:1; rSTs:1)
- Oceaniferula (isolates:3; rSTs:2)
- Persicirhabdus (isolates:1; rSTs:1)
- Persicirhabdus sediminis (isolates:1; rSTs:1)
- Phragmitibacter (isolates:1; rSTs:1)
- Phragmitibacter flavus (isolates:1; rSTs:1)
- Prosthecobacter (isolates:4; rSTs:4 tree)
- Roseibacillus (isolates:3; rSTs:3 tree)
- Roseimicrobium (isolates:2; rSTs:2)
- Sulfuriroseicoccus (isolates:1; rSTs:1)
- Sulfuriroseicoccus oceanibius (isolates:1; rSTs:1)
- Verrucomicrobium (isolates:4; rSTs:4 tree)
- Brevifollis (isolates:1; rSTs:1)
- Methylacidiphilae (isolates:15; rSTs:8 tree)
- Vulcanimicrobiota (isolates:1)
- candidate division NC10 (isolates:4; rSTs:2 tree)